# terms

id: GO:1903116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of actin filament-based movement.","definition_xrefs":["PMID:24798735","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of actin filament-based movement","termid":"GO:1903115"},{"relation_name":"positively_regulates","term_name":"actin filament-based movement","termid":"GO:0030048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of actin filament-based movement","synonyms":[{"name":"activation of actin filament-based movement","type":"narrow"},{"name":"up regulation of actin filament-based movement","type":"exact"},{"name":"up-regulation of actin filament-based movement","type":"exact"},{"name":"upregulation of actin filament-based movement","type":"exact"}],"termid":"GO:1903116"}


id: GO:0008091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins.","definition_xrefs":["ISBN:0815316194","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0015629","GO:0032991","GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"spectrin","secondary_identifiers":["Wikipedia:Spectrin","NIF_Subcellular:sao536287099"],"termid":"GO:0008091"}


id: MONDO:0003987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare non-Hodgkin or Hodgkin lymphoma that arises in and is confined to the lung at the time of diagnosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"lung cancer","termid":"MONDO:0008903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"lung lymphoma","secondary_identifiers":["MEDGEN:312385","NCIT:C4794","DOID:6760","UMLS:C1704383"],"synonyms":[{"name":"lung lymphoma","type":"exact"},{"name":"lymphoma of lung","type":"exact"},{"name":"lymphoma of the lung","type":"exact"},{"name":"primary lung lymphoma","type":"exact"},{"name":"pulmonary lymphoma","type":"exact"}],"termid":"MONDO:0003987","xrefs":{"Monarch":{"xref_id":"0003987"}}}


id: PBO:0082988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic aspartate aminotransferase involved in nitrogen metabolism; localizes to peroxisomes in oleate-grown cells","termid":"PBO:0082988"}


id: PBO:0036151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_G4_motif_during_vegetative_growth","termid":"PBO:0036151"}


id: GO:0047559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydro-L-gulonate + NAD(P)+ = (4R,5S)-4,5,6-trihydroxy-2,3-dioxohexanoate + NAD(P)H + H+.","definition_xrefs":["MetaCyc:3-DEHYDRO-L-GULONATE-2-DEHYDROGENASE-RXN","EC:1.1.1.130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-dehydro-L-gulonate 2-dehydrogenase activity","synonyms":[{"name":"2,3-diketo-L-gulonate reductase activity","type":"related"},{"name":"3-dehydro-L-gulonate:NAD(P)+ 2-oxidoreductase activity","type":"related"},{"name":"3-keto-L-gulonate dehydrogenase activity","type":"related"},{"name":"3-ketogulonate dehydrogenase activity","type":"related"}],"termid":"GO:0047559"}


id: PBO:0042276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 8 like 2","termid":"PBO:0042276"}


id: PR:Q10499
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An apoptosis-inducing factor 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02144","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis-inducing factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.14c","secondary_identifiers":["UniProtKB:Q10499"],"synonyms":[{"name":"Spom972h-AIFM3","type":"exact"}],"termid":"PR:Q10499"}


id: PBO:0031552
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_peptidase_activity","termid":"PBO:0031552"}


id: FYPO:0003298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of autophosphorylation of one or more specific proteins, or of specific protein sites, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal protein autophosphorylation during vegetative growth","termid":"FYPO:0003019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein autophosphorylation during vegetative growth","synonyms":[{"name":"decreased protein autophosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced protein autophosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003298"}


id: PBO:0060656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor corepressor 2","termid":"PBO:0060656"}


id: GO:2000138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation involved in heart morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000136"},{"relation_name":"positively_regulates","term_name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000138"}


id: MONDO:0011879
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86546],"is_not":false,"summary":null,"term":"MONDO:0011879"}]},"cv_name":"mondo","definition":"Any neuronopathy, distal hereditary motor in which the cause of the disease is a mutation in the DCTN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal hereditary motor neuropathy type 7","termid":"MONDO:0015355"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 7B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:607641","MEDGEN:375157","GARD:18270","MESH:C564362","DOID:0111202","UMLS:C1843315"],"synonyms":[{"name":"DCTN1 neuronopathy, distal hereditary motor","type":"exact"},{"name":"Dhmn7B","type":"related"},{"name":"HMN 7B","type":"related"},{"name":"HMN7B","type":"related"},{"name":"Lower motor neuron disease, dynactin type","type":"related"},{"name":"neuronopathy, distal hereditary motor caused by mutation in DCTN1","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type VIIB","type":"related"},{"name":"neuropathy, distal hereditary motor, type 7B","type":"related"},{"name":"neuropathy, distal hereditary motor, with vocal cord paralysis, type 7B","type":"related"}],"termid":"MONDO:0011879","terms_by_termid":{"MONDO:0011879":null},"xrefs":{"Monarch":{"xref_id":"0011879"}}}


id: PBO:0090070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Cox16","termid":"PBO:0090070"}


id: PBO:0038780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activin A receptor type 2B","termid":"PBO:0038780"}


id: _global:regulates_o_transports_or_maintains_localization_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_o_transports_or_maintains_localization_of","secondary_identifiers":["GOREL:0000038"],"termid":"_global:regulates_o_transports_or_maintains_localization_of"}


id: PBO:0043712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1","termid":"PBO:0043712"}


id: PBO:0087278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3-domain protein located in the bud neck and cytokinetic actin ring; relocalizes from bud neck to nucleus upon DNA replication stress; activates the chitin synthase activity of Chs2p during cytokinesis; suppressor of growth and cytokinesis defects of chs2 phospho-mutants","termid":"PBO:0087278"}


id: PBO:0076456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin 2 pseudogene 2","termid":"PBO:0076456"}


id: MONDO:0030606
data:
  {"annotated_genes":["SJAG_00302","SJAG_03543","SJAG_00335"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87444,87445,87446],"is_not":false,"summary":null,"term":"MONDO:0030606"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Bryant-Li-Bhoj neurodevelopmental syndrome","termid":"MONDO:0031200"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_03543":null},"genotype_count":0,"is_obsolete":false,"name":"Bryant-Li-Bhoj neurodevelopmental syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1801103","UMLS:C5676905","OMIM:619720"],"synonyms":[{"name":"BRYLIB1","type":"exact"}],"termid":"MONDO:0030606","terms_by_termid":{"MONDO:0030606":null},"xrefs":{"Monarch":{"xref_id":"0030606"}}}


id: PBO:0082165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenylosuccinate synthase; catalyzes the first step in synthesis of adenosine monophosphate from inosine 5'monophosphate during purine nucleotide biosynthesis; exhibits binding to single-stranded autonomously replicating (ARS) core sequence","termid":"PBO:0082165"}


id: GO:0030660
data:
  {"annotated_genes":["SJAG_04474","SJAG_01508","SJAG_00192","SJAG_01809","SJAG_04002","SJAG_04569","SJAG_04391","SJAG_00379","SJAG_02282","SJAG_01025","SJAG_02234","SJAG_02482","SJAG_04070","SJAG_02160","SJAG_04517","SJAG_04565","SJAG_04609"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62231,113301,113089,78117],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[65655,58810],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[78397,78743,80246,93571,71249,73877,98774,107435,64397],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[98085,96382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030663"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle associated with the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"Golgi-associated vesicle","termid":"GO:0005798"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00379":null,"SJAG_01025":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_02160":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02482":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"Golgi-associated vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi vesicle membrane","type":"related"}],"termid":"GO:0030660","terms_by_termid":{"GO:0030121":null,"GO:0030126":null,"GO:0030130":null,"GO:0030663":null}}


id: PBO:0076469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport and golgi organization 2 homolog","termid":"PBO:0076469"}


id: MONDO:0005592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dental caries","termid":"MONDO:0005276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smooth surface dental caries","secondary_identifiers":["MEDGEN:1843464","UMLS:C1456145","ICD9:521.07"],"termid":"MONDO:0005592","xrefs":{"Monarch":{"xref_id":"0005592"}}}


id: GO:0033068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of macrolides, any of a large group of polyketide compounds that contain a large lactone ring with few or no double bonds and no nitrogen atoms, linked glycosidically to one or more sugar groups. The macrolides include the carbomycins, the erythromycins, oleandomycin, oligomycins, and the spiramycins, and act as antibiotics, mainly against Gram-positive bacteria.","definition_xrefs":["ISBN:0198506732","PMID:17298179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"macrolide metabolic process","termid":"GO:0033067"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"macrolide biosynthetic process","synonyms":[{"name":"macrolide anabolism","type":"exact"},{"name":"macrolide biosynthesis","type":"exact"},{"name":"macrolide formation","type":"exact"},{"name":"macrolide synthesis","type":"exact"}],"termid":"GO:0033068"}


id: PBO:0083348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene ECM38","termid":"PBO:0083348"}


id: PBO:0048613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 5","termid":"PBO:0048613"}


id: PR:O13752
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane protein 56 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01482","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized TLC domain-containing protein C17A2.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.02c","secondary_identifiers":["UniProtKB:O13752"],"synonyms":[{"name":"Spom972h-TMEM56","type":"exact"}],"termid":"PR:O13752"}


id: PBO:0060131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 32","termid":"PBO:0060131"}


id: PBO:0064887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bbeta","termid":"PBO:0064887"}


id: PBO:0077565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 271","termid":"PBO:0077565"}


id: PBO:0039488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A11, pseudogene","termid":"PBO:0039488"}


id: GO:1900353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methanofuran biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of pteridine metabolic process","termid":"GO:0045864"},{"relation_name":"is_a","term_name":"regulation of methanofuran biosynthetic process","termid":"GO:1900351"},{"relation_name":"is_a","term_name":"positive regulation of methanofuran metabolic process","termid":"GO:1900356"},{"relation_name":"positively_regulates","term_name":"methanofuran biosynthetic process","termid":"GO:2001120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of methanofuran biosynthetic process","synonyms":[{"name":"activation of methanofuran biosynthesis","type":"exact"},{"name":"activation of methanofuran biosynthetic process","type":"narrow"},{"name":"positive regulation of methanofuran biosynthesis","type":"exact"},{"name":"up regulation of methanofuran biosynthesis","type":"exact"},{"name":"up regulation of methanofuran biosynthetic process","type":"exact"},{"name":"up-regulation of methanofuran biosynthesis","type":"exact"},{"name":"up-regulation of methanofuran biosynthetic process","type":"exact"},{"name":"upregulation of methanofuran biosynthesis","type":"exact"},{"name":"upregulation of methanofuran biosynthetic process","type":"exact"}],"termid":"GO:1900353"}


id: _global:encompasses
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"during_which_starts","termid":"_global:during_which_starts"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encompasses","secondary_identifiers":["RO:0002085"],"termid":"_global:encompasses"}


id: MOD:00314
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to glycine cholesterol ester.","definition_xrefs":["RESID:AA0309","Unimod:432#C-term","PubMed:8824192","ChEBI:143135","PubMed:11111088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"glycine cholesterol ester","synonyms":[{"name":"C-cholesterol","type":"related"},{"name":"LIPID Cholesterol glycine ester","type":"exact"},{"name":"cholesterol ester","type":"related"},{"name":"cholesteryl glycinate","type":"exact"},{"name":"glycine cholest-5-en-3beta-ol ester","type":"exact"},{"name":"glycine cholesterol ester","type":"exact"},{"name":"hedgehog lipophilic adduct","type":"exact"}],"termid":"MOD:00314"}


id: MONDO:0970943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, x-linked, 8","secondary_identifiers":["UMLS:C5935568","OMIM:301119","MEDGEN:1858665","DOID:0070599"],"termid":"MONDO:0970943","xrefs":{"Monarch":{"xref_id":"0970943"}}}


id: GO:2000530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of regulation of insulin secretion involved in cellular response to glucose stimulus.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of regulation of insulin secretion involved in cellular response to glucose stimulus (obsolete GO:2000530)","synonyms":[{"name":"positive regulation of regulation of insulin secretion in response to glucose","type":"exact"},{"name":"positive regulation of regulation of insulin secretion involved in cellular response to glucose stimulus","type":"exact"}],"termid":"GO:2000530"}


id: PBO:0080593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 20","termid":"PBO:0080593"}


id: SO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that is found only by individuals that belong to the same pedigree.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pedigree_specific_variant","synonyms":[{"name":"pedigree specific variant","type":"exact"}],"termid":"SO:0001779"}


id: PBO:0060714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 11","termid":"PBO:0060714"}


id: GO:0019599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (R)-4-hydroxymandelate, the anion of (R)-4-hydroxymandelic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"(R)-4-hydroxymandelate metabolic process","termid":"GO:0046431"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(R)-4-hydroxymandelate catabolic process","secondary_identifiers":["MetaCyc:4-HYDROXYMANDELATE-DEGRADATION-PWY"],"synonyms":[{"name":"(R)-4-hydroxymandelate breakdown","type":"exact"},{"name":"(R)-4-hydroxymandelate catabolism","type":"exact"},{"name":"(R)-4-hydroxymandelate degradation","type":"exact"}],"termid":"GO:0019599"}


id: PBO:0051310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-2 (pseudogene)","termid":"PBO:0051310"}


id: PBO:0064890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bdelta","termid":"PBO:0064890"}


id: GO:0090613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'deoxyadenosine + H2O = 5'deoxyinosine + NH3.","definition_xrefs":["RHEA:42892","PMID:23968233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"5'-deoxyadenosine deaminase activity","secondary_identifiers":["EC:3.5.4.41"],"termid":"GO:0090613"}


id: PBO:0062371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 10","termid":"PBO:0062371"}


id: PBO:0061846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Obg like ATPase 1","termid":"PBO:0061846"}


id: GO:0141063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of epigenetic modifications (imprints) in a plant central cell, leading to an asymmetry between the two maternal alleles and the paternal allele, and differential expression of the corresponding alleles in the developing endosperm. This can happen through heterochromatin formation or differential chromatin loop formation.","definition_xrefs":["PMID:28118754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic imprinting","termid":"GO:0071514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"epigenetic programming in the central cell","termid":"GO:0141063"}


id: MONDO:0001639
data:
  {"annotated_genes":["SJAG_04425","SJAG_01199","SJAG_04042","SJAG_03447","SJAG_04459","SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[85602,85601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[86211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[87031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[85447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_01199":null,"SJAG_03447":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"deficiency anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:281.9","UMLS:C0041782","MEDGEN:508256","ICD9:281.8","SCTID:267513007","DOID:13121"],"synonyms":[{"name":"deficiency anemias","type":"exact"},{"name":"unspecified deficiency anaemia","type":"exact"},{"name":"unspecified deficiency anemia","type":"exact"}],"termid":"MONDO:0001639","terms_by_termid":{"MONDO:0008787":null,"MONDO:0009238":null,"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0010184":null},"xrefs":{"Monarch":{"xref_id":"0001639"}}}


id: PBO:0033789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_kinetochore_microtubule_depolymerization_during_mitotic_metaphase_chromosome_recapture","termid":"PBO:0033789"}


id: MONDO:0001858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic painful nonsuppurative swellings of one or more costal cartilages, especially of the second rib. The anterior chest pain may mimic that of coronary artery disease.","definition_xrefs":["MESH:D013991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tietze syndrome","secondary_identifiers":["DOID:14021","ICD9:733.6","SCTID:30128009","UMLS:C0040213","MEDGEN:52753","NCIT:C168333"],"synonyms":[{"name":"Chondropathia tuberosa","type":"related"},{"name":"Costalchondritis","type":"exact"},{"name":"Costochondritis","type":"exact"},{"name":"Tietze syndrome","type":"exact"},{"name":"Tietze's disease","type":"exact"},{"name":"Tietze's syndrome","type":"exact"},{"name":"costochondral joint syndromic disease","type":"exact"},{"name":"costochondral junction syndrome","type":"exact"},{"name":"slipping rib syndrome","type":"exact"},{"name":"syndromic disease of costochondral joint","type":"exact"}],"termid":"MONDO:0001858","xrefs":{"Monarch":{"xref_id":"0001858"}}}


id: MONDO:0013897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Loeys-Dietz syndrome in which the cause of the disease is a mutation in the TGFB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Loeys-Dietz syndrome","termid":"MONDO:0018954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Loeys-Dietz syndrome 4","secondary_identifiers":["GARD:10588","OMIM:614816","MEDGEN:766676","UMLS:C3553762","DOID:0070233"],"synonyms":[{"name":"LDS4","type":"related"},{"name":"Loeys-Dietz syndrome 4","type":"exact"},{"name":"Loeys-Dietz syndrome caused by mutation in TGFB2","type":"exact"},{"name":"Loeys-Dietz syndrome type 4","type":"exact"},{"name":"TGFB2 Loeys-Dietz syndrome","type":"exact"},{"name":"aneurysm, aortic and cerebral, with arterial tortuosity and skeletal manifestations","type":"related"}],"termid":"MONDO:0013897","xrefs":{"Monarch":{"xref_id":"0013897"}}}


id: PATO:0001665
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being located near a surface.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superficial","secondary_identifiers":["PATO:0001471"],"synonyms":[{"name":"superficial to","type":"exact"}],"termid":"PATO:0001665"}


id: PBO:0013118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex subunit Spf38","termid":"PBO:0013118"}


id: GO:0021656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 2. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 2 morphogenesis","termid":"GO:0021655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 2 structural organization","synonyms":[{"name":"rhombomere 2 structural organisation","type":"exact"}],"termid":"GO:0021656"}


id: GO:0018244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The glycosylation of protein via peptidyl-tryptophan, 1'-glycosyl-L-tryptophan; results in the formation of an (S)-2-amino-3-(1-D-mannopyranosyloxy-1H-indol-3-yl)propanoic acid residue.","definition_xrefs":["RESID:AA0156"],"gene_count":0,"genotype_count":0,"name":"obsolete protein N-linked glycosylation via tryptophan (obsolete GO:0018244)","termid":"GO:0018244"}


id: GO:0016819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid anhydride which contains a sulfonyl group, -SO2-.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides","termid":"GO:0016817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides","secondary_identifiers":["EC:3.6.2.-"],"synonyms":[{"name":"hydrolase activity, acting on acid anhydrides, in sulphonyl-containing anhydrides","type":"exact"}],"termid":"GO:0016819"}


id: PBO:0027773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_4-amino-1-methyl-1H-imidazole-5-carboselenoamide","termid":"PBO:0027773"}


id: PBO:0069584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 858, pseudogene","termid":"PBO:0069584"}


id: PBO:0001269
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name derived from human ortholog MZT1","termid":"PBO:0001269"}


id: PBO:0078172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-3","termid":"PBO:0078172"}


id: GO:0034105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tissue remodeling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tissue remodeling","synonyms":[{"name":"positive regulation of tissue remodelling","type":"exact"}],"termid":"GO:0034105"}


id: FYPO:0002945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is in G0 phase is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"},{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during G0","synonyms":[{"name":"increased RNA accumulation during G0","type":"related"},{"name":"increased RNA level during cell quiescence","type":"exact"},{"name":"increased RNA level during quiescence","type":"exact"},{"name":"increased transcript level during G0","type":"exact"}],"termid":"FYPO:0002945"}


id: PBO:0050294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine N-methyltransferase","termid":"PBO:0050294"}


id: PBO:0044038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 10","termid":"PBO:0044038"}


id: PBO:0058007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3934","termid":"PBO:0058007"}


id: PR:Q10352
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F12.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F12.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.10c","synonyms":[{"name":"Spom972h-SPAC1F12.10c","type":"exact"}],"termid":"PR:Q10352"}


id: PBO:0046966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM83C antisense RNA 1","termid":"PBO:0046966"}


id: GO:0098974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins in the postsynaptic actin cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton organization","termid":"GO:0099188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"postsynaptic actin cytoskeleton organization","termid":"GO:0098974"}


id: GO:0004573
data:
  {"annotated_genes":["SJAG_04363"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79267],"is_not":false,"summary":null,"term":"GO:0004573"}]},"cv_name":"molecular_function","definition":"Catalysis of the exohydrolysis of the non-reducing terminal glucose residue in the mannosyl-oligosaccharide Glc(3)Man(9)GlcNAc(2).","definition_xrefs":["EC:3.2.1.106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"Glc3Man9GlcNAc2 oligosaccharide glucosidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-4793947","Reactome:R-HSA-9694364","RHEA:55988","Reactome:R-HSA-532678","MetaCyc:3.2.1.106-RXN"],"synonyms":[{"name":"mannosyl-oligosaccharide glucohydrolase activity","type":"related"},{"name":"mannosyl-oligosaccharide glucosidase (processing A-glucosidase I) activity","type":"exact"},{"name":"mannosyl-oligosaccharide glucosidase activity","type":"related"},{"name":"processing A-glucosidase I activity","type":"related"},{"name":"trimming glucosidase I","type":"exact"}],"termid":"GO:0004573","terms_by_termid":{"GO:0004573":null}}


id: PR:P79016
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1902 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S19-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC649.02","synonyms":[{"name":"S16-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps1902","type":"exact"}],"termid":"PR:P79016"}


id: PBO:0059469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"musashi RNA binding protein 1","termid":"PBO:0059469"}


id: GO:0050153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-hydroxydecanoate + NAD+ = 10-oxodecanoate + H+ + NADH.","definition_xrefs":["EC:1.1.1.66","RHEA:20880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"omega-hydroxydecanoate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03886","MetaCyc:OMEGA-HYDROXYDECANOATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"10-hydroxydecanoate:NAD+ 10-oxidoreductase activity","type":"related"},{"name":"w-hydroxydecanoate dehydrogenase activity","type":"exact"}],"termid":"GO:0050153"}


id: FYPO:0007391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which an aneuploid spore is unable to survive under conditions in which wild type spores survive. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah","PMID:22737087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable aneuploid spore","synonyms":[{"name":"abolished aneuploid spore germination","type":"exact"},{"name":"aneuploid spore germination abolished","type":"exact"},{"name":"decreased aneuploid spore viability","type":"exact"},{"name":"decreased viability of aneuploid cells","type":"related"},{"name":"decreased viability of aneuploid spores","type":"related"},{"name":"lethal in aneuploid spore","type":"related"}],"termid":"FYPO:0007391"}


id: MONDO:0007509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant hypohidrotic ectodermal dysplasia","termid":"MONDO:0015884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 10A, hypohidrotic/hair/nail type, autosomal dominant","secondary_identifiers":["DOID:0111663","GARD:18591","UMLS:C3888065","MEDGEN:854747","OMIM:129490"],"synonyms":[{"name":"ECTD10A","type":"related"},{"name":"ectodermal dysplasia 10A, hypohidrotic/hair/nail type, autosomal dominant","type":"exact"},{"name":"ectodermal dysplasia hypohidrotic autosomal dominant","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic, autosomal dominant","type":"related"},{"name":"hypohidrotic ectodermal dysplasia autosomal dominant","type":"related"}],"termid":"MONDO:0007509","xrefs":{"Monarch":{"xref_id":"0007509"}}}


id: PBO:0044334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 17","termid":"PBO:0044334"}


