# terms

id: MONDO:0054754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis, acute, infection-induced, susceptibility to","termid":"MONDO:0800174"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 8","secondary_identifiers":["UMLS:C4693542","MEDGEN:1646997","OMIM:617900"],"synonyms":[{"name":"Herpes simplex encephalitis, Susceptibility to, 6","type":"related"},{"name":"IIAE8","type":"related"},{"name":"encephalopathy, ACUTE, infection-induced (HERPES-specific), susceptibility to, 8","type":"related"}],"termid":"MONDO:0054754","xrefs":{"Monarch":{"xref_id":"0054754"}}}


id: PBO:0085798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; contains a J-domain, which is a region with homology to the E. coli DnaJ protein","termid":"PBO:0085798"}


id: GO:0102432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin + S-adenosyl-L-methionine = H+ + rhamnetin + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:73115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"quercetin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13906"],"termid":"GO:0102432"}


id: MONDO:0018883
data:
  {"annotated_genes":["SJAG_01957","SJAG_01537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012071"},{"annotations":[85448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010020"}]},"cv_name":"mondo","definition":"A lipodystrophy characterized by the association of lipoatrophy, hypertriglyceridemia, hepatomegaly and acromegaloid features. BSCL belongs to the group of extreme insulin resistance syndromes, which also includes leprechaunism, Rabson-Mendenhall syndrome, acquired generalized lipodystrophy, and types A and B insulin resistance.","definition_xrefs":["Orphanet:528"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01537":null,"SJAG_01957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"Berardinelli-Seip congenital lipodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:250.80","NANDO:1200859","GARD:13388","icd11.foundation:1628738474","MedDRA:10024603","NANDO:2200465","SCTID:127012008","NCIT:C84594","icd11.foundation:641763399"],"synonyms":[{"name":"BSCL","type":"exact"},{"name":"Beradinelli-Seip syndrome","type":"exact"},{"name":"Berardinelli Seip syndrome","type":"exact"},{"name":"Berardinelli lipodystrophy syndrome","type":"exact"},{"name":"Brunzell syndrome","type":"exact"},{"name":"GCL","type":"exact"},{"name":"Lawrence-Seip syndrome","type":"related"},{"name":"Seip-Bernardinelli syndrome","type":"exact"},{"name":"congenital generalised lipodystrophy","type":"related"},{"name":"congenital generalized lipodystrophy","type":"related"},{"name":"generalised congenital lipodystrophy","type":"exact"},{"name":"generalized congenital lipodystrophy","type":"exact"},{"name":"lipoatrophic diabetes","type":"related"},{"name":"total lipodystrophy","type":"exact"}],"termid":"MONDO:0018883","terms_by_termid":{"MONDO:0010020":null,"MONDO:0012071":null},"xrefs":{"Monarch":{"xref_id":"0018883"}}}


id: GO:0046111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xanthine, 2,6-dihydroxypurine, a purine formed in the metabolic breakdown of guanine but not present in nucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase biosynthetic process","termid":"GO:0009113"},{"relation_name":"is_a","term_name":"xanthine metabolic process","termid":"GO:0046110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"xanthine biosynthetic process","synonyms":[{"name":"xanthine anabolism","type":"exact"},{"name":"xanthine biosynthesis","type":"exact"},{"name":"xanthine formation","type":"exact"},{"name":"xanthine synthesis","type":"exact"}],"termid":"GO:0046111"}


id: PBO:0040956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 27","termid":"PBO:0040956"}


id: GO:0004424
data:
  {"annotated_genes":["SJAG_00592"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76190],"is_not":false,"summary":null,"term":"GO:0004424"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + H2O.","definition_xrefs":["EC:4.2.1.19","RHEA:11040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"imidazoleglycerol-phosphate dehydratase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:IMIDPHOSDEHYD-RXN","KEGG_REACTION:R03457"],"synonyms":[{"name":"D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate hydro-lyase [3-(imidazol-4-yl)-2-oxopropyl-phosphate-forming]","type":"related"},{"name":"D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate hydro-lyase activity","type":"related"},{"name":"IGP dehydratase activity","type":"related"},{"name":"imidazoleglycerol phosphate dehydratase activity","type":"exact"}],"termid":"GO:0004424","terms_by_termid":{"GO:0004424":null}}


id: PBO:0057517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 635","termid":"PBO:0057517"}


id: PBO:0088591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lys48-specific deubiquitinase Ubp14","termid":"PBO:0088591"}


id: GO:0033735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + H2O + NAD(P)+ = oxaloacetate + NH3 + NAD(P)H + H+.","definition_xrefs":["EC:1.4.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"aspartate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R07164","GO:0106351","MetaCyc:1.4.1.21-RXN","KEGG_REACTION:R07165","GO:0106352"],"synonyms":[{"name":"L-aspartate:NAD(P)+ oxidoreductase (deaminating) activity","type":"related"},{"name":"NAD-dependent aspartate dehydrogenase activity","type":"related"},{"name":"NADH2-dependent aspartate dehydrogenase activity","type":"related"},{"name":"NADP+-dependent aspartate dehydrogenase activity","type":"related"},{"name":"aspartate dehydrogenase NAD activity","type":"narrow"},{"name":"aspartate dehydrogenase NADP activity","type":"narrow"}],"termid":"GO:0033735"}


id: MONDO:0016921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 1 disorder","termid":"MONDO:0700008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 1","secondary_identifiers":["SCTID:726338000","Orphanet:262191","UMLS:C4518488","GARD:20842","MEDGEN:1379629"],"synonyms":[{"name":"partial duplication of chromosome type 1","type":"exact"},{"name":"partial trisomy of chromosome 1","type":"exact"}],"termid":"MONDO:0016921","xrefs":{"Monarch":{"xref_id":"0016921"}}}


id: GO:0062055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A regulation of the phtosynthetic light reaction in which the light harvesting antenna complexes transition between photosystems.","definition_xrefs":["PMID:29967049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthetic state transition","termid":"GO:0062055"}


id: MONDO:0024378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A circadian sleep disorder characterized by bedtime and wake-up time much earlier than normal, although sleep quality is normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"circadian rhythm sleep disorder","termid":"MONDO:0024361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circadian rhythm sleep disorder, advanced sleep phase type","secondary_identifiers":["MEDGEN:199728","SCTID:31537005","UMLS:C0751758","ICD10CM:G47.22","ICD9:327.32"],"synonyms":[{"name":"ASPS","type":"broad"},{"name":"advanced sleep phase syndrome","type":"broad"},{"name":"circadian rhythm sleep disorder, advanced sleep phase","type":"related"},{"name":"circadian rhythm sleep disorder, advanced sleep phase type","type":"exact"},{"name":"sleep-wake schedule disorder, advanced phase type","type":"exact"}],"termid":"MONDO:0024378","xrefs":{"Monarch":{"xref_id":"0024378"}}}


id: PBO:0109629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 16 (pseudogene)","termid":"PBO:0109629"}


id: PBO:0064959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 11","termid":"PBO:0064959"}


id: GO:0043460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a long or persistent exposure to a lithium ion stimulus.","definition_xrefs":["PMID:10208444"],"gene_count":0,"genotype_count":0,"name":"obsolete response to long exposure to lithium ion (obsolete GO:0043460)","synonyms":[{"name":"response to long exposure to lithium ion","type":"exact"}],"termid":"GO:0043460"}


id: GO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Progression from M phase to G1 phase of the mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete M/G1 transition of mitotic cell cycle (obsolete GO:0000216)","synonyms":[{"name":"M/G1 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0000216"}


id: PBO:0038893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGB divergent transcript","termid":"PBO:0038893"}


id: PBO:0002721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-L homolog Fta1","termid":"PBO:0002721"}


id: PBO:0070169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 83 pseudogene","termid":"PBO:0070169"}


id: GO:0010398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylogalacturonan, a pectin characterized by a backbone of alpha-(1->4)-linked D-galacturonic acid residues substituted on C-3 with beta-D-xylopyranose residues.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonan metabolic process","termid":"GO:0010393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"xylogalacturonan metabolic process","synonyms":[{"name":"xylogalacturonan metabolism","type":"exact"}],"termid":"GO:0010398"}


id: GO:0086096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An adenylate cyclase-inhibiting adrenergic receptor signaling pathway which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","PMID:10571541","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in heart process (obsolete GO:0086096)","synonyms":[{"name":"G-inhibitory-coupled Beta2AR signaling pathway involved in heart process","type":"exact"},{"name":"Gi-coupled Beta2-AR signaling pathway involved in heart process","type":"exact"},{"name":"Gi-coupled adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"cardiac adrenergic receptor signaling pathway via inhibition of adenylate cyclase activity","type":"exact"}],"termid":"GO:0086096"}


id: PBO:0078822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 2-5","termid":"PBO:0078822"}


id: MOD:00923
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Cy5 CyDye DIGE Fluor saturation dye","synonyms":[{"name":"Cy5 CyDye DIGE Fluor saturation dye","type":"related"},{"name":"CyDye-Cy5","type":"related"}],"termid":"MOD:00923"}


