# terms

id: GO:0009901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dehiscence of an anther to release the pollen grains contained within it.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehiscence","termid":"GO:0009900"},{"relation_name":"part_of","term_name":"anther development","termid":"GO:0048653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther dehiscence","termid":"GO:0009901"}


id: PBO:0080317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 81 pseudogene","termid":"PBO:0080317"}


id: GO:0006292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The location of pyrimidine dimers by a large multienzyme complex that scans the DNA for distortions in the double helix caused by pyrimidine dimers.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrimidine-dimer repair, DNA damage recognition (obsolete GO:0006292)","synonyms":[{"name":"pyrimidine-dimer repair, DNA damage recognition","type":"exact"}],"termid":"GO:0006292"}


id: FYPO:0000157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which the response to DNA damage is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"abnormal response to DNA damage stimulus during vegetative growth","synonyms":[{"name":"abnormal response to DNA damage during vegetative growth","type":"exact"},{"name":"abnormal response to DNA damage stimulus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000157"}


id: MONDO:0013566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the FANCL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066","MONDO:0005570","MONDO:0005046","MONDO:0002280"],"is_obsolete":false,"name":"Fanconi anemia complementation group L","secondary_identifiers":["GARD:15754","DOID:0111082","MEDGEN:854018","UMLS:C3469528","OMIM:614083"],"synonyms":[{"name":"FANCL","type":"exact"},{"name":"FANCL Fanconi anaemia","type":"exact"},{"name":"FANCL Fanconi anemia","type":"exact"},{"name":"Fanconi Anemia, complementation Group 50","type":"related"},{"name":"Fanconi Anemia, complementation group type 50","type":"exact"},{"name":"Fanconi anaemia caused by mutation in FANCL","type":"exact"},{"name":"Fanconi anaemia complementation group type L","type":"exact"},{"name":"Fanconi anemia caused by mutation in FANCL","type":"exact"},{"name":"Fanconi anemia complementation group L","type":"exact"},{"name":"Fanconi anemia complementation group type L","type":"exact"},{"name":"Fanconi anemia, complementation group L","type":"related"}],"termid":"MONDO:0013566","xrefs":{"Monarch":{"xref_id":"0013566"}}}


id: GO:0075302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of basidiospore formation, a process in which a sexually produced fungal spore is formed on a basidium in the fungi Basidiomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"regulates","term_name":"basidiospore formation","termid":"GO:0034295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of basidiospore formation","termid":"GO:0075302"}


id: MONDO:0015634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A osteopoikilosis (disease) that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopoikilosis","termid":"MONDO:0001414"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated osteopoikilosis","secondary_identifiers":["GARD:17027","Orphanet:166119","MEDGEN:318940","UMLS:C1833699"],"synonyms":[{"name":"isolated osteopoikilosis (disease)","type":"exact"},{"name":"nonsyndromic osteopoikilosis (disease)","type":"exact"}],"termid":"MONDO:0015634","xrefs":{"Monarch":{"xref_id":"0015634"}}}


id: GO:0071091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha1-beta1 integrin complex bound to tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha1-beta1 integrin-tissue transglutaminase complex","synonyms":[{"name":"ITGA1-ITGB1-TGM2 complex","type":"narrow"}],"termid":"GO:0071091"}


id: GO:0160213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A beta-arrestin-dependent signaling pathway initiated by a dopamine binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:25671228","PMID:21711983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"cellular response to dopamine","termid":"GO:1903351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"beta-arrestin-dependent dopamine receptor signaling pathway","termid":"GO:0160213"}


id: PBO:0048330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 41","termid":"PBO:0048330"}


id: PBO:0026879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_regulation_during_cellular_response_to_latrunculin_A","termid":"PBO:0026879"}


id: PBO:0086908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative vacuolar membrane transporter for cationic amino acids; likely contributes to amino acid homeostasis by exporting cationic amino acids from the vacuole; member of the PQ-loop family, with seven transmembrane domains; similar to mammalian PQLC2 vacuolar transporter; YPQ1 has a paralog, RTC2, that arose from the whole genome duplication","termid":"PBO:0086908"}


id: PBO:0016558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hikeshi protein, Opi10","termid":"PBO:0016558"}


id: FYPO:0007065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 20S rRNA precursor measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah","PMID:29641590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"},{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"20S rRNA precursor absent from cell","synonyms":[{"name":"20S rRNA precursor absent from cell during mitotic cell cycle","type":"related"},{"name":"20S rRNA precursor absent from cell during vegetative growth","type":"exact"},{"name":"20S rRNA precursor transcripts absent from cell during vegetative growth","type":"exact"},{"name":"undetectable 20S rRNA precursor level during vegetative growth","type":"exact"}],"termid":"FYPO:0007065"}


id: GO:0160112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural network of microtubule inner proteins (MIPs) located inside the lumen of the B tubule of the axonemal microtubule doublet that helps stabilize the B tubule.","definition_xrefs":["PMID:29430673","GOC:krc","PMID:37295417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"A axonemal microtubule","termid":"GO:0097649"},{"relation_name":"part_of","term_name":"axonemal microtubule doublet inner sheath","termid":"GO:0160110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"axonemal B tubule inner sheath","termid":"GO:0160112"}


id: PBO:0061563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase ecto","termid":"PBO:0061563"}


id: PBO:0077699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNKS2 divergent transcript","termid":"PBO:0077699"}


id: MONDO:0043096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital acardia","termid":"MONDO:0022357"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holoacardius amorphus","secondary_identifiers":["MEDGEN:75621","Orphanet:2161","SCTID:41049003","UMLS:C0266719","GARD:2720"],"synonyms":[{"name":"Holoacardius amorphus","type":"exact"},{"name":"amorphous globosus","type":"related"},{"name":"amorphus globosus","type":"related"},{"name":"fetus anideus","type":"related"},{"name":"foetus anideus","type":"related"}],"termid":"MONDO:0043096","xrefs":{"Monarch":{"xref_id":"0043096"}}}


id: GO:0051301
data:
  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"summary":null,"term":"GO:0030994"},{"annotations":[118942,111112,92668],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904498"},{"annotations":[78579],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031991"},{"annotations":[94151,119711],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"},{"annotations":[117821,118994,90156,92185,109522,101261,107455,103806,77401],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902412"},{"annotations":[101706,88194,111684],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"},{"annotations":[108264],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905391"},{"annotations":[116122],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990344"},{"annotations":[102571,110945,92503,102560,102570,115951,95995,111765,87791],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000920"}]},"cv_name":"biological_process","definition":"The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells.","definition_xrefs":["GOC:go_curators","GOC:pr","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular 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id: GO:0036003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to stress (obsolete GO:0036003)","termid":"GO:0036003"}


id: GO:0017062
data:
  {"annotated_genes":["SJAG_05305","SJAG_04560","SJAG_01405","SJAG_01141","SJAG_03099"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107904,113158,78643,77200,60595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034551"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the cytochrome bc(1) complex, a transmembrane lipoprotein complex that it catalyzes the reduction of cytochrome c by accepting reducing equivalents from Coenzyme Q, by the aggregation, arrangement and bonding together of its constituents.","definition_xrefs":["PMID:20116362","PMID:12833641","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01141":null,"SJAG_01405":null,"SJAG_03099":null,"SJAG_04560":null,"SJAG_05305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"respiratory chain complex III assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"coenzyme Q and cytochrome c reductase complex assembly","type":"exact"},{"name":"coenzyme Q and cytochrome c reductase complex biogenesis","type":"exact"},{"name":"complex III assembly","type":"exact"},{"name":"complex III biogenesis","type":"exact"},{"name":"cytochrome bc(1) complex assembly","type":"exact"},{"name":"cytochrome bc(1) complex biogenesis","type":"exact"}],"termid":"GO:0017062","terms_by_termid":{"GO:0034551":null}}


id: MONDO:0008658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete virus Rd114 RNA Complementarity (obsolete MONDO:0008658)","secondary_identifiers":["OMIM:193070"],"synonyms":[{"name":"virus Rd114 RNA Complementarity","type":"exact"}],"termid":"MONDO:0008658","xrefs":{"Monarch":{"xref_id":"0008658"}}}


id: PBO:0082376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor of the yAP-1 family; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; mediates pleiotropic drug resistance and salt tolerance; nuclearly localized under oxidative stress and sequestered in the cytoplasm by Lot6p under reducing conditions; CIN5 has a paralog, YAP6, that arose from the whole genome duplication","termid":"PBO:0082376"}


id: MONDO:0019951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rigid spine syndrome (RSS) is a slowly progressive childhood-onset congenital muscular dystrophy characterized by contractures of the spinal extensor muscles associated with abnormal posture (limitation of neck and trunk flexure), progressive scoliosis of the spine, early marked cervico-axial muscle weakness with relatively preserved strength and function of the extremities and progressive respiratory insufficiency.","definition_xrefs":["Orphanet:97244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of desmin","termid":"MONDO:0016187"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of selenoprotein N1","termid":"MONDO:0016197"},{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"rigid spine syndrome","secondary_identifiers":["icd11.foundation:801727141","MESH:C535683","GARD:4723"],"synonyms":[{"name":"desmin-related myopathies with Mallory bodies","type":"related"},{"name":"muscular dystrophy, congenital, merosin positive with early spine rigidity","type":"related"},{"name":"rigid spine congenital muscular dystrophy","type":"exact"},{"name":"rigid spine muscular dystrophy-1","type":"related"}],"termid":"MONDO:0019951","xrefs":{"Monarch":{"xref_id":"0019951"}}}


id: PBO:0054971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2385","termid":"PBO:0054971"}


id: GO:0033265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to choline, the amine 2-hydroxy-N,N,N-trimethylethanaminium.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"choline binding","termid":"GO:0033265"}


id: PBO:0078262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 1-1","termid":"PBO:0078262"}


id: PBO:0060978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal guanine nucleotide exchange factor","termid":"PBO:0060978"}


id: GO:0100012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway process that regulates heart induction.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of heart induction by canonical Wnt signaling pathway (obsolete GO:0100012)","termid":"GO:0100012"}


id: MONDO:0013858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pontine tegmental cap dysplasia (PTCD) is a non-progressive neurological disorder characterized by significant developmental delay, cranial nerve dysfunction, and malformation of the hindbrain.Individuals with PTCD may have a collection of medical and developmental problems including: hearing impairment, ataxia,language and speech disorders, feeding and swallowingdifficulties, heartmalformations and facial paralysis.The severity of themedical problems varies among patients. Some patients have a good long-term prognosiswith normal intelligence and partial speech. The cause of PTCD has not been identified. Treatment is focused on managing the underlying symptoms and may include interventions such as cochlear implantation.","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontine tegmental cap dysplasia","secondary_identifiers":["MEDGEN:762040","GARD:10919","Orphanet:269229","UMLS:C3541340","OMIM:614688"],"synonyms":[{"name":"PONTINE tegmental CAP dysplasia","type":"related"},{"name":"PTCD","type":"exact"},{"name":"pontine tegmental cap dysplasia","type":"exact"}],"termid":"MONDO:0013858","xrefs":{"Monarch":{"xref_id":"0013858"}}}


id: GO:0007340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The discharge, by sperm, of a single, anterior secretory granule following the sperm's attachment to the zona pellucida of the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the exocytosis of the acrosomal contents into the zona pellucida.","definition_xrefs":["GOC:dph","PMID:21042299","PMID:11175768","PMID:3886029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acrosome reaction","secondary_identifiers":["Reactome:R-HSA-1300645","Wikipedia:Acrosome_reaction"],"termid":"GO:0007340"}


id: GO:0031378
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A fatty acid synthase complex in which each polypeptide chain catalyzes a single activity, located in a plastid.","definition_xrefs":["ISBN:0471331309","GOC:mah","PMID:12957385","ISBN:0716720094"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid type II fatty acid synthase complex (obsolete GO:0031378)","synonyms":[{"name":"plastid type II FAS complex","type":"exact"},{"name":"plastid type II fatty acid synthase complex","type":"exact"}],"termid":"GO:0031378"}


id: PBO:0003874
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.31","termid":"PBO:0003874"}


id: GO:0090414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of molybdate ions out of the vacuole.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdate ion transport","termid":"GO:0015689"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"molybdate ion export from vacuole","termid":"GO:0090414"}


id: GO:0032931
data:
  {"annotated_genes":["SJAG_01204"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72934],"is_not":false,"summary":null,"term":"GO:0032931"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 56) = CoA + histone H3 N6-acetyl-L-lysine (position 56).","definition_xrefs":["PMID:19056256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01204":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0034212","GO:0016740","GO:0016746","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"histone H3K56 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"histone H3-K56 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K56 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K56 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K56 specific)","type":"exact"}],"termid":"GO:0032931","terms_by_termid":{"GO:0032931":null}}


id: SO:0000285
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is foreign.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foreign_gene","synonyms":[{"name":"foreign gene","type":"exact"}],"termid":"SO:0000285"}


id: PBO:0027153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_histidine_level","termid":"PBO:0027153"}


id: MONDO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Resorption in which cementum or dentin is lost from the root of a tooth owing to cementoclastic or osteoclastic activity in conditions such as trauma of occlusion or neoplasms. (Dorland, 27th ed)","definition_xrefs":["MESH:D012391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth resorption","termid":"MONDO:0001670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"root resorption","secondary_identifiers":["DOID:14550","UMLS:C0035851","MEDGEN:11268"],"termid":"MONDO:0001997","xrefs":{"Monarch":{"xref_id":"0001997"}}}


id: GO:0051001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of the enzyme nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monooxygenase activity","termid":"GO:0032769"},{"relation_name":"is_a","term_name":"regulation of nitric-oxide synthase activity","termid":"GO:0050999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitric-oxide synthase activity","synonyms":[{"name":"NOS inhibitor","type":"narrow"},{"name":"down regulation of nitric-oxide synthase activity","type":"exact"},{"name":"down-regulation of nitric-oxide synthase activity","type":"exact"},{"name":"downregulation of nitric-oxide synthase activity","type":"exact"},{"name":"inhibition of nitric-oxide synthase activity","type":"narrow"},{"name":"negative regulation of NOS activity","type":"exact"},{"name":"nitric-oxide synthase inhibitor","type":"narrow"}],"termid":"GO:0051001"}


id: GO:0038130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the tyrosine kinase receptor ERBB4 on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:jc","PMID:16460914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ERBB4 signaling pathway","synonyms":[{"name":"ERBB4 signalling pathway","type":"exact"},{"name":"HER4 signaling pathway","type":"exact"},{"name":"receptor tyrosine-protein kinase erbB-4 signaling pathway","type":"exact"}],"termid":"GO:0038130"}


id: PBO:0026660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_upon_inositol_starvation","termid":"PBO:0026660"}


id: SO:0001112
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A peptide region which hydrogen bonded to another region of peptide running in the oposite direction (one running N-terminal to C-terminal and one running C-terminal to N-terminal). Hydrogen bonding occurs between every other C=O from one strand to every other N-H on the adjacent strand. In this case, if two atoms C-alpha (i) and C-alpha (j) are adjacent in two hydrogen-bonded beta strands, then they form two mutual backbone hydrogen bonds to each other's flanking peptide groups; this is known as a close pair of hydrogen bonds. The peptide backbone dihedral angles (phi, psi) are about (-140 degrees, 135 degrees) in antiparallel sheets.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_strand","termid":"SO:0001111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"antiparallel_beta_strand","secondary_identifiers":["BS:0000341"],"synonyms":[{"name":"antiparallel beta strand","type":"exact"}],"termid":"SO:0001112"}


id: PBO:0078266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 2-4","termid":"PBO:0078266"}


id: MONDO:0013424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 3p is a rare chromosomal anomaly syndrome, resulting from a partial deletion of the short arm of chromosome 3, with a highly variable phenotype typically characterized by pre- and post-natal growth retardation, intellectual disability, developmental delay and craniofacial dysmorphism (microcephaly, trigonocephaly, downslanting palpebral fissures, telecanthus, ptosis, micrognathia). Postaxial polydactyly, hypotonia, renal anomalies and congenital heart defects (e.g. atrioventricular septal defect) may be associated.","definition_xrefs":["Orphanet:1620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 3","termid":"MONDO:0016885"},{"relation_name":"is_a","term_name":"blepharophimosis - intellectual disability syndrome","termid":"MONDO:0017393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3p- syndrome","secondary_identifiers":["DOID:0060417","OMIM:613792","NORD:951","SCTID:763528002","MEDGEN:1643555","NCIT:C41377","MESH:C536804","UMLS:C4706503","GARD:3750"],"synonyms":[{"name":"3p deletion","type":"related"},{"name":"3p monosomy","type":"related"},{"name":"3p- syndrome","type":"exact"},{"name":"Chromosome 3, Monosomy 3p","type":"exact"},{"name":"Del(3p) syndrome","type":"related"},{"name":"chromosome 3, monosomy 3p25","type":"related"},{"name":"chromosome 3p deletion","type":"related"},{"name":"chromosome 3p- syndrome","type":"related"},{"name":"chromosome 3pter-p25 deletion syndrome","type":"exact"},{"name":"del(3p25)","type":"related"},{"name":"deletion 3p","type":"related"},{"name":"deletion 3p25","type":"related"},{"name":"distal 3p deletion","type":"exact"},{"name":"distal monosomy 3p","type":"exact"},{"name":"distal monosomy type 3p","type":"exact"},{"name":"monosomy 3p","type":"related"},{"name":"monosomy 3pter","type":"exact"},{"name":"partial monosomy 3p","type":"related"},{"name":"telomeric monosomy 3p","type":"exact"}],"termid":"MONDO:0013424","xrefs":{"Monarch":{"xref_id":"0013424"}}}


id: PBO:0000991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposable element","termid":"PBO:0000991"}


id: GO:0050688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the antiviral response of a cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to virus","termid":"GO:0051607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to virus","synonyms":[{"name":"regulation of antiviral response","type":"exact"}],"termid":"GO:0050688"}


id: GO:0052838
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052837"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving thiazole, a five-membered heterocyclic ring structure containing a sulfur in the 1-position and a nitrogen in the 3-position.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"oxazole or thiazole metabolic process","termid":"GO:0046484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"thiazole metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"thiazole metabolism","type":"exact"}],"termid":"GO:0052838","terms_by_termid":{"GO:0052837":null}}


id: MONDO:0019931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leydig cell hypoplasia, type 1","termid":"MONDO:0009384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leydig cell hypoplasia due to partial LH resistance","secondary_identifiers":["DOID:0112261","UMLS:C5438975","GARD:16852","MEDGEN:1739565","Orphanet:96266"],"synonyms":[{"name":"46,XY DSD due to partial LH receptor inactivation","type":"exact"},{"name":"46,XY DSD due to partial LH resistance","type":"exact"},{"name":"46,XY DSD due to partial luteinizing hormone resistance","type":"exact"},{"name":"46,XY disorder of sex development due to partial LH receptor inactivation","type":"exact"},{"name":"46,XY disorder of sex development due to partial LH resistance","type":"exact"},{"name":"46,XY disorder of sex development due to partial luteinizing hormone resistance","type":"exact"},{"name":"Leydig cell hypoplasia due to partial LH receptor inactivation","type":"exact"},{"name":"Leydig cell hypoplasia due to partial luteinizing hormone receptor inactivation","type":"exact"},{"name":"Leydig cell hypoplasia due to partial luteinizing hormone resistance","type":"exact"}],"termid":"MONDO:0019931","xrefs":{"Monarch":{"xref_id":"0019931"}}}


id: FYPO:0001584
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"}],"single_locus_phenotype":[{"annotations":[119790,119791,119793,119848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"},{"annotations":[119792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_01143":null,"SJAG_01794":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abnormal protein localization to cell tip during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_04280"],"single_locus_genotype_uniquenames":["pom1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell end during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell tip during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001584","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0002870":null,"FYPO:0005503":null}}


id: SO:1001274
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The incorporation of selenocysteine into a protein sequence is directed by an in-frame UGA codon (usually a stop codon) within the coding region of the mRNA. Selenoprotein mRNAs contain a conserved secondary structure in the 3' UTR that is required for the distinction of UGA stop from UGA selenocysteine. The selenocysteine insertion sequence (SECIS) is around 60 nt in length and adopts a hairpin structure which is sufficiently well-defined and conserved to act as a computational screen for selenoprotein genes.","direct_ancestors":[{"relation_name":"is_a","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SECIS_element","secondary_identifiers":["http://en.wikipedia.org/wiki/SECIS_element"],"synonyms":[{"name":"SECIS element","type":"exact"}],"termid":"SO:1001274"}


id: PBO:0086886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor, contains Forkhead Associated domain; found associated with chromatin; target of SBF transcription factor; induced in response to DNA damaging agents and deletion of telomerase; PLM2 has a paralog, TOS4, that arose from the whole genome duplication","termid":"PBO:0086886"}


id: PBO:0059795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 21","termid":"PBO:0059795"}


id: FYPO:0004635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000932"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to mitotic spindle","synonyms":[{"name":"increased protein localisation to mitotic spindle","type":"exact"},{"name":"increased protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"increased protein localization to spindle during mitosis","type":"exact"},{"name":"increased protein localization to spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0004635"}


id: PBO:0088539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, inorganic phosphate/copper","termid":"PBO:0088539"}


id: GO:0160058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a plant endodermal cell.","definition_xrefs":["PMID:21735349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant endodermal cell differentiation","termid":"GO:0160058"}


id: GO:0070244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of thymocyte death by apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of thymocyte apoptotic process","termid":"GO:0070243"},{"relation_name":"negatively_regulates","term_name":"thymocyte apoptotic process","termid":"GO:0070242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thymocyte apoptotic process","synonyms":[{"name":"down regulation of thymocyte apoptosis","type":"exact"},{"name":"down-regulation of thymocyte apoptosis","type":"exact"},{"name":"downregulation of thymocyte apoptosis","type":"exact"},{"name":"inhibition of thymocyte apoptosis","type":"narrow"},{"name":"negative regulation of immature T cell apoptosis","type":"related"},{"name":"negative regulation of thymocyte apoptosis","type":"narrow"}],"termid":"GO:0070244"}


id: MONDO:0975830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy with myalgia, increased serum creatine kinase, and with or without episodic rhabdomyolysis 2","secondary_identifiers":["OMIM:620971"],"termid":"MONDO:0975830","xrefs":{"Monarch":{"xref_id":"0975830"}}}


id: PBO:0052160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 8","termid":"PBO:0052160"}


id: PBO:0076167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1A member 3","termid":"PBO:0076167"}


id: PBO:0017866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug168","termid":"PBO:0017866"}


id: GO:0031109
data:
  {"annotated_genes":["SJAG_02336","SJAG_02609","SJAG_02045","SJAG_01756","SJAG_02761","SJAG_00723","SJAG_01224","SJAG_04312","SJAG_03540","SJAG_03835","SJAG_04841","SJAG_01215","SJAG_00856","SJAG_02624","SJAG_02737","SJAG_07018","SJAG_02886","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[117241],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030954"},{"annotations":[98945,118451,89961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007019"},{"annotations":[79387,71500,72084],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[100406,117491,106764,117246,101305,100702],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[101306,118964],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"},{"annotations":[79819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046785"},{"annotations":[104217,108575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[102166],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031117"},{"annotations":[70973],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031110"}]},"cv_name":"biological_process","definition":"Assembly or disassembly of microtubules by the addition or removal of tubulin heterodimers from a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00723":null,"SJAG_00856":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01756":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04312":null,"SJAG_04841":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"microtubule polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"microtubule dynamics","type":"exact"}],"termid":"GO:0031109","terms_by_termid":{"GO:0007019":null,"GO:0007020":null,"GO:0030954":null,"GO:0031110":null,"GO:0031117":null,"GO:0046785":null,"GO:0051415":null,"GO:0051417":null,"GO:0060172":null,"GO:0070462":null}}