id: MONDO:0007727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A periodic fever syndrome, characterized by recurrent fever, arthralgia, myalgia and tender skin lesions lasting for 1 to 3 weeks, associated with skin, joint, ocular and serosal inflammation and complicated by secondary amyloidosis.","definition_xrefs":["Orphanet:32960"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autoimmune disease","termid":"MONDO:0007179"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hereditary periodic fever syndrome","termid":"MONDO:0017953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autosomal dominant familial periodic fever","secondary_identifiers":["NCIT:C119051","NANDO:1200472","DOID:0090018","icd11.foundation:1869883509","MESH:C536657","NORD:1804","SCTID:403833009","GARD:8457","MEDGEN:226899","NANDO:2200433","OMIM:142680","UMLS:C1275126"],"synonyms":[{"name":"FHF","type":"exact"},{"name":"FPF","type":"related"},{"name":"Hibernian fever, familial","type":"exact"},{"name":"TNF receptor 1-associated periodic fever syndrome","type":"exact"},{"name":"TNF receptor 1-associated periodic syndrome","type":"exact"},{"name":"TNF receptor-associated periodic syndrome","type":"exact"},{"name":"TRAPS","type":"exact"},{"name":"TRAPS syndrome","type":"exact"},{"name":"Tumor Necrosis Factor Receptor-Associated Periodic Syndrome","type":"exact"},{"name":"familial Hibernian fever","type":"exact"},{"name":"periodic FEVER, familial, autosomal dominant","type":"related"},{"name":"tumor necrosis factor receptor 1 associated periodic syndrome","type":"exact"},{"name":"tumor necrosis factor receptor 1-associated periodic syndrome","type":"exact"},{"name":"tumor necrosis factor receptor-associated periodic syndrome","type":"exact"},{"name":"tumour necrosis factor receptor 1 associated periodic syndrome","type":"exact"},{"name":"tumour necrosis factor receptor 1-associated periodic syndrome","type":"exact"},{"name":"tumour necrosis factor receptor-associated periodic syndrome","type":"exact"}],"termid":"MONDO:0007727","xrefs":{"Monarch":{"xref_id":"0007727"}}}


id: MONDO:0013667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myelodysplastic syndrome (obsolete MONDO:0013667)","termid":"MONDO:0013667","xrefs":{"Monarch":{"xref_id":"0013667"}}}


id: GO:0016579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more ubiquitin groups from a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein removal","termid":"GO:0070646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein deubiquitination","secondary_identifiers":["Reactome:R-HSA-5688426","GO:0006514"],"synonyms":[{"name":"deubiquitination","type":"exact"},{"name":"protein deubiquitinylation","type":"exact"},{"name":"protein deubiquitylation","type":"exact"}],"termid":"GO:0016579"}


id: GO:0045831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of light-activated channel activity.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of light-activated channel activity (obsolete GO:0045831)","synonyms":[{"name":"down regulation of light-activated channel activity","type":"exact"},{"name":"down-regulation of light-activated channel activity","type":"exact"},{"name":"downregulation of light-activated channel activity","type":"exact"},{"name":"inhibition of light-activated channel activity","type":"narrow"}],"termid":"GO:0045831"}


id: GO:0002362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a CD4-positive, CD25-positive, alpha-beta regulatory T cell.","definition_xrefs":["PMID:15207821","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell lineage commitment","termid":"GO:0043373"},{"relation_name":"part_of","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment","synonyms":[{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte lineage commitment","type":"exact"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-cell lineage commitment","type":"exact"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002362"}


id: FYPO:0003671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ATP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ATP binding","termid":"FYPO:0003671"}


id: PBO:0081529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 439","termid":"PBO:0081529"}


id: PBO:0113117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enolase II, a phosphopyruvate hydratase; catalyzes conversion of 2-phosphoglycerate to phosphoenolpyruvate during glycolysis and the reverse reaction during gluconeogenesis; mRNA is asymmetrically distributed to daughter cells in a Sir2p-dependent manner, and asymmetry is lost during replicative aging; expression induced in response to glucose; ENO2 has a paralog, ENO1, that arose from the whole genome duplication","termid":"PBO:0113117"}


id: MONDO:0011158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune lymphoproliferative syndrome","termid":"MONDO:0017979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune lymphoproliferative syndrome type 1","secondary_identifiers":["UMLS:C1328840","ICD9:279.41","OMIM:601859","MEDGEN:231300","SCTID:702444009"],"synonyms":[{"name":"ALPS","type":"related"},{"name":"Canale-Smith syndrome","type":"related"},{"name":"autoimmune lymphoproliferative syndrome","type":"related"},{"name":"autoimmune lymphoproliferative syndrome type 1","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome, type 1A","type":"narrow"},{"name":"autoimmune lymphoproliferative syndrome, type 1B","type":"narrow"},{"name":"autoimmune lymphoproliferative syndrome, type I, autosomal dominant","type":"related"},{"name":"autoimmune lymphoproliferative syndrome, type I, autosomal recessive","type":"related"},{"name":"autoimmune lymphoproliferative syndrome, type IA","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome, type IB","type":"exact"}],"termid":"MONDO:0011158","xrefs":{"Monarch":{"xref_id":"0011158"}}}


id: PBO:0001576
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human Ini1","termid":"PBO:0001576"}


id: PBO:0048064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 13","termid":"PBO:0048064"}


id: PBO:0052070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 14","termid":"PBO:0052070"}


id: MONDO:0021952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune progesterone dermatitis (APD) is primarily characterized by a recurrent skin rash that varies in severity depending on the phase of the menstrual cycle. The rash generally appears during the second half of the cycle when levels of the hormone, progesterone, begin to rise and it subsides shortly after menstruation. Although the exact underlying cause of APD is not well understood, it is thought to involve an abnormal immune reaction (autoimmune response) triggered by a woman's own progesterone. Depending on the severity of the condition, treatment may include topical (applied to the skin) medications, systemic corticosteroids, hormone therapy to suppress the production of progesterone, and/or surgical removal of the ovaries.","definition_xrefs":["GARD:0009139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune progesterone dermatitis","secondary_identifiers":["SCTID:400009001","MESH:C535299","ICD9:708.8","MEDGEN:220359","UMLS:C1260879"],"synonyms":[{"name":"APD","type":"related"},{"name":"autoimmune progesterone dermatitis","type":"exact"},{"name":"autoimmune progesterone dermatitis/urticaria","type":"exact"},{"name":"autoimmune progesterone urticaria","type":"related"},{"name":"progesterone dermatitis","type":"related"}],"termid":"MONDO:0021952","xrefs":{"Monarch":{"xref_id":"0021952"}}}


id: PBO:0001253
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.1","termid":"PBO:0001253"}


id: FYPO:0003535
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119873],"is_not":false,"summary":null,"term":"FYPO:0003535"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the bipolar index is lower than normal. The bipolar index is the proportion of the population undergoing bipolar growth at any given time.","definition_xrefs":["PMID:20501954","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":1,"genotypes_by_uniquename":{"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased bipolar index","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta"],"synonyms":[{"name":"decreased frequency of bipolar growth polarity","type":"related"},{"name":"decreased number of cells undergoing bipolar growth","type":"exact"},{"name":"reduced bipolar index","type":"exact"}],"termid":"FYPO:0003535","terms_by_termid":{"FYECO:0000162":null,"FYPO:0003535":null}}


id: PBO:0074115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 1","termid":"PBO:0074115"}


id: GO:0051592
data:
  {"annotated_genes":["SJAG_01233","SJAG_03799","SJAG_03631","SJAG_03879","SJAG_02858","SJAG_04454"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116429,113666,101311,110469,114982,98432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071277"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01233":null,"SJAG_02858":null,"SJAG_03631":null,"SJAG_03799":null,"SJAG_03879":null,"SJAG_04454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to calcium ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to Ca2+ ion","type":"exact"}],"termid":"GO:0051592","terms_by_termid":{"GO:0071277":null}}


id: PBO:0046365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 2","termid":"PBO:0046365"}


id: PATO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having extra or fewer parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"has number of","termid":"PATO:0001555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"altered number of","termid":"PATO:0002083"}


id: PBO:0034668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_monopolar_protein_localization_to_cell_tip","termid":"PBO:0034668"}


id: PBO:0072258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 33","termid":"PBO:0072258"}


id: PATO:0001571
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in a bearer by virtue of the bearer's being made wider or larger in all dimensions.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilated","termid":"PATO:0001571"}


id: GO:0008837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: LL-2,6-diaminopimelate = meso-2,6-diaminopimelate.","definition_xrefs":["RHEA:15393","EC:5.1.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diaminopimelate epimerase activity","secondary_identifiers":["KEGG_REACTION:R02735","MetaCyc:DIAMINOPIMEPIM-RXN"],"synonyms":[{"name":"LL-2,6-diaminoheptanedioate 2-epimerase activity","type":"related"}],"termid":"GO:0008837"}


id: PBO:0042005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 60","termid":"PBO:0042005"}


id: MONDO:0017164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemolytic disease of the newborn with Kell alloimmunization","secondary_identifiers":["Orphanet:275944","GARD:21038","MEDGEN:632769","UMLS:C0472751"],"synonyms":[{"name":"anti-K HDN","type":"exact"},{"name":"maternal anti-Kell alloimmunization","type":"exact"}],"termid":"MONDO:0017164","xrefs":{"Monarch":{"xref_id":"0017164"}}}


id: PBO:0073829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 6","termid":"PBO:0073829"}


id: SO:0001628
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located in the intergenic region, between genes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:intergenic","type":"related"},{"name":"Jannovar:intergenic_variant","type":"exact"},{"name":"Seattleseq:intergenic","type":"exact"},{"name":"VEP:intergenic_variant","type":"exact"},{"name":"intergenic","type":"exact"},{"name":"intergenic variant","type":"exact"},{"name":"snpEff:INTERGENIC","type":"exact"}],"termid":"SO:0001628"}


id: PBO:0042457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 45","termid":"PBO:0042457"}


id: PBO:0076558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 2","termid":"PBO:0076558"}


id: MONDO:1010983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in yellow-crowned parrot.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, yellow-crowned parrot","secondary_identifiers":["OMIA:000487-151761"],"termid":"MONDO:1010983","xrefs":{"Monarch":{"xref_id":"1010983"}}}


id: GO:0072717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an actinomycin D stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to antibiotic","termid":"GO:0071236"},{"relation_name":"is_a","term_name":"response to actinomycin D","termid":"GO:0072716"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to actinomycin D","termid":"GO:0072717"}


id: PBO:0050044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA-F antisense RNA 1","termid":"PBO:0050044"}


id: FYPO:0008059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to K48-linked polyubiquitin occurs to a lower extent than normal.","definition_xrefs":["PMID:16138082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"decreased K48-linked polyubiquitin binding","synonyms":[{"name":"decreased K48-linked polyUb binding","type":"exact"}],"termid":"FYPO:0008059"}


id: GO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the diameter of a blood vessel via the renin-angiotensin system.","definition_xrefs":["PMID:10425188","GOC:pr","ISBN:0323031951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"},{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"},{"relation_name":"part_of","term_name":"maintenance of blood vessel diameter homeostasis by renin-angiotensin","termid":"GO:0002034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiotensin-mediated vasodilation involved in regulation of systemic arterial blood pressure","synonyms":[{"name":"vasodilation by angiotensin involved in regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0002033"}


id: GO:0005496
data:
  {"annotated_genes":["SJAG_04018","SJAG_02982","SJAG_01722","SJAG_01590","SJAG_03718","SJAG_00355","SJAG_02375","SJAG_02323","SJAG_00054","SJAG_01329","SJAG_01407"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94976],"is_not":false,"summary":null,"term":"GO:0005496"},{"annotations":[108518,111639,71334,72557,94588,116525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008142"},{"annotations":[63983,77301,62348,90765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032934"}]},"cv_name":"molecular_function","definition":"Binding to a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00355":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02982":null,"SJAG_03718":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"steroid binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005496","terms_by_termid":{"GO:0005496":null,"GO:0008142":null,"GO:0032934":null}}


id: PBO:0078464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-2","termid":"PBO:0078464"}


id: PBO:0090707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP Rga5","termid":"PBO:0090707"}


id: GO:0043450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n.","definition_xrefs":["GOC:jl","Wikipedia:Alkene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"},{"relation_name":"is_a","term_name":"olefin biosynthetic process","termid":"GO:1900674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkene biosynthetic process","synonyms":[{"name":"alkene anabolism","type":"exact"},{"name":"alkene biosynthesis","type":"exact"},{"name":"alkene formation","type":"exact"},{"name":"alkene synthesis","type":"exact"}],"termid":"GO:0043450"}


id: GO:0003130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to heart induction.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in heart induction (obsolete GO:0003130)","synonyms":[{"name":"BMP signalling pathway involved in heart induction","type":"exact"}],"termid":"GO:0003130"}


id: PBO:0051003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin (CD79A) binding protein 1 family member C","termid":"PBO:0051003"}


id: GO:0008875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + NADP+ = dehydro-D-gluconate + NADPH + H+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"gluconate dehydrogenase activity","termid":"GO:0008875"}


id: GO:0046448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tropane alkaloids, compounds containing the 8-methyl-8-azabicyclo(3.2.1)octane ring system.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tropane alkaloid metabolic process","synonyms":[{"name":"tropane alkaloid metabolism","type":"exact"}],"termid":"GO:0046448"}


id: GO:1903599
data:
  {"annotated_genes":["SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69289],"is_not":false,"summary":null,"term":"GO:1903599"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrion degradation by autophagy.","definition_xrefs":["GOC:autophagy","GOC:TermGenie","PMID:21753002","GOC:pad","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of autophagy","termid":"GO:0010508"},{"relation_name":"is_a","term_name":"regulation of autophagy of mitochondrion","termid":"GO:1903146"},{"relation_name":"positively_regulates","term_name":"autophagy of mitochondrion","termid":"GO:0000422"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of autophagy of mitochondrion","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"activation of mitochondrion degradation","type":"related"},{"name":"activation of mitophagy","type":"narrow"},{"name":"positive regulation of mitochondrial degradation","type":"broad"},{"name":"up regulation of mitochondrion degradation","type":"broad"},{"name":"up regulation of mitophagy","type":"exact"},{"name":"up-regulation of mitochondrion degradation","type":"broad"},{"name":"up-regulation of mitophagy","type":"exact"},{"name":"upregulation of mitochondrion degradation","type":"broad"},{"name":"upregulation of mitophagy","type":"exact"}],"termid":"GO:1903599","terms_by_termid":{"GO:1903599":null}}


id: GO:1901507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of acylglycerol transport.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"regulation of acylglycerol transport","termid":"GO:1901506"},{"relation_name":"negatively_regulates","term_name":"acylglycerol transport","termid":"GO:0034196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of acylglycerol transport","synonyms":[{"name":"down regulation of acylglycerol transport","type":"exact"},{"name":"down regulation of glyceride transport","type":"exact"},{"name":"down-regulation of acylglycerol transport","type":"exact"},{"name":"down-regulation of glyceride transport","type":"exact"},{"name":"downregulation of acylglycerol transport","type":"exact"},{"name":"downregulation of glyceride transport","type":"exact"},{"name":"inhibition of acylglycerol transport","type":"narrow"},{"name":"inhibition of glyceride transport","type":"narrow"},{"name":"negative regulation of glyceride transport","type":"exact"}],"termid":"GO:1901507"}


id: GO:0061408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to heat stress (obsolete GO:0061408)","termid":"GO:0061408"}


id: GO:0070001
data:
  {"annotated_genes":["SJAG_00109","SJAG_01968","SJAG_03763","SJAG_02260","SJAG_03420","SJAG_04583","SJAG_00784","SJAG_00254"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042500"},{"annotations":[60244,69439,76290,70170,72209,73520,80178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004190"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00109":null,"SJAG_00254":null,"SJAG_00784":null,"SJAG_01968":null,"SJAG_02260":null,"SJAG_03420":null,"SJAG_03763":null,"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0008233","GO:0140096","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"aspartic-type peptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0070001","terms_by_termid":{"GO:0004190":null,"GO:0042500":null}}


id: PATO:0000054
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000054 absolute number (obsolete PATO:0000054)","termid":"PATO:0000054"}


id: PBO:0027926
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_nitrogen_starvation_in_h-_cells","termid":"PBO:0027926"}


id: PBO:0029573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_abnormal_morphology","termid":"PBO:0029573"}


id: MOD:01264
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:270#C","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addtion to cytopiloyne","termid":"MOD:00590"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"nucleophilic addtion to cytopiloyne - site C","synonyms":[{"name":"Cytopiloyne","type":"related"},{"name":"nucleophilic addtion to cytopiloyne","type":"related"}],"termid":"MOD:01264"}


id: MONDO:0005668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypersensitivity granulomatous pneumonitis caused by the inhalation of avian antigens that are present in the dust of the droppings and feathers of many species of birds. In the acute phase it manifests as fever, chills, dyspnea, cough, and chest tightness. Chronic exposure may lead to interstitial lung fibrosis.","definition_xrefs":["NCIT:C34425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"},{"relation_name":"is_a","term_name":"occupational lung disease","termid":"MONDO:0022736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"bird fancier's lung","secondary_identifiers":["SCTID:69339004","UMLS:C0005592","MEDGEN:586","ICD10CM:J67.2","GARD:16924","DOID:13891","icd11.foundation:912113736","ICD9:495.2","Orphanet:99908","MedDRA:10004941","MESH:D001716"],"synonyms":[{"name":"Avian hypersensitivity pneumonitis","type":"exact"},{"name":"bird breeder's lung","type":"exact"},{"name":"bird fancier lung","type":"exact"},{"name":"bird fancier's lung","type":"exact"},{"name":"bird-breeder's lung","type":"related"},{"name":"bird-fancier's lung","type":"exact"},{"name":"bird-fanciers' lung","type":"exact"},{"name":"pigeon breeder's lung","type":"exact"},{"name":"pigeon-breeder lung disease","type":"exact"},{"name":"pigeon-breeder's lung","type":"exact"},{"name":"poultry worker's lung","type":"related"}],"termid":"MONDO:0005668","xrefs":{"Monarch":{"xref_id":"0005668"}}}


id: PBO:0071031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 33","termid":"PBO:0071031"}


id: PBO:0033752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sister_chromatid_meiotic_recombination","termid":"PBO:0033752"}


id: GO:0018288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tetrakis-L-cysteinyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0140"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tetrakis-L-cysteinyl tetrairon tetrasulfide (obsolete GO:0018288)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tetrakis-L-cysteinyl tetrairon tetrasulphide","type":"exact"}],"termid":"GO:0018288"}


id: PBO:0090488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family membrane adaptor Mug170","termid":"PBO:0090488"}


id: GO:0141034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that disrupts the host actin cytoskeleton by inhibiting host actin from polymerizing. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30297616","PMID:23409096","PMID:24253566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host actin cytoskeleton","termid":"GO:0141027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton via inhibition of actin polymerization","synonyms":[{"name":"perturbation by symbiont of host actin cytoskeleton via inhibition of actin polymerization","type":"exact"}],"termid":"GO:0141034"}


id: PBO:0078526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 16 like","termid":"PBO:0078526"}


id: PBO:0028824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton_morphology","termid":"PBO:0028824"}


id: FYPO:0005182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased when the cell is exposed to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein degradation during cellular response to UV","synonyms":[{"name":"decreased protein breakdown during cellular response to UV","type":"exact"},{"name":"decreased protein catabolic process during cellular response to UV","type":"exact"},{"name":"decreased protein catabolism during cellular response to UV","type":"exact"},{"name":"decreased protein degradation during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"decreased protein degradation during cellular response to UV during vegetative growth","type":"exact"},{"name":"decreased protein degradation during cellular response to ultraviolet light","type":"exact"},{"name":"reduced protein degradation during cellular response to UV","type":"exact"}],"termid":"FYPO:0005182"}


id: MONDO:1010453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conotruncal heart malformations that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conotruncal heart malformations, non-human animal","termid":"MONDO:1010012"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conotruncal heart malformations, dog","secondary_identifiers":["OMIA:000224-9615"],"termid":"MONDO:1010453","xrefs":{"Monarch":{"xref_id":"1010453"}}}


id: GO:0048615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anterior midgut (ectodermal) are generated and organized, during the embryonic phase.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"anterior midgut (ectodermal) morphogenesis","termid":"GO:0007441"},{"relation_name":"part_of","term_name":"embryonic ectodermal digestive tract morphogenesis","termid":"GO:0048613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic anterior midgut (ectodermal) morphogenesis","termid":"GO:0048615"}


id: GO:0051255
data:
  {"annotated_genes":["SJAG_03073","SJAG_04841","SJAG_01613","SJAG_01215","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99555,97613,109166,95113,77543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051256"}]},"cv_name":"biological_process","definition":"The cell cycle process in which aggregation, arrangement and bonding together of a set of components to form the spindle midzone. The spindle midzone is the area in the center of the spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PMID:15296749","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"spindle assembly","termid":"GO:0051225"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_01613":null,"SJAG_03073":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"spindle midzone assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"spindle midzone biogenesis","type":"exact"},{"name":"spindle midzone biosynthesis","type":"exact"},{"name":"spindle midzone formation","type":"exact"}],"termid":"GO:0051255","terms_by_termid":{"GO:0051256":null}}


id: GO:0031779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a melanocortin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"melanocortin receptor binding","synonyms":[{"name":"melanocortin receptor ligand","type":"narrow"}],"termid":"GO:0031779"}


id: PBO:0031650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G1_phase_progression","termid":"PBO:0031650"}


id: PBO:0027381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_pore_distribution","termid":"PBO:0027381"}


id: PBO:0070339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 11","termid":"PBO:0070339"}


id: PBO:0054044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1385","termid":"PBO:0054044"}


id: GO:0141095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A retrotransposon silencing mechanism in which a methylated cytosine residues in the genome promote heterochromatin assembly. Heterochromatin is a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:15318244"],"gene_count":0,"genotype_count":0,"name":"obsolete retrotransposon silencing by DNA methylation-dependent heterochromatin formation (obsolete GO:0141095)","termid":"GO:0141095"}


id: GO:0071293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tellurium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tellurium ion","termid":"GO:0046690"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tellurium ion","synonyms":[{"name":"cellular response to tellurium","type":"exact"}],"termid":"GO:0071293"}


id: MOD:00578
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetaldehyde +28","synonyms":[{"name":"Acetaldehyde +28","type":"related"},{"name":"Delta:H(4)C(2)","type":"related"}],"termid":"MOD:00578"}


id: PBO:0057813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3134","termid":"PBO:0057813"}


id: GO:1902436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of male mating behavior.","definition_xrefs":["PMID:24089208","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"regulation of male mating behavior","termid":"GO:1902435"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of male mating behavior","synonyms":[{"name":"down regulation of male mating behavior","type":"exact"},{"name":"down-regulation of male mating behavior","type":"exact"},{"name":"downregulation of male mating behavior","type":"exact"},{"name":"inhibition of male mating behavior","type":"narrow"}],"termid":"GO:1902436"}