id: MONDO:0003112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that arises from the stomach. It includes choriocarcinoma and immature teratoma.","definition_xrefs":["NCIT:C5486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cancer","termid":"MONDO:0001056"},{"relation_name":"is_a","term_name":"extragonadal germ cell cancer","termid":"MONDO:0003113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"malignant gastric germ cell tumor","secondary_identifiers":["DOID:4716","UMLS:C1334584","MEDGEN:233663"],"synonyms":[{"name":"germ cell tumor of the stomach","type":"exact"},{"name":"germ cell tumour of the stomach","type":"exact"},{"name":"malignant gastric germ cell neoplasm","type":"exact"},{"name":"malignant gastric germ cell tumor","type":"exact"},{"name":"malignant germ cell neoplasm of stomach","type":"exact"},{"name":"malignant germ cell neoplasm of the stomach","type":"exact"},{"name":"malignant germ cell tumor of stomach","type":"exact"},{"name":"malignant germ cell tumor of the stomach","type":"exact"},{"name":"malignant germ cell tumour of stomach","type":"exact"},{"name":"malignant germ cell tumour of the stomach","type":"exact"}],"termid":"MONDO:0003112","xrefs":{"Monarch":{"xref_id":"0003112"}}}


id: GO:0008261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with allatostatin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"allatostatin receptor activity","termid":"GO:0008261"}


id: PBO:0049357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 15","termid":"PBO:0049357"}


id: MONDO:1010705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Galactosemia that occurs in kangaroo.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosemia, non-human animal","termid":"MONDO:1010101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosemia, kangaroo","secondary_identifiers":["OMIA:001144-9322"],"termid":"MONDO:1010705","xrefs":{"Monarch":{"xref_id":"1010705"}}}


id: PBO:0084070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase involved in initiation of Mitotic Exit Network (MEN); GTP-binding protein of the Ras superfamily; accumulates at daughter spindle pole body and activates MEN kinase cascade; controls actomyosin and septin dynamics during cytokinesis","termid":"PBO:0084070"}


id: GO:1905508
data:
  {"annotated_genes":["SJAG_03508","SJAG_01371","SJAG_00918","SJAG_01790","SJAG_00229","SJAG_00082","SJAG_02514","SJAG_05319","SJAG_01775","SJAG_06270","SJAG_00883","SJAG_03915","SJAG_04901","SJAG_01546","SJAG_02529","SJAG_01224","SJAG_01211","SJAG_04455","SJAG_03437","SJAG_02731","SJAG_05266","SJAG_05220"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101589,74991,107850,95971,110476,105360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061509"},{"annotations":[107545],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902543"},{"annotations":[114237,91637,97202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902441"},{"annotations":[90345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902440"},{"annotations":[107816,100843,98950,91322,97105,89484,109196,110199,90088,114403,117217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a microtubule organizing center.","definition_xrefs":["PMID:19001497","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00883":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_01790":null,"SJAG_02514":null,"SJAG_02529":null,"SJAG_02731":null,"SJAG_03437":null,"SJAG_03508":null,"SJAG_03915":null,"SJAG_04455":null,"SJAG_04901":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to microtubule organizing center","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in microtubule organizing center","type":"exact"},{"name":"protein localisation to microtubule organizing center","type":"exact"},{"name":"protein localization in microtubule organizing center","type":"exact"}],"termid":"GO:1905508","terms_by_termid":{"GO:0061509":null,"GO:1902440":null,"GO:1902441":null,"GO:1902543":null,"GO:1990976":null}}


id: MONDO:0001131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete duodenum adenocarcinoma (obsolete MONDO:0001131)","termid":"MONDO:0001131","xrefs":{"Monarch":{"xref_id":"0001131"}}}


id: PBO:0053761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1003","termid":"PBO:0053761"}


id: PBO:0047789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4 like 6","termid":"PBO:0047789"}


id: PBO:0042336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD68 molecule","termid":"PBO:0042336"}


id: GO:0060515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the urogenital sinus epithelium into the area in which the prostate gland will develop.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"part_of","term_name":"prostatic bud formation","termid":"GO:0060513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate field specification","termid":"GO:0060515"}


id: PR:P0CY14
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mat3-Mm gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CY14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced mating-type M-specific polypeptide Mi (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.01c","synonyms":[{"name":"Spom972h-mat3-Mm","type":"exact"}],"termid":"PR:P0CY14"}


id: MONDO:0012770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 15","secondary_identifiers":["UMLS:C2677771","GARD:15538","MESH:C567447","OMIM:611959","MEDGEN:437036"],"synonyms":[{"name":"HPC15","type":"exact"},{"name":"prostate cancer, hereditary, 15","type":"exact"}],"termid":"MONDO:0012770","xrefs":{"Monarch":{"xref_id":"0012770"}}}


id: PBO:0040313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 7","termid":"PBO:0040313"}


id: GO:2000651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transport","termid":"GO:1902307"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sodium ion transmembrane transporter activity","synonyms":[{"name":"positive regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000651"}


id: MONDO:0005082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the prostate gland","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"prostate carcinoma","termid":"MONDO:0005159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate adenocarcinoma","secondary_identifiers":["UMLS:C0007112","DOID:2526","EFO:0000673","MEDGEN:764","ONCOTREE:PRAD","NCIT:C2919","SCTID:399490008"],"synonyms":[{"name":"adenocarcinoma of prostate","type":"exact"},{"name":"adenocarcinoma of the prostate","type":"exact"},{"name":"prad","type":"related"},{"name":"prostate adenocarcinoma","type":"exact"},{"name":"prostate gland adenocarcinoma","type":"exact"}],"termid":"MONDO:0005082","xrefs":{"Monarch":{"xref_id":"0005082"}}}


id: PBO:0001582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aldolase Gly1 (predicted)","termid":"PBO:0001582"}


id: MONDO:0019443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenitally uncorrected transposition of the great arteries (congenitally uncorrected TGA), also referred to as complete transposition, is a congenital cardiac malformation characterized by atrioventricular concordance and ventriculoarterial (VA) discordance.","definition_xrefs":["Orphanet:860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposition of the great arteries","termid":"MONDO:0000153"},{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dextro-looped transposition of the great arteries","secondary_identifiers":["NANDO:1200698","DOID:0060770","OMIMPS:608808","UMLS:C5671327","GARD:5476","MEDGEN:1812310"],"synonyms":[{"name":"D-TGA","type":"exact"},{"name":"DTGA","type":"exact"},{"name":"congenitally uncorrected transposition of the great arteries","type":"exact"},{"name":"congenitally uncorrected transposition of the great vessels","type":"exact"},{"name":"isolated ventriculoarterial discordance","type":"exact"},{"name":"ventriculoarterial discordance with atrioventricular concordance","type":"exact"}],"termid":"MONDO:0019443","xrefs":{"Monarch":{"xref_id":"0019443"}}}


id: FYPO:0002275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein degradation is abnormal. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process","termid":"FYPO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein degradation","synonyms":[{"name":"abnormal protein breakdown","type":"exact"},{"name":"abnormal protein catabolic process","type":"exact"},{"name":"abnormal protein catabolism","type":"exact"}],"termid":"FYPO:0002275"}


id: MONDO:1010608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Exocrine pancreatic insufficiency that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocrine pancreatic insufficiency, non-human animal","termid":"MONDO:1010058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocrine pancreatic insufficiency, domestic cat","secondary_identifiers":["OMIA:000765-9685"],"termid":"MONDO:1010608","xrefs":{"Monarch":{"xref_id":"1010608"}}}


id: PBO:0000845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc6 (predicted)","termid":"PBO:0000845"}


id: PBO:0064802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 catalytic subunit gamma","termid":"PBO:0064802"}


id: GO:0044693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: trehalose(out) + H+(out) = trehalose(in) + H+(in).","definition_xrefs":["PMID:11136464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"trehalose transmembrane transporter activity","termid":"GO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"trehalose:proton symporter activity","synonyms":[{"name":"trehalose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0044693"}


id: GO:0038066
data:
  {"annotated_genes":["SJAG_05000","SJAG_02183","SJAG_00027","SJAG_03828","SJAG_03893","SJAG_01199","SJAG_02013","SJAG_06621","SJAG_00318","SJAG_02342","SJAG_06592","SJAG_04825","SJAG_03384","SJAG_02000","SJAG_02135","SJAG_01587","SJAG_03185","SJAG_02945","SJAG_03903","SJAG_06622","SJAG_00117","SJAG_01718","SJAG_02592","SJAG_04777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70467,73493,94708,102071,106595,110652],"is_not":false,"summary":null,"term":"GO:0038066"},{"annotations":[95372,99765,96304,92003,117379,118618],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903753"},{"annotations":[109254,95593,112130,112788,117672,109251,118584,109248,109249,109253,109250,109252],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900745"}]},"cv_name":"biological_process","definition":"A MAPK cascade containing at least the p38MAPK (MAPK14) MAP kinase, or Hog1 in yeast. It starts with the activation of a MAP3K, and the consecutive activation of a MPK2K and of p38MAPK. The cascade can also contain an additional tier: the upstream MAP4K. The kinases in each tier phosphorylate and activate the kinases in the downstream tier. The p38MAPK cascade is activated by stress signals, including hyperosmolarity, as well as by G protein-coupled receptors, growth factors, and cytokines, and results in cellular responses such as cell proliferation, cell differentiation, apoptosis and inflammation.","definition_xrefs":["PMID:32794416","PMID:23125017","PMID:20811974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00117":null,"SJAG_00318":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_01718":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_02945":null,"SJAG_03185":null,"SJAG_03384":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03903":null,"SJAG_04777":null,"SJAG_04825":null,"SJAG_05000":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"p38MAPK cascade","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-450302"],"synonyms":[{"name":"MAPK14 cascade","type":"related"},{"name":"osmosensory signaling MAPK cascade","type":"narrow"},{"name":"p38 MAPK cascade","type":"exact"},{"name":"p38 cascade","type":"exact"}],"termid":"GO:0038066","terms_by_termid":{"GO:0038066":null,"GO:1900745":null,"GO:1903753":null}}