id: MONDO:0100513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Mendelian disease in which the cause of the disease is a mutation in the TRAF3 gene. TRAF3 haploinsufficiency caused by heterozygous loss of function (null) variants presents as an immune dysregulation syndrome of recurrent bacterial infections, autoimmunity, systemic inflammation, B cell lymphoproliferation, and hypergammaglobulinemia.","definition_xrefs":["PMID:35960817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3 haploinsufficiency","termid":"MONDO:0100513","xrefs":{"Monarch":{"xref_id":"0100513"}}}


id: PBO:0062037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 6","termid":"PBO:0062037"}


id: GO:1903332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein folding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"protein folding","termid":"GO:0006457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006457"],"is_obsolete":false,"name":"regulation of protein folding","synonyms":[{"name":"regulation of alpha-tubulin folding","type":"narrow"},{"name":"regulation of beta-tubulin folding","type":"narrow"},{"name":"regulation of chaperone activity","type":"related"},{"name":"regulation of chaperonin ATPase activity","type":"related"},{"name":"regulation of chaperonin-mediated tubulin folding","type":"narrow"},{"name":"regulation of co-chaperone activity","type":"related"},{"name":"regulation of co-chaperonin activity","type":"related"},{"name":"regulation of glycoprotein-specific chaperone activity","type":"related"},{"name":"regulation of non-chaperonin molecular chaperone ATPase activity","type":"related"},{"name":"regulation of protein complex assembly, multichaperone pathway","type":"related"}],"termid":"GO:1903332"}


id: PR:O74473
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc11 gene.","definition_xrefs":["UniProtKB:O74473","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation initiation network scaffold protein cdc11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.11c","synonyms":[{"name":"SIN scaffold protein cdc11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cdc11","type":"exact"},{"name":"cell division control protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74473"}


id: _global:gene_product_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"definition \\\"x has gene product of y if and only if y is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from x\\\"","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"_global:genomically_related_to"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_product_of","secondary_identifiers":["GOREL:0001028","RO:0002204"],"termid":"_global:gene_product_of"}


id: PBO:0005529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ATXN10 ortholog, implicated in amino acid biosynthesis","termid":"PBO:0005529"}


id: PR:O74780
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC25B2.08 gene.","definition_xrefs":["UniProtKB:O74780","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C25B2.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.08","synonyms":[{"name":"Spom972h-SPBC25B2.08","type":"exact"}],"termid":"PR:O74780"}


id: PBO:0048508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 9","termid":"PBO:0048508"}


id: GO:0019564
data:
  {"annotated_genes":["SJAG_04048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88947],"is_not":false,"summary":null,"term":"GO:0019564"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycerol, 1,2,3-propanetriol, in the presence of oxygen.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol catabolic process","termid":"GO:0019563"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aerobic glycerol catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019565","MetaCyc:PWY0-381"],"synonyms":[{"name":"aerobic glycerol breakdown","type":"exact"},{"name":"aerobic glycerol catabolism","type":"exact"},{"name":"aerobic glycerol degradation","type":"exact"},{"name":"aerobic glycerol fermentation","type":"related"}],"termid":"GO:0019564","terms_by_termid":{"GO:0019564":null}}


id: PR:O14043
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2C4.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.10c","synonyms":[{"name":"Spom972h-csc4","type":"exact"}],"termid":"PR:O14043"}


id: GO:0060118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a vestibular receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell development","termid":"GO:0060119"},{"relation_name":"part_of","term_name":"vestibular receptor cell differentiation","termid":"GO:0060114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular receptor cell development","synonyms":[{"name":"vestibular hair cell development","type":"exact"}],"termid":"GO:0060118"}


id: FYPO:0005671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is higher than normal in a population that is exposed to methyl methanesulfonate. The septation index is the proportion of the population undergoing septation at any given time.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased septation index","termid":"FYPO:0000650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased septation index during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased septation index during cellular response to MMS","type":"exact"},{"name":"increased septation index in response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005671"}


id: PBO:0055583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3019","termid":"PBO:0055583"}


id: PBO:0075582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 6","termid":"PBO:0075582"}


id: GO:0048561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of an animal organ or tissue with reference to an axis.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of anatomical structure orientation","termid":"GO:0048560"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of animal organ orientation","termid":"GO:0048561"}


id: FYPO:0007194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more mitochondria than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"mitochondria present in increased numbers","synonyms":[{"name":"extra mitochondria during vegetative growth","type":"exact"},{"name":"increased number of mitochondria during vegetative growth","type":"exact"},{"name":"mitochondria present in increased numbers during mitotic cell cycle","type":"related"},{"name":"mitochondria present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0007194"}


id: GO:0016072
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id: PBO:0060401
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id: GO:0018477
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id: GO:0016964
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id: PBO:0065458
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id: GO:0018974
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id: MONDO:0023167
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id: PBO:0045618
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id: PBO:0059491
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id: GO:1900753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a doxorubicin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:19651502","PMID:12057006","PMID:15090538","PMID:19063901","PMID:9651400","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"doxorubicin transport","synonyms":[{"name":"(1S,3S)-3,5,12-trihydroxy-3-(hydroxyacetyl)-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside transport","type":"exact"},{"name":"(1S,3S)-3-glycoloyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside transport","type":"related"},{"name":"(8S-cis)-10-((3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranosyl)oxy)-7,8,9,10-tetrahydro-6,8,11-trihydroxy-8-(hydroxyacetyl)-1-methoxy-5,12-naphthacenedione transport","type":"related"},{"name":"14-hydroxydaunomycin transport","type":"related"},{"name":"14-hydroxydaunorubicine transport","type":"related"},{"name":"Adriamycin transport","type":"related"},{"name":"doxorubicine transport","type":"related"},{"name":"doxorubicinum transport","type":"related"}],"termid":"GO:1900753"}


id: SO:0000403
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U14 small nucleolar RNA (U14 snoRNA) is required for early cleavages of eukaryotic precursor rRNAs. In yeasts, this molecule possess a stem-loop region (known as the Y-domain) which is essential for function. A similar structure, but with a different consensus sequence, is found in plants, but is absent in vertebrates.","definition_xrefs":["PMID:2551119"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"U14_snoRNA_primary_transcript","termid":"SO:0005837"},{"relation_name":"is_a","term_name":"C_D_box_snoRNA","termid":"SO:0000593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U14_snoRNA","secondary_identifiers":["SO:0005839"],"synonyms":[{"name":"snoRNA U14","type":"exact"},{"name":"U14 small nucleolar RNA","type":"exact"},{"name":"U14 snoRNA","type":"exact"},{"name":"small nucleolar RNA U14","type":"exact"}],"termid":"SO:0000403"}


id: PBO:0068685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 66, pseudogene","termid":"PBO:0068685"}


id: GO:0099101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A potassium channel activity that is gated by binding of a G-protein beta-gamma dimer.","definition_xrefs":["PMID:9429760","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"G-protein gated potassium channel activity","termid":"GO:0099101"}


id: MONDO:0000133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The Immunodeficiency, Centromeric region instability, Facial anomalies syndrome (ICF) is a rare autosomal recessive disease characterized by immunodeficiency, although B cells are present, and by characteristic rearrangements in the vicinity of the centromeres (the juxtacentromeric heterochromatin) of chromosomes 1 and 16 and sometimes 9.","definition_xrefs":["Orphanet:2268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019303"],"is_obsolete":false,"name":"immunodeficiency-centromeric instability-facial anomalies syndrome","secondary_identifiers":["DOID:0090007","OMIMPS:242860","UMLS:C0398788","MESH:C537362","NANDO:1200334","GARD:2945","MEDGEN:140770","NANDO:2200708","SCTID:234633000"],"synonyms":[{"name":"CIID","type":"related"},{"name":"ICF syndrome","type":"related"},{"name":"immunodeficiency-centromeric instability-facial anomalies","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome","type":"exact"}],"termid":"MONDO:0000133","xrefs":{"Monarch":{"xref_id":"0000133"}}}


id: PBO:0082639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glutamine amidotransferase (GATase II); forms a complex with Dug3p to degrade glutathione (GSH) and other peptides containing a gamma-glu-X bond in an alternative pathway to GSH degradation by gamma-glutamyl transpeptidase (Ecm38p)","termid":"PBO:0082639"}


id: PBO:0053900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1189","termid":"PBO:0053900"}


id: PBO:0054599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2003","termid":"PBO:0054599"}


id: GO:1990757
data:
  {"annotated_genes":["SJAG_00071","SJAG_04853","SJAG_03809","SJAG_00666","SJAG_03858"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76903,79442,79462,80312,80684],"is_not":false,"summary":null,"term":"GO:1990757"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a ubiquitin ligase.","definition_xrefs":["GOC:dph","PMID:25619242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-protein transferase activator activity","termid":"GO:0097027"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00666":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"positively_regulates","termid":"GO:0140096"},{"rel_name":"regulates","termid":"GO:0140096"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"regulates","termid":"GO:0016746"},{"rel_name":"positively_regulates","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"regulates","termid":"GO:0019787"},{"rel_name":"positively_regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0016740"},{"rel_name":"positively_regulates","termid":"GO:0016740"},{"rel_name":"positively_regulates","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0016746","GO:0140677","GO:0019787","GO:0003824","GO:0016740","GO:0003674","GO:0140096","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"ubiquitin ligase activator activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0061636"],"synonyms":[{"name":"mitotic anaphase-promoting complex activator activity","type":"narrow"}],"termid":"GO:1990757","terms_by_termid":{"GO:1990757":null}}


id: PBO:0028692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_doxorubicin","termid":"PBO:0028692"}


id: GO:0004946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with bombesin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"bombesin receptor activity","termid":"GO:0004946"}


id: GO:0102431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a (5Z,9Z,12Z)-octadecatrienoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O. Can also use a substrate with 3 double bonds (a (9Z,12Z,15Z)-octadecatrienoyl-containing glycerolipid) and add a fourth double bond (a (5Z,9Z,12Z,15Z)-octadecatetraenoyl-containing glycerolipid).","definition_xrefs":["EC:1.14.19.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"acyl-lipid omega-(9-4) desaturase activity","secondary_identifiers":["GO:0102430"],"synonyms":[{"name":"acyl-lipid omega-(9-4) desaturase","type":"exact"},{"name":"alpha-linolenate delta5 desaturase activity","type":"narrow"},{"name":"linoleate delta5 desaturase activity","type":"related"}],"termid":"GO:0102431"}


id: PBO:0053959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1266","termid":"PBO:0053959"}


id: MOD:00463
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 3'-hydroxy-L-kynurenine.","definition_xrefs":["OMSSA:58","PubMed:9252331","Unimod:350#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-hydroxy-L-kynurenine","synonyms":[{"name":"Trp->Hydroxykynurenin","type":"related"},{"name":"hydroxykynureninw","type":"exact"},{"name":"tryptophan oxidation to hydroxykynurenin","type":"related"}],"termid":"MOD:00463"}


id: GO:0061109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a dense core granule. A dense core granule is a secretory organelle found in endocrine cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dense core granule organization","synonyms":[{"name":"dense core granule organisation","type":"exact"}],"termid":"GO:0061109"}


id: PBO:0043781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C3 and PZP like alpha-2-macroglobulin domain containing 8","termid":"PBO:0043781"}


id: GO:0043048
data:
  {"annotated_genes":["SJAG_04231"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80645],"is_not":false,"summary":null,"term":"GO:0043048"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichyl diphosphate, a phosphorylated dolichol derivative.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"dolichyl monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"dolichyl monophosphate anabolism","type":"exact"},{"name":"dolichyl monophosphate biosynthesis","type":"exact"},{"name":"dolichyl monophosphate formation","type":"exact"},{"name":"dolichyl monophosphate synthesis","type":"exact"}],"termid":"GO:0043048","terms_by_termid":{"GO:0043048":null}}


id: PBO:0042293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD3 gamma subunit of T-cell receptor complex","termid":"PBO:0042293"}


id: MONDO:0005346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Solid crystalline precipitates in the biliary tract, usually formed in the gallbladder, resulting in the condition of cholelithiasis. Gallstones, derived from the bile, consist mainly of calcium, cholesterol, or bilirubin.","definition_xrefs":["MESH:D042882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder disorder","termid":"MONDO:0005281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"gallstones","secondary_identifiers":["ICD9:574.20","EFO:0004210","MEDGEN:66850","SCTID:235919008","UMLS:C0242216"],"termid":"MONDO:0005346","xrefs":{"Monarch":{"xref_id":"0005346"}}}


id: PBO:0003190
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.42","termid":"PBO:0003190"}


id: PBO:0048637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 6, pseudogene","termid":"PBO:0048637"}


id: PBO:0084786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial porin (voltage-dependent anion channel); outer membrane protein required for maintenance of mitochondrial osmotic stability and mitochondrial membrane permeability; couples the glutathione pools of the intermembrane space (IMS) and the cytosol; interacts with Om45 and Om14 in the outer membrane; phosphorylated; protein abundance increases in response to DNA replication stress","termid":"PBO:0084786"}


id: PBO:0017756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic phenylalanine-tRNA ligase beta subunit Frs1 (predicted)","termid":"PBO:0017756"}


id: PBO:0085462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted protein kinase; negatively regulates the hexosamine biosynthetic pathway (HBP), which converts fructose-6-phosphate into UDP-N-acetylglucosamine, a precursor of chitin biosynthesis, GPI-anchor formation and glycosylation; interacts genetically with GFA1, encoding the first enzyme in the HBP; involved in Gfa1p phosphorylation (S332, T334); contains a Pho85p-regulated SCF-CDC4 phosphodegron; unstable, cell cycle regulated protein, peaking at G1/S","termid":"PBO:0085462"}


id: GO:0007300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Transfer of constituents synthesized in the ovarian nurse cells to the oocyte, through the ring canals, as the egg chamber is growing. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"ovarian nurse cell to oocyte transport","synonyms":[{"name":"nurse cell to oocyte transport","type":"broad"}],"termid":"GO:0007300"}


id: MONDO:0002997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the anterior cranial fossa.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior cranial fossa meningioma","secondary_identifiers":["DOID:4436","MEDGEN:272315","NCIT:C5286","UMLS:C1332301"],"synonyms":[{"name":"anterior cranial fossa meningioma (disease)","type":"exact"},{"name":"anterior fossa meningioma","type":"exact"},{"name":"meningioma (disease) of anterior cranial fossa","type":"exact"},{"name":"meningioma of anterior cranial fossa","type":"exact"},{"name":"meningioma of anterior fossa","type":"exact"},{"name":"meningioma of the anterior cranial fossa","type":"exact"},{"name":"meningioma of the anterior fossa","type":"exact"}],"termid":"MONDO:0002997","xrefs":{"Monarch":{"xref_id":"0002997"}}}


id: PBO:0047434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 5","termid":"PBO:0047434"}


id: FYPO:0004807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which the cell is narrower than normal at the point where cell fusion occurred during mating. Normally, the cell expands at the fusion site after fusion takes place.","definition_xrefs":["PomBase:mah","PMID:25825517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"narrow cell fusion site following mating","synonyms":[{"name":"narrow cell fusion site following conjugation","type":"exact"},{"name":"narrow cell fusion site following conjugation with cellular fusion","type":"exact"},{"name":"narrow cell-cell fusion site following conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0004807"}


id: MONDO:0005797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Involuntary weight loss of greater than 10 percent associated with intermittent or constant fever and chronic diarrhea or fatigue for more than 30 days in the absence of a defined cause other than hiv infection. A constant feature is major muscle wasting with scattered myofiber degeneration. A variety of etiologies, which vary among patients, contributes to this syndrome. (From Harrison's Principles of Internal Medicine, 13th ed, p1611).","definition_xrefs":["MESH:D019247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"HIV infectious disease","termid":"MONDO:0005109"},{"relation_name":"is_a","term_name":"AIDS-related disorder","termid":"MONDO:0024571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"HIV wasting syndrome","secondary_identifiers":["GARD:19122","MEDGEN:87476","UMLS:C0343755","EFO:0007312","Orphanet:90081"],"termid":"MONDO:0005797","xrefs":{"Monarch":{"xref_id":"0005797"}}}


id: MONDO:0010412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-craniofacioskeletal syndrome is a rare, hereditary, syndromic intellectual disability characterized by craniofacial and skeletal abnormalities in association with mild intellectual disability in females and early postnatal lethality in males. In addition to mild cognitive impairment, females present with microcephaly, short stature, skeletal features and extra temporal lobe gyrus. In males, intrauterine growth impairment, cardiac and urogenital anomalies have been reported.","definition_xrefs":["Orphanet:163979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability-craniofacioskeletal syndrome","secondary_identifiers":["UMLS:C2678036","GARD:17009","MEDGEN:394716","MESH:C567471","OMIM:300712"],"synonyms":[{"name":"craniofacioskeletal syndrome","type":"related"},{"name":"craniofacioskeletal syndrome, X-linked recessive, X-linked dominant","type":"exact"}],"termid":"MONDO:0010412","xrefs":{"Monarch":{"xref_id":"0010412"}}}


id: PBO:0072430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 4","termid":"PBO:0072430"}


id: PBO:0036519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein phosphatase involved in unfolded protein response Dcr2 (predicted)","termid":"PBO:0036519"}


id: PR:O59734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small nuclear ribonucleoprotein F that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03376","PANTHER:PTHR11021:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein F (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.14","secondary_identifiers":["UniProtKB:O59734"],"synonyms":[{"name":"Sm protein F (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Sm-F (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SmF (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SNRPF","type":"exact"},{"name":"snRNP-F (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59734"}


id: PBO:0072022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 9","termid":"PBO:0072022"}


id: GO:0006449
data:
  {"annotated_genes":["SJAG_05265","SJAG_02812","SJAG_00642","SJAG_02189"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74429],"is_not":false,"summary":null,"term":"GO:0006449"},{"annotations":[66593,68832,76834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translational termination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"translational termination","termid":"GO:0006415"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00642":null,"SJAG_02189":null,"SJAG_02812":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational termination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null},"termid":"GO:0006449","terms_by_termid":{"GO:0006449":null,"GO:0045905":null}}


id: PBO:0063675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 4","termid":"PBO:0063675"}


id: PBO:0063044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PALLD antisense RNA 1","termid":"PBO:0063044"}


id: PBO:0063652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 9","termid":"PBO:0063652"}


id: GO:0030739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + O-demethylpuromycin = S-adenosyl-L-homocysteine + puromycin.","definition_xrefs":["EC:2.1.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"O-demethylpuromycin O-methyltransferase activity","secondary_identifiers":["RHEA:22280","MetaCyc:2.1.1.38-RXN"],"synonyms":[{"name":"O-demethylpuromycin methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:O-demethylpuromycin O-methyltransferase activity","type":"related"}],"termid":"GO:0030739"}


id: MONDO:0004849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subcategory of chronic obstructive pulmonary disease (COPD). It occurs in people who smoke and suffer from chronic bronchitis. It is characterized by inflation of the alveoli, alveolar wall damage, and reduction in the number of alveoli, resulting in difficulty breathing.","definition_xrefs":["NCIT:C3348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic obstructive pulmonary disease","termid":"MONDO:0005002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary emphysema","secondary_identifiers":["ICD10CM:J43","EFO:0000464","MEDGEN:18764","MESH:D004646","UMLS:C0034067","SCTID:87433001","ICD9:492","DOID:9675","ICD9:492.8","MESH:D011656"],"synonyms":[{"name":"emphysema","type":"exact"},{"name":"emphysema, pulmonary","type":"exact"}],"termid":"MONDO:0004849","xrefs":{"Monarch":{"xref_id":"0004849"}}}


id: MONDO:0017514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"split foot","termid":"MONDO:0017450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split foot, bilateral","secondary_identifiers":["ICD10CM:Q72.73","icd11.foundation:1227623929","MEDGEN:1757565","Orphanet:295126","UMLS:C2910315"],"termid":"MONDO:0017514","xrefs":{"Monarch":{"xref_id":"0017514"}}}


id: PBO:0086471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; conserved in fungi; identified by expression profiling and mass spectrometry","termid":"PBO:0086471"}


id: PBO:0036549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit, ubiquitin-protein ligase E3 Pep3/Vps18 (predicted)","termid":"PBO:0036549"}


id: PBO:0077136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIR domain containing adaptor protein","termid":"PBO:0077136"}


id: PR:Q9UUI5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein transport protein Sec24A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.08","secondary_identifiers":["UniProtKB:Q9UUI5"],"synonyms":[{"name":"Spom972h-SEC24A","type":"exact"}],"termid":"PR:Q9UUI5"}


id: PBO:0046476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 1, endonuclease non-catalytic subunit","termid":"PBO:0046476"}


id: MONDO:0001676
data:
  {"annotated_genes":["SJAG_03961","SJAG_01841"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"},{"annotations":[87072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010420"}]},"cv_name":"mondo","definition":"A rare congenital metabolic disorder characterized by an inborn error of porphyrin-heme biosynthesis. Signs and symptoms include painful cutaneous photosensitivity leading to blistering and scarring of the exposed skin areas, erythrodontia, red discoloration of urine, hemolytic anemia, and splenomegaly.","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic porphyria","termid":"MONDO:0002520"},{"relation_name":"is_a","term_name":"inherited porphyria","termid":"MONDO:0019142"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01841":null,"SJAG_03961":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0004335","MONDO:0002515","MONDO:0019142"],"is_obsolete":false,"name":"erythropoietic protoporphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0162568","MEDGEN:56455","NANDO:2201266","SCTID:51022005","MESH:D046351","icd11.foundation:1642941362","OMIMPS:177000","Orphanet:659681","NANDO:1200815","DOID:13270"],"synonyms":[{"name":"EPP (erythropoietic protoporphyria porphyria)","type":"exact"},{"name":"protoporphyria","type":"exact"}],"termid":"MONDO:0001676","terms_by_termid":{"MONDO:0008319":null,"MONDO:0010420":null},"xrefs":{"Monarch":{"xref_id":"0001676"}}}


id: PBO:0028973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_during_mitosis","termid":"PBO:0028973"}


id: PR:Q9UTC9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00201","PANTHER:PTHR13303:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.10","secondary_identifiers":["UniProtKB:Q9UTC9"],"synonyms":[{"name":"Spom972h-PFDN2","type":"exact"}],"termid":"PR:Q9UTC9"}


id: GO:1900801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cspyrone B1.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"cspyrone B1 metabolic process","termid":"GO:1900800"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"cspyrone B1 catabolic process","synonyms":[{"name":"cspyrone B1 breakdown","type":"exact"},{"name":"cspyrone B1 catabolism","type":"exact"},{"name":"cspyrone B1 degradation","type":"exact"}],"termid":"GO:1900801"}