id: PBO:0083953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-tubulin; involved in nucleating microtubules from both the cytoplasmic and nuclear faces of the spindle pole body; protein abundance increases in response to DNA replication stress; null mutation is complemented by human TUBG1","termid":"PBO:0083953"}


id: PBO:0001643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid dehydrogenase (predicted)","termid":"PBO:0001643"}


id: GO:1902854
data:
  {"annotated_genes":["SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94752],"is_not":false,"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nuclear migration during mitotic telophase.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclear migration along microtubule","termid":"GO:1902840"},{"relation_name":"is_a","term_name":"regulation of nuclear migration during mitotic telophase","termid":"GO:1902852"},{"relation_name":"positively_regulates","term_name":"nuclear migration during mitotic telophase","termid":"GO:0090561"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nuclear migration during mitotic telophase","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of nuclear migration during mitotic telophase","type":"narrow"},{"name":"up regulation of nuclear migration during mitotic telophase","type":"exact"},{"name":"up-regulation of nuclear migration during mitotic telophase","type":"exact"},{"name":"upregulation of nuclear migration during mitotic telophase","type":"exact"}],"termid":"GO:1902854","terms_by_termid":{"GO:1902854":null}}


id: GO:0010280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucose + NADPH + H+ = UDP-L-rhamnose + NADP+ + H2O.","definition_xrefs":["MetaCyc:RXN-5482","PMID:14701918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"UDP-L-rhamnose synthase activity","synonyms":[{"name":"UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase-4-reductase activity","type":"narrow"}],"termid":"GO:0010280"}


id: GO:0003913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the repair of a photoproduct resulting from ultraviolet irradiation of two adjacent pyrimidine residues in DNA.","definition_xrefs":["PMID:11124949","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"DNA photolyase activity","termid":"GO:0003913"}


id: GO:1901395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transforming growth factor beta2 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta2 activation (obsolete GO:1901395)","synonyms":[{"name":"regulation of TGF-beta 2 activation","type":"exact"},{"name":"regulation of TGFB2 activation","type":"exact"},{"name":"regulation of TGFbeta 2 activation","type":"exact"}],"termid":"GO:1901395"}


id: MONDO:0100402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly del(13q14-q21). (A cytogenetic abnormality that refers to deletion of chromosome bands 14-21 on the long arm of chromosome 13.)","definition_xrefs":["NCIT:C168770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, del(13q14-q21)","synonyms":[{"name":"AML, 13q14-q21 Deletion","type":"exact"},{"name":"AML, del(13)(q14-q21)","type":"exact"},{"name":"AML, del(13)(q14q21)","type":"exact"},{"name":"AML, del(13q)(13q14-21)","type":"exact"},{"name":"AML, del(13q14-q21)","type":"exact"}],"termid":"MONDO:0100402","xrefs":{"Monarch":{"xref_id":"0100402"}}}


id: GO:0050825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ice, water reduced to the solid state by cold temperature. It is a white or transparent colorless substance, crystalline, brittle, and viscoidal.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ice binding","synonyms":[{"name":"ice crystal binding","type":"exact"},{"name":"ice nucleation inhibitor activity","type":"related"}],"termid":"GO:0050825"}


id: GO:1904082
data:
  {"annotated_genes":["SJAG_03970","SJAG_04714","SJAG_04717"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88775],"is_not":false,"summary":null,"term":"GO:1904082"},{"annotations":[88433],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[95871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"}]},"cv_name":"biological_process","definition":"The process in which pyrimidine is transported across a membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transport","termid":"GO:0015855"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound transmembrane transport","termid":"GO:0072531"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"pyrimidine nucleobase transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1904082","terms_by_termid":{"GO:0098721":null,"GO:1904082":null,"GO:1905530":null}}


id: MONDO:0021251
data:
  {"annotated_genes":["SJAG_01419","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87613,85398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the endometrium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"},{"relation_name":"is_a","term_name":"tumor of uterus","termid":"MONDO:0021353"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02748":null},"genotype_count":0,"is_obsolete":false,"name":"endometrium neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:123844007","MESH:D016889","ICD9:239.5","NCIT:C3012","UMLS:C0014170","MEDGEN:8619"],"synonyms":[{"name":"endometrial neoplasm","type":"exact"},{"name":"endometrial tumor","type":"exact"},{"name":"endometrial tumour","type":"exact"},{"name":"endometrium neoplasm (disease)","type":"exact"},{"name":"endometrium tumor","type":"exact"},{"name":"endometrium tumour","type":"exact"},{"name":"neoplasm of endometrium","type":"exact"},{"name":"neoplasm of the endometrium","type":"exact"},{"name":"tumor of endometrium","type":"exact"},{"name":"tumor of the endometrium","type":"exact"},{"name":"tumour of endometrium","type":"exact"},{"name":"tumour of the endometrium","type":"exact"}],"termid":"MONDO:0021251","terms_by_termid":{"MONDO:0011962":null},"xrefs":{"Monarch":{"xref_id":"0021251"}}}


id: GO:0030761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,3',4',5,7,8-hexahydroxyflavone + S-adenosyl-L-methionine(1+) = 3,3',4',5,7-pentahydroxy-8-methoxyflavone + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.88","RHEA:16593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"8-hydroxyquercitin 8-O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04398","MetaCyc:2.1.1.88-RXN"],"synonyms":[{"name":"8-hydroxyquercetin 8-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:3,3',4',5,7,8-hexahydroxyflavone 8-O-methyltransferase activity","type":"related"},{"name":"flavonol 8-O-methyltransferase activity","type":"related"},{"name":"flavonol 8-methyltransferase activity","type":"related"}],"termid":"GO:0030761"}


id: GO:0045870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retroviral genome replication.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of viral genome replication","termid":"GO:0045070"},{"relation_name":"is_a","term_name":"regulation of single stranded viral RNA replication via double stranded DNA intermediate","termid":"GO:0045091"},{"relation_name":"is_a","term_name":"positive regulation of RNA biosynthetic process","termid":"GO:1902680"},{"relation_name":"positively_regulates","term_name":"single stranded viral RNA replication via double stranded DNA intermediate","termid":"GO:0039692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of single stranded viral RNA replication via double stranded DNA intermediate","synonyms":[{"name":"activation of retroviral genome replication","type":"narrow"},{"name":"positive regulation of retroviral genome replication","type":"exact"},{"name":"stimulation of retroviral genome replication","type":"narrow"},{"name":"up regulation of retroviral genome replication","type":"exact"},{"name":"up-regulation of retroviral genome replication","type":"exact"},{"name":"upregulation of retroviral genome replication","type":"exact"}],"termid":"GO:0045870"}


id: PBO:0090019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C Elc1","termid":"PBO:0090019"}


id: PATO:0001013
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001013 absolute intensity value (obsolete PATO:0001013)","termid":"PATO:0001013"}


id: PBO:0040551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4","termid":"PBO:0040551"}


id: PBO:0018215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid uptake transporter","termid":"PBO:0018215"}


id: MONDO:0015010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atypical glycine encephalopathy is a rare form of glycine encephalopathy (GE) presenting disease onset or clinical manifestations that differ from neonatal or infantile GE.","definition_xrefs":["Orphanet:289863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine encephalopathy","termid":"MONDO:0011612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"atypical glycine encephalopathy","secondary_identifiers":["icd11.foundation:51420481","UMLS:C4310943","GARD:17334","OMIM:617301","MEDGEN:934910"],"synonyms":[{"name":"GLYCINE encephalopathy with normal serum GLYCINE","type":"related"},{"name":"Glycine encephalopathy with normal serum Glycine","type":"related"},{"name":"atypical NKA","type":"exact"},{"name":"atypical non-ketotic hyperglycinemia","type":"exact"}],"termid":"MONDO:0015010","xrefs":{"Monarch":{"xref_id":"0015010"}}}


id: PBO:0040775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bestrophin 1","termid":"PBO:0040775"}


id: PATO:0001205
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having toothlike projections in the margin.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serrated","termid":"PATO:0001206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentated","synonyms":[{"name":"dentate","type":"exact"},{"name":"toothed","type":"exact"}],"termid":"PATO:0001205"}


id: PBO:0071376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30","termid":"PBO:0071376"}


id: MONDO:0100583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Jeune syndrome caused by biallelic loss-of-function variants in the GRK2 gene.","definition_xrefs":["PMID:33200460","PMID:38647386","PMID:38585547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Jeune syndrome - GRK2-related","synonyms":[{"name":"GRK2-related Jeune syndrome","type":"exact"},{"name":"asphyxiating thoracic dystrophy - GRK2-related","type":"exact"},{"name":"short rib polydactyly - GRK2 related","type":"exact"},{"name":"short rib thoracic dystrophy - GRK2 related","type":"exact"}],"termid":"MONDO:0100583","xrefs":{"Monarch":{"xref_id":"0100583"}}}


id: GO:0050119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosamine + H2O = D-glucosamine + acetate.","definition_xrefs":["EC:3.5.1.33","RHEA:20593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0019213","GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"N-acetylglucosamine deacetylase activity","secondary_identifiers":["KEGG_REACTION:R01200","MetaCyc:N-ACETYLGLUCOSAMINE-DEACETYLASE-RXN","Reactome:R-HSA-2022887"],"synonyms":[{"name":"N-acetyl-D-glucosamine amidohydrolase activity","type":"related"},{"name":"N-acetyl-D-glucosaminyl N-deacetylase activity","type":"related"},{"name":"acetylaminodeoxyglucose acetylhydrolase activity","type":"related"}],"termid":"GO:0050119"}


id: GO:0018414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of nickel into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"nickel incorporation into metallo-sulfur cluster","synonyms":[{"name":"nickel incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018414"}


id: PBO:0001548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom70 (predicted)","termid":"PBO:0001548"}


id: PBO:0057765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2054","termid":"PBO:0057765"}


id: FYPO:0006931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to butylated hydroxytoluene (dibutylhydroxytoluene; BHT). Cells stop growing (and may die) at a concentration of butylated hydroxytoluene that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to butylated hydroxytoluene","synonyms":[{"name":"hypersensitive to butylated hydroxytoluene","type":"exact"},{"name":"sensitive to 2,6-di-tert-butyl-4-methylphenol","type":"exact"},{"name":"sensitive to BHT","type":"exact"},{"name":"sensitive to butylated hydroxytoluene during mitotic cell cycle","type":"related"},{"name":"sensitive to butylated hydroxytoluene during vegetative growth","type":"exact"},{"name":"sensitive to dibutylhydroxytoluene","type":"exact"}],"termid":"FYPO:0006931"}


id: MONDO:0008582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypodontia-nail dysplasia syndrome is a form of ectodermal dysplasia.","definition_xrefs":["Orphanet:2228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tooth and nail syndrome","secondary_identifiers":["MESH:C536736","MEDGEN:140809","OMIM:189500","GARD:5587","SCTID:400036004","DOID:6678","NCIT:C40553","NORD:1777","UMLS:C0406735"],"synonyms":[{"name":"HND","type":"exact"},{"name":"TNS","type":"related"},{"name":"WITKOP syndrome","type":"related"},{"name":"Witkop syndrome","type":"exact"},{"name":"Witkop's syndrome","type":"exact"},{"name":"dysplasia of nails with hypodontia","type":"related"},{"name":"ectodermal dysplasia 3, Tooth/nail type","type":"related"},{"name":"ectodermal dysplasia 3, Witkop type","type":"related"},{"name":"hypodontia - dysplasia of nails","type":"related"},{"name":"hypodontia and nail dysplasia","type":"exact"},{"name":"hypodontia with nail dysplasia","type":"exact"},{"name":"hypodontia-dysplasia of nails syndrome","type":"related"},{"name":"hypodontia-nail dysgenesis syndrome","type":"exact"},{"name":"hypodontia-nail dysplasia","type":"exact"},{"name":"hypoplastic enamel-onycholysis-hypohidrosis syndrome","type":"exact"},{"name":"nail dysplasia with hypodontia","type":"related"},{"name":"tooth and nail syndrome","type":"exact"},{"name":"tooth-and-nail syndrome","type":"related"}],"termid":"MONDO:0008582","xrefs":{"Monarch":{"xref_id":"0008582"}}}


id: MONDO:0012763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing child absence epilepsy or idiopathic generalized epilepsy, in which the cause of the disease is a mutation in the CACNA1H gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, childhood absence, susceptibility to, 6","secondary_identifiers":["OMIM:611942","UMLS:C2749872","MEDGEN:440896"],"synonyms":[{"name":"CACNA1H childhood absence epilepsy","type":"related"},{"name":"ECA6","type":"exact"},{"name":"childhood absence epilepsy caused by mutation in CACNA1H","type":"related"},{"name":"epilepsy, childhood absence, susceptibility to, 6","type":"exact"},{"name":"epilepsy, childhood absence, susceptibility to, type 6","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 6","type":"related"},{"name":"susceptibility to childhood absence epilepsy 6","type":"exact"}],"termid":"MONDO:0012763","xrefs":{"Monarch":{"xref_id":"0012763"}}}


id: GO:0004363
data:
  {"annotated_genes":["SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70814],"is_not":false,"summary":null,"term":"GO:0004363"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gamma-glutamyl-L-cysteine + ATP + glycine = ADP + glutathione + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.2.3","RHEA:13557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"},{"relation_name":"is_a","term_name":"non-ribosomal peptide synthetase activity","termid":"GO:1904091"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"glutathione synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-174394","MetaCyc:GLUTATHIONE-SYN-RXN","Reactome:R-HSA-5602901","KEGG_REACTION:R00497"],"synonyms":[{"name":"GSH synthetase activity","type":"related"},{"name":"gamma-L-glutamyl-L-cysteine:glycine ligase (ADP-forming)","type":"related"},{"name":"glutathione synthetase activity","type":"related"}],"termid":"GO:0004363","terms_by_termid":{"GO:0004363":null}}


id: MONDO:0001467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete specific bursitis often of occupational origin (obsolete MONDO:0001467)","secondary_identifiers":["SCTID:42812006","DOID:12223","ICD9:727.2"],"synonyms":[{"name":"specific bursitides often of occupational origin","type":"exact"}],"termid":"MONDO:0001467","xrefs":{"Monarch":{"xref_id":"0001467"}}}


id: GO:0098679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of carbohydrate catabloism.","definition_xrefs":["PMID:16408318"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of carbohydrate catabolic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:0098679)","synonyms":[{"name":"regulation of carbohydrate catabolism by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0098679"}


id: PBO:0005720
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal cell cancer","termid":"PBO:0005720"}


id: PBO:0088441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate beta-glucosyltransferase Alg5","termid":"PBO:0088441"}


id: PBO:0004864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylanthranilate transferase Trp4 (predicted)","termid":"PBO:0004864"}


id: GO:0090228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of red or far-red light signaling pathway","termid":"GO:0090227"},{"relation_name":"positively_regulates","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of red or far-red light signaling pathway","synonyms":[{"name":"positive regulation of phytochrome signaling pathway","type":"exact"},{"name":"positive regulation of red or far-red light signalling pathway","type":"exact"}],"termid":"GO:0090228"}


id: FYPO:0007891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a smaller portion of the mating-type region than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased spatial extent of heterochromatin assembly","termid":"FYPO:0005849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased spatial extent of mating-type region heterochromatin assembly","termid":"FYPO:0007891"}


id: GO:0044428
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear part (obsolete GO:0044428)","synonyms":[{"name":"nuclear subcomponent","type":"exact"},{"name":"nucleus component","type":"exact"}],"termid":"GO:0044428"}


id: GO:0045434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the receptiveness of a female to male advances subsequent to mating.","definition_xrefs":["GOC:bf","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of female receptivity","termid":"GO:0007621"},{"relation_name":"is_a","term_name":"regulation of female receptivity, post-mating","termid":"GO:0046008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of female receptivity, post-mating","synonyms":[{"name":"down regulation of female receptivity, post-mating","type":"exact"},{"name":"down-regulation of female receptivity, post-mating","type":"exact"},{"name":"downregulation of female receptivity, post-mating","type":"exact"},{"name":"inhibition of female receptivity, post-mating","type":"narrow"}],"termid":"GO:0045434"}


id: PBO:0042118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 190","termid":"PBO:0042118"}


id: PBO:0031342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_hydroxyurea","termid":"PBO:0031342"}


id: FYPO:0002082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein ubiquitination during vegetative growth","termid":"FYPO:0000905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased protein ubiquitination during vegetative growth","synonyms":[{"name":"increased protein ubiquitination during mitotic cell cycle","type":"related"},{"name":"increased protein ubiquitinylation during vegetative growth","type":"exact"},{"name":"increased protein ubiquitylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002082"}


id: PBO:0079945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USO1 vesicle transport factor","termid":"PBO:0079945"}


id: MONDO:0018956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic bronchiectasis (IB) is a progressive lung disease characterized by chronic dilation of the bronchi and destruction of the bronchial walls in the absence of any underlying cause (such as post infectious disease, aspiration, immunodeficiency, congenital abnormalities and ciliary anomalies).","definition_xrefs":["Orphanet:60033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchiectasis","termid":"MONDO:0004822"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic bronchiectasis","secondary_identifiers":["GARD:16664","UMLS:C0339985","SCTID:233629001","MEDGEN:573462"],"termid":"MONDO:0018956","xrefs":{"Monarch":{"xref_id":"0018956"}}}


id: GO:0086049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the AV node cardiac muscle cell membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"part_of","term_name":"AV node cell action potential","termid":"GO:0086016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane repolarization during AV node cell action potential","synonyms":[{"name":"membrane repolarization involved in regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"membrane repolarization involved in regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086049"}


id: PBO:0065405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 6 pseudogene 1","termid":"PBO:0065405"}


id: PBO:0030112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-excess_nuclear_envelope_present","termid":"PBO:0030112"}


id: FYPO:0004536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to mitotic cell cycle spindle assembly checkpoint signaling is abnormal (does not occur, or occurs abnormally). Abnormal arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal response to mitotic cell cycle checkpoint signaling","termid":"FYPO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000298","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal response to mitotic cell cycle spindle assembly checkpoint signaling","synonyms":[{"name":"abnormal mitotic cell cycle spindle assembly checkpoint arrest","type":"related"},{"name":"abnormal occurrence of mitotic cell cycle arrest resulting from spindle assembly checkpoint activation","type":"related"},{"name":"abnormal occurrence of mitotic cell cycle arrest resulting from spindle assembly defective checkpoint activation","type":"related"},{"name":"abnormal response to mitotic spindle assembly checkpoint signaling","type":"exact"}],"termid":"FYPO:0004536"}


id: PR:Q9UTR6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- och1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTR6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"initiation-specific alpha-1,6-mannosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.05c","synonyms":[{"name":"Spom972h-och1","type":"exact"}],"termid":"PR:Q9UTR6"}


id: GO:0050772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of axonogenesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"},{"relation_name":"is_a","term_name":"regulation of axonogenesis","termid":"GO:0050770"},{"relation_name":"positively_regulates","term_name":"axonogenesis","termid":"GO:0007409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axonogenesis","secondary_identifiers":["Reactome:R-HSA-209563"],"synonyms":[{"name":"activation of axonogenesis","type":"narrow"},{"name":"stimulation of axonogenesis","type":"narrow"},{"name":"up regulation of axonogenesis","type":"exact"},{"name":"up-regulation of axonogenesis","type":"exact"},{"name":"upregulation of axonogenesis","type":"exact"}],"termid":"GO:0050772"}


id: MONDO:0003192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the rete ovarii which is located in the ovarian hilus. It includes adenoma, cystadenoma, cystadenofibroma, and adenocarcinoma.","definition_xrefs":["NCIT:C40016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rete ovarii neoplasm","secondary_identifiers":["DOID:4895","UMLS:C1514909","MEDGEN:271118"],"synonyms":[{"name":"neoplasm of rete ovarii","type":"exact"},{"name":"rete ovarii neoplasm (disease)","type":"exact"},{"name":"rete ovarii tumor","type":"exact"},{"name":"rete ovarii tumour","type":"exact"},{"name":"tumor of rete ovarii","type":"exact"},{"name":"tumour of rete ovarii","type":"exact"}],"termid":"MONDO:0003192","xrefs":{"Monarch":{"xref_id":"0003192"}}}


id: GO:0160160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nicotine catabolic process.","definition_xrefs":["PMID:15838033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"positively_regulates","term_name":"nicotine catabolic process","termid":"GO:0019608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nicotine catabolic process","termid":"GO:0160160"}


id: FYPO:0002876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a lower extent than normal. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"},{"relation_name":"is_a","term_name":"decreased gene expression","termid":"FYPO:0006549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000294","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription","synonyms":[{"name":"reduced transcription","type":"exact"}],"termid":"FYPO:0002876"}


id: PBO:0066147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 3","termid":"PBO:0066147"}


id: PR:O94561
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bcp1 gene.","definition_xrefs":["UniProtKB:O94561","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin C1773.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.02c","synonyms":[{"name":"Spom972h-bcp1","type":"exact"},{"name":"nTPx (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nuclear thiol peroxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"thioredoxin reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94561"}


id: GO:0120286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of tryptophan.","definition_xrefs":["PMID:31498992","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid sensor activity","termid":"GO:0140785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140299","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"tryptophan sensor activity","synonyms":[{"name":"tryptophan sensing activity","type":"exact"}],"termid":"GO:0120286"}


id: PATO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A diameter that is along the anterior-posterior axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diameter","termid":"PATO:0001334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior-posterior diameter","termid":"PATO:0002041"}


id: PBO:0084820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; YBR230W-A has a paralog, COQ8, that arose from the whole genome duplication","termid":"PBO:0084820"}


id: PBO:0052575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KMT5A pseudogene 3","termid":"PBO:0052575"}


id: PBO:0053424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 366","termid":"PBO:0053424"}


id: PBO:0040615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 antagonist/killer 1","termid":"PBO:0040615"}


id: MONDO:0014092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in a mutation of SLC1A1 on chromosome 9p24.2.","definition_xrefs":["DOID:0070093"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"schizophrenia","termid":"MONDO:0005090"},{"relation_name":"is_a","term_name":"schizophrenia, susceptibility to","termid":"MONDO:0100182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schizophrenia 18","secondary_identifiers":["UMLS:C3808913","MEDGEN:815243","OMIM:615232"],"synonyms":[{"name":"SCZD18","type":"exact"},{"name":"chromosome 7q36.3 Duplication syndrome, 362-Kb","type":"exact"},{"name":"schizoaffective disorder","type":"related"},{"name":"schizophrenia 18","type":"exact"},{"name":"schizophrenia 18 with or without an affective disorder","type":"related"},{"name":"schizophrenia susceptibility 18","type":"exact"},{"name":"schizophrenia type 18","type":"exact"}],"termid":"MONDO:0014092","xrefs":{"Monarch":{"xref_id":"0014092"}}}


id: FYPO:0007851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spindle assembly does not occur during the first meiotic nuclear division.","definition_xrefs":["PMID:34346498","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis I","termid":"FYPO:0007745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished spindle assembly during meiosis I","synonyms":[{"name":"abolished meiosis I spindle assembly","type":"exact"},{"name":"abolished spindle assembly during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007851"}