id: GO:0038201
data:
  {"annotated_genes":["SJAG_02723","SJAG_01703","SJAG_01509","SJAG_03067","SJAG_00117","SJAG_01320","SJAG_04460","SJAG_04987","SJAG_00167","SJAG_01020"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68760,78764,79283,113329,106962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031931"},{"annotations":[108882,77445,79284,72959,77912,99702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031932"}]},"cv_name":"cellular_component","definition":"A protein complex that contains at least TOR (target of rapamycin) in complex with other signaling components. Mediates the phosphorylation and activation of downstream signaling components including PKB (AKT) or S6K.","definition_xrefs":["Wikipedia:MTORC2","Wikipedia:MTORC1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00167":null,"SJAG_01020":null,"SJAG_01320":null,"SJAG_01509":null,"SJAG_01703":null,"SJAG_02723":null,"SJAG_03067":null,"SJAG_04460":null,"SJAG_04987":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TOR complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TOR signaling complex","type":"exact"},{"name":"mTOR complex","type":"narrow"},{"name":"target of rapamycin complex","type":"exact"}],"termid":"GO:0038201","terms_by_termid":{"GO:0031931":null,"GO:0031932":null}}


id: MONDO:0001010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete natural killer cell leukemia (obsolete MONDO:0001010)","termid":"MONDO:0001010","xrefs":{"Monarch":{"xref_id":"0001010"}}}


id: PBO:0068475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 54, pseudogene","termid":"PBO:0068475"}


id: PR:O13642
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lipoyl synthase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02841","PANTHER:PTHR10949:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoyl synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.15","secondary_identifiers":["UniProtKB:O13642"],"synonyms":[{"name":"LS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Lip-syn (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LIAS","type":"exact"},{"name":"lipoate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lipoic acid synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13642"}


id: GO:0106193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of inorganic cations and their chelates linked to the hydrolysis of a diphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inorganic cations and their chelates linked to the hydrolysis of a diphosphate (obsolete GO:0106193)","termid":"GO:0106193"}


id: GO:0009177
data:
  {"annotated_genes":["SJAG_04487","SJAG_03771","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70277,79842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[70276,79815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine deoxynucleoside monophosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate biosynthetic process","termid":"GO:0009130"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009157"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009176"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside monophosphate anabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"pyrimidine deoxyribonucleoside monophosphate formation","type":"exact"},{"name":"pyrimidine deoxyribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009177","terms_by_termid":{"GO:0006226":null,"GO:0006231":null}}


id: PBO:0083862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Farnesyl pyrophosphate synthetase; has both dimethylallyltranstransferase and geranyltranstransferase activities; catalyzes the formation of C15 farnesyl pyrophosphate units for isoprenoid and sterol biosynthesis","termid":"PBO:0083862"}


id: GO:0035449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid thylakoid membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of thylakoid membrane","termid":"GO:0035448"},{"relation_name":"is_a","term_name":"extrinsic component of plastid membrane","termid":"GO:0035452"},{"relation_name":"part_of","term_name":"plastid thylakoid membrane","termid":"GO:0055035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of plastid thylakoid membrane","synonyms":[{"name":"extrinsic to plastid thylakoid membrane","type":"narrow"},{"name":"peripheral to plastid thylakoid membrane","type":"exact"}],"termid":"GO:0035449"}


id: GO:0099111
data:
  {"annotated_genes":["SJAG_04001","SJAG_01863","SJAG_02431","SJAG_00368","SJAG_03073","SJAG_00851","SJAG_01224","SJAG_02651","SJAG_02761","SJAG_01371","SJAG_02336","SJAG_01370","SJAG_03437","SJAG_00918","SJAG_04387","SJAG_02737","SJAG_01613","SJAG_01211","SJAG_02509","SJAG_01297","SJAG_02045","SJAG_01662","SJAG_03673","SJAG_00140","SJAG_00113","SJAG_02286","SJAG_04143","SJAG_03540","SJAG_05185","SJAG_05220","SJAG_00594","SJAG_02731","SJAG_05266","SJAG_04003","SJAG_02561","SJAG_05319","SJAG_00397","SJAG_01775","SJAG_04597","SJAG_03835","SJAG_01546","SJAG_00332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114252,91725,117243,101048,103279,88098,103571,97902,111361,111710,92183,91334,95543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[106905,101750,111534],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[107740,71024,101761,109917,75473,114254,117247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[99557,97977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[91727,99558,88102,76700,97904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[94752],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[104063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[104218,108576,100707,118967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[90088,107816,100843,89484,91322,114403,117217,110199,109196,98950,97105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[91491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010970"},{"annotations":[104861,105192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"A microtubule-based process that results in the transport of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.","definition_xrefs":["ISBN:0815316194","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02651":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04143":null,"SJAG_04387":null,"SJAG_04597":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"microtubule-based transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0099111","terms_by_termid":{"GO:0000743":null,"GO:0010970":null,"GO:0030989":null,"GO:0032118":null,"GO:0047496":null,"GO:0090561":null,"GO:0098863":null,"GO:0099117":null,"GO:0140210":null,"GO:1902854":null,"GO:1990976":null}}


id: PBO:0057450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 570","termid":"PBO:0057450"}


id: MONDO:0011226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the POU4F3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 15","secondary_identifiers":["DOID:0110546","MEDGEN:355451","MESH:C566545","OMIM:602459","UMLS:C1865366","GARD:18109"],"synonyms":[{"name":"DFNA15","type":"narrow"},{"name":"POU4F3 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 15","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 15","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in POU4F3","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 15","type":"narrow"},{"name":"deafness, autosomal dominant 15","type":"narrow"},{"name":"deafness, autosomal dominant type 15","type":"narrow"}],"termid":"MONDO:0011226","xrefs":{"Monarch":{"xref_id":"0011226"}}}


id: PBO:0055107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2525","termid":"PBO:0055107"}


id: MONDO:0002978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm that arises in the orbit. It is characterized by the presence of round cells with myoblastic differentiation and a fibrovascular stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orbit rhabdomyosarcoma","termid":"MONDO:0002580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"orbit alveolar rhabdomyosarcoma","secondary_identifiers":["MEDGEN:235408","DOID:4384","UMLS:C1335126","NCIT:C6247"],"synonyms":[{"name":"alveolar rhabdomyosarcoma of orbit","type":"exact"},{"name":"alveolar rhabdomyosarcoma of the orbit","type":"exact"}],"termid":"MONDO:0002978","xrefs":{"Monarch":{"xref_id":"0002978"}}}


id: PBO:0078597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 10, Y-linked","termid":"PBO:0078597"}


id: SO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Y RNAs are components of the Ro ribonucleoprotein particle (Ro RNP), in association with Ro60 and La proteins. The Y RNAs and Ro60 and La proteins are well conserved, but the function of the Ro RNP is not known. In humans the RNA component can be one of four small RNAs: hY1, hY3, hY4 and hY5. These small RNAs are predicted to fold into a conserved secondary structure containing three stem structures. The largest of the four, hY1, contains an additional hairpin.","direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Y_RNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:Y_RNA","type":"exact"},{"name":"Y RNA","type":"exact"}],"termid":"SO:0000405"}


id: PBO:0076187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 pseudogene 2","termid":"PBO:0076187"}


id: PR:Q9P769
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1002 gene.","definition_xrefs":["UniProtKB:Q9P769","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L10-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP7G5.05","synonyms":[{"name":"Spom972h-rpl1002","type":"exact"}],"termid":"PR:Q9P769"}


id: PBO:0008885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide matMc","termid":"PBO:0008885"}


id: PBO:0005306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane protein involved in inositol lipid-mediated signaling (predicted)","termid":"PBO:0005306"}


id: GO:0000513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a actin severing protein.","definition_xrefs":["PMID:25451933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function activator activity","termid":"GO:0140677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"actin severing activator activity","termid":"GO:0000513"}


id: PR:Q9P3A9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp8 gene.","definition_xrefs":["UniProtKB:Q9P3A9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1565.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.05","synonyms":[{"name":"Spom972h-utp8","type":"exact"}],"termid":"PR:Q9P3A9"}


id: PBO:0004633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-1-phosphate guanyltransferase (predicted)","termid":"PBO:0004633"}


id: PBO:0078609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 63","termid":"PBO:0078609"}


id: MONDO:0010832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 3","secondary_identifiers":["OMIM:600151","MESH:C537911","DOID:0110125","UMLS:C1859564","MEDGEN:347179","GARD:822"],"synonyms":[{"name":"BBS3","type":"exact"},{"name":"Bardet-Biedl syndrome 3","type":"exact"},{"name":"Bardet-Biedl syndrome type 3","type":"exact"}],"termid":"MONDO:0010832","xrefs":{"Monarch":{"xref_id":"0010832"}}}


id: PBO:0066501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"raftlin family member 2","termid":"PBO:0066501"}


id: FYPO:0007985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which equatorial microtubule organizing center (eMTOC) assembly occurs earlier than normal. eMTOC assembly is the aggregation, arrangement and bonding together of a set of components to form an equatorial microtubule organizing center.","definition_xrefs":["PomBase:mlr","PMID:15068790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eMTOC assembly","termid":"FYPO:0005690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"early eMTOC assembly","termid":"FYPO:0007985"}


id: PBO:0000643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease (predicted)","termid":"PBO:0000643"}


id: PBO:0038569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding LIM protein family member 3","termid":"PBO:0038569"}