id: PBO:0039004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALF transcription elongation factor 1","termid":"PBO:0039004"}


id: PBO:0090051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S12","termid":"PBO:0090051"}


id: GO:0042344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of indole glucosinolates, sulfur-containing compounds that have a common structure linked to an R group derived from tryptophan.","definition_xrefs":["PMID:29122987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosinolate catabolic process","termid":"GO:0019762"},{"relation_name":"is_a","term_name":"indole glucosinolate metabolic process","termid":"GO:0042343"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"indole glucosinolate catabolic process","synonyms":[{"name":"indole glucosinolate breakdown","type":"exact"},{"name":"indole glucosinolate catabolism","type":"exact"},{"name":"indole glucosinolate degradation","type":"exact"}],"termid":"GO:0042344"}


id: PBO:0074609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 14A","termid":"PBO:0074609"}


id: PBO:0002240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Caj1/Djp1 type (predicted)","termid":"PBO:0002240"}


id: MONDO:0000449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Opitz-GBBB syndrome (obsolete MONDO:0000449)","termid":"MONDO:0000449","xrefs":{"Monarch":{"xref_id":"0000449"}}}


id: FYPO:0005506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more mitochondrial transport mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Mitochondrial transport mRNAs are transcribed from genes whose products are involved in transport to or from the mitochondrion.","definition_xrefs":["PomBase:mah","PMID:23236291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased level of mitochondrial transport gene mRNA during vegetative growth","synonyms":[{"name":"increased level of mitochondrial transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of mitochondrial transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of mitochondrial transport gene transcripts during vegetative growth","type":"exact"},{"name":"increased mitochondrial transport gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0005506"}


id: PBO:0072796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 2","termid":"PBO:0072796"}


id: PBO:0080634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 82 pseudogene 2","termid":"PBO:0080634"}


id: MONDO:0020546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome of immunologically mediated tissue damage that may occur following an allogeneic transplant, usually affecting the skin, liver, and GI tract. The onset is usually within one hundred days of transplantation or immunologic manipulation.","definition_xrefs":["NCIT:C4980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"graft versus host disease","termid":"MONDO:0013730"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute graft versus host disease","secondary_identifiers":["SCTID:402355000","UMLS:C0856825","icd11.foundation:83784921","ICD9:279.51","Orphanet:99920","MEDGEN:208987","MedDRA:10066260","GARD:6544","ICD10CM:D89.810"],"synonyms":[{"name":"GVHD, acute","type":"exact"},{"name":"acute GVHD","type":"related"},{"name":"acute graft vs. host disease","type":"exact"},{"name":"fulminant graft versus host disease","type":"exact"},{"name":"graft versus host disease, acute","type":"exact"}],"termid":"MONDO:0020546","xrefs":{"Monarch":{"xref_id":"0020546"}}}


id: MONDO:0029000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition or physical state produced by the ingestion, injection, inhalation of or exposure to a deleterious agent.","definition_xrefs":["MESH:D011041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poisoning","secondary_identifiers":["EFO:0008546","SCTID:75478009"],"synonyms":[{"name":"Poisonings","type":"related"},{"name":"intoxication","type":"related"},{"name":"poisoning syndrome","type":"related"}],"termid":"MONDO:0029000","xrefs":{"Monarch":{"xref_id":"0029000"}}}


id: PBO:0048119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUS RNA binding protein","termid":"PBO:0048119"}


id: PBO:0049021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 3","termid":"PBO:0049021"}


id: FYPO:0006313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which progression from meiotic G2 phase to M phase of meiosis I does not occur.","definition_xrefs":["PMID:29259000","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle phase transition","termid":"FYPO:0005274"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished meiotic G2/MI transition","synonyms":[{"name":"abolished G2/MI transition of meiotic cell cycle","type":"exact"},{"name":"abolished entry into meiosis","type":"related"}],"termid":"FYPO:0006313"}


id: MONDO:0035648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic dystrophy","termid":"MONDO:0016107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"juvenile-onset Steinert myotonic dystrophy","secondary_identifiers":["ICD10CM:G71.1","Orphanet:589827","UMLS:C5680306","GARD:22363","MEDGEN:1843227"],"synonyms":[{"name":"Juvenile-onset Steinert disease","type":"exact"},{"name":"Juvenile-onset myotonic dystrophy type 1","type":"exact"}],"termid":"MONDO:0035648","xrefs":{"Monarch":{"xref_id":"0035648"}}}


id: MONDO:0007217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A3","secondary_identifiers":["DOID:0110966","UMLS:C1862140","Orphanet:93393","GARD:963","icd11.foundation:153446585","MESH:C537090","MEDGEN:354670","OMIM:112700"],"synonyms":[{"name":"BDA3","type":"exact"},{"name":"Brachymesophalangy 5","type":"related"},{"name":"brachydactyly, type A3","type":"related"},{"name":"brachydactyly-clinodactyly","type":"exact"},{"name":"brachymesophalangy V","type":"exact"}],"termid":"MONDO:0007217","xrefs":{"Monarch":{"xref_id":"0007217"}}}


id: PBO:0048214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit rho1","termid":"PBO:0048214"}


id: GO:0031400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein modification process","synonyms":[{"name":"down regulation of protein modification","type":"exact"},{"name":"down-regulation of protein modification","type":"exact"},{"name":"downregulation of protein modification","type":"exact"},{"name":"inhibition of protein modification","type":"narrow"}],"termid":"GO:0031400"}


id: MONDO:0002010
data:
  {"annotated_genes":["SJAG_00156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010590"}]},"cv_name":"mondo","definition":"FG syndrome (FGS) is a genetic condition that affects many parts of the body and occurs almost exclusively in males. 'FG' represents the surname initials of the firstindividuals diagnosed with the disorder.People withFG syndrome frequently have intellectual disability ranging from mild to severe, hypotonia, constipation and/or anal anomalies, a distinctive facial appearance, broad thumbs and great toes,alarge head compared to body size (relative macrocephaly), and abnormalities of the corpus callosum. Medical problems including heart defects, seizures, undescended testicle, and an inguinal hernia have also been reported in some affected individuals. Researchers have identified five regions of the X chromosome that are linked to FG syndrome in affected families. Mutations in the MED12 gene appears to be the most common cause of this disorder, leading to FG syndrome 1. Other genes involved with FG syndrome include FLNA (FGS2), CASK (FGS4), UPF3B (FGS6), and BRWD3 (FGS7).FGS is inherited in an X-linked recessive pattern.Individualized early intervention and educational services are important so that each child can reach their fullest potential.","definition_xrefs":["GARD:0002317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00156":null},"genotype_count":0,"is_obsolete":false,"name":"FG syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:305450","SCTID:49984004","Orphanet:323","EFO:0009297","DOID:14711","UMLS:C0220769","ICD9:759.89","icd11.foundation:156523187","MEDGEN:113106"],"synonyms":[{"name":"FGS","type":"related"},{"name":"FGS1","type":"narrow"},{"name":"Keller syndrome","type":"exact"},{"name":"Opitz-Kaveggia syndrome","type":"narrow"},{"name":"intellectual disability, large head, imperforate anus, congenital hypotonia, and partial agenesis of corpus callosum","type":"related"},{"name":"mental retardation, large head, imperforate anus, congenital hypotonia, and partial agenesis of corpus callosum","type":"related"}],"termid":"MONDO:0002010","terms_by_termid":{"MONDO:0010590":null},"xrefs":{"Monarch":{"xref_id":"0002010"}}}


id: FYPO:0000807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which kinetochore organization is abnormal. Kinetochore organization results in the assembly, arrangement of constituent parts, or disassembly of the kinetochore, the chromosomal attachment point for the spindle microtubules.","definition_xrefs":["GO:0051383","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal kinetochore organization","synonyms":[{"name":"abnormal kinetochore organisation","type":"exact"},{"name":"abnormal kinetochore organization during mitotic cell cycle","type":"related"},{"name":"abnormal kinetochore organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000807"}


id: FYPO:0002472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of histone H2A does not occur during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during cellular response to ionizing radiation","termid":"FYPO:0002471"},{"relation_name":"is_a","term_name":"abolished histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abolished histone H2A phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"abolished H2A phosphorylation during cellular response to IR","type":"exact"},{"name":"abolished histone H2A phosphorylation during cellular response to IR","type":"exact"},{"name":"abolished histone H2A phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"abolished histone H2A phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"histone H2A phosphorylation abolished during cellular response to IR","type":"exact"},{"name":"histone H2A phosphorylation abolished during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0002472"}


id: PBO:0000821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-P subunit (predicted)","termid":"PBO:0000821"}


id: GO:0034218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving ascospore wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of ascospores.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ascospore wall chitin metabolic process (obsolete GO:0034218)","synonyms":[{"name":"ascospore wall chitin metabolism","type":"exact"}],"termid":"GO:0034218"}


id: GO:1990682
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of a macrophage colony-stimulating factor (CSF1, also called M-CSF) dimer bound to a dimerized receptor (CSF1R, also called FMS). Receptor dimerization requires the presence of the ligand.","definition_xrefs":["GOC:bf","GOC:nc","GOC:BHF","PMID:19017797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CSF1-CSF1R complex","synonyms":[{"name":"CSF1:C-FMS complex","type":"exact"},{"name":"M-CSF:C-FMS complex","type":"related"},{"name":"M-CSF:CSF1R complex","type":"related"},{"name":"M-CSF:FMS complex","type":"exact"},{"name":"macrophage colony-stimulating factor:receptor complex","type":"exact"}],"termid":"GO:1990682"}


id: GO:0120543
data:
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id: MONDO:0010568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aicardi syndrome is a rare neurodevelopmental disorder defined by the triad of agenesis of the corpus callosum (total or partial), typical chorioretinal lacunae and infantile spasms that affect almost exclusively females.","definition_xrefs":["Orphanet:50"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic developmental defect of the eye (obsolete MONDO:0015218)","termid":"MONDO:0015218"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Aicardi syndrome","secondary_identifiers":["MESH:D058540","NCIT:C35256","GARD:5764","MEDGEN:61236","NANDO:1200562","icd11.foundation:2057245946","OMIM:304050","NORD:745","MedDRA:10054935","SCTID:80651009","UMLS:C0175713","DOID:8461"],"synonyms":[{"name":"AIC","type":"exact"},{"name":"Aicardi syndrome","type":"exact"},{"name":"Aicardi syndrome, X-linked dominant","type":"exact"},{"name":"Aicardi’s syndrome","type":"exact"},{"name":"agenesis of corpus callosum with chorioretinal abnormality","type":"exact"},{"name":"corpus callosum agenesis of with chorioretinal abnormality","type":"exact"},{"name":"corpus callosum, agenesis of, with chorioretinal abnormality","type":"exact"}],"termid":"MONDO:0010568","xrefs":{"Monarch":{"xref_id":"0010568"}}}


id: PBO:0055812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylglycerol acyltransferase 1 pseudogene 1","termid":"PBO:0055812"}


id: MONDO:0030674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Teebi hypertelorism syndrome","termid":"MONDO:0030639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Teebi hypertelorism syndrome 2","secondary_identifiers":["MEDGEN:1809276","DOID:0081074","OMIM:619736","UMLS:C5676911"],"synonyms":[{"name":"TBHS2","type":"exact"},{"name":"Teebi hypertelorism syndrome 2","type":"exact"}],"termid":"MONDO:0030674","xrefs":{"Monarch":{"xref_id":"0030674"}}}


id: PBO:0057908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3611","termid":"PBO:0057908"}


id: PBO:0038609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 5","termid":"PBO:0038609"}


id: GO:0002042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels involved in sprouting angiogenesis.","definition_xrefs":["PMID:16391003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"},{"relation_name":"part_of","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in sprouting angiogenesis","termid":"GO:0002042"}


id: PBO:0031813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_autophagy","termid":"PBO:0031813"}


id: GO:0010536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency or rate of activation of JAK (Janus Activated Kinase) protein. The activation of JAK protein is the process of introducing a phosphate group to a tyrosine residue of a JAK (Janus Activated Kinase) protein, thereby activating it.","definition_xrefs":["PMID:9135582","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of activation of Janus kinase activity (obsolete GO:0010536)","synonyms":[{"name":"positive regulation of activation of JAK protein","type":"exact"},{"name":"positive regulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"positive regulation of activation of JAK1 protein","type":"narrow"},{"name":"positive regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"positive regulation of activation of JAK2 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of JAK protein","type":"related"},{"name":"positive regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of JAK2 protein","type":"narrow"}],"termid":"GO:0010536"}


id: MONDO:0013938
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  {"annotated_genes":["SJAG_05950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87578],"is_not":false,"summary":null,"term":"MONDO:0013938"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX26 defect","termid":"MONDO:0100271"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0006025","MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 7A (Zellweger)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:854881","DOID:0080482","UMLS:C3888385","OMIM:614872","GARD:15866"],"synonyms":[{"name":"PBD7A","type":"related"},{"name":"peroxisome biogenesis disorder 7A (Zellweger)","type":"exact"},{"name":"peroxisome biogenesis disorder, complementation group 8","type":"related"},{"name":"peroxisome biogenesis disorder, complementation group A","type":"related"}],"termid":"MONDO:0013938","terms_by_termid":{"MONDO:0013938":null},"xrefs":{"Monarch":{"xref_id":"0013938"}}}


id: MONDO:0013798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 16","termid":"MONDO:0016914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16q22 deletion syndrome","secondary_identifiers":["UMLS:C3281152","MEDGEN:482782","OMIM:614541","DOID:0060401","Orphanet:658540"],"synonyms":[{"name":"chromosome 16q22 deletion syndrome","type":"exact"},{"name":"chromosome 16q22 deletion syndrome, isolated cases","type":"exact"}],"termid":"MONDO:0013798","xrefs":{"Monarch":{"xref_id":"0013798"}}}


id: GO:0089722
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  {"annotated_genes":["SJAG_01960","SJAG_00276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93685,76955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990536"}]},"cv_name":"biological_process","definition":"The directed movement of phosphoenolpytuvate across a membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate transport","termid":"GO:0015714"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0089722","terms_by_termid":{"GO:1990536":null}}


id: FYPO:0001788
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id: MONDO:0004752
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurofibroma that affects the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart cancer","termid":"MONDO:0001340"},{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0004992"],"is_obsolete":false,"name":"neurofibroma of the heart","secondary_identifiers":["DOID:9300","UMLS:C1096349","MEDGEN:242755","NCIT:C5359"],"synonyms":[{"name":"Cardiac neurofibroma","type":"exact"},{"name":"heart neurofibroma","type":"exact"},{"name":"neurofibroma of heart","type":"exact"},{"name":"neurofibroma of the heart","type":"exact"}],"termid":"MONDO:0004752","xrefs":{"Monarch":{"xref_id":"0004752"}}}


id: MONDO:0017007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome X","termid":"MONDO:0017003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome X","secondary_identifiers":["Orphanet:263756","MEDGEN:1826028","UMLS:C5679688","GARD:20915"],"synonyms":[{"name":"partial deletion of chromosome Xq","type":"exact"},{"name":"partial deletion of the long arm of chromosome type X","type":"exact"},{"name":"partial monosomy of chromosome Xq","type":"exact"},{"name":"partial monosomy of the long arm of chromosome X","type":"exact"}],"termid":"MONDO:0017007","xrefs":{"Monarch":{"xref_id":"0017007"}}}


id: PBO:0040547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta 3-glucosyltransferase","termid":"PBO:0040547"}


id: FYPO:0002322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of all-trans-farnesyl diphosphate (FPP) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular FPP level","synonyms":[{"name":"decreased cellular 2-trans,6-trans-farnesyl diphosphate level","type":"exact"},{"name":"decreased cellular FPP accumulation","type":"related"},{"name":"decreased cellular FPP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular FPP level during vegetative growth","type":"exact"},{"name":"decreased cellular farnesyl diphosphate level","type":"broad"},{"name":"decreased cellular farnesyl pyrophosphate level","type":"broad"},{"name":"reduced cellular FPP level","type":"exact"}],"termid":"FYPO:0002322"}


id: GO:0097287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the Q nucleoside precursor 7-cyano-7-deazaguanine, also known as 2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile or preQo.","definition_xrefs":["GOC:yaf","PMID:364423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7-cyano-7-deazaguanine metabolic process","synonyms":[{"name":"7-cyano-7-deazaguanine metabolism","type":"exact"}],"termid":"GO:0097287"}


id: RO:0002231
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x 'has starts location' y if and only if there exists some process z such that x 'starts with' z and z 'occurs in' y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"RO:0002479"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_start_location","termid":"RO:0002231"}


id: PBO:0047430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 1","termid":"PBO:0047430"}


id: GO:1905471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K79 dimethylation.","definition_xrefs":["GOC:TermGenie","PMID:27541139","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K79 dimethylation (obsolete GO:1905471)","synonyms":[{"name":"regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"regulation of histone lysine H3 K79 dimethylation","type":"exact"}],"termid":"GO:1905471"}


id: GO:0034902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: endosulfan sulfate + H2O = endosulfan diol + sulfite.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endosulfan sulfate hydrolase activity (obsolete GO:0034902)","termid":"GO:0034902"}


id: GO:0070746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-35.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-35 binding","synonyms":[{"name":"IL-35 binding","type":"exact"}],"termid":"GO:0070746"}


id: MONDO:0014111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the LIM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 19 multiple types","secondary_identifiers":["UMLS:C3809004","MEDGEN:815334","DOID:0110263","OMIM:615277"],"synonyms":[{"name":"CTRCT19","type":"exact"},{"name":"LIM2 early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 19","type":"related"},{"name":"cataract 19, multiple types","type":"related"},{"name":"cataract type 19","type":"exact"},{"name":"early-onset non-syndromic cataract caused by mutation in LIM2","type":"exact"}],"termid":"MONDO:0014111","xrefs":{"Monarch":{"xref_id":"0014111"}}}


id: PBO:0073133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like lipid binding 5","termid":"PBO:0073133"}


id: PBO:0049444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, very large interferon inducible pseudogene 2","termid":"PBO:0049444"}


id: GO:0042218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-aminocyclopropane-1-carboxylate, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-aminocyclopropane-1-carboxylate metabolic process","termid":"GO:0018871"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate biosynthetic process","synonyms":[{"name":"1-aminocyclopropane-1-carboxylate anabolism","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate biosynthesis","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate formation","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate synthesis","type":"exact"}],"termid":"GO:0042218"}


id: MONDO:0019390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Susac syndrome (SS) is a rare disorder characterized by the triad of central nervous system (CNS) dysfunction, branch retinal artery occlusions (BRAOs) and sensorineural hearing loss (SNHL). It is presumably due to autoimmune-mediated occlusions of microvessels in the CNS, the retina, and the inner ear.","definition_xrefs":["Orphanet:838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Susac syndrome","secondary_identifiers":["NORD:1747","SCTID:702575003","MedDRA:10071573","MESH:D055955","GARD:7713","UMLS:C2717757","ICD9:348.39","EFO:1001856","icd11.foundation:1292480458","NCIT:C116363","MEDGEN:439270"],"synonyms":[{"name":"RED-M","type":"exact"},{"name":"Retinocochleocerebral vasculopathy","type":"exact"},{"name":"SICRET (small infarction of cochlear, retinal, and encephalic tissue) syndrome","type":"related"},{"name":"SICRET syndrome","type":"exact"},{"name":"retinopathy-encephalopathy-deafness associated with microangiopathy","type":"exact"},{"name":"small infarctions of cochlear, retinal and encephalic tissue","type":"exact"}],"termid":"MONDO:0019390","xrefs":{"Monarch":{"xref_id":"0019390"}}}


id: GO:0018891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyclohexanol, the monohydroxy derivative of cyclohexane. It is used as a solvent and blending agent.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cyclohexanol metabolic process","secondary_identifiers":["UM-BBD_pathwayID:chx"],"synonyms":[{"name":"cyclohexanol metabolism","type":"exact"}],"termid":"GO:0018891"}


id: PBO:0087865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of the basic leucine zipper (bZIP) family; required for transcription of genes involved in resistance to arsenic compounds; directly binds trivalent arsenic (As(III)) as does K. lactis ortholog, KIYAP8","termid":"PBO:0087865"}


id: GO:0070221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sulfide oxidation process that proceeds via the reaction catalyzed by sulfide:quinone oxidoreductase.","definition_xrefs":["MetaCyc:P222-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfide oxidation","termid":"GO:0019418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfide oxidation, using sulfide:quinone oxidoreductase","secondary_identifiers":["Reactome:R-HSA-1614517"],"synonyms":[{"name":"sulfide oxidation, using sulfide-quinone reductase","type":"exact"},{"name":"sulphide oxidation, using sulfide:quinone oxidoreductase","type":"exact"}],"termid":"GO:0070221"}


id: PBO:0043959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma D","termid":"PBO:0043959"}


id: MONDO:0011728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Involuntary twitching of the eyelid.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal dystonia","termid":"MONDO:0000477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"benign essential blepharospasm","secondary_identifiers":["MEDGEN:419660","icd11.foundation:1127235959","ICD9:333.81","MESH:D001764","DOID:529","SCTID:59026006","ICD10CM:G24.5","UMLS:C2930898"],"synonyms":[{"name":"BEB","type":"related"},{"name":"benign essential blepharospasm","type":"exact"},{"name":"blepharospasm","type":"exact"},{"name":"blepharospasm, benign essential","type":"related"}],"termid":"MONDO:0011728","xrefs":{"Monarch":{"xref_id":"0011728"}}}


id: PBO:0078621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 69","termid":"PBO:0078621"}


id: GO:0031234
data:
  {"annotated_genes":["SJAG_02605","SJAG_02233","SJAG_02444","SJAG_04026","SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110846],"is_not":false,"summary":null,"term":"GO:0031234"},{"annotations":[74636,80723,106810,75658],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its cytoplasmic surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of plasma membrane","termid":"GO:0019897"},{"relation_name":"part_of","term_name":"cytoplasmic side of plasma membrane","termid":"GO:0009898"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02233":null,"SJAG_02444":null,"SJAG_02605":null,"SJAG_03081":null,"SJAG_04026":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of cytoplasmic side of plasma membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to cytoplasmic side of plasma membrane","type":"narrow"},{"name":"extrinsic to internal leaflet of plasma membrane","type":"exact"},{"name":"extrinsic to internal side of plasma membrane","type":"exact"}],"termid":"GO:0031234","terms_by_termid":{"GO:0005834":null,"GO:0031234":null}}