id: FYPO:0004757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the initiation of DNA-dependent DNA replication is abnormal. May result in re-replication of all or part of the genome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of DNA replication initiation","termid":"FYPO:0004756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal negative regulation of DNA replication initiation","synonyms":[{"name":"DNA re-replication","type":"related"},{"name":"DNA replication defects, endoreduplication","type":"related"},{"name":"DNA rereplication","type":"related"},{"name":"abnormal negative regulation of DNA-dependent DNA replication initiation","type":"exact"}],"termid":"FYPO:0004757"}


id: PBO:0048861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 6","termid":"PBO:0048861"}


id: MONDO:0008825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis multiplex congenita-whistling face syndrome is an extremely rare type of arthrogryposis multiplex congenita characterized by the combination of multiple joint contractures with movement limitation, microstomia with a whistling appearance of the mouth that may cause feeding, swallowing, and speech difficulties, a distinctive expressionless facies, severe developmental delay, central and autonomous nervous system dysfunction (excessive salivation, temperature instability, myoclonic epileptic fits, bradycardia), occasionally Pierre-Robin sequence, and lethality generally occurring during the first months of life. Arthrogryposis multiplex congenita-whistling face syndrome has been suggested to be a fetal akinesia deformation sequence.","definition_xrefs":["Orphanet:1150"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita-whistling face syndrome","secondary_identifiers":["MEDGEN:349231","MESH:C538401","SCTID:720514008","OMIM:208155","UMLS:C1859711","GARD:792"],"synonyms":[{"name":"ILLUM syndrome","type":"related"},{"name":"Illum syndrome","type":"exact"},{"name":"arthrogryposis multiplex congenita whistling face","type":"related"},{"name":"arthrogryposis, whistling face, and developintellectual disability","type":"related"},{"name":"arthrogryposis, whistling face, and developmental retardation","type":"related"},{"name":"lethal autosomal recessive arthrogryposis multiplex congenita with whistling face and calcifications of the nervous system","type":"related"}],"termid":"MONDO:0008825","xrefs":{"Monarch":{"xref_id":"0008825"}}}


id: PATO:0000181
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000181 piloerection (obsolete PATO:0000181)","termid":"PATO:0000181"}


id: PBO:0069614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 891, pseudogene","termid":"PBO:0069614"}


id: PBO:0051198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-16 (pseudogene)","termid":"PBO:0051198"}


id: PBO:0045866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1AKMT4-ECE2 readthrough","termid":"PBO:0045866"}


id: GO:0019428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of allantoin, (2,5-dioxo-4-imidazolidinyl)urea.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allantoin metabolic process","termid":"GO:0000255"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantoin biosynthetic process","secondary_identifiers":["MetaCyc:URSIN-PWY"],"synonyms":[{"name":"allantoin anabolism","type":"exact"},{"name":"allantoin biosynthesis","type":"exact"},{"name":"allantoin formation","type":"exact"},{"name":"allantoin synthesis","type":"exact"}],"termid":"GO:0019428"}


id: PBO:0072204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 3","termid":"PBO:0072204"}


id: PBO:0111851
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helix-hairpin-helix","termid":"PBO:0111851"}


id: PBO:0071960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A1","termid":"PBO:0071960"}


id: GO:0018897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the sulfur atom from dibenzothiophene, a substance composed of two benzene rings linked by one sulfide bond and one carbon-carbon bond.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibenzothiophene metabolic process","termid":"GO:0018895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"dibenzothiophene desulfurization","secondary_identifiers":["UM-BBD_pathwayID:dbt","MetaCyc:PWY-681"],"synonyms":[{"name":"dibenzothiophene desulphurization","type":"exact"}],"termid":"GO:0018897"}


id: PBO:0069921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1213, pseudogene","termid":"PBO:0069921"}


id: PBO:0055574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3010","termid":"PBO:0055574"}


id: GO:0019395
data:
  {"annotated_genes":["SJAG_00706"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"}]},"cv_name":"biological_process","definition":"The removal of one or more electrons from a fatty acid, with or without the concomitant removal of a proton or protons, by reaction with an electron-accepting substance, by addition of oxygen or by removal of hydrogen.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"lipid oxidation","termid":"GO:0034440"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"fatty acid oxidation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0019395","terms_by_termid":{"GO:0001561":null}}


id: MONDO:0005469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sudden fall of the blood pressure of at least 20/10 mm Hg when a person stands up.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotensive disorder","termid":"MONDO:0005468"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthostatic hypotension","secondary_identifiers":["EFO:0005252","ICD9:458.0","MEDGEN:43803","icd11.foundation:56009591","HP:0001278","SCTID:28651003","UMLS:C0020651"],"synonyms":[{"name":"orthostatic hypotension","type":"exact"},{"name":"orthostatic hypotension (disease)","type":"exact"}],"termid":"MONDO:0005469","xrefs":{"Monarch":{"xref_id":"0005469"}}}


id: GO:0010008
data:
  {"annotated_genes":["SJAG_01981","SJAG_04513","SJAG_04489","SJAG_02429","SJAG_04349","SJAG_04822","SJAG_03347","SJAG_04023","SJAG_03892","SJAG_02587","SJAG_02100","SJAG_04024","SJAG_00416","SJAG_04912","SJAG_00314","SJAG_01112","SJAG_04936","SJAG_01379","SJAG_00108","SJAG_01236","SJAG_03783","SJAG_07012","SJAG_00301","SJAG_03511","SJAG_01242","SJAG_00638","SJAG_00299","SJAG_03250","SJAG_00900","SJAG_05210","SJAG_05207"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60894,72939,78466,80606,99009,102283,102295],"is_not":false,"summary":null,"term":"GO:0010008"},{"annotations":[90916],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010009"},{"annotations":[96228,100033,80711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031901"},{"annotations":[72672,88461],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000813"},{"annotations":[71347,72531,78807],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000814"},{"annotations":[76100,71436,71116,76642,78066,70370],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000815"},{"annotations":[101396,97985,78805,76509,88462,92341,99832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031902"},{"annotations":[62542,60522,119748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032585"},{"annotations":[99189,75603],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an endosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00314":null,"SJAG_00416":null,"SJAG_00638":null,"SJAG_00900":null,"SJAG_01112":null,"SJAG_01236":null,"SJAG_01242":null,"SJAG_01379":null,"SJAG_01981":null,"SJAG_02100":null,"SJAG_02429":null,"SJAG_02587":null,"SJAG_03250":null,"SJAG_03347":null,"SJAG_03511":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04513":null,"SJAG_04822":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005768","GO:0005737"],"is_obsolete":false,"name":"endosome membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:32109380":null},"secondary_identifiers":["NIF_Subcellular:sao978443756"],"synonyms":[{"name":"endosomal membrane","type":"exact"}],"termid":"GO:0010008","terms_by_termid":{"GO:0000813":null,"GO:0000814":null,"GO:0000815":null,"GO:0010008":null,"GO:0010009":null,"GO:0031901":null,"GO:0031902":null,"GO:0032585":null,"GO:0034424":null}}


id: PBO:0053962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1270","termid":"PBO:0053962"}


id: GO:0043382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of memory T cell differentiation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"regulation of memory T cell differentiation","termid":"GO:0043380"},{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"memory T cell differentiation","termid":"GO:0043379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of memory T cell differentiation","synonyms":[{"name":"activation of memory T cell differentiation","type":"narrow"},{"name":"positive regulation of memory T cell development","type":"related"},{"name":"positive regulation of memory T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of memory T-cell differentiation","type":"exact"},{"name":"positive regulation of memory T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of memory T cell differentiation","type":"narrow"},{"name":"up regulation of memory T cell differentiation","type":"exact"},{"name":"up-regulation of memory T cell differentiation","type":"exact"},{"name":"upregulation of memory T cell differentiation","type":"exact"}],"termid":"GO:0043382"}


id: PBO:0044991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExH-box helicase 58","termid":"PBO:0044991"}


id: MONDO:0002904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A symptom of neurologic or psychiatric dysfunction in which the individual involuntarily and meaninglessly repeats a recently heard word, series of words, or a song.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"speech disorder","termid":"MONDO:0004730"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"echolalia","secondary_identifiers":["MESH:D004454","UMLS:C0013528","MEDGEN:8532","icd11.foundation:928818606","DOID:4188","HP:0010529"],"synonyms":[{"name":"echolalia","type":"exact"},{"name":"echolalia (disease)","type":"exact"}],"termid":"MONDO:0002904","xrefs":{"Monarch":{"xref_id":"0002904"}}}


id: PBO:0069395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 655, pseudogene","termid":"PBO:0069395"}


id: GO:1901703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein localization that is involved in auxin polar transport.","definition_xrefs":["PMID:23163883","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization involved in auxin polar transport","synonyms":[{"name":"establishment and maintenance of protein localization involved in auxin polar transport","type":"exact"},{"name":"protein localisation involved in auxin polar transport","type":"exact"}],"termid":"GO:1901703"}


id: PBO:0071133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 135","termid":"PBO:0071133"}


id: PBO:0052538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 11","termid":"PBO:0052538"}


id: PBO:0077751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of myb1 like 1 membrane trafficking protein","termid":"PBO:0077751"}


id: GO:2000793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cell proliferation that is involved in heart valve development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in heart valve development","synonyms":[{"name":"cell proliferation of cardiac valve development","type":"exact"},{"name":"cell proliferation of heart valve development","type":"exact"}],"termid":"GO:2000793"}


id: MONDO:0032760
data:
  {"annotated_genes":["SJAG_05282","SJAG_04613"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87493,87494],"is_not":false,"summary":null,"term":"MONDO:0032760"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04613":null,"SJAG_05282":null},"genotype_count":0,"is_obsolete":false,"name":"developmental delay with or without dysmorphic facies and autism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1679263","OMIM:618454","UMLS:C5193106"],"synonyms":[{"name":"DEDDFA","type":"related"},{"name":"DEVELOPMENTAL DELAY WITH OR WITHOUT DYSMORPHIC FACIES AND AUTISM","type":"related"}],"termid":"MONDO:0032760","terms_by_termid":{"MONDO:0032760":null},"xrefs":{"Monarch":{"xref_id":"0032760"}}}


id: PBO:0079070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 4-1","termid":"PBO:0079070"}


id: PBO:0027064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_localization_phenotype","termid":"PBO:0027064"}


id: PBO:0091395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K48-linkage specific deubiquitinase","termid":"PBO:0091395"}


id: PATO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000313 color saturation value (obsolete PATO:0000313)","termid":"PATO:0000313"}


id: GO:0017030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stabilization of the structure of beta-galactosidase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-galactosidase stabilization activity (obsolete GO:0017030)","synonyms":[{"name":"beta-galactosidase stabilization activity","type":"exact"}],"termid":"GO:0017030"}


id: MONDO:0023605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Laugier-Hunziker syndrome","secondary_identifiers":["ICD9:528.9","SCTID:238706002","MEDGEN:98027","UMLS:C0406425"],"synonyms":[{"name":"LHS","type":"related"},{"name":"Laugier and Hunziker pigmentation","type":"related"},{"name":"Laugier-Hunziker syndrome","type":"exact"}],"termid":"MONDO:0023605","xrefs":{"Monarch":{"xref_id":"0023605"}}}


id: MONDO:0010197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Freeman-Sheldon syndrome","termid":"MONDO:0008675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"whistling face syndrome, recessive form","secondary_identifiers":["MEDGEN:376364","OMIM:277720","DOID:0111606","GARD:10024","MESH:C536699","UMLS:C1848470"],"synonyms":[{"name":"whistling face syndrome, recessive form","type":"exact"}],"termid":"MONDO:0010197","xrefs":{"Monarch":{"xref_id":"0010197"}}}


id: MONDO:0003516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma","termid":"MONDO:0002601"},{"relation_name":"is_a","term_name":"adult germ cell tumor","termid":"MONDO:0044878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult teratoma","secondary_identifiers":["NCIT:C9013","UMLS:C1368898","DOID:5565","MEDGEN:277966"],"synonyms":[{"name":"adult teratoma","type":"exact"},{"name":"teratoma","type":"broad"},{"name":"teratoma of adults","type":"exact"}],"termid":"MONDO:0003516","xrefs":{"Monarch":{"xref_id":"0003516"}}}


id: PBO:0017845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cationic amino acid transmembrane transporter Cat1","termid":"PBO:0017845"}


id: PATO:0001474
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's axis being positioned forward.","definition_xrefs":["bdid:bdid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anteverted","termid":"PATO:0001474"}


id: PBO:0059770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 44","termid":"PBO:0059770"}


id: PBO:0047722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile X messenger ribonucleoprotein 1","termid":"PBO:0047722"}


id: GO:2000614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thyroid-stimulating hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"is_a","term_name":"regulation of thyroid-stimulating hormone secretion","termid":"GO:2000612"},{"relation_name":"positively_regulates","term_name":"thyroid-stimulating hormone secretion","termid":"GO:0070460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of thyroid-stimulating hormone secretion","synonyms":[{"name":"positive regulation of TSH secretion","type":"exact"},{"name":"positive regulation of thyroid stimulating hormone secretion","type":"exact"}],"termid":"GO:2000614"}


id: SO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region including the Transcription Start Site (TSS) of a gene and serving as a platform for Pre-Initiation Complex (PIC) assembly, enabling transcription of a gene under certain conditions.","direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic_promoter","synonyms":[{"name":"Eukaryotic promoter","type":"exact"}],"termid":"SO:0002221"}


id: GO:0097360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of chorionic trophoblast cells, resulting in the expansion of their population.","definition_xrefs":["GOC:BHF","PMID:15150278","CL:0011101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorionic trophoblast cell proliferation","termid":"GO:0097360"}


id: PBO:0075897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST7 overlapping transcript 3","termid":"PBO:0075897"}


id: PBO:0076343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 10","termid":"PBO:0076343"}


id: MONDO:0005842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process affecting the mucous membrane of the maxillary sinus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sinusitis","termid":"MONDO:0005961"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxillary sinusitis","secondary_identifiers":["DOID:2051","SCTID:88348008","NCIT:C34809","MEDGEN:44313","MESH:D015523","UMLS:C0024959","EFO:0007361"],"termid":"MONDO:0005842","xrefs":{"Monarch":{"xref_id":"0005842"}}}


id: GO:0019438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of aromatic compounds, any substance containing an aromatic carbon ring.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete aromatic compound biosynthetic process (obsolete GO:0019438)","termid":"GO:0019438"}


id: MOD:00298
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues, an L-glutamic acid residue, an L-histidine residue, an L-serine residue and a one-nickel three-iron three-sulfur three-oxygen cluster to tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide.","definition_xrefs":["PubMed:2550436","RESID:AA0293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"nickel containing modified residue","termid":"MOD:00741"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","synonyms":[{"name":"Ni-3Fe-2S-3O cluster","type":"exact"},{"name":"carbon monoxide dehydrogenase nickel-iron cofactor","type":"exact"},{"name":"hybrid nickel-triiron cluster","type":"exact"},{"name":"mu-1:2kappaO-oxido-mu-1:3kappaO-oxido-mu-2:4kappaO-oxido-mu-3:4kappaS-sulfido-mu3-2:3:4kappaS-sulfido-S-cysteinyl-N1'-histidino-O5-glutamato 1-iron-S5-cysteine persulfido-O3-serinyl 2-nickel-3,4-bis-(S-cysteinyl iron)","type":"exact"},{"name":"tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","type":"exact"}],"termid":"MOD:00298"}


id: PBO:0039365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion molecule with Ig like domain 1","termid":"PBO:0039365"}


id: MONDO:0012909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal defects, genital hypoplasia, and intellectual disability","secondary_identifiers":["OMIM:612447","MESH:C567306","UMLS:C2676231","MEDGEN:382795"],"synonyms":[{"name":"skeletal defects, genital hypoplasia, and intellectual disability","type":"exact"},{"name":"skeletal defects, genital hypoplasia, and mental retardation","type":"exact"}],"termid":"MONDO:0012909","xrefs":{"Monarch":{"xref_id":"0012909"}}}


id: GO:0015337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: Me2+(out) + H+(out) = Me2+(in) + H+(in). Me can be Mn2+ or Cu2+.","definition_xrefs":["TC:2.A.55.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete low affinity metal ion uptake transporter activity (obsolete GO:0015337)","synonyms":[{"name":"low affinity metal ion uptake transporter activity","type":"exact"}],"termid":"GO:0015337"}


id: GO:0050305
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id: GO:0050955
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a temperature stimulus, convert it to a molecular signal, and recognize and characterize the signal. Thermoception in larger animals is mainly done in the skin; mammals have at least two types of sensor, for detecting heat (temperatures above body temperature) and cold (temperatures below body temperature).","definition_xrefs":["GOC:ai","Wikipedia:Thermoception"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of temperature stimulus","termid":"GO:0050951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermoception","synonyms":[{"name":"thermoreception","type":"exact"}],"termid":"GO:0050955"}


id: PBO:0088013
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type II nitroreductase, using NADH as reductant; mutants are defective in fatty acid mediated repression of genes involved in fatty acid biosynthesis indicative of a role in lipid signaling; involved in the oxidative stress response; transcription induction by cadmium and selenite indicates a possible role in the metal stress response; expression induced in cells treated with the mycotoxin patulin","termid":"PBO:0088013"}


id: PBO:0089713
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination protein Dbl2","termid":"PBO:0089713"}


id: PBO:0086713
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutant has long chronological lifespan; has homology to Staphylococcus aureus nuclease; GFP-fusion protein localizes to mitochondria; is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086713"}


id: PBO:0077285
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 30A","termid":"PBO:0077285"}


id: PBO:0001590
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAlv9 family protein, involved in post Golgi transport (predicted)","termid":"PBO:0001590"}


id: GO:0015135
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id: PBO:0083694
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme that mediates the conjugation of Rub1p; a ubiquitin-like protein, to other proteins; related to E2 ubiquitin-conjugating enzymes","termid":"PBO:0083694"}


id: PBO:0031249
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_wall_organization_during_vegetative_growth","termid":"PBO:0031249"}


id: PR:Q9Y7V2
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC645.13 gene.","definition_xrefs":["UniProtKB:Q9Y7V2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor bye1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.13","synonyms":[{"name":"Spom972h-SPCC645.13","type":"exact"}],"termid":"PR:Q9Y7V2"}


id: PBO:0080286
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 49 pseudogene","termid":"PBO:0080286"}


id: PBO:0025434
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  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disorders","termid":"PBO:0025434"}


id: PBO:0027980
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id: GO:0070217
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id: PBO:0074230
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 46 member 3","termid":"PBO:0074230"}


id: MONDO:0007136
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anorectal malformation","termid":"MONDO:0019938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary anorectal anomalies","secondary_identifiers":["MESH:C567938","OMIM:107100","UMLS:C3495676","MEDGEN:501217"],"synonyms":[{"name":"anorectal anomalies","type":"related"},{"name":"genetic anorectal anomalies","type":"exact"}],"termid":"MONDO:0007136","xrefs":{"Monarch":{"xref_id":"0007136"}}}


id: MONDO:0005183
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign ovarian surface epithelial-stromal tumor characterized by the presence of cystic structures lined by serous epithelial cells, mucinous columnar epithelial cells, or endometrial-type well-differentiated cells.","definition_xrefs":["NCIT:C4060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystadenoma","termid":"MONDO:0002369"},{"relation_name":"is_a","term_name":"ovarian adenoma benign","termid":"MONDO:0005179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian cystadenoma","secondary_identifiers":["DOID:3269","ICD9:620.2","EFO:0002511","MEDGEN:138041","SCTID:198297004","UMLS:C0346169"],"synonyms":[{"name":"benign cystadenoma of ovary","type":"exact"},{"name":"benign cystadenoma of the ovary","type":"exact"},{"name":"benign ovarian cystadenoma","type":"exact"},{"name":"cystadenoma of ovary","type":"exact"},{"name":"cystadenoma of the ovary","type":"exact"},{"name":"cystoma serosum simplex","type":"exact"},{"name":"ovarian cystadenoma","type":"exact"},{"name":"ovary cystadenoma","type":"exact"},{"name":"simple cystoma of ovary","type":"exact"},{"name":"simple cystoma of the ovary","type":"exact"},{"name":"simple ovarian cystoma","type":"exact"}],"termid":"MONDO:0005183","xrefs":{"Monarch":{"xref_id":"0005183"}}}


id: PBO:0003390
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  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.21","termid":"PBO:0003390"}


id: PBO:0052422
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIRREL3 antisense RNA 1","termid":"PBO:0052422"}


id: GO:0018983
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id: MONDO:0002525
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id: GO:2000545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell chemotaxis to fibroblast growth factor.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell chemotaxis to fibroblast growth factor","termid":"GO:1904848"},{"relation_name":"is_a","term_name":"regulation of endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:2000544"},{"relation_name":"is_a","term_name":"negative regulation of endothelial cell chemotaxis","termid":"GO:2001027"},{"relation_name":"negatively_regulates","term_name":"endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:0035768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:2000545"}


id: GO:0060273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior in which an organism sheds tears, often accompanied by non-verbal vocalizations and in response to external or internal stimuli.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"crying behavior","termid":"GO:0060273"}


id: FYPO:0000447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which any process of protein complex assembly at the cellular level is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein-containing complex assembly","synonyms":[{"name":"abnormal protein complex assembly","type":"narrow"},{"name":"abnormal protein complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal protein complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0000447"}


id: GO:0001932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"regulation of phosphorylation","termid":"GO:0042325"},{"relation_name":"regulates","term_name":"protein phosphorylation","termid":"GO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein phosphorylation","synonyms":[{"name":"regulation of protein amino acid phosphorylation","type":"exact"}],"termid":"GO:0001932"}


id: MONDO:0100419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly KIT exon 8 mutation. (A molecular genetic abnormality indicating the presence of a mutation in exon 8 of the KIT gene located within 4q11-q12.)","definition_xrefs":["NCIT:C128660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, KIT exon 8 mutation","synonyms":[{"name":"AML, CD117 Exon 8 Mutation","type":"exact"},{"name":"AML, KIT Proto-Oncogene Tyrosine Protein Kinase Gene Exon 8 Mutation","type":"exact"},{"name":"AML, KIT exon 8 mutation","type":"exact"},{"name":"AML, c-KIT Exon 8 Mutation","type":"exact"},{"name":"AML, v-Kit Hardy-Zuckerman 4 Feline Sarcoma Viral Oncogene Homolog Gene Exon 8 Mutation","type":"exact"}],"termid":"MONDO:0100419","xrefs":{"Monarch":{"xref_id":"0100419"}}}


id: PBO:0072069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 7","termid":"PBO:0072069"}


id: PBO:0076918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFAP2E antisense RNA 1","termid":"PBO:0076918"}