id: MONDO:0020817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"miliaria","termid":"MONDO:0006580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"miliaria vesiculosa","secondary_identifiers":["MEDGEN:590457","SCTID:201195008","UMLS:C0406495"],"termid":"MONDO:0020817","xrefs":{"Monarch":{"xref_id":"0020817"}}}


id: PBO:0080083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 45","termid":"PBO:0080083"}


id: PBO:0004866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine carboxypeptidase (predicted)","termid":"PBO:0004866"}


id: PBO:0072033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 3","termid":"PBO:0072033"}


id: GO:0032455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of a mature nerve growth factor (NGF) by proteolysis of a precursor.","definition_xrefs":["PMID:8615794","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"nerve growth factor processing","secondary_identifiers":["Reactome:R-HSA-167060"],"synonyms":[{"name":"NGF processing","type":"exact"},{"name":"beta-nerve growth factor processing","type":"exact"}],"termid":"GO:0032455"}


id: PBO:0049346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 4","termid":"PBO:0049346"}


id: MONDO:0100032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial temporal lobe epilepsy syndrome (obsolete MONDO:0100032)","termid":"MONDO:0100032","xrefs":{"Monarch":{"xref_id":"0100032"}}}


id: PBO:0113368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates the vacuolar V-ATPase; inhibits V1-ATPase activity and triggers ATP-dependent disassembly of the V-ATPase holoenzyme, counteracting the function of the RAVE complex; localizes to the cytoplasm; required for retention of the vacuolar-ATPase V0 domain subunit Stv1p in pre-vacuolar compartments; involved in resistance to oxidative damage; member of a conserved family of TLDc domain proteins found in eukaryotes; contains an N-terminal EF-hand-like domain","termid":"PBO:0113368"}


id: GO:0101024
data:
  {"annotated_genes":["SJAG_01745","SJAG_04464","SJAG_03449","SJAG_01050","SJAG_00416","SJAG_01242","SJAG_03892","SJAG_03073","SJAG_03783","SJAG_05207","SJAG_00900","SJAG_04489","SJAG_00680","SJAG_03891"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119576,119659,119705],"is_not":false,"summary":null,"term":"GO:0101024"},{"annotations":[101755,94178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140515"},{"annotations":[96296,103460,119638,119636,106877,91684,101208,119635,98282,119637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007084"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle process which results in the assembly, arrangement, or disassembly of the nuclear inner or outer membrane during mitosis.","definition_xrefs":["GOC:vw","PMID:15147872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00680":null,"SJAG_00900":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_03073":null,"SJAG_03449":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_04464":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"mitotic nuclear membrane organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21802294":null,"PMID:24184107":null,"PMID:28954740":null,"PMID:32243490":null},"synonyms":[{"name":"nuclear membrane organization involved in mitotic nuclear division","type":"exact"}],"termid":"GO:0101024","terms_by_termid":{"GO:0007084":null,"GO:0101024":null,"GO:0140515":null}}


id: FYPO:0007437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic spindle assembly checkpoint is activated continuously. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PomBase:mah","PMID:28017606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000298","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"constitutive activation of mitotic spindle assembly checkpoint","synonyms":[{"name":"constitutive activation of mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"constitutively activated of mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0007437"}


id: FYPO:0007223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the establishment of chromatin silencing at centromere outer repeat regions is decreased.","definition_xrefs":["PMID:31822915","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere outer repeat","termid":"FYPO:0002346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased establishment of chromatin silencing at centromere outer repeat region","synonyms":[{"name":"decreased establishment of chromatin silencing at centromere outer repeat at centromere otr during vegetative growth","type":"exact"},{"name":"decreased establishment of chromatin silencing at centromere outer repeat at centromeric outer repeat during vegetative growth","type":"exact"},{"name":"decreased establishment of chromatin silencing at centromere outer repeat at pericentric region during vegetative growth","type":"related"},{"name":"decreased establishment of chromatin silencing at centromere outer repeat at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased establishment of chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"reduced establishment of chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007223"}


id: MONDO:0043377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of chronic, inflammatory childhood diseases characterized by arthritis and enthesitis. This disorder can affect the axial skeleton in late childhood or young adulthood.","definition_xrefs":["NCIT:C114347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ankylosing spondylitis","termid":"MONDO:0005306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"juvenile spondyloarthropathy","secondary_identifiers":["MEDGEN:592564","UMLS:C0409676","SCTID:239806000"],"synonyms":[{"name":"JSpA","type":"exact"},{"name":"juvenile Spondyloarthritis","type":"exact"},{"name":"juvenile spondyloarthropathy","type":"exact"}],"termid":"MONDO:0043377","xrefs":{"Monarch":{"xref_id":"0043377"}}}


id: FYPO:0003486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the region of a chromosome at which a DNA double-strand break has occurred is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to double-strand break site","termid":"FYPO:0002473"},{"relation_name":"is_a","term_name":"abolished protein localization to chromosome during vegetative growth","termid":"FYPO:0002841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to double-strand break site","synonyms":[{"name":"abolished protein localisation to double-strand break site","type":"exact"},{"name":"abolished protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"abolished protein localization to site of double-strand break","type":"exact"},{"name":"protein localization to double-strand break site abolished","type":"exact"}],"termid":"FYPO:0003486"}


id: GO:0034546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4-dichloroaniline + 2 H+ + 2 e- = 4-chloroaniline + HCl.","definition_xrefs":["UM-BBD_reactionID:r0819"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4-dichloroaniline reductive dehalogenase activity (obsolete GO:0034546)","termid":"GO:0034546"}


id: PBO:0075997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP3 antisense RNA 1","termid":"PBO:0075997"}


id: GO:2000287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myotome development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of myotome development","termid":"GO:2000290"},{"relation_name":"positively_regulates","term_name":"myotome development","termid":"GO:0061055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myotome development","termid":"GO:2000287"}


id: GO:0035314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of hardened covering (a scab) at a wound site. The scab has multiple functions including limiting blood loss, providing structural stability to the wound and guarding against infection.","definition_xrefs":["GOC:bf","PMID:15269788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"scab formation","termid":"GO:0035314"}


id: GO:1900449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamate receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"glutamate receptor signaling pathway","termid":"GO:0007215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of glutamate receptor signaling pathway","synonyms":[{"name":"regulation of glutamate signaling pathway","type":"exact"},{"name":"regulation of glutamate signalling pathway","type":"exact"}],"termid":"GO:1900449"}


id: PBO:0065843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB10, member RAS oncogene family","termid":"PBO:0065843"}


id: PR:Q9Y7J6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7J6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.10c","synonyms":[{"name":"Spom972h-ppk21","type":"exact"}],"termid":"PR:Q9Y7J6"}


id: MONDO:0008810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperlipidemia","termid":"MONDO:0001336"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"familial chylomicronemia syndrome","termid":"MONDO:0018637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"familial apolipoprotein C-II deficiency","secondary_identifiers":["MEDGEN:328375","GARD:759","DOID:0111418","OMIM:207750","UMLS:C1720779","Orphanet:309020","icd11.foundation:877401371","SCTID:33513003"],"synonyms":[{"name":"Apoc2 deficiency","type":"related"},{"name":"C-II Anapolipoproteinemia","type":"related"},{"name":"apolipoprotein C-II deficiency","type":"related"},{"name":"familial apoC-II deficiency","type":"exact"},{"name":"familial apolipoprotein C-II deficiency","type":"exact"},{"name":"hyperlipoproteinemia, type 1B","type":"related"},{"name":"hyperlipoproteinemia, type IB","type":"exact"}],"termid":"MONDO:0008810","xrefs":{"Monarch":{"xref_id":"0008810"}}}


id: GO:0035564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of a kidney.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"part_of","term_name":"kidney morphogenesis","termid":"GO:0060993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of kidney size","termid":"GO:0035564"}


id: PBO:0057461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 580","termid":"PBO:0057461"}


id: MONDO:0023543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Katsantoni-Papadakou-Lagoyanni syndrome","secondary_identifiers":["UMLS:C2931394","MEDGEN:419400","MESH:C537012"],"synonyms":[{"name":"Katsantoni Papadakou Lagoyanni syndrome","type":"related"},{"name":"Trichodermal syndrome and intellectual disability","type":"related"},{"name":"Trichodermal syndrome and mental retardation","type":"related"}],"termid":"MONDO:0023543","xrefs":{"Monarch":{"xref_id":"0023543"}}}


id: SO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_2prime_O_dimethyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_2_prime_O_dimethyladenosine","secondary_identifiers":["RNAMOD:088"],"synonyms":[{"name":"N6 2 prime O dimethyladenosine","type":"exact"},{"name":"N6,2'-O-dimethyladenosine","type":"exact"},{"name":"m6Am","type":"exact"}],"termid":"SO:0001312"}


id: MONDO:0009585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"encephalopathy due to beta-mercaptolactate-cysteine disulfiduria","secondary_identifiers":["MEDGEN:208661","MESH:C563085","GARD:654","OMIM:249650","Orphanet:1035","UMLS:C0796055"],"synonyms":[{"name":"3-mercaptopyruvate sulfurtransferase deficiency","type":"exact"},{"name":"Ampola syndrome","type":"exact"},{"name":"Beta-mercaptolactate cysteine disulfiduria","type":"related"},{"name":"MCDU","type":"related"},{"name":"disulfiduria, mixed","type":"related"},{"name":"mercaptolactate-cysteine disulfiduria","type":"related"}],"termid":"MONDO:0009585","xrefs":{"Monarch":{"xref_id":"0009585"}}}


id: GO:0031166
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the vacuolar membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of vacuolar membrane (obsolete GO:0031166)","synonyms":[{"name":"integral to vacuolar membrane","type":"narrow"}],"termid":"GO:0031166"}