id: GO:1903157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any iron ion transmembrane transporter activity that is involved in iron ion import into cell.","definition_xrefs":["ISBN:0-8249-3695-6","GOC:dos","GO_REF:0000061","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete iron ion transmembrane transporter activity involved in iron ion import into cell (obsolete GO:1903157)","synonyms":[{"name":"iron ion transmembrane transporter activity involved in iron import into cell","type":"related"},{"name":"iron ion transmembrane transporter activity involved in iron ion import into cell","type":"exact"},{"name":"iron transporter activity involved in iron import into cell","type":"related"},{"name":"iron transporter activity involved in iron ion import into cell","type":"exact"},{"name":"multicopper ferroxidase iron transport mediator activity involved in iron import into cell","type":"related"},{"name":"multicopper ferroxidase iron transport mediator activity involved in iron ion import into cell","type":"related"},{"name":"transmembrane iron ion permease activity involved in iron import into cell","type":"related"},{"name":"transmembrane iron ion permease activity involved in iron ion import into cell","type":"exact"},{"name":"transmembrane iron permease activity involved in iron import into cell","type":"related"},{"name":"transmembrane iron permease activity involved in iron ion import into cell","type":"exact"},{"name":"zinc, iron permease activity involved in iron import into cell","type":"related"},{"name":"zinc, iron permease activity involved in iron ion import into cell","type":"related"}],"termid":"GO:1903157"}


id: MONDO:1011785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal multi-organ developmental dysplasia, non-human animal","secondary_identifiers":["OMIA:001722"],"termid":"MONDO:1011785","xrefs":{"Monarch":{"xref_id":"1011785"}}}


id: PBO:0048153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forty-two-three domain containing 1","termid":"PBO:0048153"}


id: PBO:0002725
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wiskott-Aldrich syndrome","termid":"PBO:0002725"}


id: GO:0047202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-O-sinapoyl-beta-D-glucose + choline = O-sinapoylcholine + D-glucose.","definition_xrefs":["EC:2.3.1.91","RHEA:12024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-sinapoyltransferase activity","termid":"GO:0016753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"sinapoylglucose-choline O-sinapoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03075","MetaCyc:2.3.1.91-RXN"],"synonyms":[{"name":"1-O-(4-hydroxy-3,5-dimethoxycinnamoyl)-beta-D-glucose:choline 1-O-(4-hydroxy-3,5-dimethoxycinnamoyl)transferase activity","type":"related"},{"name":"sinapine synthase activity","type":"related"}],"termid":"GO:0047202"}


id: GO:0051857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring on or near the exterior of its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of organism on or near symbiont surface (obsolete GO:0051857)","synonyms":[{"name":"growth or development of organism during interaction with symbiont","type":"exact"},{"name":"growth or development of organism on or near symbiont surface","type":"exact"}],"termid":"GO:0051857"}


id: MONDO:0018066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy X is a sex chromosome anomaly with a variable phenotype caused by the presence of an extra X chromosome in females (47,XXX instead of 46,XX).","definition_xrefs":["Orphanet:3375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"trisomy X","secondary_identifiers":["MESH:C535318","MEDGEN:113140","NORD:1798","NCIT:C129718","icd11.foundation:423644907","UMLS:C0221033","GARD:5672","SCTID:35111009"],"synonyms":[{"name":"47 XXX syndrome","type":"related"},{"name":"47,XXX","type":"exact"},{"name":"47,XXX syndrome","type":"exact"},{"name":"Triplo X syndrome","type":"related"},{"name":"Triplo-X syndrome","type":"exact"},{"name":"XXX syndrome","type":"exact"},{"name":"triple X syndrome","type":"exact"},{"name":"triple-X chromosome syndrome","type":"related"},{"name":"triple-X female","type":"related"},{"name":"trisomy X","type":"exact"},{"name":"trisomy type X","type":"exact"}],"termid":"MONDO:0018066","xrefs":{"Monarch":{"xref_id":"0018066"}}}


id: PBO:0075224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 2 pseudogene 1","termid":"PBO:0075224"}


id: MONDO:0054733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 29","secondary_identifiers":["DOID:0111930","OMIM:618091","UMLS:C4748142","MEDGEN:1648499"],"synonyms":[{"name":"SPGF29","type":"related"},{"name":"spermatogenic failure 29","type":"exact"}],"termid":"MONDO:0054733","xrefs":{"Monarch":{"xref_id":"0054733"}}}


id: GO:0071026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading defective or aberrant RNAs within the cytoplasm.","definition_xrefs":["GOC:krc","PMID:18644474","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA surveillance","termid":"GO:0071025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic RNA surveillance","synonyms":[{"name":"cytoplasmic RNA quality control","type":"exact"},{"name":"cytoplasmic aberrant RNA catabolic process","type":"exact"}],"termid":"GO:0071026"}


id: PBO:0068735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 6, pseudogene","termid":"PBO:0068735"}


id: MONDO:0005989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic disease contracted by the ingestion or fetal transmission of toxoplasma gondii.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coccidiosis","termid":"MONDO:0005707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxoplasmosis","secondary_identifiers":["MESH:D014123","UMLS:C0040558","icd11.foundation:738999268","NCIT:C3418","SCTID:187192000","MEDGEN:21597","ICD9:130","EFO:0007517","ICD9:130.7","ICD9:130.9","DOID:9965","ICD10CM:B58"],"synonyms":[{"name":"Toxoplasma gondii caused disease or disorder","type":"exact"},{"name":"Toxoplasma gondii disease or disorder","type":"exact"},{"name":"Toxoplasma gondii infectious disease","type":"exact"},{"name":"disseminated toxoplasmosis","type":"exact"}],"termid":"MONDO:0005989","xrefs":{"Monarch":{"xref_id":"0005989"}}}


id: PBO:0031310
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle","termid":"PBO:0031310"}


id: PBO:0070775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 5","termid":"PBO:0070775"}


id: PBO:0058151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4446","termid":"PBO:0058151"}


id: FYPO:0008347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the trans-Golgi network is increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to Golgi apparatus","termid":"FYPO:0003936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to trans-Golgi network","termid":"FYPO:0008347"}


id: PBO:0091635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family Ftm4","termid":"PBO:0091635"}


id: PBO:0061868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory marker protein","termid":"PBO:0061868"}


id: FYPO:0002334
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a diploid cell with a single functional copy of a gene grows faster than a diploid with two (on no) functional copies.","definition_xrefs":["PMID:23531409","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"haploproficient","synonyms":[{"name":"haploproficient during mitotic cell cycle","type":"related"},{"name":"haploproficient during vegetative growth","type":"exact"}],"termid":"FYPO:0002334"}


id: GO:0062176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA metabolic process that results in the disassembly of R-loops. R-loops are three-stranded nucleic acid structures consisitng of an RNA:DNA heteroduplex and a looped-out non-template strand. Aberrant formation and persistence of R-loops block transcription elongation and cause DNA damage. Mechanisms that resolve R-loops are essential for genome stability.","definition_xrefs":["PMID:33986538","PMID:27252122","PMID:28790157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"R-loop processing","synonyms":[{"name":"R-loop disassembly","type":"exact"}],"termid":"GO:0062176"}


id: PBO:0075923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 15","termid":"PBO:0075923"}


id: PBO:0000325
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.25.1","termid":"PBO:0000325"}


id: FYPO:0007049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular stress response to zinc ions is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to zinc ion","termid":"FYPO:0001546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during stress response to zinc ion","synonyms":[{"name":"decreased RNA accumulation during stress response to zinc ion","type":"related"},{"name":"decreased RNA level during cellular response to excess zinc","type":"exact"},{"name":"decreased RNA level during cellular response to high zinc level","type":"exact"},{"name":"decreased RNA level during cellular response to replete zinc","type":"related"},{"name":"decreased RNA level during cellular stress response to zinc ion","type":"exact"},{"name":"decreased RNA level during response to zinc ion stress","type":"exact"},{"name":"decreased RNA level during response to zinc toxicity","type":"related"},{"name":"decreased RNA level during stress response to zinc","type":"exact"},{"name":"decreased RNA level during stress response to zinc ion during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during stress response to zinc ion during vegetative growth","type":"exact"},{"name":"decreased mRNA level during stress response to zinc ion","type":"narrow"},{"name":"decreased transcript level during stress response to zinc ion","type":"exact"},{"name":"reduced RNA level during stress response to zinc ion","type":"exact"}],"termid":"FYPO:0007049"}


id: PBO:0042687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cat eye syndrome chromosome region","termid":"PBO:0042687"}


id: MONDO:0025483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tumors or cancer of the mammary gland in animals (mammary glands, animal).","definition_xrefs":["MESH:D015674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mammary neoplasms, animal","secondary_identifiers":["OMIA:001777"],"synonyms":[{"name":"animal mammary carcinoma","type":"related"},{"name":"animal mammary carcinomas","type":"related"},{"name":"animal mammary neoplasm","type":"related"},{"name":"animal mammary neoplasms","type":"related"},{"name":"carcinoma, animal mammary","type":"related"},{"name":"carcinomas, animal mammary","type":"related"},{"name":"mammary carcinoma, animal","type":"related"},{"name":"mammary carcinomas, animal","type":"related"},{"name":"mammary neoplasm","type":"related"},{"name":"mammary neoplasm, animal","type":"related"},{"name":"mammary neoplasms","type":"related"},{"name":"neoplasm, animal mammary","type":"related"},{"name":"neoplasm, mammary","type":"related"},{"name":"neoplasms, animal mammary","type":"related"},{"name":"neoplasms, mammary","type":"related"}],"termid":"MONDO:0025483","xrefs":{"Monarch":{"xref_id":"0025483"}}}


id: MONDO:0018752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exercise-induced malignant hyperthermia","secondary_identifiers":["Orphanet:466650","MEDGEN:1814609","SCTID:735907005","GARD:21936","UMLS:C5700399"],"synonyms":[{"name":"Exertional heat stroke","type":"exact"}],"termid":"MONDO:0018752","xrefs":{"Monarch":{"xref_id":"0018752"}}}


id: PBO:0056900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIER family member 2","termid":"PBO:0056900"}


id: PR:Q10434
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An F-actin-capping protein subunit alpha-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin-capping protein subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.07","secondary_identifiers":["UniProtKB:Q10434"],"synonyms":[{"name":"SPAC12B10.07","type":"related"},{"name":"Spom972h-CAPZA2","type":"exact"}],"termid":"PR:Q10434"}


id: MONDO:0002118
data:
  {"annotated_genes":["SJAG_03361","SJAG_01143","SJAG_04881","SJAG_00516","SJAG_02977","SJAG_03986","SJAG_03371","SJAG_00933","SJAG_00440","SJAG_00260","SJAG_01895","SJAG_01941","SJAG_03375","SJAG_00864","SJAG_02330","SJAG_04000","SJAG_03677","SJAG_03400","SJAG_00093","SJAG_00394","SJAG_04621","SJAG_01183","SJAG_03787","SJAG_00846","SJAG_02463","SJAG_04335","SJAG_04978","SJAG_04260","SJAG_00136","SJAG_02231","SJAG_00471","SJAG_01896","SJAG_04277","SJAG_03280","SJAG_00118","SJAG_02208","SJAG_01185","SJAG_03182","SJAG_04013","SJAG_01370","SJAG_03453","SJAG_04148","SJAG_04017","SJAG_04001","SJAG_01374","SJAG_03994","SJAG_01144","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[85423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008368"},{"annotations":[85845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011422"},{"annotations":[87635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012672"},{"annotations":[87394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010359"},{"annotations":[86648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013836"},{"annotations":[85450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[86290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013589"},{"annotations":[87224,87225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014462"},{"annotations":[86511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"},{"annotations":[86846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007677"},{"annotations":[87262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013458"},{"annotations":[86478,86477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014891"},{"annotations":[85947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859328"},{"annotations":[86495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013898"},{"annotations":[86847,86848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020722"},{"annotations":[87020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013163"},{"annotations":[86255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014752"},{"annotations":[86180,86179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014817"},{"annotations":[86178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014818"},{"annotations":[86739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032580"},{"annotations":[86740,86741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032581"},{"annotations":[86737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032582"},{"annotations":[86265,86264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026726"},{"annotations":[85367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014099"},{"annotations":[86184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014257"},{"annotations":[87131,87130,87129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007763"},{"annotations":[87574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010645"},{"annotations":[87372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[85986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[86194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[87260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[86314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"},{"annotations":[85816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010916"},{"annotations":[86113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031062"},{"annotations":[87027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013782"},{"annotations":[85365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"},{"annotations":[85785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044726"},{"annotations":[85684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009968"},{"annotations":[86490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"},{"annotations":[85556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012700"},{"annotations":[87171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"},{"annotations":[86640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001187"}]},"cv_name":"mondo","definition":"A disease involving the renal system.","direct_ancestors":[{"relation_name":"is_a","term_name":"human 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disease","type":"exact"},{"name":"urinary system disease","type":"exact"},{"name":"urinary system disorder","type":"exact"},{"name":"urinary tract disease","type":"exact"},{"name":"urinary tract diseases","type":"exact"},{"name":"urinary tract disorder","type":"exact"},{"name":"urologic disease","type":"exact"},{"name":"urologic disorder","type":"exact"},{"name":"urological disease","type":"exact"},{"name":"urological diseases","type":"exact"},{"name":"urological disorder","type":"exact"},{"name":"urological disorders","type":"exact"}],"termid":"MONDO:0002118","terms_by_termid":{"MONDO:0001187":null,"MONDO:0003789":null,"MONDO:0007273":null,"MONDO:0007677":null,"MONDO:0007763":null,"MONDO:0008368":null,"MONDO:0009968":null,"MONDO:0010359":null,"MONDO:0010438":null,"MONDO:0010645":null,"MONDO:0010916":null,"MONDO:0011121":null,"MONDO:0011268":null,"MONDO:0011301":null,"MONDO:0011303":null,"MONDO:0011422":null,"MONDO:0012672":null,"MONDO:0012700":null,"MONDO:0013163":null,"MONDO:0013458":null,"MONDO:0013589":null,"MONDO:0013602":null,"MONDO:0013782":null,"MONDO:0013836":null,"MONDO:0013898":null,"MONDO:0014099":null,"MONDO:0014166":null,"MONDO:0014257":null,"MONDO:0014462":null,"MONDO:0014752":null,"MONDO:0014817":null,"MONDO:0014818":null,"MONDO:0014891":null,"MONDO:0014937":null,"MONDO:0020722":null,"MONDO:0026726":null,"MONDO:0031062":null,"MONDO:0032580":null,"MONDO:0032581":null,"MONDO:0032582":null,"MONDO:0044726":null,"MONDO:0054565":null,"MONDO:0859328":null},"xrefs":{"Monarch":{"xref_id":"0002118"}}}


id: PBO:0111832
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C5HC2 type","termid":"PBO:0111832"}


id: GO:0071469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus with pH > 7. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:go_curators","GOC:mah","Wikipedia:PH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaline pH","termid":"GO:0010446"},{"relation_name":"is_a","term_name":"cellular response to pH","termid":"GO:0071467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to alkaline pH","synonyms":[{"name":"cellular response to alkalinity","type":"broad"},{"name":"cellular response to basic pH","type":"exact"}],"termid":"GO:0071469"}


id: PBO:0089438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRC ubiquitin ligase complex subunit Raf2","termid":"PBO:0089438"}


id: GO:0014909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a smooth muscle cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["CL:0000192","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell migration","termid":"GO:0014812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle cell migration","termid":"GO:0014909"}


id: PBO:0074161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member F4","termid":"PBO:0074161"}


id: PBO:0040261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 14","termid":"PBO:0040261"}


id: GO:0071566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the activation of the small ubiquitin-related modifier UFM1, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["PMID:20018847","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"UFM1 activating enzyme activity","termid":"GO:0071566"}


id: PBO:0036331
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human COQ9","termid":"PBO:0036331"}


id: MONDO:0020794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, invasive colorectal adenocarcinoma characterized by the presence of sheets of malignant epithelial cells with vesicular nuclei, prominent nucleoli, and abundant eosinophilic cytoplasm. It usually has a favorable prognosis.","definition_xrefs":["NCIT:C43590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal adenocarcinoma","termid":"MONDO:0005008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"colorectal medullary carcinoma","secondary_identifiers":["MEDGEN:317525","UMLS:C1707438"],"synonyms":[{"name":"colorectal medullary carcinoma","type":"exact"}],"termid":"MONDO:0020794","xrefs":{"Monarch":{"xref_id":"0020794"}}}


id: FYPO:0003363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cytogamy does not occur. Cytogamy is the process that creates a single cell from two cells of complementary mating types.","definition_xrefs":["GO:0000755","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000301","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished cytogamy","synonyms":[{"name":"conjugation without cellular fusion during mating","type":"related"},{"name":"cytogamy abolished","type":"exact"}],"termid":"FYPO:0003363"}


id: PBO:0074035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 21","termid":"PBO:0074035"}


id: PBO:0047919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(10)(q22.1)","termid":"PBO:0047919"}


id: PBO:0082249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the mitochondrial processing protease (MPP); essential processing enzyme that cleaves the N-terminal targeting sequences from mitochondrially imported proteins","termid":"PBO:0082249"}


id: PBO:0046911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member E3","termid":"PBO:0046911"}


id: PR:Q10247
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G9.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C4G9.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.19","synonyms":[{"name":"Spom972h-SPAC4G9.19","type":"exact"}],"termid":"PR:Q10247"}


id: PBO:0034168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_between-species_paralogy_relationship_with","termid":"PBO:0034168"}


id: PBO:0026920
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K8_acetylation","termid":"PBO:0026920"}


id: GO:0047032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha-hydroxyglycyrrhetinate + NADP+ = 3-oxoglycyrrhetinate + H+ + NADPH.","definition_xrefs":["RHEA:20816","EC:1.1.1.230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-alpha-hydroxyglycyrrhetinate dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.230-RXN","KEGG_REACTION:R04099"],"synonyms":[{"name":"3alpha-hydroxyglycyrrhetinate dehydrogenase activity","type":"related"},{"name":"3alpha-hydroxyglycyrrhetinate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047032"}


id: MONDO:0032783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any aortic valve disease characterized by aortic stenosis and/or bicuspid aortic valve in which the cause of the disease is a mutation in the ROBO4 gene.","definition_xrefs":["OMIM:618496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial bicuspid aortic valve","termid":"MONDO:0007194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortic valve disease 3","secondary_identifiers":["DOID:0080977","MEDGEN:1681142","UMLS:C5193127"],"synonyms":[{"name":"AORTIC VALVE DISEASE 3","type":"related"},{"name":"AOVD3","type":"related"}],"termid":"MONDO:0032783","xrefs":{"Monarch":{"xref_id":"0032783"}}}


id: PBO:0084831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for translation of the COB mRNA; forms a complex with Cbp3p that binds to mt ribosomes near the polypeptide tunnel exit and promotes efficient translation of the COB mRNA; Cbp3p-Cbp6p complex also interacts with newly synthesized cytochrome b (Cobp) and Cbp4p to promote assembly of Cobp into the cytochrome bc1 complex; Cbp3p-Cbp6p complex is sequestered if assembly of Complex III is blocked, downregulating COB mRNA translation","termid":"PBO:0084831"}


id: PR:000027506
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc25 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase inducer phosphatase","pombase_gene_id":"SPAC24H6.05","synonyms":[{"name":"CDC25","type":"related"},{"name":"MIH1","type":"related"},{"name":"Mitosis initiation protein","type":"exact"},{"name":"P80","type":"exact"},{"name":"cdc25","type":"exact"}],"termid":"PR:000027506"}


id: MONDO:0800484
data:
  {"annotated_genes":["SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010946"},{"annotations":[86589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009867"},{"annotations":[86378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008685"}]},"cv_name":"mondo","definition":"A metabolic heart condition characterized by variable cardiac hypertrophy, ventricular pre-excitation, and aberrant glycogen storage in the cardiac tissue due to a pathogenic variant in PRKAG2 that results in a net anabolic effect in cardiac cells.","definition_xrefs":["PMID:29298659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"PRKAG2-related cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PRKAG2 cardiac syndrome","type":"exact"},{"name":"PRKAG2 cardiomyopathy","type":"exact"},{"name":"PRKAG2 syndrome","type":"exact"},{"name":"PRKAG2-related cardiomyopathy","type":"exact"}],"termid":"MONDO:0800484","terms_by_termid":{"MONDO:0008685":null,"MONDO:0009867":null,"MONDO:0010946":null},"xrefs":{"Monarch":{"xref_id":"0800484"}}}


id: GO:0042672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a retinal cone cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell fate specification","termid":"GO:0043704"},{"relation_name":"part_of","term_name":"retinal cone cell fate commitment","termid":"GO:0046551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell fate specification","termid":"GO:0042672"}


id: GO:0017067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + L-tyrosine methyl ester = L-tyrosine methyl ester 4-sulfate + adenosine 3',5'-diphosphate + H+.","definition_xrefs":["EC:2.8.2.9","RHEA:19977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"tyrosine-ester sulfotransferase activity","secondary_identifiers":["GO:0008128","KEGG_REACTION:R04213","MetaCyc:TYROSINE-ESTER-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:L-tyrosine-methyl-ester sulfotransferase activity","type":"related"},{"name":"L-tyrosine methyl ester sulfotransferase activity","type":"related"},{"name":"aryl sulfotransferase IV","type":"related"},{"name":"tyrosine-ester sulphotransferase activity","type":"exact"}],"termid":"GO:0017067"}


id: SO:0002143
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 2B modification where the modification is the acetylation of the residue.","definition_xrefs":["ISBN:0815341059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_2B_acetylation_site","synonyms":[{"name":"H2Bac","type":"exact"},{"name":"histone 2B acetylation site","type":"exact"}],"termid":"SO:0002143"}


id: GO:0044030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA methylation (obsolete GO:0044030)","termid":"GO:0044030"}


id: GO:0015374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neutral/basic amino acid(out) + Na+(out) + Cl-(out) = neutral/basic amino acid(in) + Na+(in) + Cl-(in).","definition_xrefs":["TC:2.A.22.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"neutral, basic amino acid:sodium:chloride symporter activity","synonyms":[{"name":"neutral, cationic amino acid:sodium:chloride symporter activity","type":"related"}],"termid":"GO:0015374"}


id: GO:0045478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the fusome, a large intracellular spectrin-rich structure found in insect germline cells and mammalian hematopoietic cells.","definition_xrefs":["GOC:dph","GOC:jl","GOC:go_curators","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fusome organization","synonyms":[{"name":"fusome organisation","type":"exact"},{"name":"fusome organization and biogenesis","type":"related"}],"termid":"GO:0045478"}


id: PBO:0030540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_cAMP_level_during_cellular_response_to_glucose_stimulus","termid":"PBO:0030540"}


id: MONDO:0003355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the ovary. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C5234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian sarcoma","termid":"MONDO:0002225"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovary leiomyosarcoma","secondary_identifiers":["EFO:0006718","UMLS:C1335163","MEDGEN:233275","DOID:5263"],"synonyms":[{"name":"leiomyosarcoma of ovary","type":"exact"},{"name":"leiomyosarcoma of the ovary","type":"exact"},{"name":"ovarian leiomyosarcoma","type":"exact"},{"name":"ovary leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003355","xrefs":{"Monarch":{"xref_id":"0003355"}}}


id: PBO:0059583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioadenosine phosphorylase","termid":"PBO:0059583"}


id: PBO:0055834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and fibronectin type III domain containing 4","termid":"PBO:0055834"}