id: MONDO:0005020
data:
  {"annotated_genes":["SJAG_03447","SJAG_02226","SJAG_02231","SJAG_02431","SJAG_03204","SJAG_02091","SJAG_00260","SJAG_03136","SJAG_03453","SJAG_03363","SJAG_03703","SJAG_01082","SJAG_01665","SJAG_02426","SJAG_04394","SJAG_04059","SJAG_03805","SJAG_03145","SJAG_00857","SJAG_04206","SJAG_04049","SJAG_01620","SJAG_02093","SJAG_03989","SJAG_03920","SJAG_03824","SJAG_00980","SJAG_04623","SJAG_01837","SJAG_02131","SJAG_04699","SJAG_02187","SJAG_04118","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85747,85746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014528"},{"annotations":[86836,86837,86834,86835,86833,86830,86832,87682,86831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[86788,86789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014375"},{"annotations":[87347,87346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009114"},{"annotations":[86469,86470,86468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018794"},{"annotations":[87158,87159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011719"},{"annotations":[85694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[87709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012610"},{"annotations":[87713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012831"},{"annotations":[85903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0006065"},{"annotations":[86722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[85545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[85994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[85996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[86896,86897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0025708"},{"annotations":[86900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030296"},{"annotations":[86691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030329"},{"annotations":[86006,86007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"},{"annotations":[87258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013452"},{"annotations":[86782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[86633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"},{"annotations":[87093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020754"},{"annotations":[86893,86892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859157"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the small or large intestine.","definition_xrefs":["NCIT:C26801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_00857":null,"SJAG_00980":null,"SJAG_01082":null,"SJAG_01620":null,"SJAG_01665":null,"SJAG_01837":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02131":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02426":null,"SJAG_02431":null,"SJAG_02748":null,"SJAG_03136":null,"SJAG_03145":null,"SJAG_03204":null,"SJAG_03363":null,"SJAG_03447":null,"SJAG_03453":null,"SJAG_03703":null,"SJAG_03805":null,"SJAG_03824":null,"SJAG_03920":null,"SJAG_03989":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04118":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04623":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:569.4","ICD9:569","DOID:5295","ICD9:570-579.99","ICD9:564.4","EFO:0009431","ICD9:520-579.99","ICD9:560-569.99","ICD9:569.89","ICD9:575","SCTID:85919009","UMLS:C0021831","ICD9:569.9","MESH:D007410","ICD9:564","ICD9:569.49","MEDGEN:7130"],"synonyms":[{"name":"disease of intestine","type":"exact"},{"name":"disease or disorder of intestine","type":"exact"},{"name":"disease, intestinal","type":"related"},{"name":"diseases, intestinal","type":"related"},{"name":"disorder of intestine","type":"exact"},{"name":"intestinal disease","type":"exact"},{"name":"intestinal disorder","type":"exact"},{"name":"intestine disease","type":"exact"},{"name":"intestine disease or disorder","type":"exact"}],"termid":"MONDO:0005020","terms_by_termid":{"MONDO:0005575":null,"MONDO:0006065":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0009114":null,"MONDO:0009238":null,"MONDO:0011719":null,"MONDO:0012249":null,"MONDO:0012610":null,"MONDO:0012831":null,"MONDO:0013452":null,"MONDO:0013699":null,"MONDO:0013710":null,"MONDO:0013818":null,"MONDO:0014375":null,"MONDO:0014528":null,"MONDO:0018794":null,"MONDO:0020754":null,"MONDO:0024541":null,"MONDO:0025708":null,"MONDO:0030296":null,"MONDO:0030329":null,"MONDO:0859157":null},"xrefs":{"Monarch":{"xref_id":"0005020"}}}


id: FYPO:0006081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is increased.","definition_xrefs":["PMID:20705466","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actin cortical patch","termid":"FYPO:0000742"},{"relation_name":"is_a","term_name":"increased protein localization to cell cortex during vegetative growth","termid":"FYPO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to actin cortical patch","synonyms":[{"name":"increased protein localisation to actin cortical patch during vegetative growth","type":"exact"},{"name":"increased protein localization to F-actin patch","type":"exact"},{"name":"increased protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"increased protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"increased protein localization to actin patch","type":"exact"}],"termid":"FYPO:0006081"}


id: GO:0048806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the genitalia over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"},{"relation_name":"part_of","term_name":"sex differentiation","termid":"GO:0007548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genitalia development","synonyms":[{"name":"genital development","type":"exact"}],"termid":"GO:0048806"}


id: GO:0110123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myotube cell migration.","definition_xrefs":["GOC:ha","PMID:29122742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"myotube cell migration","termid":"GO:0110122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myotube cell migration","termid":"GO:0110123"}


id: GO:0052341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of pectin in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of cell wall pectin in other organism involved in symbiotic interaction (obsolete GO:0052341)","synonyms":[{"name":"catabolism by organism of cell wall pectin in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052341"}


id: MONDO:0044983
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"A benign mesenchymal neoplasm composed of adipose (fatty) tissue. The most common representative of this category is the lipoma.","definition_xrefs":["NCIT:C4502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign connective and soft tissue neoplasm","termid":"MONDO:0000654"},{"relation_name":"is_a","term_name":"tumor of adipose tissue","termid":"MONDO:0021354"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"is_obsolete":false,"name":"benign lipomatous neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:91084","UMLS:C0346118","icd11.foundation:226447034"],"synonyms":[{"name":"adipose tissue benign connective and soft tissue neoplasm","type":"exact"},{"name":"benign adipose tissue neoplasm","type":"exact"},{"name":"benign adipose tissue tumor","type":"exact"},{"name":"benign adipose tissue tumour","type":"exact"},{"name":"benign connective and soft tissue neoplasm of adipose tissue","type":"exact"},{"name":"benign lipomatous neoplasm","type":"exact"},{"name":"benign lipomatous tumor","type":"exact"},{"name":"benign lipomatous tumour","type":"exact"},{"name":"benign neoplasm of adipose tissue","type":"exact"},{"name":"benign neoplasm of the adipose tissue","type":"exact"},{"name":"benign tumor of adipose tissue","type":"related"},{"name":"benign tumor of the adipose tissue","type":"exact"},{"name":"benign tumour of adipose tissue","type":"related"},{"name":"benign tumour of the adipose tissue","type":"exact"}],"termid":"MONDO:0044983","terms_by_termid":{"MONDO:0007908":null},"xrefs":{"Monarch":{"xref_id":"0044983"}}}


id: PBO:0054999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2414","termid":"PBO:0054999"}


id: PBO:0079226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 4","termid":"PBO:0079226"}


id: GO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a MAP kinase to the nucleus that occurs in the context of cell wall organization or biogenesis.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK import into nucleus involved in cell wall organization or biogenesis (obsolete GO:0000201)","synonyms":[{"name":"MAPK import into nucleus involved in cell wall biogenesis","type":"narrow"},{"name":"MAPK import into nucleus involved in cell wall integrity","type":"exact"},{"name":"cell wall biogenesis, MAPK import into nucleus","type":"exact"},{"name":"cell wall biogenesis, nuclear translocation of MAPK","type":"narrow"},{"name":"nuclear translocation of MAPK involved in cell wall biogenesis","type":"narrow"},{"name":"nuclear translocation of MAPK involved in cell wall integrity","type":"narrow"}],"termid":"GO:0000201"}


id: GO:0033908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-L-rhamnose residues in beta-L-rhamnosides.","definition_xrefs":["EC:3.2.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"beta-L-rhamnosidase activity","secondary_identifiers":["MetaCyc:3.2.1.43-RXN"],"synonyms":[{"name":"beta-L-rhamnoside rhamnohydrolase activity","type":"related"}],"termid":"GO:0033908"}


id: PBO:0060368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocardin-induced smooth muscle lncRNA, inducer of differentiation","termid":"PBO:0060368"}


id: PR:O13746
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC16E8.18 gene.","definition_xrefs":["UniProtKB:O13746","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E8.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.18","synonyms":[{"name":"Spom972h-SPAC16E8.18","type":"exact"}],"termid":"PR:O13746"}


id: GO:0022412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring at the cellular level, that is involved in the reproductive function of a multicellular organism.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular process involved in reproduction in multicellular organism","synonyms":[{"name":"reproductive cellular process in multicellular organism","type":"exact"}],"termid":"GO:0022412"}


id: PR:Q9UTN0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTN0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C139.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.03","synonyms":[{"name":"Spom972h-toe2","type":"exact"}],"termid":"PR:Q9UTN0"}


id: MONDO:0020724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cerebral cavernous malformation","termid":"MONDO:0000820"},{"relation_name":"is_a","term_name":"famililal cerebral cavernous malformations","termid":"MONDO:0031037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cerebral cavernous malformation 1","secondary_identifiers":["OMIM:116860","UMLS:C1366911","MEDGEN:237128","DOID:0080491"],"synonyms":[{"name":"CCM","type":"related"},{"name":"cavernous angioma, familial","type":"related"},{"name":"cavernous angiomatous malformations","type":"related"},{"name":"cavernous malformations of CNS and retina","type":"related"},{"name":"cerebral capillary malformations","type":"related"},{"name":"cerebral cavernous malformation 1","type":"exact"},{"name":"cerebral cavernous malformations","type":"related"},{"name":"cerebral cavernous malformations 1","type":"related"},{"name":"cerebral cavernous malformations-1","type":"exact"},{"name":"familial cerebral cavernous malformation 1","type":"exact"},{"name":"hyperkeratotic cutaneous capillary-Venous malformations associated with cerebral capillary malformations","type":"related"}],"termid":"MONDO:0020724","xrefs":{"Monarch":{"xref_id":"0020724"}}}


id: PBO:0003648
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.9","termid":"PBO:0003648"}


id: PBO:0004637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein folding protein (predicted)","termid":"PBO:0004637"}


id: GO:0051913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chemical substance modulates synaptic plasticity, the ability of synapses to change as circumstances require.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic plasticity by chemical substance","synonyms":[{"name":"regulation of synaptic plasticity by drug","type":"narrow"}],"termid":"GO:0051913"}


id: PBO:0077512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 230","termid":"PBO:0077512"}


id: GO:0032775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to N-6 of adenine in a DNA molecule.","definition_xrefs":["GOC:pf"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation on adenine (obsolete GO:0032775)","synonyms":[{"name":"adenine methylation","type":"related"}],"termid":"GO:0032775"}


id: RO:0003309
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a chemical, environmental exposure, or some form of genetic variation) and a condition (a phenotype or disease), where the presence of the entity worsens some or all aspects of the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"contributes_to_severity_of_condition","termid":"RO:0003305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exacerbates_condition","termid":"RO:0003309"}


id: GO:0000110
data:
  {"annotated_genes":["SJAG_02334","SJAG_02828","SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70436,75312,76007],"is_not":false,"summary":null,"term":"GO:0000110"}]},"cv_name":"cellular_component","definition":"One of several protein complexes involved in nucleotide-excision repair; possesses DNA damage recognition and endodeoxynuclease activities. In S. cerevisiae, it is composed of Rad1p, Rad10p, and Rad14p; in human the subunits are ERCC4/XPF, ERCC1 and XPA, respectively.","definition_xrefs":["PMID:10915862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02334":null,"SJAG_02556":null,"SJAG_02828":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nucleotide-excision repair factor 1 complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"NEF1 complex","type":"exact"},{"name":"XPA-ERCC1-ERCC4 complex","type":"exact"}],"termid":"GO:0000110","terms_by_termid":{"GO:0000110":null}}


id: GO:0033777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + lithocholate + NADPH + O2 = 6-beta-hydroxylithocholate + H2O + NADP+.","definition_xrefs":["RHEA:18857","EC:1.14.14.138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"lithocholate 6beta-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R07203","MetaCyc:1.14.13.94-RXN"],"synonyms":[{"name":"6beta-hydroxylase activity","type":"broad"},{"name":"CYP3A10","type":"related"},{"name":"cytochrome P450 3A10/lithocholic acid 6beta-hydroxylase activity","type":"related"},{"name":"lithocholate 6beta-monooxygenase activity","type":"related"},{"name":"lithocholate,NADPH:oxygen oxidoreductase (6beta-hydroxylating) activity","type":"related"}],"termid":"GO:0033777"}


id: PBO:0041263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q binding protein","termid":"PBO:0041263"}


id: FYPO:0000454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which a microcolony forms, all cells in the population are inviable, and some cells are longer and other cells smaller than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including long and short cells (obsolete FYPO:0000454)","synonyms":[{"name":"inviable mixed population including long and short vegetative cells","type":"exact"}],"termid":"FYPO:0000454"}


id: GO:0003050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by the signaling molecule atrial natriuretic peptide.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by atrial natriuretic peptide","synonyms":[{"name":"blood pressure regulation by ANP","type":"related"},{"name":"blood pressure regulation by atrial natriuretic peptide","type":"exact"}],"termid":"GO:0003050"}


id: GO:0006328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete AT binding (obsolete GO:0006328)","synonyms":[{"name":"AT binding","type":"exact"}],"termid":"GO:0006328"}


id: GO:0072688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a SHREC complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"SHREC complex localization","synonyms":[{"name":"SHREC complex localisation","type":"exact"},{"name":"establishment and maintenance of SHREC complex localization","type":"exact"}],"termid":"GO:0072688"}


id: MONDO:0004480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic invasive intraductal papillary-mucinous carcinoma (obsolete MONDO:0004480)","termid":"MONDO:0004480","xrefs":{"Monarch":{"xref_id":"0004480"}}}


id: GO:0102040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: fumarate + a menaquinol = succinate + a menaquinone.","definition_xrefs":["GOC:pz","PMID:11850430"],"gene_count":0,"genotype_count":0,"name":"obsolete fumarate reductase (menaquinone) (obsolete GO:0102040)","termid":"GO:0102040"}


id: GO:0031280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of a cyclase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclase activity (obsolete GO:0031280)","synonyms":[{"name":"down regulation of cyclase activity","type":"exact"},{"name":"down-regulation of cyclase activity","type":"exact"},{"name":"downregulation of cyclase activity","type":"exact"},{"name":"inhibition of cyclase activity","type":"narrow"}],"termid":"GO:0031280"}


id: FYPO:0005719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromosome recapture does not occur during metaphase of mitosis. Chromosome recapture is the reattachment of chromosomes which have become detached from the spindle.","definition_xrefs":["GO:1990942","PMID:17881496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000641","FYPO:0000337","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abolished mitotic metaphase chromosome recapture","synonyms":[{"name":"abolished chromosome recapture during mitotic metaphase","type":"exact"},{"name":"abolished kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"abolished mitotic kinetochore retrieval","type":"exact"},{"name":"abolished mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"abolished mitotic metaphase chromosome retrieval to SPB","type":"exact"},{"name":"abolished mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"abolished mitotic sister kinetochore recapture","type":"exact"},{"name":"mitotic metaphase chromosome recapture abolished","type":"exact"}],"termid":"FYPO:0005719"}


id: FYPO:0003695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer free small ribosomal subunits in the cytosol than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cytosolic small ribosomal subunit level","synonyms":[{"name":"cytosolic small ribosomal subunit present at decreased level","type":"exact"},{"name":"decreased 40S ribosomal subunit level","type":"exact"},{"name":"decreased cytosolic small ribosomal subunit level during mitotic cell cycle","type":"related"},{"name":"decreased cytosolic small ribosomal subunit level during vegetative growth","type":"exact"},{"name":"decreased level of cytosolic small ribosomal subunits","type":"related"},{"name":"decreased small ribosomal subunit level","type":"broad"},{"name":"reduced cytosolic small ribosomal subunit level","type":"exact"}],"termid":"FYPO:0003695"}


id: MONDO:0018240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPV4-related bone disorder","secondary_identifiers":["GARD:21577","UMLS:C5680977","NANDO:2201021","MEDGEN:1842686","Orphanet:364820"],"synonyms":[{"name":"TRPV4-related skeletal dysplasia","type":"exact"}],"termid":"MONDO:0018240","xrefs":{"Monarch":{"xref_id":"0018240"}}}


id: PR:P36616
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An SRSF protein kinase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase dsk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.14c","secondary_identifiers":["UniProtKB:P36616"],"synonyms":[{"name":"Spom972h-SRPK3","type":"exact"},{"name":"dis1-suppressing protein kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36616"}


id: PBO:0057122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR205 host gene","termid":"PBO:0057122"}


id: PBO:0067008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 15, pseudogene","termid":"PBO:0067008"}


id: MONDO:0011199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary sclerosing cholangitis","termid":"MONDO:0013433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"nephropathy, progressive tubulointerstitial, with cholestatic liver disease","secondary_identifiers":["OMIM:602114","MEDGEN:355562","MESH:C566573","GARD:15344","UMLS:C1865831"],"synonyms":[{"name":"nephropathy, progressive tubulointerstitial, with cholestatic liver disease","type":"exact"}],"termid":"MONDO:0011199","xrefs":{"Monarch":{"xref_id":"0011199"}}}


id: PBO:0058720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6848","termid":"PBO:0058720"}


id: MONDO:0012922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited hypertrophic pyloric stenosis","termid":"MONDO:0100239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pyloric stenosis, infantile hypertrophic, 5","secondary_identifiers":["MESH:C567283","UMLS:C2675862","MEDGEN:390899","OMIM:612525"],"synonyms":[{"name":"IHPS5","type":"exact"},{"name":"infantile hypertrophic pyloric stenosis type 5","type":"exact"},{"name":"pyloric stenosis, infantile hypertrophic, 5","type":"exact"}],"termid":"MONDO:0012922","xrefs":{"Monarch":{"xref_id":"0012922"}}}


id: PBO:0056896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor 1","termid":"PBO:0056896"}


id: PBO:0083158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the 5' end of ATP1","termid":"PBO:0083158"}


id: MONDO:0007028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tear of one or more of the tendons of the four rotator cuff muscles of the shoulder. A rotator cuff 'injury' can include any type of irritation or overuse of those muscles or tendons, and is among the most common conditions affecting the shoulder.","definition_xrefs":["EFO:1001250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rotator cuff syndrome","secondary_identifiers":["ICD9:726.10","ICD10CM:M75.1","Wikipedia:Rotator_cuff_tear","icd11.foundation:1471943310","MEDGEN:538186","UMLS:C0263912","SCTID:4106009","ICD10WHO:M75.1"],"synonyms":[{"name":"rotator cuff tear","type":"related"}],"termid":"MONDO:0007028","xrefs":{"Monarch":{"xref_id":"0007028"}}}


id: PBO:0052052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KANSL1L antisense RNA 1","termid":"PBO:0052052"}


id: FYPO:0002134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA is decreased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-RNA interaction","termid":"FYPO:0002132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0002131","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein-RNA interaction","synonyms":[{"name":"decreased RNA binding","type":"exact"},{"name":"decreased RNA-protein interaction","type":"exact"},{"name":"reduced RNA binding","type":"exact"}],"termid":"FYPO:0002134"}


id: PBO:0041655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 1","termid":"PBO:0041655"}


id: MONDO:0014005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glomerulonephritis characterized by mesangial proliferation, endocapillary proliferation, and glomerular capillary wall remodeling with immune complex deposits from classical complement pathway activation.","definition_xrefs":["NCIT:C123055"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"atypical hemolytic-uremic syndrome","termid":"MONDO:0016244"},{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"},{"relation_name":"is_a","term_name":"hereditary nephritis","termid":"MONDO:0005334"},{"relation_name":"is_a","term_name":"primary membranoproliferative glomerulonephritis","termid":"MONDO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"immunoglobulin-mediated membranoproliferative glomerulonephritis","secondary_identifiers":["MEDGEN:767244","DOID:0080388","Orphanet:329903","GARD:17506","UMLS:C3554330","NANDO:1200726","OMIM:615008"],"synonyms":[{"name":"Ig-mediated MPGN","type":"exact"},{"name":"Ig-mediated membranoproliferative glomerulonephritis","type":"exact"},{"name":"NPHS7","type":"exact"},{"name":"immune complex mediated membranoproliferative glomerulonephritis","type":"exact"},{"name":"immunoglobulin-mediated MPGN","type":"exact"},{"name":"immunoglobulin-mediated membranoproliferative glomerulonephritis","type":"exact"},{"name":"membranoproliferative glomerulonephritis type I","type":"exact"},{"name":"mesangiocapillary glomerulonephritis type 1","type":"exact"},{"name":"nephrotic syndrome, type 7","type":"exact"},{"name":"nephrotic syndrome, type 7, with membranoproliferative glomerulonephritis","type":"exact"}],"termid":"MONDO:0014005","xrefs":{"Monarch":{"xref_id":"0014005"}}}


id: GO:0031919
data:
  {"annotated_genes":["SJAG_03652","SJAG_02962","SJAG_03808","SJAG_02152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117771,90479,119050,90480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[90482,117772,90481,119051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[117773,90484,119052,90483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903092"}]},"cv_name":"biological_process","definition":"The directed movement of any of the vitamin B6 compounds -- pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate -- into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"vitamin B6 transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031919","terms_by_termid":{"GO:1903090":null,"GO:1903091":null,"GO:1903092":null}}


id: PBO:0071175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 16","termid":"PBO:0071175"}


id: PR:O60173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX31 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03199","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21H7.04","secondary_identifiers":["UniProtKB:O60173"],"synonyms":[{"name":"Spom972h-DDX31","type":"exact"}],"termid":"PR:O60173"}


id: PBO:0056138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper like transcription regulator 1","termid":"PBO:0056138"}


id: GO:1900227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of NLRP3 inflammasome complex assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of NLRP3 inflammasome complex assembly","termid":"GO:1900225"},{"relation_name":"part_of","term_name":"positive regulation of inflammasome-mediated signaling pathway","termid":"GO:0141087"},{"relation_name":"positively_regulates","term_name":"NLRP3 inflammasome complex assembly","termid":"GO:0044546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of NLRP3 inflammasome complex assembly","synonyms":[{"name":"activation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"activation of NLRP3 inflammasome activation","type":"related"},{"name":"activation of NLRP3 inflammasome complex assembly","type":"narrow"},{"name":"positive regulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"positive regulation of NLRP3 inflammasome activation","type":"related"},{"name":"up regulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"up regulation of NLRP3 inflammasome activation","type":"related"},{"name":"up regulation of NLRP3 inflammasome complex assembly","type":"exact"},{"name":"up-regulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"up-regulation of NLRP3 inflammasome activation","type":"related"},{"name":"up-regulation of NLRP3 inflammasome complex assembly","type":"exact"},{"name":"upregulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"upregulation of NLRP3 inflammasome activation","type":"related"},{"name":"upregulation of NLRP3 inflammasome complex assembly","type":"exact"}],"termid":"GO:1900227"}


id: GO:0015719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of allantoate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"allantoate transport","synonyms":[{"name":"allantoin/allantoate transport","type":"broad"}],"termid":"GO:0015719"}


id: PBO:0078123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 8-5 (pseudogene)","termid":"PBO:0078123"}


id: PBO:0079439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tu translation elongation factor, mitochondrial","termid":"PBO:0079439"}


id: MONDO:0006911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete placental site trophoblastic tumor (obsolete MONDO:0006911)","termid":"MONDO:0006911","xrefs":{"Monarch":{"xref_id":"0006911"}}}


id: PBO:0076279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex protein 2 like","termid":"PBO:0076279"}


id: PBO:0110068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol pyrophosphatase Siw14","termid":"PBO:0110068"}