id: MONDO:0009929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary pulmonary alveolar proteinosis","termid":"MONDO:0012580"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant metabolism dysfunction, pulmonary, 1","secondary_identifiers":["OMIM:265120","Orphanet:217563","MEDGEN:368844","GARD:17126","UMLS:C1968602","MESH:C566882"],"synonyms":[{"name":"SMDP1","type":"exact"},{"name":"interstitial lung disease due to SP-B dysfunction","type":"exact"},{"name":"interstitial lung disease due to surfactant Protein B deficiency","type":"exact"},{"name":"interstitial lung disease, nonspecific, due to surfactant Protein B deficiency","type":"related"},{"name":"neonatal acute respiratory distress due to SP-B deficiency","type":"exact"},{"name":"neonatal acute respiratory distress due to surfactant protein B deficiency","type":"exact"},{"name":"pulmonary alveolar proteinosis, congenital, 1","type":"exact"},{"name":"pulmonary surfactant protein B, deficiency of","type":"related"},{"name":"surfactant metabolism dysfunction, pulmonary, 1","type":"exact"},{"name":"surfactant metabolism dysfunction, pulmonary, type 1","type":"exact"}],"termid":"MONDO:0009929","xrefs":{"Monarch":{"xref_id":"0009929"}}}


id: GO:0061203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the paramyosin-based thick filaments of myofibrils in striated muscle.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paramyosin filament assembly or disassembly","termid":"GO:0061204"},{"relation_name":"part_of","term_name":"myofibril assembly","termid":"GO:0030239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"striated muscle paramyosin thick filament assembly","termid":"GO:0061203"}


id: MONDO:0013737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, complex type of hereditary spastic paraplegia characterized by an onset, in infancy or childhood, of the typical signs of spastic paraplegia (i.e. spastic gait and weakness of the lower limbs) associated with a variety of additional manifestations including upper limb spasticity and weakness, pseudobulbar dysarthria, bladder dysfunction, cerebellar ataxia, cataracts, and cognitive impairment that can progress to dementia. Brain imaging may show thinning of the corpus callosum and mild atrophy of the cerebrum and cerebellum. SPG46 is due to mutations in the GBA2 gene (9p13.2) encoding non-lysosomal glucosylceramidase.","definition_xrefs":["Orphanet:320391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 46","secondary_identifiers":["DOID:0110798","GARD:17476","MEDGEN:473687","SCTID:723822009","OMIM:614409","UMLS:C2828721"],"synonyms":[{"name":"GBA2 autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"SPG46","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in GBA2","type":"exact"},{"name":"autosomal recessive spastic paraplegia 46","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 46","type":"exact"},{"name":"hereditary spastic paraplegia 46","type":"exact"},{"name":"hereditary spastic paraplegia type 46","type":"exact"},{"name":"spastic paraplegia 46, autosomal recessive","type":"related"}],"termid":"MONDO:0013737","xrefs":{"Monarch":{"xref_id":"0013737"}}}


id: PBO:0043299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 18 member A","termid":"PBO:0043299"}


id: PBO:0030172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_resolution_of_meiotic_recombination_intermediates_with_crossover_formation","termid":"PBO:0030172"}


id: GO:0032357
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73946],"is_not":false,"summary":null,"term":"GO:0032357"}]},"cv_name":"molecular_function","definition":"Binding to a DNA region containing an oxidized purine residue.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized DNA binding","termid":"GO:0032356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"oxidized purine DNA binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"oxidised purine DNA binding","type":"exact"},{"name":"oxidized purine base DNA binding","type":"exact"},{"name":"oxidized purine nucleobase DNA binding","type":"exact"}],"termid":"GO:0032357","terms_by_termid":{"GO:0032357":null}}


id: PBO:0061821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 11 Y-linked","termid":"PBO:0061821"}


id: PBO:0002562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc14","termid":"PBO:0002562"}


id: PATO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being confined or restricted to multiple locations.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-localised","synonyms":[{"name":"multi-focal","type":"exact"}],"termid":"PATO:0001791"}


id: PBO:0002170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ABC family iron transporter Atm1","termid":"PBO:0002170"}


id: PR:O36020
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug126 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 126 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.08","synonyms":[{"name":"Spom972h-mug126","type":"exact"}],"termid":"PR:O36020"}


id: MONDO:0958344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare closed dysraphism with stalk characterized by a dorsal midline dermal sinus tract lined by keratinizing stratified squamous epithelium extending to the the intrathecal space. Other components such as hair follicles and shafts, mesenchymal derivatives (blood vessels and fibrous tissue) and occasionally nerve fibers can be observed. Inflamed granulation tissue containing mixed neutrophils, plasma cells, lymphocytes, and histiocytes is consistently found in the tract. It can also be associated with an intradural dermoid cyst. This malformation is at risk to cause intrathecal infections (meningitis, empyema) that justify a prophylactic surgery.","definition_xrefs":["Orphanet:645188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysraphism with stalk","termid":"MONDO:0958259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"spinal dermal sinus","termid":"MONDO:0958344","xrefs":{"Monarch":{"xref_id":"0958344"}}}


id: PBO:0000682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase (predicted)","termid":"PBO:0000682"}


id: GO:0048297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching to IgA isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of isotype switching","termid":"GO:0045829"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgA isotypes","termid":"GO:0048296"},{"relation_name":"negatively_regulates","term_name":"isotype switching to IgA isotypes","termid":"GO:0048290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0010467","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"negative regulation of isotype switching to IgA isotypes","synonyms":[{"name":"down regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"down-regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"downregulation of isotype switching to IgA isotypes","type":"exact"},{"name":"inhibition of isotype switching to IgA isotypes","type":"narrow"},{"name":"negative regulation of class switch recombination to IgA isotypes","type":"exact"},{"name":"negative regulation of class switching to IgA isotypes","type":"exact"},{"name":"negative regulation of isotype switch recombination to IgA isotypes","type":"exact"}],"termid":"GO:0048297"}


id: GO:0016988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of binding to a transcription factor and stopping, preventing or reducing the rate of its transcriptional activity.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription initiation factor antagonist activity (obsolete GO:0016988)","synonyms":[{"name":"transcription initiation factor antagonist activity","type":"exact"},{"name":"transcriptional initiation factor antagonist activity","type":"exact"}],"termid":"GO:0016988"}


id: PBO:0072783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaffold attachment factor B","termid":"PBO:0072783"}


id: PBO:0113758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin-like histone chaperone/CENP-A amino terminus domain (NTD) isomerase Ani1/Fkbp39","termid":"PBO:0113758"}


id: PBO:0080654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE2 oocyte meiosis inhibiting kinase","termid":"PBO:0080654"}


id: MONDO:0020067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute infectious process that affects the brain tissue. It is usually caused by viruses and less often by bacteria, parasites, and fungi.","definition_xrefs":["NCIT:C79550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis","termid":"MONDO:0019956"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious encephalitis","secondary_identifiers":["ICD9:323.4","MESH:D000069544","MEDGEN:108917","ICD9:049.8","SCTID:312215006","UMLS:C0596773"],"synonyms":[{"name":"encephalitis infection","type":"exact"}],"termid":"MONDO:0020067","xrefs":{"Monarch":{"xref_id":"0020067"}}}


id: PBO:0069735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1016, pseudogene","termid":"PBO:0069735"}


id: PR:O94396
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pus1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.03","synonyms":[{"name":"Spom972h-pus1","type":"exact"},{"name":"tRNA pseudouridylate synthase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-uridine isomerase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94396"}


id: GO:1900433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to heat.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900430"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to heat","termid":"GO:1900431"},{"relation_name":"positively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to heat","termid":"GO:0036168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to heat","synonyms":[{"name":"activation of filamentous growth of a population of unicellular organisms in response to heat","type":"narrow"},{"name":"up regulation of filamentous growth of a population of unicellular organisms in response to heat","type":"exact"},{"name":"up-regulation of filamentous growth of a population of unicellular organisms in response to heat","type":"exact"},{"name":"upregulation of filamentous growth of a population of unicellular organisms in response to heat","type":"exact"}],"termid":"GO:1900433"}


id: MONDO:0004000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pilocytic astrocytoma that occurs during childhood.","definition_xrefs":["NCIT:C4048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood astrocytic tumor","termid":"MONDO:0002505"},{"relation_name":"is_a","term_name":"pilocytic astrocytoma","termid":"MONDO:0016691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood pilocytic astrocytoma","secondary_identifiers":["UMLS:C1332995","MEDGEN:232355","DOID:6812","NANDO:2200084"],"synonyms":[{"name":"childhood pilocytic astrocytoma","type":"exact"},{"name":"paediatric pilocytic astrocytoma","type":"exact"},{"name":"pediatric pilocytic astrocytoma","type":"exact"},{"name":"pilocytic astrocytoma","type":"broad"},{"name":"pilocytic astrocytoma of childhood","type":"exact"}],"termid":"MONDO:0004000","xrefs":{"Monarch":{"xref_id":"0004000"}}}


id: PATO:0001943
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A purple color which has low saturation and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lilac","termid":"PATO:0001943"}


id: PBO:0052420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kirre like nephrin family adhesion molecule 2","termid":"PBO:0052420"}


id: MONDO:0019135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete paracoccidioidomycosis (obsolete MONDO:0019135)","termid":"MONDO:0019135","xrefs":{"Monarch":{"xref_id":"0019135"}}}


id: PBO:0003775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf4 (predicted)","termid":"PBO:0003775"}