id: FYPO:0000161
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"}],"single_locus_phenotype":[{"annotations":[119709,119800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[119469,119844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which contractile ring assembly is abnormal. Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["GO:1903475","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0000032","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal actomyosin contractile ring assembly","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_01143"],"single_locus_genotype_uniquenames":["sty1delta","mid1delta"],"synonyms":[{"name":"abnormal actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"abnormal actomyosin contractile ring formation","type":"related"},{"name":"abnormal contractile ring assembly","type":"exact"},{"name":"abnormal cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"abnormal cytokinetic contractile ring assembly","type":"exact"},{"name":"abnormal cytokinetic ring assembly","type":"related"},{"name":"abnormal cytokinetic ring formation","type":"related"},{"name":"abnormal mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0000161","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000248":null,"FYPO:0000729":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null}}


id: PBO:0060010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 30","termid":"PBO:0060010"}


id: PBO:0005279
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. Pombe Centromere","termid":"PBO:0005279"}


id: GO:0106082
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96102],"is_not":false,"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of sucrose from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:11136464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate import across plasma membrane","termid":"GO:0098704"},{"relation_name":"is_a","term_name":"sucrose transmembrane transport","termid":"GO:1904982"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sucrose import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106082","terms_by_termid":{"GO:0106082":null}}


id: PBO:0076427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 3","termid":"PBO:0076427"}


id: MONDO:0016299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system malformation syndrome characterized by holoprosencephaly with microcephaly, abnormal eye morphology (hypotelorism, cyclopia, exophthalmos), nasal anomalies (single nostril or absent nose), and cleft lip/palate, combined with signs of caudal regression (sacral agenesis, sirenomelia with absent external genitalia).","definition_xrefs":["Orphanet:2165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"holoprosencephaly-caudal dysgenesis syndrome","secondary_identifiers":["UMLS:C4749731","ICD10CM:Q04.2","GARD:2722","MEDGEN:1653112"],"termid":"MONDO:0016299","xrefs":{"Monarch":{"xref_id":"0016299"}}}


id: MONDO:0014347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Rothmund-Thomson syndrome","termid":"MONDO:0010002"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0005093"],"is_obsolete":false,"name":"Rothmund-Thomson syndrome, type 3","secondary_identifiers":["OMIM:615789","MEDGEN:862776","UMLS:C4014339"],"synonyms":[{"name":"short stature with microcephaly and distinctive facies","type":"exact"}],"termid":"MONDO:0014347","xrefs":{"Monarch":{"xref_id":"0014347"}}}


id: PBO:0116404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family protein (FoldSeek), possible PF15874 family (Pfam-N), implicated in mRNA splicing ot RNA surveillance","termid":"PBO:0116404"}


id: MONDO:0004078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intrahepatic cholangiocarcinoma that produces abundant mucin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct mucinous adenocarcinoma","termid":"MONDO:0002739"},{"relation_name":"is_a","term_name":"intrahepatic cholangiocarcinoma","termid":"MONDO:0003210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"mucinous intrahepatic cholangiocarcinoma","secondary_identifiers":["UMLS:C1513718","NCIT:C41618","MEDGEN:270842","DOID:7024"],"synonyms":[{"name":"mucin-producing intrahepatic cholangiocarcinoma","type":"exact"},{"name":"mucinous intrahepatic cholangiocarcinoma","type":"exact"}],"termid":"MONDO:0004078","xrefs":{"Monarch":{"xref_id":"0004078"}}}


id: MOD:00220
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to a 4-hydroxy-L-arginine.","definition_xrefs":["RESID:AA0215","PubMed:10966817","PubMed:7650037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"hydroxylated arginine","termid":"MOD:00682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-L-arginine","synonyms":[{"name":"(2S,4Xi)-2-amino-5-[(diaminomethylidene)amino]-4-hydroxypentanoic acid","type":"exact"},{"name":"2-amino-5-(carbamimidamido)-4-hydroxypentanoic acid [tautomer]","type":"exact"},{"name":"2-amino-5-[(aminoiminomethyl)amino]-4-hydroxypentanoic acid [tautomer]","type":"exact"},{"name":"2-amino-5-guanidino-4-hydroxypentanoic acid","type":"exact"},{"name":"4-hydroxy-L-arginine","type":"exact"},{"name":"4-hydroxylated L-arginine","type":"exact"},{"name":"4HyArg","type":"exact"},{"name":"C(gamma)-hydroxyarginine","type":"exact"},{"name":"MOD_RES 4-hydroxyarginine","type":"exact"},{"name":"gamma-hydroxyarginine","type":"exact"}],"termid":"MOD:00220"}


id: MONDO:0007622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete flood factor deficiency (obsolete MONDO:0007622)","secondary_identifiers":["OMIM:136150","MESH:C565009"],"synonyms":[{"name":"flood factor deficiency","type":"exact"}],"termid":"MONDO:0007622","xrefs":{"Monarch":{"xref_id":"0007622"}}}


id: GO:0141049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathionylated protein (PSSG) + glutathione (GSH) = protein-thiol (PSH) + glutathione disulfide (GSSG). The reaction may proceed via a 'monothiol' or 'dithiol' mechanism.","definition_xrefs":["PMID:23397885","PMID:33932870","PMID:36771108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0015036","GO:0003674","GO:0140096","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"protein-glutathione oxidoreductase (glutathione) activity","synonyms":[{"name":"glutaredoxin activity","type":"broad"},{"name":"glutathione oxidoreductase activity","type":"broad"}],"termid":"GO:0141049"}


id: GO:0061681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The Entner-Doudoroff pathway that proceeds through a D-gluconate intermediate and yields pyruvate and D-glyceraldehyde-3-phosphate.","definition_xrefs":["PMID:12921536","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"is_a","term_name":"Entner-Doudoroff pathway through gluconate","termid":"GO:0061679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"Entner-Doudoroff pathway through gluconate to D-glyceraldehyde-3-phosphate","secondary_identifiers":["MetaCyc:PWY-2221"],"termid":"GO:0061681"}


id: MONDO:0001594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An bursitis involving a pathogenic inflammatory response in the calcaneal tendon.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bursitis","termid":"MONDO:0002471"},{"relation_name":"is_a","term_name":"tendinitis","termid":"MONDO:0004857"},{"relation_name":"is_a","term_name":"skeletal ligament disorder","termid":"MONDO:0045004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Achilles bursitis","secondary_identifiers":["ICD9:726.71","DOID:12857","icd11.foundation:426746156","MEDGEN:508442","UMLS:C0149846"],"synonyms":[{"name":"Achilles bursitis or tendinitis","type":"exact"},{"name":"Haglund's deformity","type":"exact"},{"name":"Haglund's disease","type":"exact"},{"name":"capped hock","type":"exact"}],"termid":"MONDO:0001594","xrefs":{"Monarch":{"xref_id":"0001594"}}}


id: PBO:0054672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2078","termid":"PBO:0054672"}


id: PBO:0068801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 38, pseudogene","termid":"PBO:0068801"}


id: PBO:0003750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L17","termid":"PBO:0003750"}


id: GO:1990201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of alkanesulfonate monooxygenase activity. Involved in the utilization of alkanesulfonates as sulfur sources under conditions of sulfate or cysteine starvation, catalyzing the conversion of alkanesulfonates into aldehydes and sulfite. In E.coli the complex consists of a SsuD tetramer.","definition_xrefs":["PMID:16997955","GOC:bhm","PMID:10480865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"alkanesulfonate monooxygenase complex","synonyms":[{"name":"SsuD complex","type":"narrow"}],"termid":"GO:1990201"}


id: PBO:0040256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATG10 intronic transcript 1","termid":"PBO:0040256"}


id: GO:0033171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the assembly of proteins such as Rad51p onto single-stranded (ss) DNA to form a helical nucleoprotein filament.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleoprotein filament-forming ATPase activity (obsolete GO:0033171)","synonyms":[{"name":"nucleoprotein filament-forming ATPase activity","type":"exact"}],"termid":"GO:0033171"}


id: MONDO:0021412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the maxillary sinus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus disorder","termid":"MONDO:0001735"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp of maxillary sinus","secondary_identifiers":["UMLS:C0264239","NCIT:C3931","ICD9:471.8","SCTID:29074008","MEDGEN:120498"],"synonyms":[{"name":"maxillary antral polyp","type":"exact"},{"name":"maxillary sinus polyp","type":"exact"},{"name":"polyp of the maxillary sinus","type":"exact"}],"termid":"MONDO:0021412","xrefs":{"Monarch":{"xref_id":"0021412"}}}


id: PR:O42934
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chp2 gene.","definition_xrefs":["UniProtKB:O42934","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromo domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.10","synonyms":[{"name":"Spom972h-chp2","type":"exact"}],"termid":"PR:O42934"}


id: PBO:0048810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit beta 4","termid":"PBO:0048810"}


id: PBO:0064205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLAG1 like zinc finger 1","termid":"PBO:0064205"}


id: MONDO:0020281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metabolic disease with pigmentary retinitis (obsolete MONDO:0020281)","secondary_identifiers":["Orphanet:98713"],"termid":"MONDO:0020281","xrefs":{"Monarch":{"xref_id":"0020281"}}}


id: MONDO:0007983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schmid metaphyseal chondrodysplasia is a rare disorder characterized by moderately short stature with short limbs, coxa vara, bowlegs and an abnormal gait.","definition_xrefs":["Orphanet:174"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metaphyseal chondrodysplasia","termid":"MONDO:0000138"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Schmid metaphyseal chondrodysplasia","secondary_identifiers":["DOID:0080021","MEDGEN:78550","SCTID:29248006","MESH:C537352","OMIM:156500","UMLS:C0265289","GARD:7029","NORD:1444"],"synonyms":[{"name":"Japanese type spondylometaphyseal dysplasia","type":"exact"},{"name":"MCDS","type":"exact"},{"name":"Metaphyseal Chondrodysplasia, Schmid Type","type":"exact"},{"name":"Schmid type metaphyseal dysplasia","type":"exact"},{"name":"metaphyseal chondrodysplasia Schmid type","type":"exact"},{"name":"metaphyseal chondrodysplasia, Schmid type","type":"exact"},{"name":"spondylometaphyseal dysplasia, Japanese type","type":"exact"}],"termid":"MONDO:0007983","xrefs":{"Monarch":{"xref_id":"0007983"}}}


id: PBO:0047488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin-fold anticodon binding domain containing 1","termid":"PBO:0047488"}


id: PBO:0109123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gfo/Idh/MocA-like oxidoreductase domain containing 3, pseudogene","termid":"PBO:0109123"}


id: GO:0052092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of nutrient release by host","termid":"GO:0052091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nutrient release by host","synonyms":[{"name":"activation by symbiont of nutrient release from host","type":"narrow"},{"name":"positive regulation by symbiont of nutrient release from host","type":"exact"},{"name":"promotion of nutrient release from host","type":"exact"},{"name":"stimulation by symbiont of nutrient release from host","type":"narrow"},{"name":"up regulation by symbiont of nutrient release from host","type":"exact"},{"name":"up-regulation by symbiont of nutrient release from host","type":"exact"},{"name":"upregulation by symbiont of nutrient release from host","type":"exact"}],"termid":"GO:0052092"}


id: GO:0044869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a host organism decreases viral exo-alpha-sialidase activity, the catalysis of the hydrolysis of peptide bonds in a protein.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of viral exo-alpha-sialidase activity (obsolete GO:0044869)","termid":"GO:0044869"}


id: MOD:01545
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01545"}


id: GO:0000794
data:
  {"annotated_genes":["SJAG_03026","SJAG_07002","SJAG_02267","SJAG_00172","SJAG_04748","SJAG_02490","SJAG_02652","SJAG_02771","SJAG_01605","SJAG_01410","SJAG_03438","SJAG_03843","SJAG_01677","SJAG_03418","SJAG_04950","SJAG_05333","SJAG_04303"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75459,76193,79258,80594,91256],"is_not":false,"summary":null,"term":"GO:0000794"},{"annotations":[79161,73252,74252],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030896"},{"annotations":[89399,111433,91809,95084,105195,90674,109859,115838,109952],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030998"}]},"cv_name":"cellular_component","definition":"A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct nuclear chromosome.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"is_a","term_name":"condensed chromosome","termid":"GO:0000793"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00172":null,"SJAG_01410":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_02267":null,"SJAG_02490":null,"SJAG_02652":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03418":null,"SJAG_03438":null,"SJAG_03843":null,"SJAG_04303":null,"SJAG_04748":null,"SJAG_04950":null,"SJAG_05333":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"condensed nuclear chromosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"meiotic chromosome","type":"related"},{"name":"nuclear mitotic chromosome","type":"related"}],"termid":"GO:0000794","terms_by_termid":{"GO:0000794":null,"GO:0030896":null,"GO:0030998":null}}


id: PBO:0044420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 4","termid":"PBO:0044420"}


id: GO:1902360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any conversion of ds siRNA to ss siRNA that is involved in gene silencing by small RNA.","definition_xrefs":["GOC:vw","GOC:TermGenie","PMID:19239886"],"gene_count":0,"genotype_count":0,"name":"obsolete conversion of ds siRNA to ss siRNA involved in gene silencing by small RNA (obsolete GO:1902360)","synonyms":[{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in RNA interference-like chromatin silencing","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in RNA-mediated chromatin silencing","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in RNA-mediated transcriptional silencing","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in RNAi-directed chromatin silencing","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in RNAi-like chromatin silencing","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in chromatin silencing by small RNA","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in small RNA-mediated heterochromatic silencing","type":"related"},{"name":"conversion of ds siRNA to ss siRNA involved in RNA interference-like chromatin silencing","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in RNA-mediated chromatin silencing","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in RNA-mediated transcriptional silencing","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in RNAi-directed chromatin silencing","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in RNAi-like chromatin silencing","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in chromatin silencing by small RNA","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in small RNA-mediated heterochromatic silencing","type":"exact"}],"termid":"GO:1902360"}


id: MONDO:0016310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Niemann-Pick disease type C","termid":"MONDO:0018982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005046","MONDO:0002525","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"Niemann-Pick disease type C, adult neurologic onset","secondary_identifiers":["icd11.foundation:77127214","NANDO:1200065","NANDO:2201209","Orphanet:216986","GARD:20508","UMLS:C5680869","MEDGEN:1826101"],"termid":"MONDO:0016310","xrefs":{"Monarch":{"xref_id":"0016310"}}}


id: PBO:0078214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-7","termid":"PBO:0078214"}


id: MONDO:0020264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar degenerescence and spastic paraparesis with an oculomotor anomaly (obsolete MONDO:0020264)","secondary_identifiers":["Orphanet:98694"],"termid":"MONDO:0020264","xrefs":{"Monarch":{"xref_id":"0020264"}}}


id: PBO:0086817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YLR415C is not an essential gene","termid":"PBO:0086817"}


id: MOD:01708
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with an isotope tagged reagent acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"},{"relation_name":"is_a","term_name":"isotope tagged reagent acylated residue","termid":"MOD:01705"},{"relation_name":"is_a","term_name":"isotope tagged reagent N-acylated residue","termid":"MOD:01706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotope tagged reagent alpha-amino acylated residue","termid":"MOD:01708"}


id: MONDO:0023646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lipodermatosclerosis refers to changes in the skin of the lower legs. It is a form of panniculitis (inflammation of the layer of fat under the skin). Signs and symptoms include pain, hardening of skin, change in skin color (redness), swelling, and a tapering of the legs above the ankles. The exact underlying cause is unknown; however, it appears to be associated with venous insufficiency and/or obesity. Treatment usually includes compression therapy.","definition_xrefs":["GARD:0009671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"panniculitis","termid":"MONDO:0006591"},{"relation_name":"is_a","term_name":"localized scleroderma","termid":"MONDO:0019562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"lipodermatosclerosis","secondary_identifiers":["GARD:9671","icd11.foundation:473315619","SCTID:410016009","MESH:C537026","UMLS:C0406500","MEDGEN:140802"],"synonyms":[{"name":"acute lipodermatosclerosis","type":"related"},{"name":"hypodermitis sclerodermaformis","type":"related"},{"name":"sclerosing panniculitis","type":"related"}],"termid":"MONDO:0023646","xrefs":{"Monarch":{"xref_id":"0023646"}}}


id: MONDO:0003142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primitive neuroectodermal tumor that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system primitive neuroectodermal neoplasm","termid":"MONDO:0000640"},{"relation_name":"is_a","term_name":"brain cancer","termid":"MONDO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intracranial primitive neuroectodermal tumor","secondary_identifiers":["UMLS:C1334246","MEDGEN:272770","NCIT:C5817","DOID:4788"],"synonyms":[{"name":"brain primitive neuroectodermal tumor","type":"exact"},{"name":"brain primitive neuroectodermal tumour","type":"exact"},{"name":"intracranial PNET","type":"exact"},{"name":"intracranial primitive neuroectodermal neoplasm","type":"exact"},{"name":"intracranial primitive neuroectodermal tumor","type":"exact"},{"name":"primitive neuroectodermal tumor of brain","type":"exact"},{"name":"primitive neuroectodermal tumour of brain","type":"exact"}],"termid":"MONDO:0003142","xrefs":{"Monarch":{"xref_id":"0003142"}}}


id: MONDO:0010739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Taqi polymorphism","secondary_identifiers":["OMIM:313480","MEDGEN:374172","UMLS:C1839238"],"synonyms":[{"name":"TAQ1","type":"related"},{"name":"TaqI polymorphism","type":"related"},{"name":"Taqi polymorphism","type":"exact"}],"termid":"MONDO:0010739","xrefs":{"Monarch":{"xref_id":"0010739"}}}


id: PBO:0072545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 75","termid":"PBO:0072545"}


id: PBO:0068860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 100, pseudogene","termid":"PBO:0068860"}


id: FYPO:0000766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of N-ethylmaleimide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to N-ethylmaleimide","synonyms":[{"name":"resistance to N-ethylmaleimide during mitotic cell cycle","type":"related"},{"name":"resistance to N-ethylmaleimide during vegetative growth","type":"exact"},{"name":"resistant to N-ethylmaleimide","type":"exact"}],"termid":"FYPO:0000766"}


id: PBO:0049414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2D, retinal","termid":"PBO:0049414"}


id: MONDO:0100528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A partial deletion of the short arm of chromosome 16 characterized by developmental delay, intellectual disability, speech delay, autism spectrum disorder, epilepsy, hypogonadism, and hypotonia. The behavioral profile includes impulsivity, compulsivity, stubbornness, manipulative behaviors, temper tantrums, and aggressive behaviors.","definition_xrefs":["Orphanet:500055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hao-Fountain syndrome","termid":"MONDO:0014805"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 16","termid":"MONDO:0016894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Hao-Fountain syndrome due to 16p13.2 microdeletion","secondary_identifiers":["GARD:17920","UMLS:C5680086","MEDGEN:1804697"],"synonyms":[{"name":"16p13.2 microdeletion syndrome","type":"exact"},{"name":"Del(16)(p13.2)","type":"exact"},{"name":"chromosome 16P13.2 deletion syndrome","type":"exact"},{"name":"chromosome 16p13.2 deletion syndrome","type":"exact"},{"name":"monosomy 16p13.2","type":"exact"}],"termid":"MONDO:0100528","xrefs":{"Monarch":{"xref_id":"0100528"}}}


id: MONDO:0008178
data:
  {"annotated_genes":["SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87073],"is_not":false,"summary":null,"term":"MONDO:0008178"}]},"cv_name":"mondo","definition":"A rare autosomal dominant inherited disorder caused by mutations in the VCP gene. It can affect the muscles, bones, and brain. Patients may develop myopathy that initially involves the muscles of the hips and shoulders and as the disorder progresses it may affect the cardiac and respiratory muscles, leading to life-threatening cardiac and pulmonary failure. Approximately half of the adults develop Paget disease of bone, and approximately one-third develop frontotemporal dementia.","definition_xrefs":["NCIT:C122663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body myopathy with Paget disease of bone and frontotemporal dementia","termid":"MONDO:0000507"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"inclusion body myopathy with Paget disease of bone and frontotemporal dementia type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111385","UMLS:C4551951","MESH:C563476","OMIM:167320","MEDGEN:1641069"],"synonyms":[{"name":"IBMPFD1","type":"related"},{"name":"inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia 1","type":"related"},{"name":"inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia type 1","type":"exact"},{"name":"inclusion body myopathy with early-onset paget disease and frontotemporal dementia 1","type":"exact"},{"name":"lower motor neuron degeneration with Paget-like bone disease","type":"related"},{"name":"multisystem proteinopathy 1","type":"related"},{"name":"muscular dystrophy, limb-girdle, with Paget disease of bone","type":"related"},{"name":"pagetoid amyotrophic lateral sclerosis","type":"related"}],"termid":"MONDO:0008178","terms_by_termid":{"MONDO:0008178":null},"xrefs":{"Monarch":{"xref_id":"0008178"}}}


id: PBO:0000594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methyl-5-thioadenosine phosphorylase (predicted)","termid":"PBO:0000594"}


id: GO:1901166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any neural crest cell migration that is involved in autonomic nervous system development.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell migration","termid":"GO:0001755"},{"relation_name":"part_of","term_name":"autonomic nervous system development","termid":"GO:0048483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell migration involved in autonomic nervous system development","termid":"GO:1901166"}


id: PR:O74558
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mob2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maintenance of ploidy protein mob2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.04c","synonyms":[{"name":"Spom972h-mob2","type":"exact"}],"termid":"PR:O74558"}


id: GO:2000386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ovarian follicle development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of ovarian follicle development","termid":"GO:2000354"},{"relation_name":"positively_regulates","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ovarian follicle development","synonyms":[{"name":"positive regulation of follicular phase","type":"related"}],"termid":"GO:2000386"}


id: PBO:0072573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase regulatory TP53 inducible subunit M2B","termid":"PBO:0072573"}


id: PBO:0078603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 16","termid":"PBO:0078603"}


id: PBO:0072548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory associated protein of MTOR complex 1","termid":"PBO:0072548"}


id: PBO:0070955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 10","termid":"PBO:0070955"}


id: FYPO:0007142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after exposure to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability following cellular response to ionizing radiation","synonyms":[{"name":"decreased viability following cellular response to ionizing radiation","type":"exact"},{"name":"loss of cell population viability following cellular response to ionizing radiation","type":"exact"},{"name":"loss of viability following cellular response to IR","type":"exact"},{"name":"loss of viability following cellular response to gamma radiation","type":"narrow"},{"name":"loss of viability following ionizing radiation exposure","type":"exact"},{"name":"reduced viability following cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0007142"}


id: PBO:0027463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_intragenic_meiotic_recombination","termid":"PBO:0027463"}


id: GO:2001174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H2B conserved C-terminal lysine ubiquitination.","definition_xrefs":["PMID:17576814"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H2B conserved C-terminal lysine ubiquitination (obsolete GO:2001174)","synonyms":[{"name":"negative regulation of budding yeast H2B K123 ubiquitination","type":"related"},{"name":"negative regulation of fission yeast H2B K119 ubiquitination","type":"related"},{"name":"negative regulation of mammalian H2B K120 ubiquitination","type":"related"}],"termid":"GO:2001174"}


id: PBO:0002247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial type II fatty acid synthase component (predicted)","termid":"PBO:0002247"}


id: MONDO:0007653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genochondromatosis","secondary_identifiers":["MESH:C563215","icd11.foundation:1222756922","MEDGEN:224887","SCTID:389264005","UMLS:C1300229","OMIM:137360","GARD:10621"],"synonyms":[{"name":"genochondromatosis","type":"exact"}],"termid":"MONDO:0007653","xrefs":{"Monarch":{"xref_id":"0007653"}}}