id: PBO:0089536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASP family protein involved in Golgi vesicle transport Coy1","termid":"PBO:0089536"}


id: GO:0051354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxidoreductase activity","synonyms":[{"name":"down regulation of oxidoreductase activity","type":"exact"},{"name":"down-regulation of oxidoreductase activity","type":"exact"},{"name":"downregulation of oxidoreductase activity","type":"exact"},{"name":"inhibition of oxidoreductase activity","type":"narrow"},{"name":"oxidoreductase inhibitor","type":"exact"}],"termid":"GO:0051354"}


id: GO:1905721
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97302],"is_not":false,"summary":null,"term":"GO:1905721"}]},"cv_name":"cellular_component","definition":"Any microtubule end that is part of a mitotic spindle astral microtubule.","definition_xrefs":["GOC:TermGenie","GO_REF:0000064","PMID:11007487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule end","termid":"GO:1990752"},{"relation_name":"part_of","term_name":"mitotic spindle astral microtubule","termid":"GO:0061673"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0072686"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0072686","GO:0005737"],"is_obsolete":false,"name":"mitotic spindle astral microtubule end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic spindle astral microtubule tip","type":"exact"}],"termid":"GO:1905721","terms_by_termid":{"GO:1905721":null}}


id: PBO:0027523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytokinesis_checkpoint","termid":"PBO:0027523"}


id: GO:0031868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prostaglandin F2-alpha receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"prostaglandin F2-alpha receptor binding","synonyms":[{"name":"prostaglandin F2-alpha receptor ligand","type":"narrow"},{"name":"prostanoid FP receptor binding","type":"exact"}],"termid":"GO:0031868"}


id: PBO:0011985
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"although this is demonstrated to be DNA polymerase epsilon interactor and names Dpb3, it appears to be the ortholog of S. cerevisie BUR6 and human DRAP1 (supported by PSIblast/ Treefam). The real Dpb3 appears to be the newly identified SPCC16C4.22 see Treefam:TF103009","termid":"PBO:0011985"}


id: MONDO:0004956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the prostate gland and has spread to other anatomic sites.","definition_xrefs":["NCIT:C8946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate carcinoma","termid":"MONDO:0005159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metastatic prostate carcinoma","secondary_identifiers":["UMLS:C0936223","SCTID:314994000","EFO:0000196","MEDGEN:215232","ICD9:199.1"],"synonyms":[{"name":"metastatic prostate cancer","type":"exact"},{"name":"metastatic prostate carcinoma","type":"exact"},{"name":"prostate cancer metastatic","type":"exact"},{"name":"prostate carcinoma metastatic","type":"exact"}],"termid":"MONDO:0004956","xrefs":{"Monarch":{"xref_id":"0004956"}}}


id: GO:0018952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving parathion, a highly toxic organophosphate compound formerly used as a broad spectrum insecticide, acaricide, fumigant and nematocide. Degradation of parathion by sunlight or liver enzymes can result in the formation of the active compound paraoxon which interferes with the nervous system through cholinesterase inhibition.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"parathion metabolic process","synonyms":[{"name":"parathion metabolism","type":"exact"}],"termid":"GO:0018952"}


id: MONDO:0016850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atypical Norrie disease due to monosomy Xp11.3 is a rare chromosomal anomaly syndrome, resulting from the partial deletion of the short arm of chromosome X, principally characterized by classical Norrie disease (bilateral, severe retinal malformations and opacity of the lens leading to congenital blindness, on occasion associated with progressive sensorineural deafness and intellectual disability), microcephaly, hypotonia, psychomotor and growth delay, moderate to severe mental handicap and disruptive behavior. Clinical phenotype is highly variable and immunodeficiency, epilepsy and hypogonadism have also been reported.","definition_xrefs":["Orphanet:261501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the short arm of chromosome X","termid":"MONDO:0017004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical Norrie disease due to monosomy Xp11.3","secondary_identifiers":["MEDGEN:1377538","ICD10CM:H35.5","GARD:20782","SCTID:733626002","UMLS:C4518083"],"synonyms":[{"name":"atypical Norrie disease due to Xp11.3 microdeletion","type":"exact"},{"name":"atypical Norrie disease due to del(X)(p11.3)","type":"exact"}],"termid":"MONDO:0016850","xrefs":{"Monarch":{"xref_id":"0016850"}}}


id: GO:0019388
data:
  {"annotated_genes":["SJAG_02954","SJAG_02950","SJAG_03818","SJAG_02951"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114018,114025,114036,114024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033499"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactose, the aldohexose galacto-hexose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose metabolic process","termid":"GO:0006012"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"galactose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"galactose breakdown","type":"exact"},{"name":"galactose catabolism","type":"exact"},{"name":"galactose degradation","type":"exact"}],"termid":"GO:0019388","terms_by_termid":{"GO:0033499":null}}


id: PBO:0072078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 8","termid":"PBO:0072078"}


id: PBO:0057009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mir-100-let-7a-2-mir-125b-1 cluster host gene","termid":"PBO:0057009"}


id: MOD:01919
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to (2S,3S)-3-hydroxyaspartic acid.","definition_xrefs":["ChEBI:138111","PubMed:21177872","RESID:AA0579","ChEBI:10696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-hydroxy-L-aspartic acid","termid":"MOD:01926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3S)-3-hydroxyaspartic acid","synonyms":[{"name":"(2S,3S)-2-amino-3-hydroxybutanedioic acid","type":"exact"},{"name":"(2S,3S)-3-hydroxyaspartic acid","type":"exact"},{"name":"(3S)-3-hydroxy-L-aspartic acid","type":"exact"},{"name":"2-amino-3-hydroxysuccinic acid","type":"exact"},{"name":"2-azanyl-3-hydroxybutanedioic acid","type":"exact"},{"name":"3-hydroxyaspartic acid","type":"exact"},{"name":"L-threo-3-hydroxyaspartic acid","type":"exact"},{"name":"L-threo-beta-hydroxyaspartic acid","type":"exact"},{"name":"MOD_RES (3S)-3-hydroxyaspartate","type":"exact"}],"termid":"MOD:01919"}


id: MONDO:0001992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the rete testis","direct_ancestors":[{"relation_name":"is_a","term_name":"rete testis neoplasm","termid":"MONDO:0003562"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rete testis adenocarcinoma","secondary_identifiers":["DOID:14544","UMLS:C0863024","MEDGEN:209023","NCIT:C8955"],"synonyms":[{"name":"adenocarcinoma of rete testis","type":"exact"},{"name":"adenocarcinoma of the rete testis","type":"exact"},{"name":"carcinoma, rete testis, malignant","type":"exact"},{"name":"rete testis adenocarcinoma","type":"exact"}],"termid":"MONDO:0001992","xrefs":{"Monarch":{"xref_id":"0001992"}}}


id: PR:Q10085
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.06 gene.","definition_xrefs":["UniProtKB:Q10085","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C11D3.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.06","synonyms":[{"name":"Spom972h-SPAC11D3.06","type":"exact"}],"termid":"PR:Q10085"}


id: MONDO:0014020
data:
  {"annotated_genes":["SJAG_00308"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85636],"is_not":false,"summary":null,"term":"MONDO:0014020"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00308":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 55","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:761342","GARD:17474","OMIM:615035","SCTID:723825006","UMLS:C3539506","DOID:0110807","Orphanet:320375"],"synonyms":[{"name":"SPG55","type":"exact"},{"name":"autosomal recessive spastic paraplegia 55","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 55","type":"exact"},{"name":"hereditary spastic paraplegia type 55","type":"exact"},{"name":"spastic paraplegia 55, autosomal recessive","type":"related"}],"termid":"MONDO:0014020","terms_by_termid":{"MONDO:0014020":null},"xrefs":{"Monarch":{"xref_id":"0014020"}}}


id: GO:0061605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP [molybdopterin-synthase sulfur-carrier protein]-Gly-Gly = diphosphate [molybdopterin-synthase sulfur-carrier protein]-Gly-Gly-AMP.","definition_xrefs":["PMID:18154309","PMID:22370186","EC:2.7.7.80","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"molybdopterin-synthase adenylyltransferase activity","secondary_identifiers":["RHEA:43616"],"termid":"GO:0061605"}


id: GO:0099543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by a soluble gas ligand crossing the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}


id: PBO:0005115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn8 (predicted)","termid":"PBO:0005115"}


id: MONDO:0007851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any keratoconus in which the cause of the disease is a mutation in the VSX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconus","termid":"MONDO:0015486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratoconus 1","secondary_identifiers":["MEDGEN:372103","MESH:C563649","OMIM:148300","UMLS:C1835677"],"synonyms":[{"name":"KTCN1","type":"related"},{"name":"VSX1 keratoconus (disease)","type":"exact"},{"name":"keratoconus (disease) caused by mutation in VSX1","type":"exact"},{"name":"keratoconus 1","type":"exact"},{"name":"keratoconus type 1","type":"exact"}],"termid":"MONDO:0007851","xrefs":{"Monarch":{"xref_id":"0007851"}}}


id: MONDO:0013225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital generalized lipodystrophy in which the cause of the disease is a mutation in the CAVIN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"excluded_subClassOf","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"congenital generalized lipodystrophy","termid":"MONDO:0006536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"congenital generalized lipodystrophy type 4","secondary_identifiers":["DOID:0111138","GARD:10937","MESH:C567642","OMIM:613327","Orphanet:228429","MEDGEN:412871","UMLS:C2750069"],"synonyms":[{"name":"BSCL4","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy type 4 with muscular dystrophy","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy, type 4, with muscular dystrophy","type":"related"},{"name":"CAVIN1 congenital generalised lipodystrophy (disease)","type":"exact"},{"name":"CAVIN1 congenital generalized lipodystrophy (disease)","type":"exact"},{"name":"CGL4","type":"exact"},{"name":"GCL4","type":"exact"},{"name":"congenital generalised lipodystrophy (disease) caused by mutation in CAVIN1","type":"exact"},{"name":"congenital generalized lipodystrophy (disease) caused by mutation in CAVIN1","type":"exact"},{"name":"generalised congenital lipodystrophy type 4","type":"exact"},{"name":"generalised congenital lipodystrophy with myopathy","type":"exact"},{"name":"generalized congenital lipodystrophy type 4","type":"exact"},{"name":"generalized congenital lipodystrophy with myopathy","type":"exact"},{"name":"lipodystrophy, Berardinelli-Seip congenital, type 4, with muscular dystrophy","type":"related"},{"name":"lipodystrophy, congenital generalized, type 4","type":"related"}],"termid":"MONDO:0013225","xrefs":{"Monarch":{"xref_id":"0013225"}}}


id: PBO:0051373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-34 (pseudogene)","termid":"PBO:0051373"}


id: SO:1000175
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variant that has not been characterized fully.","direct_ancestors":[{"relation_name":"is_a","term_name":"uncharacterized_chromosomal_mutation","termid":"SO:1000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially_characterized_chromosomal_mutation","synonyms":[{"name":"partially characterized chromosomal mutation","type":"exact"}],"termid":"SO:1000175"}


id: PBO:0036211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-two_Mei2_nuclear_dots_present_in_cell","termid":"PBO:0036211"}


id: PBO:0087451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex that inhibits sister chromatid cohesion; also negatively regulates chromosome condensation; inhibited by Eco1p-acetylated cohesin subunits Smc3p and Mcd1p; binds Smc3p ATPase head of cohesin; related to the human Wapl protein that controls the association of cohesin with chromatin","termid":"PBO:0087451"}


id: PBO:0067030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 43, pseudogene","termid":"PBO:0067030"}


id: MONDO:0007979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metachondromatosis (MC) is a rare disorder characterized by the presence of both multiple enchondromas and osteochondroma-like lesions.","definition_xrefs":["Orphanet:2499"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metachondromatosis","secondary_identifiers":["UMLS:C0410530","GARD:3560","MEDGEN:98377","SCTID:205481009","MESH:C562938","ICD9:756.59","OMIM:156250","DOID:0111512","icd11.foundation:1342578560"],"synonyms":[{"name":"METACHONDROMATOSIS","type":"related"},{"name":"METCDS","type":"related"},{"name":"metachondromatosis","type":"exact"}],"termid":"MONDO:0007979","xrefs":{"Monarch":{"xref_id":"0007979"}}}


id: GO:0021884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron development","termid":"GO:0021954"},{"relation_name":"part_of","term_name":"forebrain neuron differentiation","termid":"GO:0021879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain neuron development","termid":"GO:0021884"}


id: GO:0045133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxybenzoate + O2 = 2-hydroxy-3-(3-oxoprop-1-enyl)but-2-enedioate + H+.","definition_xrefs":["EC:1.13.11.14","RHEA:18477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2,3-dihydroxybenzoate 3,4-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R01507","MetaCyc:1.13.11.14-RXN"],"synonyms":[{"name":"2,3-dihydroxybenzoate 1,2-dioxygenase activity","type":"related"},{"name":"2,3-dihydroxybenzoate oxygenase activity","type":"related"},{"name":"2,3-dihydroxybenzoate:oxygen 3,4-oxidoreductase (decyclizing)","type":"related"},{"name":"2,3-dihydroxybenzoic oxygenase activity","type":"related"},{"name":"o-pyrocatechuate oxygenase activity","type":"related"}],"termid":"GO:0045133"}


id: GO:0045202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between an axon of one neuron and a dendrite of another neuron, a muscle fiber or a glial cell. As the axon approaches the synapse it enlarges into a specialized structure, the presynaptic terminal bouton, which contains mitochondria and synaptic vesicles. At the tip of the terminal bouton is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic terminal bouton secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.","definition_xrefs":["PMID:29383328","PMID:31998110","GOC:aruk","PMID:24619342","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction","termid":"GO:0030054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"synapse","secondary_identifiers":["Wikipedia:Chemical_synapse","NIF_Subcellular:sao914572699"],"synonyms":[{"name":"electrotonic synapse","type":"related"},{"name":"mixed synapse","type":"narrow"},{"name":"synaptic junction","type":"exact"}],"termid":"GO:0045202"}


id: PBO:0064904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 3 catalytic subunit gamma","termid":"PBO:0064904"}


id: PBO:0031516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_binding","termid":"PBO:0031516"}


id: GO:0016202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of striated muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"regulates","term_name":"striated muscle tissue development","termid":"GO:0014706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle tissue development","termid":"GO:0016202"}


id: PBO:0082548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall-related secretory glycoprotein; induced by nutrient deprivation-associated growth arrest and upon entry into stationary phase; may be involved in adaptation prior to stationary phase entry; protein demonstrates amyloid properties in vivo; YGP1 has a paralog, SPS100, that arose from the whole genome duplication","termid":"PBO:0082548"}


id: MONDO:0700110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease, non-human animal","termid":"MONDO:0700049"},{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia, non-human animal","termid":"MONDO:0700110","xrefs":{"Monarch":{"xref_id":"0700110"}}}


id: MOD:01914
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.","definition_xrefs":["PubMed:17516569","Unimod:907","PMID:743239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-hydroxy-L-lysine","termid":"MOD:00037"},{"relation_name":"is_a","term_name":"O-glycosylated residue","termid":"MOD:00396"},{"relation_name":"is_a","term_name":"galactosylated residue","termid":"MOD:00476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O5-galactosyl-L-hydroxylysine","synonyms":[{"name":"CARBOHYD O-linked (Gal) hydroxylysine","type":"exact"},{"name":"Galactosyl hydroxylysine","type":"related"},{"name":"OGal5HyLys","type":"exact"}],"termid":"MOD:01914"}


id: PBO:0087405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate receptor of the glucose-induced degradation-deficient (GID) complex that targets gluconeogenic enzymes for proteasomal degradation upon switch from ethanol to glucose as a carbon source; overexpression causes a cell cycle delay or arrest; null mutation results in a decrease in plasma membrane electron transport; protein abundance increases in response to DNA replication stress","termid":"PBO:0087405"}


id: PBO:0056940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9-1","termid":"PBO:0056940"}


id: GO:0035760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the cytoplasm and resulting in the breakdown of a ribosomal RNA (rRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target rRNA truncated degradation intermediate.","definition_xrefs":["PMID:20368444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA catabolic process","termid":"GO:0016075"},{"relation_name":"is_a","term_name":"polyadenylation-dependent ncRNA catabolic process","termid":"GO:0043634"},{"relation_name":"is_a","term_name":"cytoplasmic polyadenylation-dependent RNA catabolic process","termid":"GO:0180018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic polyadenylation-dependent rRNA catabolic process","synonyms":[{"name":"cytoplasmic poly(A)-dependent rRNA catabolic process","type":"related"}],"termid":"GO:0035760"}


id: GO:0051511
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of unidimensional cell growth, the process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell morphogenesis","termid":"GO:0010771"},{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of unidimensional cell growth","termid":"GO:0051510"},{"relation_name":"negatively_regulates","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of unidimensional cell growth","type":"exact"},{"name":"down-regulation of unidimensional cell growth","type":"exact"},{"name":"downregulation of unidimensional cell growth","type":"exact"},{"name":"inhibition of unidimensional cell growth","type":"narrow"},{"name":"negative regulation of cell elongation","type":"narrow"}],"termid":"GO:0051511","terms_by_termid":{"GO:0051517":null}}


id: PATO:0001827
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of one sex and external sexual characteristics of the other sex.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic sex","termid":"PATO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudohermaphrodite","termid":"PATO:0001827"}


id: PBO:0018200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transmembrane transporter Amt1","termid":"PBO:0018200"}


id: MONDO:0011504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"NDE1-related microhydranencephaly is a rare, hereditary syndrome with a central nervous system malformation as major feature characterized by extreme microcephaly and growth restriction, severe motor delay and mental retardation, and typical radiological findings of gross dilation of the ventricles resulting from the absence (or severe delay in the development) of cerebral hemispheres, hypoplasia of the corpus callosum, cerebellum, and brainstem. Associated features are thin bones and scalp rugae.","definition_xrefs":["Orphanet:443162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporadic fetal brain disruption sequence","termid":"MONDO:0015660"},{"relation_name":"is_a","term_name":"microcephaly with lissencephaly and/or hydranencephaly","termid":"MONDO:0700116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"NDE1-related microhydranencephaly","secondary_identifiers":["GARD:10216","UMLS:C1857977","MEDGEN:341899","MESH:C537555","OMIM:605013"],"synonyms":[{"name":"MHAC","type":"exact"},{"name":"hydranencephaly and microcephaly","type":"related"},{"name":"microhydranencephaly","type":"related"}],"termid":"MONDO:0011504","xrefs":{"Monarch":{"xref_id":"0011504"}}}


id: PBO:0005507
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GPI8","termid":"PBO:0005507"}


id: PBO:0083948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma subunit of the F1 sector of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis","termid":"PBO:0083948"}


id: PBO:0117440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone-MAPK scaffold Sms1","termid":"PBO:0117440"}


id: PR:Q9HGP0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mbx2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGP0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor pvg4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC317.01","synonyms":[{"name":"MADS-box transcription factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PvGal synthesis protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mbx2","type":"exact"},{"name":"pyruvylated Gal-beta-1,3-epitope synthesis protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGP0"}


id: GO:0016061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of light-activated channel activity.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of light-activated channel activity (obsolete GO:0016061)","termid":"GO:0016061"}


id: PBO:0029398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleoplasm","termid":"PBO:0029398"}


id: GO:0032178
data:
  {"annotated_genes":["SJAG_04673","SJAG_02916","SJAG_03596","SJAG_01353","SJAG_04637","SJAG_04167","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92737,92927,97323,100676,100995,112649,114680],"is_not":false,"summary":null,"term":"GO:0032178"}]},"cv_name":"cellular_component","definition":"A sterol-rich region of the plasma membrane which forms at the cell surface overlying the contractile ring and spreads into the invaginating plasma membrane surrounding the septum.","definition_xrefs":["PMID:15517003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01353":null,"SJAG_02916":null,"SJAG_03596":null,"SJAG_04167":null,"SJAG_04637":null,"SJAG_04668":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"medial membrane band","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sterol-rich membrane band","type":"related"}],"termid":"GO:0032178","terms_by_termid":{"GO:0032178":null}}


id: GO:0140397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reactions: versiconal hemiacetal acetate + H2O = versiconal + acetate, as well as versiconol acetate + H2O = versiconol + acetate.","definition_xrefs":["EC:3.1.1.94","PMID:15932995","PMID:8368837","PMID:15006741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"versiconal hemiacetal acetate esterase activity","termid":"GO:0140397"}


id: PBO:0040633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BarH like homeobox 2","termid":"PBO:0040633"}


id: GO:0006971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hypotonic environment, i.e. an environment with a lower concentration of solutes than the organism or cell.","definition_xrefs":["PMID:12598593","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypotonic response","synonyms":[{"name":"hypo-osmotic response","type":"exact"}],"termid":"GO:0006971"}


id: PBO:0045089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal-less homeobox 1","termid":"PBO:0045089"}


id: PBO:0111943
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonuclease_3 family","termid":"PBO:0111943"}


id: PR:O00084
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ure2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O00084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.11c","synonyms":[{"name":"Spom972h-ure2","type":"exact"},{"name":"urea amidohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O00084"}


id: PBO:0070686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 57","termid":"PBO:0070686"}


id: GO:0030751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + licodione = 2'-O-methyllicodione + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.65","RHEA:18521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"licodione 2'-O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03623","MetaCyc:LICODIONE-2-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:licodione 2'-O-methyltransferase activity","type":"related"}],"termid":"GO:0030751"}


id: GO:0003217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a cardiac right atrium from unspecified parts.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac atrium formation","termid":"GO:0003210"},{"relation_name":"part_of","term_name":"cardiac right atrium morphogenesis","termid":"GO:0003213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac right atrium formation","termid":"GO:0003217"}


id: MONDO:0001595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurological condition affecting the involuntary movements. It is characterized by brief, non-repetitive irregular muscle contractions. It is seen in patients with Huntington's disease.","definition_xrefs":["NCIT:C84633"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Huntington disease-like syndrome","termid":"MONDO:0015548"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choreatic disease","secondary_identifiers":["MESH:D002819","MEDGEN:3420","Orphanet:1429","HP:0002072","ICD9:333.5","SCTID:230306001","DOID:12859","icd11.foundation:829618737","UMLS:C0008489","GARD:15152","EFO:0004152","SCTID:230298007"],"synonyms":[{"name":"BHC","type":"narrow"},{"name":"Bch","type":"related"},{"name":"benign familial chorea","type":"exact"},{"name":"chorea, benign hereditary","type":"narrow"},{"name":"hereditary benign chorea","type":"narrow"},{"name":"hereditary chorea","type":"related"},{"name":"hereditary progressive chorea without dementia","type":"narrow"}],"termid":"MONDO:0001595","xrefs":{"Monarch":{"xref_id":"0001595"}}}


id: RO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"},{"relation_name":"is_a","term_name":"causal_agent_in","termid":"RO:0002500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_part_of","termid":"RO:0002216"}