id: GO:0033470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gibberellin 12, (1R,2S,3S,4R,8S,9S,12R)-4,8-dimethyl-13-methylidenetetracyclo[10.2.1.01,9.03,8]pentadecane-2,4-dicarboxylic acid 1meta,4a-dimethyl-8-methylidene-4aalpha,4bbeta-gibbane-1alpha,10beta-dicarboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"},{"relation_name":"is_a","term_name":"gibberellin 12 metabolic process","termid":"GO:0033469"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"gibberellin 12 biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5034"],"synonyms":[{"name":"GA12 biosynthetic process","type":"exact"},{"name":"gibberellin 12 anabolism","type":"exact"},{"name":"gibberellin 12 biosynthesis","type":"exact"},{"name":"gibberellin 12 formation","type":"exact"},{"name":"gibberellin 12 synthesis","type":"exact"},{"name":"gibberellin A12 biosynthetic process","type":"exact"}],"termid":"GO:0033470"}


id: MONDO:0003628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the pulmonary valve.","direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve disorder","termid":"MONDO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pulmonary valve disorder","secondary_identifiers":["DOID:5749","NCIT:C78579","ICD9:424.3","MEDGEN:18767","SCTID:76267008","EFO:0009564","UMLS:C0034087"],"synonyms":[{"name":"disease of pulmonary valve","type":"exact"},{"name":"disease or disorder of pulmonary valve","type":"exact"},{"name":"disorder of pulmonary valve","type":"exact"},{"name":"pulmonary valve disease","type":"exact"},{"name":"pulmonary valve disease or disorder","type":"exact"},{"name":"pulmonary valve disorder","type":"exact"}],"termid":"MONDO:0003628","xrefs":{"Monarch":{"xref_id":"0003628"}}}


id: GO:1905549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of subtelomeric heterochromatin assembly.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:nc","GOC:TermGenie","GO_REF:0000058","PMID:25819580"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of subtelomeric heterochromatin assembly (obsolete GO:1905549)","synonyms":[{"name":"activation of telomeric heterochromatin assembly","type":"narrow"},{"name":"activation of telomeric heterochromatin formation","type":"narrow"},{"name":"positive regulation of telomeric heterochromatin assembly","type":"related"},{"name":"positive regulation of telomeric heterochromatin formation","type":"related"},{"name":"up regulation of telomeric heterochromatin assembly","type":"related"},{"name":"up regulation of telomeric heterochromatin formation","type":"related"},{"name":"up-regulation of telomeric heterochromatin assembly","type":"related"},{"name":"up-regulation of telomeric heterochromatin formation","type":"related"},{"name":"upregulation of telomeric heterochromatin assembly","type":"related"},{"name":"upregulation of telomeric heterochromatin formation","type":"related"}],"termid":"GO:1905549"}


id: MONDO:0016030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Evans syndrome is a rare chronic hematologic disorder characterized by the simultaneous or sequential association of autoimmune hemolytic anemia (AIHA; a disorder in which auto-antibodies are directed against red blood cells causing anemia of varying degrees of severity) with immune thrombocytopenic purpura (ITP; a coagulation disorder in which auto-antibodies are directed against platelets causing hemorrhagic episodes) and occasionally autoimmune neutropenia, in the absence of a known underlying etiology.","definition_xrefs":["Orphanet:1959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primary thrombocytopenia","termid":"MONDO:0004680"},{"relation_name":"is_a","term_name":"autoimmune thrombocytopenia","termid":"MONDO:0019098"},{"relation_name":"is_a","term_name":"autoimmune hemolytic anemia","termid":"MONDO:0020108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280","MONDO:0005046"],"is_obsolete":false,"name":"Evans syndrome","secondary_identifiers":["UMLS:C0272126","GARD:6389","MEDGEN:75773","NORD:1112","MESH:C536380","NCIT:C61284","icd11.foundation:1048228553","DOID:8931","ICD10CM:D69.41","MedDRA:10053873","NANDO:1200310","ICD9:287.32","SCTID:75331009"],"synonyms":[{"name":"Evan syndrome","type":"related"},{"name":"Evans' syndrome","type":"exact"},{"name":"autoimmune hemolytic anaemia and autoimmune thrombocytopenia","type":"exact"},{"name":"autoimmune hemolytic anemia and autoimmune thrombocytopenia","type":"exact"},{"name":"immune pancytopenia","type":"exact"}],"termid":"MONDO:0016030","xrefs":{"Monarch":{"xref_id":"0016030"}}}


id: PATO:0001219
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001219 area_unit (obsolete PATO:0001219)","termid":"PATO:0001219"}


id: PBO:0029084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_terbinafine","termid":"PBO:0029084"}


id: GO:0016664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["EC:1.7.7.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, iron-sulfur protein as acceptor","synonyms":[{"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016664"}


id: PBO:0070712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 17","termid":"PBO:0070712"}


id: MONDO:0014417
data:
  {"annotated_genes":["SJAG_02885","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86642,86643],"is_not":false,"summary":null,"term":"MONDO:0014417"}]},"cv_name":"mondo","definition":"Spinocerebellar ataxia type 38 (SCA38) is a subtype of autosomal dominant cerebellar ataxia type 3 characterized by the adult-onset (average age: 40 years) of truncal ataxia, gait disturbance and gaze-evoked nystagmus. The disease is slowly progressive with dysarthria and limb ataxia following. Additional manifestations include diplopia and axonal neuropathy.","definition_xrefs":["Orphanet:423296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005066","MONDO:0002525","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia type 38","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050985","GARD:12369","OMIM:615957","SCTID:734021001","UMLS:C4518337","MEDGEN:1379865"],"synonyms":[{"name":"SCA38","type":"exact"},{"name":"spinocerebellar ataxia 38","type":"related"},{"name":"spinocerebellar ataxia type 38","type":"exact"}],"termid":"MONDO:0014417","terms_by_termid":{"MONDO:0014417":null},"xrefs":{"Monarch":{"xref_id":"0014417"}}}


id: GO:1990104
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex that contains DNA in combination with a protein which binds to and bends DNA. Often plays a role in DNA compaction.","definition_xrefs":["GOC:bhm","PMID:17097674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA bending complex","synonyms":[{"name":"histone-like DNA binding complex","type":"narrow"}],"termid":"GO:1990104"}


id: GO:0048888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuromast mantle cell. Mantle cells are non-sensory cells that surround the sensory strip, separating the neuromast from the epidermis. Mantle cells secrete the cupula in which the ciliary bundles of all of the hair cells are embedded.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"neuromast development","termid":"GO:0048884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast mantle cell differentiation","termid":"GO:0048888"}


id: FYECO:0000125
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown to exponential phase.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to exponential phase","termid":"FYECO:0000125"}


id: GO:0055102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a lipase, an enzyme that catalyzes of the hydrolysis of a lipid.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"negatively_regulates","term_name":"lipase activity","termid":"GO:0016298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"negatively_regulates","termid":"GO:0016788"},{"rel_name":"negatively_regulates","termid":"GO:0016787"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"regulates","termid":"GO:0016788"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"negatively_regulates","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0004857","GO:0016788","GO:0098772","GO:0003674","GO:0140678","GO:0016787","GO:0003824","GO:0030234"],"is_obsolete":false,"name":"lipase inhibitor activity","termid":"GO:0055102"}


id: MONDO:0020741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxine-dependent epilepsy","termid":"MONDO:0009945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005027"],"is_obsolete":false,"name":"pyridoxine-dependent epilepsy caused by ALDH7A1 mutant","secondary_identifiers":["DOID:0070519","OMIM:266100"],"synonyms":[{"name":"AASA dehydrogenase deficiency","type":"related"},{"name":"EPD","type":"related"},{"name":"Epd","type":"related"},{"name":"epilepsy, pyridoxine-dependent","type":"related"},{"name":"pyridoxine dependency with seizures","type":"related"},{"name":"pyridoxine-dependent epilepsy","type":"related"},{"name":"pyridoxine-dependent epilepsy caused by ALDH7A1 mutant","type":"exact"}],"termid":"MONDO:0020741","xrefs":{"Monarch":{"xref_id":"0020741"}}}


id: GO:0043521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the disassembly of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"is_a","term_name":"regulation of myosin II filament organization","termid":"GO:0043519"},{"relation_name":"regulates","term_name":"myosin II filament disassembly","termid":"GO:0031037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"regulation of myosin II filament disassembly","termid":"GO:0043521"}


id: MONDO:0000146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progeroid syndrome (obsolete MONDO:0000146)","termid":"MONDO:0000146","xrefs":{"Monarch":{"xref_id":"0000146"}}}


id: PBO:0043844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPVL antisense RNA 2","termid":"PBO:0043844"}


id: PBO:0091747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter Sul1","termid":"PBO:0091747"}


id: PATO:0002093
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume quality inhering in a degenerating cell by virtue of the bearer's exhibiting an increase in volume associated with cytoplasmic abnormalities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased volume","termid":"PATO:0000595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ballooning","termid":"PATO:0002093"}


id: MONDO:0001158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an enduring pattern of inflexibility, extreme orderliness, and perfectionism which interfere with efficiency and which may manifest in many different contexts, including work and leisure activities, financial matters, and issues of morality or ethics.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"personality disorder","termid":"MONDO:0002028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obsessive-compulsive personality disorder","secondary_identifiers":["MEDGEN:40432","ICD10CM:F60.5","DOID:10932","SCTID:1376001","ICD9:301.4","MESH:D003193","NCIT:C92638","UMLS:C0009595"],"synonyms":[{"name":"OCD","type":"exact"},{"name":"OCPD","type":"exact"},{"name":"anankastic personality disorder","type":"related"},{"name":"obsessional personality","type":"related"}],"termid":"MONDO:0001158","xrefs":{"Monarch":{"xref_id":"0001158"}}}