id: GO:0070320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of an inwardly rectifying potassium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel inhibitor activity","termid":"GO:0019870"},{"relation_name":"negatively_regulates","term_name":"inward rectifier potassium channel activity","termid":"GO:0005242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0005215"},{"rel_name":"negatively_regulates","termid":"GO:0005215"},{"rel_name":"negatively_regulates","termid":"GO:0022857"},{"rel_name":"regulates","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0005215","GO:0140678","GO:0022857"],"is_obsolete":false,"name":"inward rectifier potassium channel inhibitor activity","termid":"GO:0070320"}


id: PR:Q9P783
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate-rich WD repeat-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein rrb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.07","secondary_identifiers":["UniProtKB:Q9P783"],"synonyms":[{"name":"Spom972h-GRWD1","type":"exact"}],"termid":"PR:Q9P783"}


id: MONDO:1010665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Evans syndrome that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Evans syndrome, non-human animal","termid":"MONDO:1010082"},{"relation_name":"is_a","term_name":"thrombocytopenia, horse","termid":"MONDO:1010661"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evans syndrome, horse","secondary_identifiers":["OMIA:001286-9796"],"termid":"MONDO:1010665","xrefs":{"Monarch":{"xref_id":"1010665"}}}


id: MONDO:0013878
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86514],"is_not":false,"summary":null,"term":"MONDO:0013878"}]},"cv_name":"mondo","definition":"Any pulmonary fibrosis and/or bone marrow failure, Telomere-related in which the cause of the disease is a mutation in the TERT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete idiopathic pulmonary fibrosis (obsolete MONDO:0008345)","termid":"MONDO:0008345"},{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614742","MEDGEN:766531","EFO:1001501","UMLS:C3553617"],"synonyms":[{"name":"PFBMFT1","type":"related"},{"name":"TERT pulmonary fibrosis and/or bone marrow failure, Telomere-related","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, TELOMERE-RELATED, 1","type":"related"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related caused by mutation in TERT","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 1","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, type 1","type":"exact"}],"termid":"MONDO:0013878","terms_by_termid":{"MONDO:0013878":null},"xrefs":{"Monarch":{"xref_id":"0013878"}}}


id: PBO:0017776
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by canine rab8","termid":"PBO:0017776"}


id: GO:0070115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers that surround an organellar chromatophore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"organellar chromatophore","termid":"GO:0070111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"organellar chromatophore intermembrane space","synonyms":[{"name":"Paulinella-type chromatophore intermembrane space","type":"exact"}],"termid":"GO:0070115"}


id: SO:0002113
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A lncRNA transcript containing a retained intron.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_primary_transcript","termid":"SO:0002035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA_with_retained_intron","synonyms":[{"name":"lncRNA with retained intron","type":"exact"},{"name":"lncRNA_retained_intron","type":"exact"}],"termid":"SO:0002113"}


id: MONDO:0001430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal neovascularization","termid":"MONDO:0006713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"deep corneal vascularisation","secondary_identifiers":["SCTID:2102007","UMLS:C0155095","DOID:12087","MEDGEN:509784","ICD9:370.63"],"synonyms":[{"name":"deep vascularization of cornea","type":"exact"}],"termid":"MONDO:0001430","xrefs":{"Monarch":{"xref_id":"0001430"}}}


id: MONDO:0011323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any syndromic disease characterized by severe hypoplasia of the nose and eyes, palatal abnormalities, deficient taste and smell, inguinal hernias, hypogonadotropic hypogonadism with cryptorchidism, and normal intelligence that occurs due to variation in the SMCHD1 gene.","definition_xrefs":["OMIM:603457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arhinia, choanal atresia, and microphthalmia","secondary_identifiers":["SCTID:720511000","Orphanet:1135","MEDGEN:355084","UMLS:C1863878","MESH:C537429","Orphanet:2250"],"synonyms":[{"name":"BAMS","type":"exact"},{"name":"Bosma Arhinia Microphthalmia Syndrome","type":"exact"},{"name":"Bosma Henkin Christiansen syndrome","type":"exact"},{"name":"Bosma arhinia microphthalmia syndrome","type":"exact"},{"name":"Bosma arhinia-microphthalmia syndrome","type":"exact"},{"name":"Bosma-Henkin-Christiansen syndrome","type":"exact"},{"name":"arhinia choanal atresia microphthalmia","type":"exact"},{"name":"arrhinia-choanal atresia-microphthalmia syndrome","type":"exact"},{"name":"congenital absence of nose and anterior nasopharynx","type":"related"},{"name":"hyposmia-nasal and ocular hypoplasia-hypogonadotropic hypogonadism syndrome","type":"exact"}],"termid":"MONDO:0011323","xrefs":{"Monarch":{"xref_id":"0011323"}}}


id: GO:0060690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquire specialized structural and/or functional features of an epithelial cell of the salivary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"is_a","term_name":"cell differentiation involved in salivary gland development","termid":"GO:0060689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in salivary gland development","termid":"GO:0060690"}


id: GO:0051346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrolase activity","synonyms":[{"name":"down regulation of hydrolase activity","type":"exact"},{"name":"down-regulation of hydrolase activity","type":"exact"},{"name":"downregulation of hydrolase activity","type":"exact"},{"name":"hydrolase inhibitor","type":"exact"},{"name":"inhibition of hydrolase activity","type":"narrow"}],"termid":"GO:0051346"}


id: PBO:0062313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily W member 1 pseudogene","termid":"PBO:0062313"}


id: GO:0035214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the eye-antennal imaginal disc over time, from its initial formation through to its metamorphosis to form adult structures including the eye, antenna, head capsule and maxillary palps.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye-antennal disc development","termid":"GO:0035214"}


id: PBO:0064688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 24","termid":"PBO:0064688"}


id: GO:0075133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont alters or subverts a calcium or calmodulin-mediated signal transduction in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated perturbation of host calcium or calmodulin-mediated signal transduction (obsolete GO:0075133)","synonyms":[{"name":"modulation by symbiont of host Ca++ or calmodulin-mediated signal transduction","type":"exact"},{"name":"perturbation of host calcium or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075133"}


id: PBO:0058949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marker of proliferation Ki-67 pseudogene 1","termid":"PBO:0058949"}


id: PBO:0074587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 3C","termid":"PBO:0074587"}


id: BFO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"[copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contains_process","termid":"BFO:0000067"}


id: MONDO:0007022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic, destructive infection of the kidney characterized by lipid-laden macrophages in the setting of obstruction secondary to infected renal stones, most commonly caused by Proteus or Escherichia coli.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic pyelonephritis","termid":"MONDO:0001110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"xanthogranulomatous pyelonephritis","secondary_identifiers":["EFO:1001244","MedDRA:10074389","DOID:11401","SCTID:38898003","MEDGEN:19591","MESH:D011705","NCIT:C123038","UMLS:C0034188","ICD9:582.89"],"synonyms":[{"name":"xanthogranulomatous pyelonephritis","type":"exact"}],"termid":"MONDO:0007022","xrefs":{"Monarch":{"xref_id":"0007022"}}}


id: GO:0048924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a posterior lateral line neuromast mantle cell. (N.B. This may be development of neuromast mantle cell type or a set of cells of neuromast mantle cell type. This will involve the change of a cell or set of cells from one cell identity to another). Mantle cells are non-sensory cells that surround the sensory strip, separating the neuromast from the epidermis. Mantle cells secrete the cupula in which the ciliary bundles of all of the hair cells are embedded.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast mantle cell differentiation","termid":"GO:0048888"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast development","termid":"GO:0048919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast mantle cell differentiation","termid":"GO:0048924"}


id: PBO:0083741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the MIND kinetochore complex; joins kinetochore subunits contacting DNA to those contacting microtubules; critical to kinetochore assembly; complex consists of Mtw1p Including Nnf1p-Nsl1p-Dsn1p (MIND)","termid":"PBO:0083741"}


id: MONDO:0003029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the skin.","definition_xrefs":["NCIT:C4489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin sarcoma","termid":"MONDO:0006414"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"skin angiosarcoma","secondary_identifiers":["MEDGEN:87535","SCTID:254794007","UMLS:C0346081","DOID:4517"],"synonyms":[{"name":"angiosarcoma (disease) of zone of skin","type":"exact"},{"name":"angiosarcoma of skin","type":"exact"},{"name":"angiosarcoma of the skin","type":"exact"},{"name":"hemangiosarcoma of skin","type":"exact"},{"name":"hemangiosarcoma of the skin","type":"exact"},{"name":"skin angiosarcoma","type":"exact"},{"name":"skin hemangiosarcoma","type":"exact"},{"name":"zone of skin angiosarcoma (disease)","type":"exact"}],"termid":"MONDO:0003029","xrefs":{"Monarch":{"xref_id":"0003029"}}}


id: MONDO:0008422
data:
  {"annotated_genes":["SJAG_01615"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85976],"is_not":false,"summary":null,"term":"MONDO:0008422"}]},"cv_name":"mondo","definition":"Autosomal dominant form of sideroblastic anemia.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"inherited sideroblastic anemia","termid":"MONDO:0020099"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01615":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"autosomal dominant sideroblastic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18380","OMIM:182170","MEDGEN:902781","DOID:0060335","MESH:C567160","UMLS:C4225428"],"synonyms":[{"name":"SIDBA4","type":"related"},{"name":"anemia, sideroblastic, 4","type":"related"},{"name":"anemia, sideroblastic, autosomal dominant","type":"related"},{"name":"sideroblastic anemia, autosomal dominant","type":"exact"}],"termid":"MONDO:0008422","terms_by_termid":{"MONDO:0008422":null},"xrefs":{"Monarch":{"xref_id":"0008422"}}}


id: FYPO:0003191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to microtubules does not occur, and the protein is instead visible in one or a few foci or dots in the cytoplasm, during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:18799626","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to microtubule during mitotic interphase, with protein mislocalized to cytoplasmic foci","synonyms":[{"name":"abolished protein localisation to microtubule during mitotic interphase, with protein mislocalised to cytoplasmic foci","type":"exact"},{"name":"protein localization to microtubule abolished during interphase, with protein mislocalized to cytoplasmic foci, during vegetative growth","type":"exact"},{"name":"protein localization to microtubule abolished during mitotic interphase, with protein mislocalized to cytoplasmic foci","type":"exact"}],"termid":"FYPO:0003191"}


id: MONDO:0007073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition that primarily affects the craniofacial region and the limbs (arms and legs). People affected by this condition are often born with a short, incompletely developed tongue; absent or partially missing fingers and/or toes; abnormalities of the arms and/or legs; and an extremely small jaw. The severity of these physical abnormalities varies greatly among affected people, and children with this condition often have some, but not all, of the symptoms. The cause of Hanhart syndrome is not fully understood. Treatment depends on the signs and symptoms present in each person.","definition_xrefs":["GARD:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"oromandibular-limb hypogenesis syndrome","termid":"MONDO:0017139"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Hypoglossia-hypodactyly syndrome","secondary_identifiers":["UMLS:C1863203","MEDGEN:354928","GARD:68","ICD9:759.89","SCTID:35031005","Orphanet:989","OMIM:103300","NORD:1215"],"synonyms":[{"name":"Hanhart Syndrome","type":"exact"},{"name":"Hanhart syndrome","type":"exact"},{"name":"Hypoglossia-hypodactylia","type":"related"},{"name":"Hypoglossia-hypodactylia syndrome","type":"related"},{"name":"Jussieu syndrome","type":"exact"},{"name":"aglossia adactylia","type":"related"},{"name":"aglossia-adactylia","type":"related"},{"name":"aglossia-adactylia syndrome","type":"exact"},{"name":"oromandibular limb hypoplasia","type":"related"},{"name":"peromelia with micrognathia","type":"related"},{"name":"peromelia with micrognathism","type":"related"}],"termid":"MONDO:0007073","xrefs":{"Monarch":{"xref_id":"0007073"}}}


id: PBO:0085149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleoside diphosphate kinase; catalyzes the transfer of gamma phosphates from nucleoside triphosphates, usually ATP, to nucleoside diphosphates by a mechanism that involves formation of an autophosphorylated enzyme intermediate; protein abundance increases in response to DNA replication stress","termid":"PBO:0085149"}


id: GO:0002095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex composed of proteins required for beta adrenergic receptor activation of protein kinase A. It includes the Cav 12. subunit of L-type calcium channel, protein kinase A regulatory subunit 2(PKAR2), adenyl cyclase, beta-adrenergic receptor, G-alpha-S, protein phosphatase 2A (PP2A) and caveolin 3 (CAV3).","definition_xrefs":["PMID:16648270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"caveola","termid":"GO:0005901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"caveolar macromolecular signaling complex","synonyms":[{"name":"caveolar macromolecular signalling complex","type":"exact"}],"termid":"GO:0002095"}


id: FYPO:0006814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"},{"relation_name":"is_a","term_name":"increased histone H3 acetylation at centromere outer repeat during vegetative growth","termid":"FYPO:0002381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3-K9 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K9 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3-K9 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006814"}


id: PBO:0116828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1761 transmembrane protein family, implicated in phosphate metabolism, stress response, sporulation","termid":"PBO:0116828"}


id: MONDO:0004546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the lumbar nerve plexus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumbosacral plexus lesion","termid":"MONDO:0001829"},{"relation_name":"is_a","term_name":"nerve plexus neoplasm","termid":"MONDO:0003100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"lumbar plexus neoplasm","secondary_identifiers":["MEDGEN:272802","DOID:8389","NCIT:C5824","UMLS:C1334437"],"synonyms":[{"name":"lumbar nerve plexus neoplasm","type":"exact"},{"name":"lumbar nerve plexus neoplasm (disease)","type":"exact"},{"name":"lumbar nerve plexus tumor","type":"exact"},{"name":"lumbar nerve plexus tumour","type":"exact"},{"name":"lumbar plexus neoplasms","type":"exact"},{"name":"lumbar plexus tumor","type":"exact"},{"name":"lumbar plexus tumour","type":"exact"},{"name":"neoplasm of lumbar nerve plexus","type":"exact"},{"name":"neoplasm of lumbar plexus","type":"exact"},{"name":"neoplasm of the lumbar plexus","type":"exact"},{"name":"tumor of lumbar nerve plexus","type":"exact"},{"name":"tumor of lumbar plexus","type":"exact"},{"name":"tumor of the lumbar plexus","type":"exact"},{"name":"tumour of lumbar nerve plexus","type":"exact"},{"name":"tumour of lumbar plexus","type":"exact"},{"name":"tumour of the lumbar plexus","type":"exact"}],"termid":"MONDO:0004546","xrefs":{"Monarch":{"xref_id":"0004546"}}}


id: FYPO:0002845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is swollen, is elongated, and contains one or more septa. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable swollen elongated vegetative cell","termid":"FYPO:0002251"},{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"inviable swollen elongated septated vegetative cell","synonyms":[{"name":"inviable enlarged elongated septated vegetative cell with enlarged nucleus","type":"related"},{"name":"inviable large elongated septated vegetative cell","type":"related"},{"name":"lethal; swollen elongated septated vegetative cell","type":"exact"}],"termid":"FYPO:0002845"}


id: MONDO:0016095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm with skeletal muscle differentiation arising from the vagina.","definition_xrefs":["NCIT:C128080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vagina sarcoma","termid":"MONDO:0002140"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal rhabdomyosarcoma","secondary_identifiers":["Orphanet:206492","MEDGEN:925567","UMLS:C4288035","SCTID:766759009","GARD:20348"],"synonyms":[{"name":"rhabdomyosarcoma (disease) of vagina","type":"exact"},{"name":"vagina rhabdomyosarcoma","type":"exact"},{"name":"vagina rhabdomyosarcoma (disease)","type":"exact"},{"name":"vaginal rhabdomyosarcoma","type":"exact"},{"name":"vulvovaginal rhabdomyosarcoma","type":"related"}],"termid":"MONDO:0016095","xrefs":{"Monarch":{"xref_id":"0016095"}}}


id: MONDO:0013599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune enteropathy and endocrinopathy-susceptibility to chronic infections syndrome is an extremely rare, autosomal dominant immunological disorder characterized by variable enteropathy, endocrine disorders (e.g. type 1 diabetes mellitus, hypothyroidism), immune dysregulation with pulmonary and blood-borne bacterial infections, and fungal infections (chronic mucocutaneous candidiasis) developing in infancy. Other manifestations include short stature, eczema, hepatosplenomegaly, delayed puberty, and osteoporosis/osteopenia.","definition_xrefs":["Orphanet:391487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"polyendocrinopathy","termid":"MONDO:0015126"},{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"},{"relation_name":"is_a","term_name":"autoimmune enteropathy","termid":"MONDO:0019787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune enteropathy and endocrinopathy - susceptibility to chronic infections syndrome","secondary_identifiers":["DOID:0111946","GARD:12314","OMIM:614162","MEDGEN:481620","UMLS:C3279990"],"synonyms":[{"name":"CANDF7","type":"related"},{"name":"IMD31C","type":"related"},{"name":"candidiasis familial chronic mucocutaneous, autosomal dominant","type":"related"},{"name":"candidiasis familial, 7","type":"related"},{"name":"candidiasis, familial chronic mucocutaneous, autosomal dominant","type":"related"},{"name":"candidiasis, familial, 7","type":"related"},{"name":"familial chronic mucocutaneous, autosomal dominant","type":"related"},{"name":"immunodeficiency 31C","type":"related"},{"name":"immunodeficiency 31C, chronic mucocutaneous candidiasis, autosomal dominant","type":"exact"},{"name":"immunodeficiency type 31C","type":"exact"}],"termid":"MONDO:0013599","xrefs":{"Monarch":{"xref_id":"0013599"}}}


id: GO:0015126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The directed movement of bile acid and bile salts out of a hepatocyte and into the bile canaliculus by means of an agent such as a transporter or pore. Bile canaliculi are the thin tubes formed by hepatocyte membranes. Bile acids are any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid transmembrane transporter activity","termid":"GO:0015125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"canalicular bile acid transmembrane transporter activity","termid":"GO:0015126"}


id: MONDO:0023038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eccentrochondrodysplasia (obsolete MONDO:0023038)","termid":"MONDO:0023038","xrefs":{"Monarch":{"xref_id":"0023038"}}}


id: PBO:0066993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 296","termid":"PBO:0066993"}


id: MONDO:0002947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"adamantinoid basal cell epithelioma","secondary_identifiers":["NCIT:C7585","MEDGEN:227004","DOID:4290","SCTID:402524007","UMLS:C1304295"],"synonyms":[{"name":"adamantinoid basal cell carcinoma","type":"exact"},{"name":"basal cell carcinoma - adamantinoid","type":"exact"},{"name":"melanotic adamantinoma of skin","type":"exact"},{"name":"skin adamantinoid basal cell carcinoma","type":"exact"},{"name":"skin adamantinoid basal cell epithelioma","type":"exact"}],"termid":"MONDO:0002947","xrefs":{"Monarch":{"xref_id":"0002947"}}}


id: GO:0032811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of epinephrine.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epinephrine secretion","termid":"GO:0014060"},{"relation_name":"is_a","term_name":"negative regulation of catecholamine secretion","termid":"GO:0033604"},{"relation_name":"negatively_regulates","term_name":"epinephrine secretion","termid":"GO:0048242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of epinephrine secretion","synonyms":[{"name":"down regulation of epinephrine secretion","type":"exact"},{"name":"down-regulation of epinephrine secretion","type":"exact"},{"name":"downregulation of epinephrine secretion","type":"exact"},{"name":"inhibition of epinephrine secretion","type":"narrow"},{"name":"negative regulation of adrenaline secretion","type":"exact"}],"termid":"GO:0032811"}


id: PBO:0062318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 3","termid":"PBO:0062318"}


id: FYPO:0003003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to centromere during vegetative growth","termid":"FYPO:0000451"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during vegetative growth","termid":"FYPO:0001268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to kinetochore during vegetative growth","synonyms":[{"name":"increased protein localisation to kinetochore during vegetative growth","type":"exact"},{"name":"increased protein localization to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003003"}


id: MONDO:0003982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carcinoma that affects both breasts in a simultaneous or non-simultaneous manner.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bilateral breast carcinoma","secondary_identifiers":["MEDGEN:128977","NCIT:C8287","DOID:6741","UMLS:C0281267"],"synonyms":[{"name":"bilateral breast cancer","type":"broad"},{"name":"bilateral breast carcinoma","type":"exact"}],"termid":"MONDO:0003982","xrefs":{"Monarch":{"xref_id":"0003982"}}}


id: PBO:0047891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(6)(q26)","termid":"PBO:0047891"}


id: GO:0062166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of pseudohyphal septin ring assembly.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of pseudohyphal septin ring assembly","termid":"GO:0062164"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"pseudohyphal septin ring assembly","termid":"GO:0062163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of pseudohyphal septin ring assembly","termid":"GO:0062166"}


id: PBO:0050554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemopexin","termid":"PBO:0050554"}


id: PBO:0057114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 200c","termid":"PBO:0057114"}


id: FYPO:0005298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of oxidized DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000653"],"is_obsolete":false,"name":"normal oxidized DNA binding","termid":"FYPO:0005298"}


id: PR:Q9UT18
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thi9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine transporter thi9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.10","synonyms":[{"name":"Spom972h-thi9","type":"exact"}],"termid":"PR:Q9UT18"}


id: PBO:0069967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1262, pseudogene","termid":"PBO:0069967"}


id: GO:1990497
data:
  {"annotated_genes":["SJAG_00786","SJAG_02592","SJAG_01942","SJAG_00690","SJAG_04383","SJAG_04873","SJAG_03869","SJAG_02072","SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115918,75585,94705,99658,109979,70305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[104277,95560,103643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"}]},"cv_name":"biological_process","definition":"Modulation of the frequency, rate or extent of cytoplasmic translation as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["PMID:16278445","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translation","termid":"GO:2000765"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02072":null,"SJAG_02592":null,"SJAG_03869":null,"SJAG_04383":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0002181","GO:0010467"],"is_obsolete":false,"name":"regulation of cytoplasmic translation in response to stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990497","terms_by_termid":{"GO:1990611":null,"GO:1990625":null}}


id: MOD:00489
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:117#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized arginine biotinylated with biotin-LC-hydrazide, reduced","synonyms":[{"name":"OxArgBiotinRed","type":"related"},{"name":"Oxidized arginine biotinylated with biotin-LC-hydrazide, reduced","type":"related"}],"termid":"MOD:00489"}


id: PBO:0000319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-ribosomal protein Loc1 (predicted)","termid":"PBO:0000319"}


id: GO:0001778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress.","definition_xrefs":["PMID:12925704","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plasma membrane repair","termid":"GO:0001778"}


id: FYPO:0004260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to the region of a chromosome at which a DNA double-strand break has occurred for longer than normal.","definition_xrefs":["PomBase:mah","PMID:21098122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to double-strand break site","termid":"FYPO:0002473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of protein localization to double-strand break site","synonyms":[{"name":"increased duration of protein localisation to double-strand break site","type":"exact"},{"name":"increased duration of protein localization to DSB site","type":"exact"},{"name":"increased duration of protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to site of double-strand break","type":"exact"},{"name":"prolonged protein localization to double-strand break site","type":"exact"}],"termid":"FYPO:0004260"}