id: MONDO:0100065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tyrosine hydroxylase deficiency with onset typically between age three and 12 months. Motor milestones are overtly delayed in this severe form. Affected infants demonstrate truncal hypotonia and parkinsonian symptoms and signs (hypokinesia, rigidity of extremities, and/or tremor).","definition_xrefs":["PMID:20301610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine hydroxylase deficiency","termid":"MONDO:0100064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"TH-deficient infantile parkinsonism and motor delay","synonyms":[{"name":"tyrosine hydroxylase infantile parkinsonism and motor delay","type":"exact"}],"termid":"MONDO:0100065","xrefs":{"Monarch":{"xref_id":"0100065"}}}


id: PBO:0079005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 5-1","termid":"PBO:0079005"}


id: MONDO:0006114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bladder squamous cell carcinoma (obsolete MONDO:0006114)","termid":"MONDO:0006114","xrefs":{"Monarch":{"xref_id":"0006114"}}}


id: PBO:0042744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein S","termid":"PBO:0042744"}


id: GO:0043425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a basic Helix-Loop-Helix (bHLH) superfamily of transcription factors, important regulatory components in transcriptional networks of many developmental pathways.","definition_xrefs":["PMID:9144210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor binding","termid":"GO:0140297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"bHLH transcription factor binding","termid":"GO:0043425"}


id: PBO:0059142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 9","termid":"PBO:0059142"}


id: PBO:0073364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family H member 1","termid":"PBO:0073364"}


id: PBO:0083117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication initiation protein; loads DNA pol epsilon onto pre-replication complexes at origins; checkpoint sensor recruited to stalled replication forks by the checkpoint clamp complex where it activates Mec1p; along with Rfa1p, binds to ultrafine anaphase bridges in mitotic cells and prevents accumulation of chromatin bridges by stimulating the Mec1p kinase and suppressing homologous recombination; ortholog of human TopBP1; forms nuclear foci upon DNA replication stress","termid":"PBO:0083117"}


id: PBO:0077439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 174","termid":"PBO:0077439"}


id: GO:0043085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of an enzyme.","definition_xrefs":["GOC:tb","GOC:ebc","GOC:vw","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"},{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of catalytic activity","secondary_identifiers":["GO:0048554"],"synonyms":[{"name":"activation of enzyme activity","type":"narrow"},{"name":"activation of metalloenzyme activity","type":"narrow"},{"name":"positive regulation of enzyme activity","type":"exact"},{"name":"positive regulation of metalloenzyme activity","type":"narrow"},{"name":"stimulation of enzyme activity","type":"narrow"},{"name":"stimulation of metalloenzyme activity","type":"narrow"},{"name":"up regulation of enzyme activity","type":"exact"},{"name":"up regulation of metalloenzyme activity","type":"narrow"},{"name":"up-regulation of enzyme activity","type":"exact"},{"name":"up-regulation of metalloenzyme activity","type":"narrow"},{"name":"upregulation of enzyme activity","type":"exact"},{"name":"upregulation of metalloenzyme activity","type":"narrow"}],"termid":"GO:0043085"}


id: GO:0043485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from endosomes to pigment granules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"part_of","term_name":"pigment granule maturation","termid":"GO:0048757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"endosome to pigment granule transport","termid":"GO:0043485"}


id: PBO:0083102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase and DNA-dependent ATPase; role in DNA repair and checkpoint recovery, in the proper timing of commitment to meiotic recombination and the Meiosis I to II transition; blocks trinucleotide repeat expansion; affects genome stability; disassembles Rad51p nucleoprotein filaments during meiotic recombination; stimulates Mus81p-Mms4p endonuclease activity independent of catalytic activity; ATPase and ssDNA translocating motor activities inhibited by Dmc1p; functional homolog of human RTEL1","termid":"PBO:0083102"}


id: PBO:0079288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 7","termid":"PBO:0079288"}


id: PR:O74976
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1827.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal-coenzyme A synthetase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.03c","synonyms":[{"name":"Spom972h-SPCC1827.03c","type":"exact"}],"termid":"PR:O74976"}


id: PBO:0058031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4252","termid":"PBO:0058031"}


id: MOD:01305
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N1'-hexosaminyl-L-tryptophan.","definition_xrefs":["Unimod:454#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminylated residue","termid":"MOD:00876"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N1'-hexosaminylated tryptophan","synonyms":[{"name":"HexN","type":"related"},{"name":"Hexosamine","type":"related"}],"termid":"MOD:01305"}


id: MONDO:0013258
data:
  {"annotated_genes":["SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87666],"is_not":false,"summary":null,"term":"MONDO:0013258"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04616":null},"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613410","UMLS:C3150677","MEDGEN:462027"],"synonyms":[{"name":"AUTS16","type":"related"},{"name":"autism susceptibility 16","type":"exact"},{"name":"autism with or without seizures","type":"related"},{"name":"autism, susceptibility to, 16","type":"exact"},{"name":"autism, susceptibility to, type 16","type":"exact"},{"name":"susceptibility to autism 16","type":"related"}],"termid":"MONDO:0013258","terms_by_termid":{"MONDO:0013258":null},"xrefs":{"Monarch":{"xref_id":"0013258"}}}


id: PBO:0047550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 8","termid":"PBO:0047550"}


id: PBO:0072158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 35","termid":"PBO:0072158"}


id: GO:0061899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 11-cis-retinal + 2 H+ + O2 + 2 reduced [adrenodoxin] = 11-cis-3,4-didehydro-retinal + 2 H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["PMID:27059013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"11-cis-retinal 3,4-desaturase activity","termid":"GO:0061899"}


id: GO:0052393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by host of symbiont defense response (obsolete GO:0052393)","synonyms":[{"name":"activation of symbiont defense response","type":"exact"}],"termid":"GO:0052393"}


id: PBO:0060055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 2","termid":"PBO:0060055"}


id: GO:0120124
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that primes vacuolar or vesicular membranes for fusion with other intracellular membranes, by promoting the dissociation of cis-SNARE complexes.","definition_xrefs":["GOC:lnp","PMID:9015301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"membrane fusion priming complex","synonyms":[{"name":"GATE-16 complex","type":"exact"},{"name":"LMA1 complex","type":"exact"}],"termid":"GO:0120124"}


id: PBO:0088835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding complex small subunit","termid":"PBO:0088835"}


id: MONDO:0054680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia","termid":"MONDO:0016648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"epiphyseal dysplasia, multiple, 7","secondary_identifiers":["MEDGEN:1620874","OMIM:617719","UMLS:C4540251","Orphanet:647676","DOID:0070302"],"synonyms":[{"name":"EDM7","type":"related"},{"name":"epiphyseal dysplasia, multiple, 7","type":"exact"},{"name":"multiple epiphyseal dysplasia 7","type":"related"},{"name":"multiple epiphyseal dysplasia type 7","type":"exact"}],"termid":"MONDO:0054680","xrefs":{"Monarch":{"xref_id":"0054680"}}}


id: MONDO:0018323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"HSD10 disease, neonatal type is the most severe form of HSD10 disease, a rare neurometabolic disorder. It is characterized by onset of severe metabolic/lactic acidosis, neurological and psychomotor delay, seizures and severe progressive hypertrophic cardiomyopathy in the neonatal period. Hepatic involvement and coagulopathy are rare. The disease is fatal within the first months of life.","definition_xrefs":["Orphanet:391457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"HSD10 mitochondrial disease","termid":"MONDO:0010327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"HSD10 disease, neonatal type","secondary_identifiers":["MEDGEN:1842355","UMLS:C5680026","GARD:17623"],"synonyms":[{"name":"2-methyl-3-hydroxybutyric aciduria, neonatal type","type":"exact"},{"name":"2-methyl-3-hydroxybutyryl-CoA dehydrogenase deficiency, neonatal type","type":"exact"},{"name":"HSD10 deficiency, neonatal type","type":"exact"},{"name":"MHBD deficiency, neonatal type","type":"exact"}],"termid":"MONDO:0018323","xrefs":{"Monarch":{"xref_id":"0018323"}}}


id: PBO:0054125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1491","termid":"PBO:0054125"}


id: GO:0004307
data:
  {"annotated_genes":["SJAG_04319"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93405],"is_not":false,"summary":null,"term":"GO:0004307"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-ethanolamine + 1,2-diacylglycerol = CMP + a phosphatidylethanolamine.","definition_xrefs":["EC:2.7.8.1","RHEA:32943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-alcohol phosphatidyltransferase activity","termid":"GO:0017169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016780","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ethanolaminephosphotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1482962","MetaCyc:ETHANOLAMINEPHOSPHOTRANSFERASE-RXN"],"synonyms":[{"name":"CDP-ethanolamine:1,2-diacylglycerol ethanolaminephosphotransferase activity","type":"related"},{"name":"CDPethanolamine diglyceride phosphotransferase activity","type":"related"},{"name":"EPT","type":"related"},{"name":"diacylglycerol ethanolaminephosphotransferase activity","type":"related"},{"name":"phosphorylethanolamine-glyceride transferase activity","type":"related"}],"termid":"GO:0004307","terms_by_termid":{"GO:0004307":null}}


id: PBO:0070557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 23","termid":"PBO:0070557"}


id: PBO:0083536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YAP1802/YGR241C","termid":"PBO:0083536"}


id: PBO:0052407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and short cytoplasmic tail 1","termid":"PBO:0052407"}


id: PBO:0082782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the telomerase holoenzyme; involved in telomere replication; synthesis of the full-length protein results from a programmed +1 ribosomal frameshift","termid":"PBO:0082782"}


id: GO:0001891
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An invagination of the cell membrane formed by an actin dependent process during phagocytosis. Following internalization it is converted into a phagosome.","definition_xrefs":["PMID:10358769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"phagocytic cup","termid":"GO:0001891"}


id: PBO:0039725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3G","termid":"PBO:0039725"}


id: GO:0033642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host response to gravitational stimulus (obsolete GO:0033642)","synonyms":[{"name":"response to gravitational stimulus","type":"broad"}],"termid":"GO:0033642"}


id: PBO:0004948
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translocase of the Inner Membrane","termid":"PBO:0004948"}


id: PBO:0054923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2337","termid":"PBO:0054923"}


id: MONDO:1011787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative myopathy of deep pectoral muscle, non-human animal","secondary_identifiers":["OMIA:000264"],"termid":"MONDO:1011787","xrefs":{"Monarch":{"xref_id":"1011787"}}}


id: GO:0015728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mevalonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"mevalonate transport","termid":"GO:0015728"}


id: PBO:0002793
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.4","termid":"PBO:0002793"}


id: PBO:0036147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K36_methylation_during_vegetative_growth","termid":"PBO:0036147"}


id: GO:0050561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA(Glx) + L-glutamate + ATP = glutamyl-tRNA(Glx) + diphosphate + AMP.","definition_xrefs":["EC:6.1.1.24","MetaCyc:6.1.1.24-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0140098","GO:0003674","GO:0140101"],"is_obsolete":false,"name":"glutamate-tRNA(Gln) ligase activity","secondary_identifiers":["RHEA:18397"],"synonyms":[{"name":"L-glutamate:tRNAGlx ligase (AMP-forming)","type":"related"},{"name":"glutamate-tRNAGln ligase activity","type":"exact"},{"name":"nondiscriminating glutamyl-tRNA synthetase activity","type":"related"}],"termid":"GO:0050561"}


id: FYPO:0002672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing rapamycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on rapamycin","synonyms":[{"name":"normal cell population growth in presence of rapamycin","type":"exact"},{"name":"normal cell population growth on rapamycin","type":"exact"},{"name":"normal cellular response to rapamycin","type":"related"},{"name":"normal vegetative cell population growth on rapamycin","type":"exact"}],"termid":"FYPO:0002672"}


id: internal:related
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related","termid":"internal:related"}


id: GO:0019104
data:
  {"annotated_genes":["SJAG_02261","SJAG_01971","SJAG_02528","SJAG_03724","SJAG_01119"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034042"},{"annotations":[96479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034043"},{"annotations":[73947,74458,96480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034039"},{"annotations":[101896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052820"},{"annotations":[101897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008725"},{"annotations":[101898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043916"},{"annotations":[73949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000701"},{"annotations":[67452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004844"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of damaged bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site.","definition_xrefs":["GOC:elh","PMID:11554296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_01971":null,"SJAG_02261":null,"SJAG_02528":null,"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-110219","Reactome:R-HSA-9629483","Reactome:R-HSA-9629492","Reactome:R-HSA-9629499","Reactome:R-HSA-9629497","GO:0008578","Reactome:R-HSA-110250","Reactome:R-HSA-5649664","Reactome:R-HSA-9635996","Reactome:R-HSA-9636008","Reactome:R-HSA-5649658","Reactome:R-HSA-5220959","Reactome:R-HSA-110251","Reactome:R-HSA-5221061","Reactome:R-HSA-9629216","Reactome:R-HSA-110246","Reactome:R-HSA-5649673","Reactome:R-HSA-110218","Reactome:R-HSA-5649681","Reactome:R-HSA-110231","Reactome:R-HSA-9629149","Reactome:R-HSA-110232","Reactome:R-HSA-110248","Reactome:R-HSA-9629470","Reactome:R-HSA-110234"],"synonyms":[{"name":"DNA glycosylase activity","type":"exact"},{"name":"endonuclease VIII activity","type":"related"}],"termid":"GO:0019104","terms_by_termid":{"GO:0000701":null,"GO:0004844":null,"GO:0008725":null,"GO:0034039":null,"GO:0034042":null,"GO:0034043":null,"GO:0043916":null,"GO:0052820":null}}


id: PBO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosialidosis","termid":"PBO:0002343"}


id: PBO:0079264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 36","termid":"PBO:0079264"}


id: MOD:01268
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:271#T","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addition to cytopiloyne+H2O","termid":"MOD:00591"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O - site T","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:01268"}


id: GO:2000120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium-dependent phosphate transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of sodium-dependent phosphate transport","termid":"GO:2000118"},{"relation_name":"positively_regulates","term_name":"sodium-dependent phosphate transport","termid":"GO:0044341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sodium-dependent phosphate transport","termid":"GO:2000120"}


id: MONDO:0001006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"optic atrophy","termid":"MONDO:0003608"},{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucomatous atrophy of optic disk","secondary_identifiers":["SCTID:1207009","ICD9:377.14","MEDGEN:543288","DOID:10337","UMLS:C0271342"],"synonyms":[{"name":"glaucomatous atrophy [cupping] of optic disc","type":"exact"},{"name":"glaucomatous atrophy [cupping] of optic disk","type":"exact"}],"termid":"MONDO:0001006","xrefs":{"Monarch":{"xref_id":"0001006"}}}


id: PBO:0065573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin-endoperoxide synthase 1","termid":"PBO:0065573"}


id: PBO:0030681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell","termid":"PBO:0030681"}


id: MONDO:0008900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camptodactyly - fibrous tissue hyperplasia - skeletal dysplasia syndrome is an extremely rare chondrodysplastic malformation syndrome that is characterized by the combination of arachnodactyly, becoming evident at around the age of 10, camptodactyly (hammertoes) and scoliosis. A mild facial dysmorphism including a broad nose and flaring nostrils, and a mild intellectual disability were also noted. Camptodactyly - fibrous tissue hyperplasia - skeletal dysplasia syndrome has been described once in 3 siblings and is suspected to follow autosomal recessive transmission. There have been no further descriptions in the literature since 1972.","definition_xrefs":["Orphanet:1321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"camptodactyly with fibrous tissue hyperplasia and skeletal dysplasia","secondary_identifiers":["GARD:1064","MESH:C537974","MEDGEN:1848853","OMIM:211930","UMLS:C5848327"],"synonyms":[{"name":"camptodactyly with fibrous tissue hyperplasia and skeletal dysplasia","type":"exact"},{"name":"camptodactyly, fibrous tissue hyperplasia, and skeletal dysplasia","type":"related"}],"termid":"MONDO:0008900","xrefs":{"Monarch":{"xref_id":"0008900"}}}


id: PBO:0031082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_metabolism_phenotype","termid":"PBO:0031082"}


id: MONDO:0010837
data:
  {"annotated_genes":["SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[86021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"}]},"cv_name":"mondo","definition":"Hyperfunction of the parathyroid glands resulting in the overproduction of parathyroid hormone. It is caused by parathyroid adenoma, parathyroid hyperplasia, parathyroid carcinoma, and multiple endocrine neoplasia. It is associated with hypercalcemia and hypophosphatemia. Signs and symptoms include weakness, fatigue, nausea, vomiting, constipation, depression, bone pain, osteoporosis, cystic bone lesions, and kidney stones.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperparathyroidism","termid":"MONDO:0001741"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01151":null},"genotype_count":0,"is_obsolete":false,"name":"primary hyperparathyroidism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C48280","HP:0008200","UMLS:C0221002","EFO:0008519","MESH:D049950","SCTID:36348003","icd11.foundation:817194045","ICD9:252.01","MEDGEN:66354","DOID:11202"],"synonyms":[{"name":"primary hyperparathyroidism","type":"exact"},{"name":"primary hyperparathyroidism (disease)","type":"exact"}],"termid":"MONDO:0010837","terms_by_termid":{"MONDO:0007767":null,"MONDO:0007768":null},"xrefs":{"Monarch":{"xref_id":"0010837"}}}


id: FYPO:0008074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortical nodes is increased during mitotic interphase.","definition_xrefs":["PMID:10930468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to medial cortical node","termid":"FYPO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to medial cortical node during interphase","termid":"FYPO:0008074"}


id: SO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the reduction of a the 3' UTR with regard to the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3_prime_UTR_variant","termid":"SO:0001624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3_prime_UTR_truncation","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"3 prime UTR truncation","type":"exact"},{"name":"Jannovar:3_prime_utr_truncation","type":"exact"},{"name":"snpEff:UTR_3_DELETED","type":"exact"}],"termid":"SO:0002015"}


id: GO:0075289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a nonmotile, asexual spore is formed within a cell in certain algae and fungi (commonly in the Phycomycetes), the wall of aplanospore is distinct from that of the parent cell.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aplanospore formation","termid":"GO:0075289"}


id: PBO:0005325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 7 Mft1 (predicted)","termid":"PBO:0005325"}


id: GO:0045844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of striated muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle tissue development","termid":"GO:0016202"},{"relation_name":"is_a","term_name":"positive regulation of muscle organ development","termid":"GO:0048636"},{"relation_name":"is_a","term_name":"positive regulation of muscle tissue development","termid":"GO:1901863"},{"relation_name":"positively_regulates","term_name":"striated muscle tissue development","termid":"GO:0014706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of striated muscle tissue development","synonyms":[{"name":"activation of striated muscle development","type":"narrow"},{"name":"stimulation of striated muscle development","type":"narrow"},{"name":"up regulation of striated muscle development","type":"exact"},{"name":"up-regulation of striated muscle development","type":"exact"},{"name":"upregulation of striated muscle development","type":"exact"}],"termid":"GO:0045844"}


id: MONDO:0006029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the caecum","direct_ancestors":[{"relation_name":"is_a","term_name":"colon carcinoma","termid":"MONDO:0002032"},{"relation_name":"is_a","term_name":"cecum cancer","termid":"MONDO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"cecum carcinoma","secondary_identifiers":["EFO:1000021","MEDGEN:101762","NCIT:C3491","SCTID:255081007","UMLS:C0149640","DOID:1519"],"synonyms":[{"name":"caecum carcinoma","type":"exact"},{"name":"carcinoma of caecum","type":"exact"},{"name":"carcinoma of cecum","type":"exact"},{"name":"carcinoma of the cecum","type":"exact"},{"name":"cecal cancer","type":"broad"},{"name":"cecum cancer","type":"broad"},{"name":"cecum carcinoma","type":"exact"}],"termid":"MONDO:0006029","xrefs":{"Monarch":{"xref_id":"0006029"}}}


id: GO:0019464
data:
  {"annotated_genes":["SJAG_03861","SJAG_03641","SJAG_02901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74548,78318,96739],"is_not":false,"summary":null,"term":"GO:0019464"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycine by oxidative cleavage to carbon dioxide, ammonia, and a methylene group, mediated by enzymes of the glycine cleavage complex.","definition_xrefs":["MetaCyc:GLYCLEAV-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine catabolic process","termid":"GO:0006546"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02901":null,"SJAG_03641":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"glycine decarboxylation via glycine cleavage system","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycine cleavage system","type":"broad"}],"termid":"GO:0019464","terms_by_termid":{"GO:0019464":null}}


id: PBO:0083248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by expression profiling and mass spectrometry","termid":"PBO:0083248"}


id: PR:Q10290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mal2 gene.","definition_xrefs":["UniProtKB:Q10290","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein mal2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.14","synonyms":[{"name":"Spom972h-mal2","type":"exact"},{"name":"sim4 complex subunit mal2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10290"}


id: PBO:0032740
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, uncharacterized","termid":"PBO:0032740"}


id: MONDO:0016354
data:
  {"annotated_genes":["SJAG_02031","SJAG_02556","SJAG_03206","SJAG_00995"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012531"},{"annotations":[87030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010212"},{"annotations":[86989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010215"},{"annotations":[86940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010216"}]},"cv_name":"mondo","definition":"Xeroderma pigmentosum/Cockayne syndrome complex (XP/CS complex) is characterized by the cutaneous features of xeroderma pigmentosum (XP) together with the systemic and neurological features of Cockayne syndrome (CS).","definition_xrefs":["Orphanet:220295"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"excluded_subClassOf","term_name":"premature aging syndrome","termid":"MONDO:0019303"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary photodermatosis","termid":"MONDO:0015951"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00995":null,"SJAG_02031":null,"SJAG_02556":null,"SJAG_03206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"xeroderma pigmentosum-Cockayne syndrome complex","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:930080","ICD10CM:Q82.1","UMLS:C4304411","NCIT:C156031","icd11.foundation:2002862606","GARD:17130"],"synonyms":[{"name":"XP/CS complex","type":"exact"}],"termid":"MONDO:0016354","terms_by_termid":{"MONDO:0010212":null,"MONDO:0010215":null,"MONDO:0010216":null,"MONDO:0012531":null},"xrefs":{"Monarch":{"xref_id":"0016354"}}}


id: FYPO:0005629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein having high molecular mass due to polySUMO conjugation is greater than normal.","definition_xrefs":["PomBase:mah","PMID:26221037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular HMW SUMO conjugate level","synonyms":[{"name":"accumulation of HMW SUMO conjugates","type":"exact"},{"name":"accumulation of high molecular mass SUMO conjugates","type":"exact"},{"name":"accumulation of high molecular weight SUMO conjugates","type":"exact"},{"name":"increased HMW SUMO conjugate accumulation","type":"related"},{"name":"increased cellular HMW SUMO conjugate level during mitotic cell cycle","type":"related"},{"name":"increased cellular HMW SUMO conjugate level during vegetative growth","type":"exact"},{"name":"increased cellular high molecular mass SUMO conjugate level during vegetative growth","type":"exact"},{"name":"increased cellular high molecular weight SUMO conjugate level during vegetative growth","type":"exact"}],"termid":"FYPO:0005629"}