id: PBO:0051034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGFL2 antisense RNA 1","termid":"PBO:0051034"}


id: PBO:0090514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi calcium and manganese antiporter Gdt1","termid":"PBO:0090514"}


id: MONDO:0006173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low-grade squamous cell carcinoma that arises from the conjunctiva. It is the most common primary malignant tumor that arises from the conjunctiva. It usually affects older white males. Excessive exposure to sunlight is a risk factor. Patients may present with a mass, red eye, or pain.","definition_xrefs":["NCIT:C4549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye carcinoma","termid":"MONDO:0002466"},{"relation_name":"is_a","term_name":"conjunctival cancer","termid":"MONDO:0003454"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"conjunctival squamous cell carcinoma","secondary_identifiers":["DOID:1748","SCTID:255003007","MEDGEN:87558","UMLS:C0346359","EFO:1000206"],"synonyms":[{"name":"conjunctiva epidermoid carcinoma","type":"exact"},{"name":"conjunctiva squamous cell carcinoma","type":"exact"},{"name":"conjunctival epidermoid carcinoma","type":"exact"},{"name":"conjunctival squamous cell cancer","type":"exact"},{"name":"conjunctival squamous cell carcinoma","type":"exact"},{"name":"epidermoid carcinoma of conjunctiva","type":"exact"},{"name":"epidermoid carcinoma of the conjunctiva","type":"exact"},{"name":"invasive squamous cell carcinoma of the conjunctiva","type":"exact"},{"name":"ocular surface squamous neoplasia","type":"broad"},{"name":"squamous cell carcinoma of conjunctiva","type":"exact"},{"name":"squamous cell carcinoma of the conjunctiva","type":"exact"}],"termid":"MONDO:0006173","xrefs":{"Monarch":{"xref_id":"0006173"}}}


id: MOD:01275
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS, and an L-lysine residue.","definition_xrefs":["PubMed:8597590","Unimod:276#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-[4-(2-aminoethyl)benzenesulfonyl]lysine","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01275"}


id: PATO:0005012
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer being fully formed compared to entities lacking parts.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complete structure","termid":"PATO:0005012"}


id: PR:Q09907
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endonuclease III-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10359:SF16","OMA:SCHPO00443","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease III homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.07","secondary_identifiers":["UniProtKB:Q09907"],"synonyms":[{"name":"DNA glycoslyase/AP lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NTHL1","type":"exact"},{"name":"bifunctional DNA N-glycoslyase/DNA-(apurinic or apyrimidinic site) lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09907"}


id: PBO:0066807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 106","termid":"PBO:0066807"}


id: SO:0001816
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that leads to the change of an amino acid within the protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"coding_variant_quality","termid":"SO:0001814"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_synonymous","synonyms":[{"name":"non synonymous","type":"related"}],"termid":"SO:0001816"}


id: PBO:0058034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4255","termid":"PBO:0058034"}


id: MONDO:0024276
data:
  {"annotated_genes":["SJAG_04067","SJAG_03677","SJAG_02049","SJAG_02231","SJAG_00440","SJAG_01151","SJAG_01144","SJAG_01970","SJAG_03453","SJAG_03787"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[86992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"},{"annotations":[86511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"},{"annotations":[87129,87130,87131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007763"},{"annotations":[86231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012004"},{"annotations":[86208,87650,87651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00440":null,"SJAG_01144":null,"SJAG_01151":null,"SJAG_01970":null,"SJAG_02049":null,"SJAG_02231":null,"SJAG_03453":null,"SJAG_03677":null,"SJAG_03787":null,"SJAG_04067":null},"genotype_count":0,"is_obsolete":false,"name":"glandular cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C7132","HP:0031493","MEDGEN:64458","UMLS:C0205854"],"synonyms":[{"name":"glandular cell epithelial neoplasm","type":"exact"},{"name":"glandular cell epithelium neoplasm","type":"exact"},{"name":"glandular cell neoplasm","type":"exact"},{"name":"glandular cell tumor","type":"exact"},{"name":"glandular cell tumour","type":"exact"}],"termid":"MONDO:0024276","terms_by_termid":{"MONDO:0003789":null,"MONDO:0007256":null,"MONDO:0007763":null,"MONDO:0008566":null,"MONDO:0012004":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0024276"}}}


id: MONDO:0005881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lower than normal quantity of amniotic fluid in the amniotic sac as compared to normal values. Typically associated with an amniotic fluid index (AFI) of less than 5 cm or a single maximum vertical pocket (MVP) of less than 2 cm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligohydramnios","secondary_identifiers":["UMLS:C0079924","DOID:12215","HP:0001562","ICD9:658.00","MEDGEN:86974","icd11.foundation:262953341","EFO:0007401","ICD9:658.0","MESH:D016104","SCTID:59566000"],"synonyms":[{"name":"antepartum oligohydramnios","type":"exact"},{"name":"delivered oligohydramnios","type":"exact"},{"name":"oligohydramnios","type":"exact"},{"name":"oligohydramnios (disease)","type":"exact"},{"name":"oligohydramnios - delivered","type":"exact"}],"termid":"MONDO:0005881","xrefs":{"Monarch":{"xref_id":"0005881"}}}


id: GO:0003041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the molecular signal from a carotid body is relayed to the vasomotor center, causing it to signal an increase arterial pressure.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitation of vasomotor center by chemoreceptor signaling","termid":"GO:0002008"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by carotid body chemoreceptor signaling","termid":"GO:0003027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"excitation of vasomotor center by carotid body chemoreceptor signaling","synonyms":[{"name":"excitation of vasomotor center by carotid body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003041"}


id: PBO:0089382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GAP Gyp51","termid":"PBO:0089382"}


id: PBO:0090704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp6","termid":"PBO:0090704"}


id: GO:0044027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic gene regulation mechanism that negatively regulates gene expression by methylation of cytosine residues in chromosomal CpG islands. CpG islands are genomic regions that contain a high frequency of the CG dinucleotide associated with the transcription start site of genes.","definition_xrefs":["PMID:11898023","Wikipedia:Cpg_island"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression, epigenetic","termid":"GO:0045814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gene expression via chromosomal CpG island methylation","synonyms":[{"name":"DNA hypermethylation of CG island","type":"related"},{"name":"DNA hypermethylation of CpG island","type":"exact"},{"name":"epigenetic regulation of gene expression via CpG island hypermethylation","type":"exact"},{"name":"hypermethylation of CpG island","type":"exact"},{"name":"maintenance of DNA methylation","type":"broad"},{"name":"negative regulation of gene expression via CpG island hypermethylation","type":"exact"},{"name":"negative regulation of gene expression via CpG island methylation","type":"related"},{"name":"negative regulation of gene expression via chromosomal CG dinucleotide methylation","type":"related"},{"name":"negative regulation of gene expression via chromosomal CpG dinucleotide methylation","type":"exact"},{"name":"negative regulation of gene expression via chromosomal DNA cytosine methylation","type":"exact"}],"termid":"GO:0044027"}


id: PATO:0002428
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape with three supports or legs.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripodal","termid":"PATO:0002428"}


id: PBO:0006180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_substance","termid":"PBO:0006180"}


id: GO:1902117
data:
  {"annotated_genes":["SJAG_01837","SJAG_00718","SJAG_02332","SJAG_05289","SJAG_03048","SJAG_03851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108875,108965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[89991,116975,102690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[111744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of organelle assembly.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"positively_regulates","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_02332":null,"SJAG_03048":null,"SJAG_03851":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of organelle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of organelle assembly","type":"narrow"},{"name":"up regulation of organelle assembly","type":"exact"},{"name":"up-regulation of organelle assembly","type":"exact"},{"name":"upregulation of organelle assembly","type":"exact"}],"termid":"GO:1902117","terms_by_termid":{"GO:0110161":null,"GO:1905561":null,"GO:2000786":null}}


id: GO:0044346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a fibroblast, a connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis","GOC:yaf","CL:0000057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast apoptotic process","synonyms":[{"name":"fibroblast apoptosis","type":"narrow"}],"termid":"GO:0044346"}


id: MONDO:0009561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-mannosidosis is an inherited lysosomal storage disorder characterized by immune deficiency, facial and skeletal abnormalities, hearing impairment, and intellectual deficit.","definition_xrefs":["Orphanet:61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"oligosaccharidosis","termid":"MONDO:0019251"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002561","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"alpha-mannosidosis","secondary_identifiers":["icd11.foundation:1944256516","GARD:6968","NCIT:C84548","DOID:3413","SCTID:65524005","MEDGEN:7467","UMLS:C0024748","NANDO:1200126","ICD9:271.8","OMIM:248500","NORD:755","MESH:D008363"],"synonyms":[{"name":"Alpha mannosidase B deficiency","type":"related"},{"name":"Alpha-D-mannosidosis","type":"exact"},{"name":"Alpha-mannosidase B deficiency","type":"related"},{"name":"MANSA","type":"related"},{"name":"alpha-mannosidase deficiency","type":"exact"},{"name":"alpha-mannosidosis","type":"exact"},{"name":"deficiency of alpha-mannosidase","type":"exact"},{"name":"lysosomal Alpha-D-mannosidase deficiency","type":"related"},{"name":"lysosomal alpha-D-mannosidase deficiency","type":"exact"},{"name":"mannosidosis, ALPHA B, lysosomal","type":"related"},{"name":"mannosidosis, alpha B lysosomal","type":"related"},{"name":"mannosidosis, alpha-, types I and II","type":"exact"}],"termid":"MONDO:0009561","xrefs":{"Monarch":{"xref_id":"0009561"}}}