id: MONDO:0044762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diarrhea that results from increased motility in the bowel; significant increases in bowel motility can deliver excessively large volumes of stool to the colon. Diarrhea can result when the maximum colonic absorptive capacity of 4 liters a day is exceeded. Also, an alteration in colonic motility such that bowel contents are emptied before adequate absorption can occur has been offered as a possible explanation for the diarrhea associated with irritable bowel disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"diarrheal disease secondary to altered bowel motility","termid":"MONDO:0000251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrheal disease secondary to increased bowel motility","secondary_identifiers":["DOID:0050131"],"synonyms":[{"name":"diarrhea from increased bowel motility","type":"exact"},{"name":"diarrhoea from increased bowel motility","type":"exact"},{"name":"motility-related diarrhea","type":"broad"},{"name":"motility-related diarrhoea","type":"broad"}],"termid":"MONDO:0044762","xrefs":{"Monarch":{"xref_id":"0044762"}}}


id: PBO:0028944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutathione_synthase_activity","termid":"PBO:0028944"}


id: PBO:0087720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; conserved from yeast to human; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; required for transcriptional activation and has a role in basal transcription; protein abundance increases in response to DNA replication stress","termid":"PBO:0087720"}


id: PBO:0068145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 452","termid":"PBO:0068145"}


id: PBO:0062301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 12 pseudogene","termid":"PBO:0062301"}


id: PBO:0067981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 283","termid":"PBO:0067981"}


id: GO:0006779
data:
  {"annotated_genes":["SJAG_00097","SJAG_01372","SJAG_00699","SJAG_03862","SJAG_04109","SJAG_04397","SJAG_04944","SJAG_01786","SJAG_02896","SJAG_03173","SJAG_01192","SJAG_01841","SJAG_05283","SJAG_02876","SJAG_04515","SJAG_01155","SJAG_03961"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80403,78714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[114179,101409,112183,105512,74700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[57224,63148,67756,60268,64832,59191,63010,80273],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006782"},{"annotations":[71735,77145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"},{"annotations":[75132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.","definition_xrefs":["ISBN:0198506732","GOC:jl","Wikipedia:Porphyrin#Natural_formation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00699":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04515":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"porphyrin-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"porphyrin anabolism","type":"related"},{"name":"porphyrin biosynthesis","type":"related"},{"name":"porphyrin biosynthetic process","type":"related"},{"name":"porphyrin formation","type":"related"},{"name":"porphyrin synthesis","type":"related"}],"termid":"GO:0006779","terms_by_termid":{"GO:0006780":null,"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null}}


id: PBO:0112922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation wall assembly GPI anchored protein, Meu10","termid":"PBO:0112922"}


id: FYPO:0001843
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to rhizoxin. Cells stop growing (and may die) at a concentration of rhizoxin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to rhizoxin","synonyms":[{"name":"hypersensitive to rhizoxin","type":"exact"},{"name":"sensitive to rhizoxin during mitotic cell cycle","type":"related"},{"name":"sensitive to rhizoxin during vegetative growth","type":"exact"}],"termid":"FYPO:0001843"}


id: PBO:0030973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation","termid":"PBO:0030973"}


id: PR:O94627
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1347.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 subunit B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.08c","synonyms":[{"name":"RNase H(202) (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNase H2 subunit B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Rnh2B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC1347.08c","type":"exact"},{"name":"ribonuclease HI subunit B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94627"}


id: GO:1990913
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The plasma membrane that is part of the head section of a sperm cell.","definition_xrefs":["PMID:24478030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"sperm head","termid":"GO:0061827"},{"relation_name":"part_of","term_name":"sperm plasma membrane","termid":"GO:0097524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"sperm head plasma membrane","termid":"GO:1990913"}


id: PBO:0064284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing O1","termid":"PBO:0064284"}


id: PBO:0056746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 2B, methylcytidine","termid":"PBO:0056746"}


id: MONDO:0020189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eyebrow/eyelashes structural anomaly (obsolete MONDO:0020189)","secondary_identifiers":["Orphanet:98599"],"termid":"MONDO:0020189","xrefs":{"Monarch":{"xref_id":"0020189"}}}


id: MONDO:0019215
data:
  {"annotated_genes":["SJAG_00737","SJAG_00944","SJAG_00413","SJAG_00947","SJAG_02641","SJAG_01199","SJAG_01597","SJAG_03258","SJAG_03560","SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009603"},{"annotations":[87275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009787"},{"annotations":[85702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012435"},{"annotations":[87352,87351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044723"},{"annotations":[85641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044724"},{"annotations":[87370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008760"},{"annotations":[86011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013661"},{"annotations":[86631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[87031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn organic aciduria","termid":"MONDO:0000688"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00737":null,"SJAG_00944":null,"SJAG_00947":null,"SJAG_01199":null,"SJAG_01597":null,"SJAG_02641":null,"SJAG_03069":null,"SJAG_03258":null,"SJAG_03560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"classic organic aciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79163","UMLS:C5681291","MEDGEN:1842457","GARD:18947","icd11.foundation:1879509617"],"termid":"MONDO:0019215","terms_by_termid":{"MONDO:0008760":null,"MONDO:0009603":null,"MONDO:0009666":null,"MONDO:0009787":null,"MONDO:0010184":null,"MONDO:0012435":null,"MONDO:0013661":null,"MONDO:0044723":null,"MONDO:0044724":null},"xrefs":{"Monarch":{"xref_id":"0019215"}}}


id: GO:1900076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to insulin stimulus.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to insulin stimulus","termid":"GO:1900076"}


id: PBO:0109350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem-loop histone mRNA binding protein","termid":"PBO:0109350"}


id: PBO:0028729
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynylcysteine_sulfoxide_level","termid":"PBO:0028729"}


id: GO:1901262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sorocarp spore cell differentiation.","definition_xrefs":["GOC:rjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of sorocarp spore cell differentiation","termid":"GO:1901261"},{"relation_name":"negatively_regulates","term_name":"sorocarp spore cell differentiation","termid":"GO:0044671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sorocarp spore cell differentiation","synonyms":[{"name":"down regulation of sorocarp spore cell differentiation","type":"exact"},{"name":"down-regulation of sorocarp spore cell differentiation","type":"exact"},{"name":"downregulation of sorocarp spore cell differentiation","type":"exact"},{"name":"inhibition of sorocarp spore cell differentiation","type":"narrow"}],"termid":"GO:1901262"}


id: PR:O94690
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC83.06c gene.","definition_xrefs":["UniProtKB:O94690","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein c83.06c, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.06c","synonyms":[{"name":"Spom972h-SPBC83.06c","type":"exact"}],"termid":"PR:O94690"}


id: PBO:0051372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-31 (pseudogene)","termid":"PBO:0051372"}


id: GO:2000485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamine transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"regulates","term_name":"glutamine transport","termid":"GO:0006868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of glutamine transport","synonyms":[{"name":"regulation of L-glutamine transport","type":"related"}],"termid":"GO:2000485"}


id: PBO:0054137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1503","termid":"PBO:0054137"}


id: MONDO:0015541
data:
  {"annotated_genes":["SJAG_02572","SJAG_01697","SJAG_02453","SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012146"},{"annotations":[86029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011336"},{"annotations":[86975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013135"},{"annotations":[86333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"}]},"cv_name":"mondo","definition":"An instance of hemophagocytic lymphohistiocytosis that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"hemophagocytic syndrome","termid":"MONDO:0015540"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01697":null,"SJAG_02453":null,"SJAG_02572":null,"SJAG_03536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hereditary hemophagocytic lymphohistiocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:267700","MedDRA:10070904","UMLS:C0272199","SCTID:398250003","MEDGEN:78797","Orphanet:540","GARD:6589","ICD9:238.79"],"synonyms":[{"name":"familial hemophagocytic lymphohistiocytosis","type":"exact"},{"name":"genetic hemophagocytic lymphohistiocytosis","type":"exact"},{"name":"genetic hemophagocytic syndrome","type":"exact"},{"name":"primary hemophagocytic lymphohistiocytosis","type":"exact"}],"termid":"MONDO:0015541","terms_by_termid":{"MONDO:0011336":null,"MONDO:0011997":null,"MONDO:0012146":null,"MONDO:0013135":null},"xrefs":{"Monarch":{"xref_id":"0015541"}}}


id: PBO:0005276
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.2.1.2","termid":"PBO:0005276"}


id: MONDO:0014822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"15q14 microdeletion syndrome is a recently described syndrome characterized by developmental delay, short stature and facial dysmorphism.","definition_xrefs":["Orphanet:261190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 15","termid":"MONDO:0016913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15q14 microdeletion syndrome","secondary_identifiers":["GARD:17242","SCTID:719575008","MEDGEN:930899","OMIM:616898","UMLS:C4305230"],"synonyms":[{"name":"Del(15)(q14)","type":"exact"},{"name":"chromosome 15q14 deletion syndrome","type":"related"},{"name":"monosomy 15q14","type":"exact"}],"termid":"MONDO:0014822","xrefs":{"Monarch":{"xref_id":"0014822"}}}


id: GO:0044546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the NLRP3 inflammasome complex, occurring at the level of an individual cell.","definition_xrefs":["PMID:21048113","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex assembly","termid":"GO:0140632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"NLRP3 inflammasome complex assembly","synonyms":[{"name":"NALP3 inflammasome complex assembly","type":"exact"},{"name":"NLRP3 inflammasome activation","type":"related"}],"termid":"GO:0044546"}


id: FYPO:0000814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleolus organization is abnormal. Nucleolus organization results in the assembly, arrangement of constituent parts, or disassembly of the nucleolus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleus organization","termid":"FYPO:0000810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nucleolus organization","synonyms":[{"name":"abnormal nucleolus organisation","type":"exact"},{"name":"abnormal nucleolus organization during mitotic cell cycle","type":"related"},{"name":"abnormal nucleolus organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000814"}


id: FYPO:0004545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of proteasome-mediated, ubiquitin-dependent protein degradation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"},{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased proteasomal ubiquitin-dependent protein degradation","synonyms":[{"name":"decreased proteasomal ubiquitin-dependent protein breakdown","type":"exact"},{"name":"decreased proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"decreased proteasomal ubiquitin-dependent protein catabolism","type":"exact"},{"name":"decreased proteasomal ubiquitin-dependent protein degradation during mitotic cell cycle","type":"related"},{"name":"decreased proteasomal ubiquitin-dependent protein degradation during vegetative growth","type":"exact"},{"name":"decreased proteasome-mediated ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"reduced proteasomal ubiquitin-dependent protein degradation","type":"exact"}],"termid":"FYPO:0004545"}


id: MONDO:0012070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant Charcot-Marie-Tooth disease type 2G (obsolete MONDO:0012070)","termid":"MONDO:0012070","xrefs":{"Monarch":{"xref_id":"0012070"}}}


id: PBO:0075244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 14","termid":"PBO:0075244"}


id: MONDO:0015156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete typhus-group rickettsiosis (obsolete MONDO:0015156)","termid":"MONDO:0015156","xrefs":{"Monarch":{"xref_id":"0015156"}}}


id: MONDO:0002110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, testicular or ovarian tumor, derived from adrenal embryonic rest cells. It is composed of hyperplastic adrenal cortical tissue, and it is associated with congenital adrenal hyperplasia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"benign reproductive system neoplasm","termid":"MONDO:0000383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenal rest tumor","secondary_identifiers":["DOID:1786","UMLS:C0001630","MEDGEN:7902","MESH:D000314","NCIT:C2860","ICDO:8671/0"],"synonyms":[{"name":"adrenal rest neoplasm","type":"exact"},{"name":"adrenal rest tumor","type":"exact"}],"termid":"MONDO:0002110","xrefs":{"Monarch":{"xref_id":"0002110"}}}


id: PBO:0043222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride channel accessory 1","termid":"PBO:0043222"}


id: PBO:0042023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 81","termid":"PBO:0042023"}


id: GO:0006823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of heavy metal ions into, out of or within a cell, or between cells. Heavy metals are those that can form a coordination bond with a protein, as opposed to an alkali or alkaline-earth metal that can only form an ionic bond; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:mah","GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal ion transport (obsolete GO:0006823)","synonyms":[{"name":"heavy metal ion transport","type":"exact"}],"termid":"GO:0006823"}


id: PBO:0001098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-copy suppressor of Chk1","termid":"PBO:0001098"}


id: PBO:0067908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 210","termid":"PBO:0067908"}


id: PBO:0066689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of MON1-CCZ1","termid":"PBO:0066689"}


id: MONDO:0013013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"auriculocondylar syndrome","termid":"MONDO:0000107"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"question mark ears, isolated","secondary_identifiers":["MEDGEN:411238","UMLS:C2748545","GARD:15583","OMIM:612798"],"synonyms":[{"name":"Cosman deformity of the auricle","type":"related"},{"name":"QME","type":"related"},{"name":"auricular cleft, congenital","type":"related"},{"name":"ears, prominent and constricted","type":"related"},{"name":"question MARK ears, isolated","type":"related"},{"name":"question mark ears, isolated","type":"exact"}],"termid":"MONDO:0013013","xrefs":{"Monarch":{"xref_id":"0013013"}}}


id: MONDO:0000278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Bolivian hemorrhagic fever (obsolete MONDO:0000278)","termid":"MONDO:0000278","xrefs":{"Monarch":{"xref_id":"0000278"}}}


id: PBO:0077898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrapeptide repeat homeobox like (pseudogene)","termid":"PBO:0077898"}


id: PATO:0002279
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being strongly articulated with another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"articulated with","termid":"PATO:0002278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tightly articulated with","termid":"PATO:0002279"}


id: PBO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS complex subunit Vps41 (predicted)","termid":"PBO:0001073"}


id: FYPO:0004058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination at a CRE promoter in a chromosome is decreased.","definition_xrefs":["PMID:19436749","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000293"],"is_obsolete":false,"name":"decreased meiotic recombination at CRE promoter","synonyms":[{"name":"decreased meiotic recombination at M26 site","type":"exact"},{"name":"reduced meiotic recombination at CRE promoter","type":"exact"}],"termid":"FYPO:0004058"}


id: MONDO:0032912
data:
  {"annotated_genes":["SJAG_00739"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87054],"is_not":false,"summary":null,"term":"MONDO:0032912"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00739":null},"genotype_count":0,"is_obsolete":false,"name":"Coffin-Siris syndrome 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112372","GARD:16379","MEDGEN:1717402","UMLS:C5241442","OMIM:618779"],"synonyms":[{"name":"COFFIN-SIRIS SYNDROME 11","type":"related"},{"name":"CSS11","type":"related"}],"termid":"MONDO:0032912","terms_by_termid":{"MONDO:0032912":null},"xrefs":{"Monarch":{"xref_id":"0032912"}}}


id: GO:0090257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a muscle system process, a multicellular organismal process carried out by any of the organs or tissues in a muscle system.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"muscle system process","termid":"GO:0003012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle system process","termid":"GO:0090257"}


id: PBO:0079622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 M","termid":"PBO:0079622"}


id: MONDO:0000261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disease involving a pathogenic inflammatory response in the pharyngeal tonsil.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonsillitis","termid":"MONDO:0001039"},{"relation_name":"is_a","term_name":"nasopharyngitis","termid":"MONDO:0001040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"adenoiditis","secondary_identifiers":["MEDGEN:507401","SCTID:70020005","UMLS:C0001427","DOID:0050145","ICD10CM:J35.02","ICD9:474.01"],"synonyms":[{"name":"chronic adenoiditis","type":"narrow"},{"name":"inflammation of pharyngeal tonsil","type":"exact"},{"name":"pharyngeal tonsil inflammation","type":"exact"},{"name":"pharyngeal tonsilitis","type":"exact"}],"termid":"MONDO:0000261","xrefs":{"Monarch":{"xref_id":"0000261"}}}


id: PBO:0064760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase D","termid":"PBO:0064760"}


id: PBO:0063246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 11","termid":"PBO:0063246"}


id: GO:0002896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of central B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of central tolerance induction","termid":"GO:0002647"},{"relation_name":"is_a","term_name":"negative regulation of B cell tolerance induction","termid":"GO:0002662"},{"relation_name":"is_a","term_name":"regulation of central B cell tolerance induction","termid":"GO:0002895"},{"relation_name":"negatively_regulates","term_name":"central B cell tolerance induction","termid":"GO:0002510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of central B cell tolerance induction","synonyms":[{"name":"down regulation of central B cell tolerance induction","type":"exact"},{"name":"down-regulation of central B cell tolerance induction","type":"exact"},{"name":"downregulation of central B cell tolerance induction","type":"exact"},{"name":"inhibition of central B cell tolerance induction","type":"narrow"}],"termid":"GO:0002896"}


id: GO:0033334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a fin are generated and organized.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage morphogenesis","termid":"GO:0035107"},{"relation_name":"part_of","term_name":"fin development","termid":"GO:0033333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fin morphogenesis","termid":"GO:0033334"}


id: GO:0046525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + O-beta-D-xylosylprotein = UDP + 4-beta-D-galactosyl-O-beta-D-xylosylprotein.","definition_xrefs":["EC:2.4.1.133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0140096","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"xylosylprotein 4-beta-galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-3560804","Reactome:R-HSA-1889981","RHEA:15297","MetaCyc:2.4.1.133-RXN"],"synonyms":[{"name":"UDP-D-galactose:D-xylose galactosyltransferase activity","type":"related"},{"name":"UDP-D-galactose:xylose galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:O-beta-D-xylosylprotein 4-beta-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:xylose galactosyltransferase activity","type":"exact"},{"name":"UDPgalactose:O-beta-D-xylosylprotein 4-beta-D-galactosyltransferase activity","type":"related"},{"name":"galactosyltransferase I activity","type":"related"},{"name":"uridine diphosphogalactose-xylose galactosyltransferase activity","type":"related"}],"termid":"GO:0046525"}


id: PBO:0054290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1681","termid":"PBO:0054290"}


id: MONDO:0017410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Porencephaly is characterized by a circumscribed intracerebral cavity of variable size that may be bordered by abnormal polymicrogyric gray matter. In extreme cases, this cavity may result in a communication between the pial surface and the ventricle; this is termed schizencephaly.","definition_xrefs":["Orphanet:2940"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete cerebral malformation with epilepsy (obsolete MONDO:0015655)","termid":"MONDO:0015655"},{"relation_name":"is_a","term_name":"encephaloclastic disorder","termid":"MONDO:0017103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porencephaly","secondary_identifiers":["icd11.foundation:137059367","HP:0002132","MESH:D065708","GARD:7430","DOID:0060263","MedDRA:10036172","UMLS:C4082173","MEDGEN:901502","NANDO:1201074"],"termid":"MONDO:0017410","xrefs":{"Monarch":{"xref_id":"0017410"}}}


id: FYPO:0007502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is decreased during prophase of the first meiotic nuclear division.","definition_xrefs":["PMID:16111942","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body during meiosis I","termid":"FYPO:0007482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000631"],"is_obsolete":false,"name":"decreased protein localization to meiotic spindle pole body during prophase I","synonyms":[{"name":"decreased protein localisation to meiotic spindle pole body during prophase I","type":"exact"},{"name":"decreased protein localization to meiotic SPB during prophase I","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during meiotic prophase I","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during prophase of first meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during prophase I","type":"exact"},{"name":"reduced protein localization to meiotic spindle pole body during prophase I","type":"exact"}],"termid":"FYPO:0007502"}


id: GO:0090145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial nucleoid that contributes to mitochondrial division.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial nucleoid organization involved in mitochondrial fission (obsolete GO:0090145)","synonyms":[{"name":"mitochondrial nucleoid organisation involved in mitochondrial fission","type":"exact"}],"termid":"GO:0090145"}


id: GO:0032261
data:
  {"annotated_genes":["SJAG_01859","SJAG_06634","SJAG_01070","SJAG_04123","SJAG_03298","SJAG_01500"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74295,57088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[75995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[75996,65070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[80285,99666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[75997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"Any process which produces a purine nucleotide from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"purine-containing compound salvage","termid":"GO:0043101"},{"relation_name":"is_a","term_name":"nucleotide salvage","termid":"GO:0043173"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01070":null,"SJAG_01500":null,"SJAG_01859":null,"SJAG_03298":null,"SJAG_04123":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleotide salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"termid":"GO:0032261","terms_by_termid":{"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0034355":null,"GO:0044209":null}}


id: FYPO:0003241
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation fails to separate chromosomes into two equal masses. Unequal mitotic sister chromatid separation may be complete, with two distinct unequal DNA masses located at or near the ends of an elongated mitotic spindle, or incomplete.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"altered DNA level during vegetative growth","termid":"FYPO:0004321"},{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0000337","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"unequal mitotic sister chromatid segregation","synonyms":[{"name":"chromosome missegregation","type":"exact"},{"name":"mitotic chromosome nondisjunction","type":"exact"},{"name":"unequal mitotic chromosome segregation","type":"exact"},{"name":"unequal mitotic sister chromatid segregation during vegetative growth","type":"exact"},{"name":"unequal mitotic sister chromatid separation","type":"related"},{"name":"unequal sister chromatid segregation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003241"}


id: GO:0002521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized hemopoietic precursor cell acquires the specialized features of a leukocyte. A leukocyte is an achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue.","definition_xrefs":["CL:0000738","GOC:add","PMID:16551264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte differentiation","synonyms":[{"name":"immune cell differentiation","type":"exact"},{"name":"leucocyte differentiation","type":"exact"}],"termid":"GO:0002521"}


id: GO:0085013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a type VII secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type VII secretion system (obsolete GO:0085013)","termid":"GO:0085013"}


id: PBO:0048167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fizzy and cell division cycle 20 related 1","termid":"PBO:0048167"}


id: GO:0047915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-1,4-beta-D-glucosyl-N-acylsphingosine = UDP + D-galactosyl-1,3-beta-N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosyl-N-acylsphingosine.","definition_xrefs":["MetaCyc:GANGLIOSIDE-GALACTOSYLTRANSFERASE-RXN","EC:2.4.1.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"ganglioside galactosyltransferase activity","secondary_identifiers":["RHEA:16773"],"synonyms":[{"name":"GM1-synthase activity","type":"related"},{"name":"UDP galactose-LAC Tet-ceramide alpha-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-GM2 galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-GM2 ganglioside galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosyl-N-acylsphingosine beta-1,3-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acetylgalactosaminyl-(N-acetylneuraminyl) galactosyl-glucosyl-ceramide galactosyltransferase activity","type":"related"},{"name":"UDPgalactose-ceramide galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosyl-N-acylsphingosine beta-1,3-D-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphate D-galactose:glycolipid galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-GM2 galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-ceramide galactosyltransferase activity","type":"related"}],"termid":"GO:0047915"}


id: GO:0051345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hydrolase activity, the catalysis of the hydrolysis of various bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrolase activity","synonyms":[{"name":"activation of hydrolase activity","type":"narrow"},{"name":"hydrolase activator","type":"exact"},{"name":"stimulation of hydrolase activity","type":"narrow"},{"name":"up regulation of hydrolase activity","type":"exact"},{"name":"up-regulation of hydrolase activity","type":"exact"},{"name":"upregulation of hydrolase activity","type":"exact"}],"termid":"GO:0051345"}