id: GO:0004516
data:
  {"annotated_genes":["SJAG_03298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80286],"is_not":false,"summary":null,"term":"GO:0004516"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinate + 5-phospho-alpha-D-ribose 1-diphosphate + ATP + H2O = nicotinate beta-D-ribonucleotide + ADP + phosphate + diphosphate.","definition_xrefs":["RHEA:36163","PMID:7503993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nicotinate phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:NICOTINATEPRIBOSYLTRANS-RXN","Reactome:R-HSA-197186","EC:6.3.4.21","KEGG_REACTION:R01724"],"synonyms":[{"name":"niacin ribonucleotidase activity","type":"related"},{"name":"nicotinate-nucleotide:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"nicotinic acid mononucleotide glycohydrolase activity","type":"related"},{"name":"nicotinic acid mononucleotide pyrophosphorylase activity","type":"related"},{"name":"nicotinic acid phosphoribosyltransferase activity","type":"related"}],"termid":"GO:0004516","terms_by_termid":{"GO:0004516":null}}


id: GO:0030650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving peptides with antibiotic activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antibiotic metabolic process","synonyms":[{"name":"peptide antibiotic metabolism","type":"exact"}],"termid":"GO:0030650"}


id: PBO:0051290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-8","termid":"PBO:0051290"}


id: GO:1902100
data:
  {"annotated_genes":["SJAG_03353","SJAG_04699","SJAG_04126","SJAG_02336","SJAG_01837","SJAG_04884","SJAG_01679","SJAG_01297","SJAG_02451","SJAG_03327","SJAG_03681","SJAG_04259","SJAG_04999","SJAG_00883","SJAG_01082","SJAG_01515","SJAG_03126","SJAG_02169","SJAG_01330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108563,99912,116202,104208,112268,91063,114086,107544,114574],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[114801,106634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[116969,75747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[99756,115859,106636,110213,114804,102113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[99017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[94538],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[114091],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[116976],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[101655],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metaphase/anaphase transition of cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle phase transition","termid":"GO:1901988"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902099"},{"relation_name":"negatively_regulates","term_name":"metaphase/anaphase transition of cell cycle","termid":"GO:0044784"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of metaphase/anaphase transition of cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of metaphase/anaphase transition of cell cycle","type":"exact"},{"name":"down-regulation of metaphase/anaphase transition of cell cycle","type":"exact"},{"name":"downregulation of metaphase/anaphase transition of cell cycle","type":"exact"},{"name":"inhibition of metaphase/anaphase transition of cell cycle","type":"narrow"}],"termid":"GO:1902100","terms_by_termid":{"GO:0007094":null,"GO:0033316":null,"GO:0090267":null,"GO:0140499":null,"GO:1902103":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0081708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 628","termid":"PBO:0081708"}


id: PBO:0070672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 43","termid":"PBO:0070672"}


id: PBO:0087261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase of the the RAM signaling network; Ndr/LATS family member; binds regulatory subunit Mob2p; involved in regulation of cellular morphogenesis, polarized growth, and septum destruction; phosphorylation by Cbk1p regulates localization and activity of Ace2p transcription factor and Ssd1p translational repressor; Cbk1p activity is regulated by both phosphorylation and specific localization; relocalizes to cytoplasm upon DNA replication stress","termid":"PBO:0087261"}


id: GO:0002414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting immunoglobulin, via transcytosis, from one side of an epithelial cell to the other.","definition_xrefs":["GOC:add","PMID:16048543","ISBN:081533642X","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcytosis","termid":"GO:0045056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"immunoglobulin transcytosis in epithelial cells","termid":"GO:0002414"}


id: PBO:0088184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-finger DNA-binding transcription factor; involved in transcriptional regulation of the methionine biosynthetic genes; targets strong transcriptional activator Met4p to promoters of sulfur metabolic genes; feedforward loop exists in the regulation of genes controlled by Met4p and Met32p; lack of such a loop for MET31 may account for the differential actions of Met32p and Met31p; MET32 has a paralog, MET31, that arose from the whole genome duplication","termid":"PBO:0088184"}


id: PBO:0016892
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AUreobasidin A Resistance","termid":"PBO:0016892"}


id: GO:2000327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ligand-dependent nuclear receptor transcription coactivator activity.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of nuclear receptor transcription coactivator activity (obsolete GO:2000327)","synonyms":[{"name":"positive regulation of ligand-dependent nuclear receptor transcription co-activator activity","type":"exact"},{"name":"positive regulation of ligand-dependent nuclear receptor transcription coactivator activity","type":"exact"}],"termid":"GO:2000327"}


id: PBO:0001289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damaged DNA binding protein Ddb1","termid":"PBO:0001289"}


id: PBO:0083918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Forms dehydrodolichyl diphosphate synthase complex with RER2 or SRT1; tet-repressible mutant shows accumulation of hypoglycosylated forms of CPY, suggesting that Nus1p may be involved in protein trafficking; mutations in human homolog NUS1 have been implicated in congenital scoliosis, neurological impairment, refractory epilepsy, hearing deficit, and visual impairment; human cis-prenyltransferase complex complements yeast null mutant","termid":"PBO:0083918"}


id: PBO:0028785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_protein_coding_gene","termid":"PBO:0028785"}


id: MONDO:0004428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, well circumscribed lung neoplasm morphologically characterized by the presence of cystic spaces resembling alveoli, lined by a simple cuboidal epithelium. The cystic spaces are surrounded by a spindle cell stroma which may show myxoid changes. It is a solitary, usually peripheral lung lesion. Patients are usually asymptomatic and its discovery is an incidental finding during chest X-ray examination. Surgical excision is curative.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung adenoma","termid":"MONDO:0003422"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alveoli adenoma","secondary_identifiers":["DOID:8003","MEDGEN:137740","NCIT:C4140","UMLS:C0334303","ICDO:8251/0"],"synonyms":[{"name":"adenoma of alveoli","type":"exact"},{"name":"adenoma of the alveoli","type":"exact"},{"name":"adenoma, bronchioloalveolar, benign","type":"exact"},{"name":"alveolar adenoma","type":"exact"},{"name":"alveolar adenoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004428","xrefs":{"Monarch":{"xref_id":"0004428"}}}


id: GO:0048045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: all-trans-pentaprenyl diphosphate + isopentenyl diphosphate = all-trans-hexaprenyl diphosphate + diphosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-pentaprenyltranstransferase activity (obsolete GO:0048045)","synonyms":[{"name":"all-trans-hexaprenyl-diphosphate synthase activity","type":"related"},{"name":"all-trans-pentaprenyl-diphosphate:isopentenyl-diphosphate pentaprenyltranstransferase activity","type":"related"},{"name":"hexaprenyl diphosphate synthase activity","type":"related"},{"name":"hexaprenyl pyrophosphate synthetase activity","type":"exact"}],"termid":"GO:0048045"}


id: PBO:0048630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIT ArfGAP 1","termid":"PBO:0048630"}


id: PBO:0071606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 24","termid":"PBO:0071606"}


id: PBO:0091239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zn(2)-C6 fungal-type, truncated","termid":"PBO:0091239"}


id: PBO:0067513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 654, pseudogene","termid":"PBO:0067513"}


id: PBO:0085774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein localized to COPII vesicles; proposed to be involved in ER to Golgi transport; interacts with members of the Rab GTPase family and Yip1p; also interacts with Rtn1p","termid":"PBO:0085774"}


id: PBO:0000838
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.7.1","termid":"PBO:0000838"}


id: PR:Q09760
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cullin-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11932:SF23","OMA:SCHPO00186","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin-3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.03","secondary_identifiers":["UniProtKB:Q09760"],"synonyms":[{"name":"Cul-3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CUL3","type":"exact"}],"termid":"PR:Q09760"}


id: MONDO:0003809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant hemangiopericytoma arising in the mediastinum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mediastinum sarcoma","termid":"MONDO:0002852"},{"relation_name":"is_a","term_name":"hemangiopericytoma, malignant","termid":"MONDO:0009330"},{"relation_name":"is_a","term_name":"neoplasm of mediastinum","termid":"MONDO:0021386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant mediastinum hemangiopericytoma","secondary_identifiers":["DOID:6209","UMLS:C1334598","MEDGEN:235298","NCIT:C6608"],"synonyms":[{"name":"malignant hemangiopericytoma of mediastinum","type":"exact"},{"name":"malignant hemangiopericytoma of the mediastinum","type":"exact"},{"name":"malignant mediastinal hemangiopericytoma","type":"exact"},{"name":"mediastinum hemangiopericytoma","type":"exact"},{"name":"mediastinum spindle cell tumor","type":"exact"},{"name":"mediastinum spindle cell tumour","type":"exact"}],"termid":"MONDO:0003809","xrefs":{"Monarch":{"xref_id":"0003809"}}}


id: GO:0031447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of fast-twitch skeletal muscle contraction.","definition_xrefs":["GOC:dph","GOC:ef","GOC:mtg_muscle","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fast-twitch skeletal muscle fiber contraction","termid":"GO:0031446"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"},{"relation_name":"negatively_regulates","term_name":"fast-twitch skeletal muscle fiber contraction","termid":"GO:0031443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fast-twitch skeletal muscle fiber contraction","synonyms":[{"name":"down regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"down-regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"downregulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"inhibition of fast-twitch skeletal muscle contraction","type":"narrow"},{"name":"negative regulation of fast-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031447"}


id: PBO:0054956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2370","termid":"PBO:0054956"}


id: MONDO:0016127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"bacterial myositis","secondary_identifiers":["Orphanet:206994","icd11.foundation:1277815767","GARD:20378","MEDGEN:538237","UMLS:C0263979","SCTID:30330001"],"termid":"MONDO:0016127","xrefs":{"Monarch":{"xref_id":"0016127"}}}


id: PBO:0060698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3 pseudogene 6","termid":"PBO:0060698"}


id: SO:0000508
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one D-gene, one DJ-gene, and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_DJ_J_cluster","synonyms":[{"name":"D DJ J cluster","type":"exact"},{"name":"D-(DJ)-J-CLUSTER","type":"exact"}],"termid":"SO:0000508"}


id: MONDO:0012301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myopathic mitochondrial DNA (mtDNA) depletion syndrome is one of the main forms of mtDNA depletion syndrome that displays a broad phenotypic spectrum but that is most often characterized by hypotonia, proximal muscle weakness, facial and bulbar weakness and failure to thrive.","definition_xrefs":["Orphanet:254875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"},{"relation_name":"is_a","term_name":"inborn disorder of pyrimidine metabolism","termid":"MONDO:0019238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0019254","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome, myopathic form","secondary_identifiers":["MESH:C563698","MEDGEN:461100","OMIM:609560","DOID:0080120","UMLS:C3149750","icd11.foundation:294556832","SCTID:703527003","ICD9:359.89","GARD:17228"],"synonyms":[{"name":"MTDPS2","type":"related"},{"name":"mitochondrial DNA depletion myopathy, Tk2-related","type":"related"},{"name":"mitochondrial DNA depletion syndrome 2","type":"related"},{"name":"mitochondrial DNA depletion syndrome 2 (myopathic type)","type":"related"},{"name":"mitochondrial DNA depletion syndrome type 2","type":"exact"},{"name":"mtDNA depletion syndrome, myopathic form","type":"exact"}],"termid":"MONDO:0012301","xrefs":{"Monarch":{"xref_id":"0012301"}}}


id: FYPO:0001456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to endoplasmic reticulum stress is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"increased RNA accumulation during cellular response to endoplasmic reticulum stress","type":"related"},{"name":"increased RNA level during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"},{"name":"increased RNA level during response to ER stress","type":"exact"},{"name":"increased RNA level under ER stress-inducing conditions","type":"related"},{"name":"increased mRNA level during cellular response to endoplasmic reticulum stress","type":"narrow"},{"name":"increased transcript level during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"increased unfolded protein response","type":"related"}],"termid":"FYPO:0001456"}


id: FYPO:0008170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is decreased.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased cyclin-dependent protein kinase activity","termid":"FYPO:0008170"}


id: PBO:0058558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6500","termid":"PBO:0058558"}


id: PBO:0049955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 1","termid":"PBO:0049955"}


id: FYPO:0002045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells show decreased sensitivity to heat shock. Heat shock is a form of heat stress in which cells are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress","termid":"FYPO:0002046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to heat shock","synonyms":[{"name":"increased cell population growth during cellular response to heat shock","type":"exact"},{"name":"increased growth during cellular response to heat shock","type":"exact"},{"name":"resistant to heat shock","type":"exact"}],"termid":"FYPO:0002045"}


id: PBO:0079398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 5","termid":"PBO:0079398"}


id: MONDO:0024625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that involves the lacrimal gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"disorder of lacrimal gland","secondary_identifiers":["MEDGEN:536365","SCTID:95766002","UMLS:C0235228"],"synonyms":[{"name":"disease of lacrimal gland","type":"exact"},{"name":"disease or disorder of lacrimal gland","type":"exact"},{"name":"disorder of lacrimal gland","type":"exact"},{"name":"lacrimal gland disease","type":"exact"},{"name":"lacrimal gland disease or disorder","type":"exact"}],"termid":"MONDO:0024625","xrefs":{"Monarch":{"xref_id":"0024625"}}}


id: PBO:0029935
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_spheroid_cell","termid":"PBO:0029935"}


id: PBO:0116714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH eRNA associated with R-loop formation 1","termid":"PBO:0116714"}


id: PBO:0017467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-functionally_related_to","termid":"PBO:0017467"}


id: PBO:0004565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"response regulator Mcs4","termid":"PBO:0004565"}


id: PBO:0030298
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_interphase_cytoplasmic_microtubules","termid":"PBO:0030298"}


id: GO:0160251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues, occurring through dextrin derivative intermediates.","definition_xrefs":["MetaCyc:PWY-5941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen catabolic process","termid":"GO:0005980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0006091"],"is_obsolete":false,"name":"glycogen catabolic process via dextrin","termid":"GO:0160251"}


id: PBO:0077347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 87B","termid":"PBO:0077347"}


id: PBO:0052589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore associated 1","termid":"PBO:0052589"}


id: PBO:0071823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 18","termid":"PBO:0071823"}


id: GO:0030915
data:
  {"annotated_genes":["SJAG_05323","SJAG_03436","SJAG_00213","SJAG_01776","SJAG_02545","SJAG_01332","SJAG_04932","SJAG_03702"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70593,72730,74657,74818,75619,88383,111794,118163],"is_not":false,"summary":null,"term":"GO:0030915"}]},"cv_name":"cellular_component","definition":"A conserved complex that contains a heterodimer of SMC proteins (Smc5p and Smc6p, or homologs thereof) and several other proteins, and is involved in DNA repair and maintaining cell cycle arrest following DNA damage. In S. cerevisiae, this is an octameric complex called Mms21-Smc5-Smc6 complex, with at least five of its subunits conserved in fission yeast and humans.","definition_xrefs":["PMID:15738391","PMID:14701739","GOC:rb","PMID:27373152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO ligase complex","termid":"GO:0106068"},{"relation_name":"part_of","term_name":"condensed chromosome","termid":"GO:0000793"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00213":null,"SJAG_01332":null,"SJAG_01776":null,"SJAG_02545":null,"SJAG_03436":null,"SJAG_03702":null,"SJAG_04932":null,"SJAG_05323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Smc5-Smc6 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030915","terms_by_termid":{"GO:0030915":null}}


id: GO:0015790
data:
  {"annotated_genes":["SJAG_00434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66569],"is_not":false,"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of UDP-xylose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. UDP-xylose is a substance composed of xylose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"UDP-xylose transmembrane transport","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"UDP-xylose transport","type":"related"}],"termid":"GO:0015790","terms_by_termid":{"GO:0015790":null}}


id: PBO:0078795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 16-2","termid":"PBO:0078795"}


id: MONDO:0007984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaphyseal dysplasia-maxillary hypoplasia-brachydacty syndrome is characterized by metaphyseal dysplasia associated with short stature and facial dysmorphism (a beaked nose, short philtrum, thin lips, maxillary hypoplasia, dystrophic yellowish teeth) and acral anomalies (short fifth metacarpals and/or short middle phalanges of fingers two and five). It has been described in several members spanning four generations of a French-Canadian family. The syndrome is likely to be transmitted as an autosomal dominant trait.","definition_xrefs":["Orphanet:2504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal dysplasia-maxillary hypoplasia-brachydacty syndrome","secondary_identifiers":["DOID:0111513","MEDGEN:762788","GARD:3568","UMLS:C3549874","OMIM:156510"],"synonyms":[{"name":"MDMHB","type":"related"},{"name":"metaphyseal dysplasia maxillary hypoplasia brachydactyly","type":"related"},{"name":"metaphyseal dysplasia with maxillary hypoplasia with or without brachydactyly","type":"related"}],"termid":"MONDO:0007984","xrefs":{"Monarch":{"xref_id":"0007984"}}}


id: PR:O13779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A2.14 gene.","definition_xrefs":["UniProtKB:O13779","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal ion transporter C17A12.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.14","synonyms":[{"name":"Spom972h-SPAC17A2.14","type":"exact"}],"termid":"PR:O13779"}


id: GO:0008539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the proteasome complex. The proteasome complex performs regulated ubiquitin-dependent cytosolic and nuclear proteolysis.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome inhibitor activity (obsolete GO:0008539)","synonyms":[{"name":"PI-31","type":"narrow"},{"name":"proteasome inhibitor activity","type":"exact"}],"termid":"GO:0008539"}


id: MONDO:0009742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Elejalde syndrome (ES) is characterized by silvery to leaden hair, bronze skin color in sun-exposed areas and severe neurological impairment.","definition_xrefs":["Orphanet:33445"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"excluded_subClassOf","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroectodermal melanolysosomal disease","secondary_identifiers":["MEDGEN:348553","MESH:C536203","GARD:16630","OMIM:256710","SCTID:724091002","UMLS:C1860157","icd11.foundation:771734461"],"synonyms":[{"name":"ELEJALDE disease","type":"related"},{"name":"Elejalde disease","type":"exact"},{"name":"neuroectodermal melanolysosomal disease","type":"exact"}],"termid":"MONDO:0009742","xrefs":{"Monarch":{"xref_id":"0009742"}}}


id: PBO:0081589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF516 antisense RNA 1","termid":"PBO:0081589"}


id: MONDO:0000728
data:
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id: PBO:0067997
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id: GO:1900239
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id: GO:0006364
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id: GO:0061446
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id: PBO:0049225
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id: GO:2000880
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id: PBO:0052237
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id: PR:O94705
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id: GO:0034398
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id: MONDO:0007642
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id: PBO:0051058
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id: PBO:0078378
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id: MONDO:0014024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 43 is a rare, complex hereditary spastic paraplegia characterized by a childhood to adolescent onset of progressive lower limb spasticity, associated with mild to severe gait disturbances, extensor plantar responses, muscle weakness and severe distal atrophy, frequently with upper limb involvement. Additional features may include joint contractures, distal sensory loss and brisk or absent deep tendon reflexes. Other signs, such as depression, memory loss, optic atrophy (with vision loss) and brain iron deposition (revealed by brain imagery), have also been reported.","definition_xrefs":["Orphanet:320370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 43","secondary_identifiers":["OMIM:615043","SCTID:764736001","UMLS:C2680446","DOID:0110795","GARD:17473","MEDGEN:760531"],"synonyms":[{"name":"C19orf12 autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"SPG43","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in C19orf12","type":"exact"},{"name":"autosomal recessive spastic paraplegia 43","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 43","type":"exact"},{"name":"hereditary spastic paraplegia type 43","type":"exact"},{"name":"spastic paraplegia 43, autosomal recessive","type":"related"}],"termid":"MONDO:0014024","xrefs":{"Monarch":{"xref_id":"0014024"}}}


id: PBO:0043904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich secretory protein LCCL domain containing 1","termid":"PBO:0043904"}


id: PBO:0087792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E3 ligase; required for synaptonemal complex formation; localizes to synapsis initiation sites on meiotic chromosomes; associates with centromeres early in meiosis, then with chromosome axes and finally with double-strand break sites that are engaged in repair by crossovers; potential Cdc28p substrate","termid":"PBO:0087792"}


id: PBO:0041457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C10orf71 antisense RNA 1","termid":"PBO:0041457"}


id: PBO:0072635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras suppressor protein 1 pseudogene 1","termid":"PBO:0072635"}


id: GO:0031122
data:
  {"annotated_genes":["SJAG_02609","SJAG_02040","SJAG_02286","SJAG_04841","SJAG_02695","SJAG_03540","SJAG_01756","SJAG_02886","SJAG_02761","SJAG_02737","SJAG_00856","SJAG_03052","SJAG_00918","SJAG_04074","SJAG_04003","SJAG_01215","SJAG_01613","SJAG_03835","SJAG_02509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68417,71502,72086,80250,88097,97304,99542,100404,102637,102760,107735,112437,117488,118961],"is_not":false,"summary":null,"term":"GO:0031122"},{"annotations":[76687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[117241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030954"},{"annotations":[106762,100698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030953"},{"annotations":[107814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043622"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_00918":null,"SJAG_01215":null,"SJAG_01613":null,"SJAG_01756":null,"SJAG_02040":null,"SJAG_02286":null,"SJAG_02509":null,"SJAG_02609":null,"SJAG_02695":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03052":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04003":null,"SJAG_04074":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"cytoplasmic microtubule organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic microtubule organisation","type":"exact"},{"name":"cytoplasmic microtubule organization and biogenesis","type":"related"}],"termid":"GO:0031122","terms_by_termid":{"GO:0030953":null,"GO:0030954":null,"GO:0031122":null,"GO:0043622":null,"GO:0060172":null}}


id: PBO:0089223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Osh2","termid":"PBO:0089223"}


id: GO:0019185
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that recognizes the proximal sequence element of RNA polymerase II and III snRNA promoters.","definition_xrefs":["PMID:7715707","PMID:9003788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"snRNA-activating protein complex","synonyms":[{"name":"SNAPc","type":"exact"}],"termid":"GO:0019185"}


id: PBO:0071019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 21","termid":"PBO:0071019"}


id: PBO:0077520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 235","termid":"PBO:0077520"}


id: PBO:0043928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-reactive protein","termid":"PBO:0043928"}


id: PBO:0074483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 2","termid":"PBO:0074483"}


id: MONDO:0100386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(v;11q23.3). (A chromosomal abnormality consisting of the translocation of genetic material from any one of several chromosomes to the 11q23.3 region, resulting in an MLL gene rearrangement.)","definition_xrefs":["NCIT:C36517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, t(v;11q23.3)","synonyms":[{"name":"AML, 11q23.3 Translocation","type":"exact"},{"name":"AML, t(11;v)(q23.3;v)","type":"exact"},{"name":"AML, t(11;v)(q23;v)","type":"exact"},{"name":"AML, t(V;11)(v;q23)","type":"exact"},{"name":"AML, t(V;11)(v;q23.3)","type":"exact"},{"name":"AML, t(v;11q23.3)","type":"exact"}],"termid":"MONDO:0100386","xrefs":{"Monarch":{"xref_id":"0100386"}}}