id: PBO:0038907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E2","termid":"PBO:0038907"}


id: FYPO:0006178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin cortical patch localization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:11231572","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cortical patch localization","termid":"FYPO:0001294"},{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal rate of actin cortical patch localization","synonyms":[{"name":"normal rate of actin cortical patch localisation","type":"exact"},{"name":"normal rate of actin cortical patch localization during mitotic cell cycle","type":"related"},{"name":"normal rate of actin cortical patch localization during vegetative growth","type":"exact"},{"name":"normal rate of actin patch localization","type":"exact"}],"termid":"FYPO:0006178"}


id: MONDO:0013177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital muscular dystrophy with integrin alpha-7 deficiency is a rare, genetic, congenital muscular dystrophy due to extracellular matrix protein anomaly characterized by early motor development delay and muscle weakness with mild elevation of serum creatine kinase, that may be followed by progressive disease course with predominantly proximal muscle weakness and atrophy, motor development regress, scoliosis and respiratory insufficiency.","definition_xrefs":["Orphanet:34520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital muscular dystrophy due to integrin alpha-7 deficiency","secondary_identifiers":["DOID:0110639","MEDGEN:413044","GARD:12587","UMLS:C2750786","OMIM:613204","MESH:C567709"],"synonyms":[{"name":"ITGA7 congenital muscular dystrophy","type":"exact"},{"name":"congenital muscular dystrophy caused by mutation in ITGA7","type":"exact"},{"name":"congenital muscular dystrophy with ITGA7 deficiency","type":"exact"},{"name":"congenital muscular dystrophy with integrin alpha-7 deficiency","type":"exact"},{"name":"congenital myopathy due to integrin alpha-7 deficiency","type":"exact"},{"name":"muscular dystrophy, congenital, due to ITGA7 deficiency","type":"related"},{"name":"muscular dystrophy, congenital, due to integrin ALPHA-7 deficiency","type":"related"},{"name":"myopathy, congenital, due to integrin Alpha-7 deficiency","type":"related"}],"termid":"MONDO:0013177","xrefs":{"Monarch":{"xref_id":"0013177"}}}


id: MONDO:0016783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies due to 14q32.2 maternally expressed gene defect","termid":"MONDO:0016779"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal 14q32.2 hypermethylation syndrome","secondary_identifiers":["UMLS:C5680720","GARD:17223","MEDGEN:1843365","Orphanet:254534"],"termid":"MONDO:0016783","xrefs":{"Monarch":{"xref_id":"0016783"}}}


id: GO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process in which immunoglobulin genes are diversified through the mechanism of gene conversion.","definition_xrefs":["GOC:add","PMID:14991701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via gene conversion","termid":"GO:0002565"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins","termid":"GO:0016445"},{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"gene conversion of immunoglobulin genes","synonyms":[{"name":"gene conversion of antibody genes","type":"exact"}],"termid":"GO:0002206"}


id: MONDO:1011678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypothyroidism, non-human animal","secondary_identifiers":["OMIA:000538"],"termid":"MONDO:1011678","xrefs":{"Monarch":{"xref_id":"1011678"}}}


id: MONDO:1012030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bleeding disorder, non-human animal","termid":"MONDO:1011685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleeding disorder, cattle","secondary_identifiers":["OMIA:000113-9913","OMIA:000112-9913"],"synonyms":[{"name":"bleeding diathesis, cattle","type":"exact"}],"termid":"MONDO:1012030","xrefs":{"Monarch":{"xref_id":"1012030"}}}


id: PBO:0080620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 59","termid":"PBO:0080620"}


id: MONDO:0009028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare syndrome characterized by poorly mineralized calvarium, facial dysmorphism, vertebral abnormalities and absent clavicles.","definition_xrefs":["Orphanet:1512"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crane-Heise syndrome","secondary_identifiers":["MEDGEN:387847","OMIM:218090","MESH:C536452","SCTID:715991005","UMLS:C1857532","GARD:8428"],"synonyms":[{"name":"Crane-Heise syndrome","type":"exact"},{"name":"cleft Lip/palate, agenesis of clavicles and cervical vertebrae, and talipes equinovarus","type":"related"}],"termid":"MONDO:0009028","xrefs":{"Monarch":{"xref_id":"0009028"}}}


id: MONDO:0005109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection caused by the human immunodeficiency virus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral sexually transmitted disease","termid":"MONDO:0021682"},{"relation_name":"is_a","term_name":"lentivirus infection","termid":"MONDO:0022034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIV infectious disease","secondary_identifiers":["EFO:0000764","ICD10CM:B20-B20","NCIT:C3108","DOID:526","UMLS:C0019693","SCTID:86406008","ICD9:042-042.99","ICD9:042","NANDO:2200810","MEDGEN:5583","MESH:D015658"],"synonyms":[{"name":"HIV infection","type":"exact"},{"name":"Human immunodeficiency virus caused disease or disorder","type":"exact"},{"name":"Human immunodeficiency virus disease or disorder","type":"exact"},{"name":"Human immunodeficiency virus infectious disease","type":"exact"},{"name":"human immunodeficiency virus infectious disease","type":"related"}],"termid":"MONDO:0005109","xrefs":{"Monarch":{"xref_id":"0005109"}}}


id: GO:0009491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete redox-active disulfide bond electron carrier (obsolete GO:0009491)","synonyms":[{"name":"redox-active disulfide bond electron carrier","type":"exact"},{"name":"redox-active disulphide bond electron carrier","type":"exact"}],"termid":"GO:0009491"}


id: PBO:0005180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor 2 (EF-2) Eft2,B","termid":"PBO:0005180"}


id: GO:0140504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Degradation of a lipid droplet by microautophagy.","definition_xrefs":["PMID:28838958","PMID:29293450","PMID:29601311","PMID:25070953","PMID:28394250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microautophagy","termid":"GO:0016237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"microlipophagy","synonyms":[{"name":"lipid droplet autophagy","type":"exact"}],"termid":"GO:0140504"}


id: GO:0035092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progressive compaction of the spermatid chromatin so that it reaches a level of condensation that is not compatible with nuclear activities such as transcription or DNA replication.","definition_xrefs":["GOC:bf","PMID:11735001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"},{"relation_name":"part_of","term_name":"spermatid nucleus differentiation","termid":"GO:0007289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"sperm DNA condensation","secondary_identifiers":["GO:0035093"],"synonyms":[{"name":"sperm chromatin condensation","type":"exact"},{"name":"spermatogenesis, exchange of chromosomal proteins","type":"related"}],"termid":"GO:0035092"}


id: PBO:0081830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 764","termid":"PBO:0081830"}


id: GO:0140871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of an RNA polymerase inhibitor.","definition_xrefs":["PMID:28475895","PMID:31048766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"},{"relation_name":"negatively_regulates","term_name":"RNA polymerase activity","termid":"GO:0097747"},{"relation_name":"negatively_regulates","term_name":"RNA polymerase inhibitor activity","termid":"GO:0140870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"negatively_regulates","termid":"GO:0016779"},{"rel_name":"negatively_regulates","termid":"GO:0003824"},{"rel_name":"negatively_regulates","termid":"GO:0016740"},{"rel_name":"regulates","termid":"GO:0030234"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"negatively_regulates","termid":"GO:0030234"},{"rel_name":"positively_regulates","termid":"GO:0016740"},{"rel_name":"positively_regulates","termid":"GO:0016779"},{"rel_name":"regulates","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0016779"},{"rel_name":"negatively_regulates","termid":"GO:0140098"},{"rel_name":"positively_regulates","termid":"GO:0140098"},{"rel_name":"regulates","termid":"GO:0016740"},{"rel_name":"negatively_regulates","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0140678","GO:0016779","GO:0140098","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"repressor of RNA polymerase inhibitor activity","termid":"GO:0140871"}


id: GO:0036437
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An Isw1 complex that binds DNA and has nucleosome-stimulated ATPase activity. In S. cerevisiae, contains an Isw1p ATPase subunit in complex with Ioc2p and Ioc4p.","definition_xrefs":["PMID:12482963","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Isw1 complex","termid":"GO:0016587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Isw1b complex","termid":"GO:0036437"}


id: GO:0045641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of basophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of granulocyte differentiation","termid":"GO:0030853"},{"relation_name":"is_a","term_name":"regulation of basophil differentiation","termid":"GO:0045640"},{"relation_name":"negatively_regulates","term_name":"basophil differentiation","termid":"GO:0030221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of basophil differentiation","synonyms":[{"name":"down regulation of basophil differentiation","type":"exact"},{"name":"down-regulation of basophil differentiation","type":"exact"},{"name":"downregulation of basophil differentiation","type":"exact"},{"name":"inhibition of basophil differentiation","type":"narrow"}],"termid":"GO:0045641"}


id: MONDO:0006070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute leukemia (obsolete MONDO:0006070)","termid":"MONDO:0006070","xrefs":{"Monarch":{"xref_id":"0006070"}}}


id: PBO:0084038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored cell wall protein of unknown function; induced in response to cell wall damaging agents and by mutations in genes involved in cell wall biogenesis; sequence similarity to YBR162C/TOS1, a covalently bound cell wall protein; protein abundance increases in response to DNA replication stress","termid":"PBO:0084038"}


id: PBO:0028860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_poly(A)+_mRNA_export_from_nucleus","termid":"PBO:0028860"}


id: PBO:0083373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially/completely overlaps the verified ORF CDC21/YOR074C; identified by RT-PCR","termid":"PBO:0083373"}


id: MONDO:0043765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bilateral hearing loss caused by progressive degeneration of cochlear structures and central auditory pathways, typically associated with the aging process.","definition_xrefs":["NCIT:C116367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensorineural hearing loss disorder","termid":"MONDO:0020678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presbycusis","secondary_identifiers":["icd11.foundation:1569854675","MESH:D011304","MEDGEN:10911","SCTID:49526009","UMLS:C0033074"],"synonyms":[{"name":"ARHI","type":"exact"},{"name":"Presbycuses","type":"related"},{"name":"age-related hearing impairment","type":"exact"},{"name":"age-related hearing loss","type":"related"},{"name":"presbyacusia","type":"related"},{"name":"presbycusis","type":"exact"},{"name":"senile deafness","type":"related"}],"termid":"MONDO:0043765","xrefs":{"Monarch":{"xref_id":"0043765"}}}


id: GO:0102154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4',6-tetrahydroxydibenzoylmethane + UDP-alpha-D-glucose = 8C-glucosyl-2-hydroxynaringenin + UDP + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 8C-naringenin dibenzoylmethane tautomer glucosyltransferase activity (obsolete GO:0102154)","termid":"GO:0102154"}


id: GO:0075318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ascus development, a process that leads to the formation of basidium, a sac-like structure produced by fungi of the phylum Ascomycota (sac fungi) in which sexually produced spores (ascospores), usually four or eight in number, are formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"ascus development","termid":"GO:0075317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ascus development","termid":"GO:0075318"}


id: MONDO:0013118
data:
  {"annotated_genes":["SJAG_01677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85890],"is_not":false,"summary":null,"term":"MONDO:0013118"}]},"cv_name":"mondo","definition":"Nijmegen breakage syndrome-like disorder is a rare, genetic multiple congenital anomalies/dysmorphic syndrome characterized by growth retardation, short stature, developmental delay, intellectual disability, craniofacial dysmorphism (i.e. severe microcephaly, sloping forehead, prominent eyes, broad nasal ridge, hypoplastic nasal septum, epicanthal folds), spontaneous chromosomal instability, cellular hypersensitivity to ionizing radiation and radioresistant DNA synthesis, without severe infections, immunodeficiency or cancer predisposition. Additional reported features include mild spasticity, slight and nonprogressive ataxia, hyperopia, multiple pigmented nevi, widely spaced nipples, and clinodactyly.","definition_xrefs":["Orphanet:240760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"Nijmegen breakage syndrome-like disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1014526672","GARD:17184","OMIM:613078","NCIT:C153178","UMLS:C2751318","SCTID:766753005","MEDGEN:442700","MESH:C567767"],"synonyms":[{"name":"NBSLD","type":"exact"},{"name":"NBs-like disorder","type":"exact"},{"name":"Nijmegen breakage syndrome-like disorder","type":"exact"},{"name":"RAD50 deficiency","type":"exact"},{"name":"Rad50 deficiency","type":"related"},{"name":"microcephaly and chromosomal instability without immunodeficiency","type":"exact"},{"name":"microcephaly and spontaneous chromosome instability without immunodeficiency","type":"related"}],"termid":"MONDO:0013118","terms_by_termid":{"MONDO:0013118":null},"xrefs":{"Monarch":{"xref_id":"0013118"}}}


id: MONDO:0010073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondyloepiphyseal dysplasia tarda, Kohn type is characterized by short trunk dwarfism, progressive involvement of the spine and epiphyses and mild-to-moderate intellectual deficit.","definition_xrefs":["Orphanet:163665"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia tarda","termid":"MONDO:0019667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia tarda, Kohn type","secondary_identifiers":["OMIM:271620","SCTID:719202006","UMLS:C1849053","GARD:16995","icd11.foundation:758715188","DOID:0112292","MEDGEN:338603","MESH:C564796"],"synonyms":[{"name":"Sedt with intellectual disability","type":"related"},{"name":"Sedt with mental retardation","type":"related"},{"name":"spondyloepiphyseal dysplasia tarda with intellectual disability","type":"related"},{"name":"spondyloepiphyseal dysplasia tarda with mental retardation","type":"related"}],"termid":"MONDO:0010073","xrefs":{"Monarch":{"xref_id":"0010073"}}}


id: GO:1904007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phospholipase D activity.","definition_xrefs":["PMID:11211872","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phospholipase D activity (obsolete GO:1904007)","synonyms":[{"name":"activation of choline phosphatase activity","type":"narrow"},{"name":"activation of lecithinase D activity","type":"narrow"},{"name":"activation of lipophosphodiesterase II activity","type":"narrow"},{"name":"activation of phosphatidylcholine phosphatidohydrolase activity","type":"narrow"},{"name":"activation of phospholipase D activity","type":"narrow"},{"name":"positive regulation of choline phosphatase activity","type":"exact"},{"name":"positive regulation of lecithinase D activity","type":"exact"},{"name":"positive regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"positive regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up regulation of choline phosphatase activity","type":"exact"},{"name":"up regulation of lecithinase D activity","type":"exact"},{"name":"up regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"up regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up regulation of phospholipase D activity","type":"exact"},{"name":"up-regulation of choline phosphatase activity","type":"exact"},{"name":"up-regulation of lecithinase D activity","type":"exact"},{"name":"up-regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"up-regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up-regulation of phospholipase D activity","type":"exact"},{"name":"upregulation of choline phosphatase activity","type":"exact"},{"name":"upregulation of lecithinase D activity","type":"exact"},{"name":"upregulation of lipophosphodiesterase II activity","type":"exact"},{"name":"upregulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"upregulation of phospholipase D activity","type":"exact"}],"termid":"GO:1904007"}


id: PBO:0030532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_morphology","termid":"PBO:0030532"}


id: GO:0014001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sclerenchyma cell. A sclerenchyma cell is a plant cell with thick lignified walls, normally dead at maturity and specialized for structural strength. Includes fiber cells, that are greatly elongated; and sclereids, that are more isodiametric. Intermediate types exist. Cells may or may not be devoid of protoplasm at maturity. Cell form and size are variable.","definition_xrefs":["CL:0000276","GOC:jid","GOC:ef","PO:0000077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sclerenchyma cell differentiation","termid":"GO:0014001"}


id: PBO:0108560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination protein Saw1","termid":"PBO:0108560"}


id: PBO:0001346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2C2 type","termid":"PBO:0001346"}


id: MONDO:0060704
data:
  {"annotated_genes":["SJAG_00115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86367],"is_not":false,"summary":null,"term":"MONDO:0060704"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00115":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with spastic quadriplegia and brain abnormalities with or without seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1633724","OMIM:617977","UMLS:C4693816"],"synonyms":[{"name":"Elhattab-Alkuraya syndrome","type":"related"},{"name":"NEDSBAS","type":"related"},{"name":"neurodevelopmental disorder with spastic quadriplegia and brain abnormalities with or without seizures","type":"exact"}],"termid":"MONDO:0060704","terms_by_termid":{"MONDO:0060704":null},"xrefs":{"Monarch":{"xref_id":"0060704"}}}


id: PBO:0088642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum EF hand protein","termid":"PBO:0088642"}


id: GO:0042013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-19.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-19 binding","synonyms":[{"name":"IL-19 binding","type":"exact"}],"termid":"GO:0042013"}


id: SOFP:description
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Free-text description of feature","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"description","termid":"SOFP:description"}


id: GO:0048892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lateral line nerve over time, form its formation to the mature structure. Lateral line nerves project primarily to an octavolateralis column in the hindbrain that consists of the medial octavolateralis nucleus (MON), the caudal octavolateralis nucleus, and the magnocellular nucleus.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"lateral line system development","termid":"GO:0048925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve development","synonyms":[{"name":"nLL development","type":"exact"}],"termid":"GO:0048892"}


id: PBO:0055792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase like 2","termid":"PBO:0055792"}


id: PBO:0083255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; largely overlaps ORF YPL113C; diploid deletion in BY4743 strain background exhibits high budding index","termid":"PBO:0083255"}


id: GO:0019076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dissemination of mature viral particles from a host cell, e.g. by cell lysis or the budding of virus particles from the cell membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"is_a","term_name":"exit from host cell","termid":"GO:0035891"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral release from host cell","secondary_identifiers":["VZ:1076","Reactome:R-HSA-168298"],"synonyms":[{"name":"release of virus from host","type":"exact"},{"name":"viral exit","type":"exact"},{"name":"viral release","type":"exact"},{"name":"viral shedding","type":"exact"},{"name":"virus exit from host cell","type":"exact"}],"termid":"GO:0019076"}


id: PR:Q9UTA6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.12c gene.","definition_xrefs":["UniProtKB:Q9UTA6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hydrolase C25B8.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.12c","synonyms":[{"name":"Spom972h-SPAC25B8.12c","type":"exact"}],"termid":"PR:Q9UTA6"}


id: PBO:0049365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 1","termid":"PBO:0049365"}


id: PBO:0085988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for normal microtubule organization","termid":"PBO:0085988"}


id: MONDO:0859576
data:
  {"annotated_genes":["SJAG_03436"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85967],"is_not":false,"summary":null,"term":"MONDO:0859576"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"},{"relation_name":"is_a","term_name":"Atelis syndrome","termid":"MONDO:0859393"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03436":null},"genotype_count":0,"is_obsolete":false,"name":"Atelis syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620185","UMLS:C5774282","MEDGEN:1824055"],"termid":"MONDO:0859576","terms_by_termid":{"MONDO:0859576":null},"xrefs":{"Monarch":{"xref_id":"0859576"}}}


id: GO:0004714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.","definition_xrefs":["GOC:mah","EC:2.7.10.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine kinase activity","termid":"GO:0004713"},{"relation_name":"is_a","term_name":"transmembrane receptor protein kinase activity","termid":"GO:0019199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0038023","GO:0016740","GO:0004672","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"transmembrane receptor protein tyrosine kinase activity","secondary_identifiers":["Reactome:R-HSA-166544","Reactome:R-HSA-8987179","Reactome:R-HSA-8987255","Reactome:R-HSA-8852552","Reactome:R-HSA-8986985","Reactome:R-HSA-167019","Reactome:R-HSA-8982163","Reactome:R-HSA-8950340","Reactome:R-HSA-8983371","Reactome:R-HSA-8950354","Reactome:R-HSA-8950364","Reactome:R-HSA-74742","Reactome:R-HSA-8987084","Reactome:R-HSA-8987202","Reactome:R-HSA-8950591","Reactome:R-HSA-8987096","Reactome:R-HSA-177930","Reactome:R-HSA-169905","Reactome:R-HSA-8986994","Reactome:R-HSA-8853792","Reactome:R-HSA-177933","Reactome:R-HSA-8987150","Reactome:R-HSA-8987070","Reactome:R-HSA-8950423","Reactome:R-HSA-8950757","Reactome:R-HSA-198295","Reactome:R-HSA-8950269","Reactome:R-HSA-8950453","Reactome:R-HSA-167683","Reactome:R-HSA-8987129","Reactome:R-HSA-8950405","Reactome:R-HSA-8950537","Reactome:R-HSA-6784324","Reactome:R-HSA-74711","Reactome:R-HSA-8950485","Reactome:R-HSA-8983300","Reactome:R-HSA-8983424","Reactome:R-HSA-8986995","Reactome:R-HSA-8987012","Reactome:R-HSA-8987042","Reactome:R-HSA-8987141","Reactome:R-HSA-8983309","Reactome:R-HSA-8987040"],"synonyms":[{"name":"receptor protein tyrosine kinase activity","type":"related"},{"name":"receptor protein-tyrosine kinase activity","type":"related"}],"termid":"GO:0004714"}


id: PBO:0088202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc transporter; localizes to the ER; null mutant is sensitive to calcofluor white, leads to zinc accumulation in cytosol; ortholog of the mouse KE4 and member of the ZIP (ZRT, IRT-like Protein) family","termid":"PBO:0088202"}


id: GO:0044218
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell membrane of a secondary organism with which the first organism is interacting.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"other organism part","termid":"GO:0044217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"other organism cell membrane","secondary_identifiers":["GO:0044279"],"synonyms":[{"name":"foreign membrane","type":"related"},{"name":"other organism membrane","type":"broad"}],"termid":"GO:0044218"}


id: MOD:01923
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-aspartic acid residue and an L-lysine residue by an isopeptide bond to form N6-(L-aspartyl)-L-lysine and the release of water.","definition_xrefs":["PubMed:15044436","RESID:AA0583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-(L-aspartyl)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(2S)-2-amino-3-carboxypropanoyl]amino)hexanoic acid","type":"exact"},{"name":"N(epsilon)-(alpha-aspartyl)lysine","type":"exact"},{"name":"N6-(L-aspartyl)-L-lysine","type":"exact"},{"name":"XLNK-4Asp-N6Lys(Asp)","type":"exact"},{"name":"alpha-(N6-lysyl)aspartyl acid","type":"exact"},{"name":"aspartyl N6-lysine","type":"exact"}],"termid":"MOD:01923"}


id: GO:0038097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An Fc-epsilon receptor signaling pathway that results in the change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors.","definition_xrefs":["GOC:phg","PMID:12413516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor mediated stimulatory signaling pathway","termid":"GO:0002431"},{"relation_name":"is_a","term_name":"positive regulation of mast cell activation","termid":"GO:0033005"},{"relation_name":"is_a","term_name":"Fc-epsilon receptor signaling pathway","termid":"GO:0038095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell activation by Fc-epsilon receptor signaling pathway","synonyms":[{"name":"Fc epsilon RI-dependent mast cell activation","type":"exact"},{"name":"Fc epsilon RI-mediated mast cell activation","type":"exact"},{"name":"positive regulation of mast cell activation by Fc-epsilon receptor signalling pathway","type":"exact"}],"termid":"GO:0038097"}