id: PBO:0055906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 30","termid":"PBO:0055906"}


id: PBO:0081352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 174","termid":"PBO:0081352"}


id: MOD:00245
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks a glycine residue and an L-serine residue to form glycine oxazole-4-carboxylic acid.","definition_xrefs":["PubMed:8183941","RESID:AA0240","PubMed:8895467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine oxazole-4-carboxylic acid","synonyms":[{"name":"2-aminomethyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-azanylmethyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Oxazole-4-carboxylic acid (Gly-Ser)","type":"exact"},{"name":"glycine oxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00245"}


id: GO:0060594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the mammary line is specified. The mammary line is a ridge of epidermal cells that will form the mammary placodes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"is_a","term_name":"mammary gland formation","termid":"GO:0060592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland specification","synonyms":[{"name":"mammary line specification","type":"related"}],"termid":"GO:0060594"}


id: MONDO:0013188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dysequilibrium syndrome in which the cause of the disease is a mutation in the CA8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, intellectual disability, and dysequilibrium","termid":"MONDO:0009133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome 3","secondary_identifiers":["MEDGEN:442496","GARD:15634","DOID:0070558","OMIM:613227","UMLS:C2750509","MESH:C567690"],"synonyms":[{"name":"CA8 dysequilibrium syndrome","type":"exact"},{"name":"CAMRQ3","type":"related"},{"name":"cerebellar ataxia and intellectual disability with or without quadrupedal locomotion 3","type":"related"},{"name":"cerebellar ataxia and mental retardation with or without quadrupedal locomotion 3","type":"related"},{"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome 3","type":"exact"},{"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome type 3","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium syndrome 3","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium syndrome type 3","type":"exact"},{"name":"dysequilibrium syndrome caused by mutation in CA8","type":"exact"}],"termid":"MONDO:0013188","xrefs":{"Monarch":{"xref_id":"0013188"}}}


id: GO:2000629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of miRNA metabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of miRNA metabolic process","termid":"GO:2000628"},{"relation_name":"negatively_regulates","term_name":"miRNA metabolic process","termid":"GO:0010586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA metabolic process","synonyms":[{"name":"negative regulation of microRNA metabolic process","type":"exact"}],"termid":"GO:2000629"}


id: GO:2000164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in outflow tract morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in outflow tract morphogenesis (obsolete GO:2000164)","termid":"GO:2000164"}


id: MONDO:0968947
data:
  {"annotated_genes":["SJAG_04936"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87512],"is_not":false,"summary":null,"term":"MONDO:0968947"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04936":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder plus optic atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5935605","MEDGEN:1859522","OMIM:620784"],"termid":"MONDO:0968947","terms_by_termid":{"MONDO:0968947":null},"xrefs":{"Monarch":{"xref_id":"0968947"}}}


id: PBO:0058138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4436a","termid":"PBO:0058138"}


id: MONDO:1012663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dwarfism that occurs in cattle due to a mutation in the ACAN gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, ACAN-related, cattle","secondary_identifiers":["OMIA:001271-9913"],"synonyms":[{"name":"bulldog calf malformation","type":"related"}],"termid":"MONDO:1012663","xrefs":{"Monarch":{"xref_id":"1012663"}}}


id: MOD:00074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to N-methyl-L-phenylalanine.","definition_xrefs":["PubMed:413571","PubMed:2577730","RESID:AA0065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated phenylalanine","termid":"MOD:01063"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-phenylalanine","synonyms":[{"name":"(2S)-2-methylamino-3-phenylpropanoic acid","type":"exact"},{"name":"MOD_RES N-methylphenylalanine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-phenylalanine","type":"exact"},{"name":"N-methylated L-phenylalanine","type":"exact"},{"name":"N-methylphenylalanine","type":"exact"},{"name":"NMe1Phe","type":"exact"}],"termid":"MOD:00074"}


id: MONDO:0013167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Parkinson disease","termid":"MONDO:0005180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkinson disease 16","secondary_identifiers":["OMIM:613164","UMLS:C2751012","MEDGEN:442620","MESH:C567726"],"synonyms":[{"name":"PARK16","type":"exact"},{"name":"Parkinson disease 16","type":"related"}],"termid":"MONDO:0013167","xrefs":{"Monarch":{"xref_id":"0013167"}}}


id: PBO:0086426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative hexokinase; transcript is upregulated during sporulation and the unfolded protein response; YLR446W is not an essential gene","termid":"PBO:0086426"}


id: GO:0006116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A metabolic process that results in the oxidation of reduced nicotinamide adenine dinucleotide, NADH, to the oxidized form, NAD+.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete NADH oxidation (obsolete GO:0006116)","synonyms":[{"name":"NAD (reduced) dehydrogenation","type":"exact"},{"name":"NAD (reduced) oxidation","type":"exact"},{"name":"NADH dehydrogenation","type":"exact"},{"name":"reduced NAD dehydrogenation","type":"exact"},{"name":"reduced NAD oxidation","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide dehydrogenation","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide oxidation","type":"exact"}],"termid":"GO:0006116"}


id: MONDO:0010174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Valinemia is a very rare metabolic disorder characterized by abnormally high levels of the amino acid valine in the blood and urine.Infants with valinemia reportedly experience lack of appetite, vomiting, and failure to thrive. In some cases, the condition may be life-threatening. Low muscle tone (hypotonia), excessive drowsiness, hyperactivity, and developmental delay have also been reported. Valinemia is caused by a deficiency of the enzymevaline transaminase, which is needed for the breakdown (metabolism) of valine in the body. It is inherited in an autosomal recessive manner, although the gene responsible for the condition is not yet known. Treatment includes adiet low in valine (introduced during early infancy) which usually improves symptoms and brings valine levels to normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Valinemia","secondary_identifiers":["UMLS:C0268573","SCTID:47719001","OMIM:277100","MESH:C536524","MEDGEN:120652"],"synonyms":[{"name":"Valinemia","type":"exact"},{"name":"hypervalinemia","type":"related"},{"name":"valine transaminase deficiency","type":"related"}],"termid":"MONDO:0010174","xrefs":{"Monarch":{"xref_id":"0010174"}}}


id: PBO:0003729
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoregulation","termid":"PBO:0003729"}


id: MONDO:0010591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fingerprint body myopathy is a congenital benign muscle disorder characterized by congenital hypotonia and weakness and by the presence of numerous fingerprint bodies located at the periphery of the muscle fibers. Prevalence is unknown. Less than 20 patients have been described. Few sporadic cases have been observed, as well as cases of recessive transmission.","definition_xrefs":["Orphanet:97232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"fingerprint body myopathy","secondary_identifiers":["MESH:C564425","GARD:12720","icd11.foundation:1251733531","MEDGEN:337026","OMIM:305550","UMLS:C1844560"],"synonyms":[{"name":"fingerprint body myopathy","type":"exact"}],"termid":"MONDO:0010591","xrefs":{"Monarch":{"xref_id":"0010591"}}}


id: PBO:0050035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 3","termid":"PBO:0050035"}


id: PBO:0066392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor accessory protein 2","termid":"PBO:0066392"}


id: GO:0033811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaroyl-CoA + a flavonol 3-O-[beta-D-glucosyl-(1->2)-beta-D-glucosyl-(1->2)-beta-D-glucoside] = CoA + a flavonol 3-O-[6-(4-coumaroyl)-beta-D-glucosyl-(1->2)-beta-D-glucosyl-(1->2)-beta-D-glucoside].","definition_xrefs":["EC:2.3.1.173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"flavonol-3-O-triglucoside O-coumaroyltransferase activity","secondary_identifiers":["RHEA:22160","MetaCyc:2.3.1.173-RXN"],"synonyms":[{"name":"4-coumaroyl-CoA:flavonol-3-O-[beta-D-glucosyl-(1->2)-beta-D-glucosyl-(1->2)-beta-D-glucoside] 6'''-O-4-coumaroyltransferase activity","type":"related"}],"termid":"GO:0033811"}


id: GO:2000109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"regulates","term_name":"macrophage apoptotic process","termid":"GO:0071888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage apoptotic process","synonyms":[{"name":"regulation of AICD","type":"related"},{"name":"regulation of activation-induced cell death","type":"related"},{"name":"regulation of macrophage apoptosis","type":"narrow"}],"termid":"GO:2000109"}


id: MONDO:0017343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Epstein-Barr virus-related tumor","termid":"MONDO:0017342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein-Barr virus-associated malignant lymphoproliferative disorder","secondary_identifiers":["UMLS:C2363744","MEDGEN:797800","Orphanet:289644","MedDRA:10068349","GARD:21147"],"synonyms":[{"name":"EBV-associated lymphoproliferative disorder","type":"exact"}],"termid":"MONDO:0017343","xrefs":{"Monarch":{"xref_id":"0017343"}}}


id: PBO:0092018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Leucine (uaa), mitochondrial","termid":"PBO:0092018"}


id: GO:0045466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of the R7 photoreceptor.","definition_xrefs":["PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R7 cell differentiation","termid":"GO:0045466"}


id: PBO:0069548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 819, pseudogene","termid":"PBO:0069548"}


id: GO:0002552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a mast cell or group of mast cells.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin secretion involved in inflammatory response","termid":"GO:0002442"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"mast cell degranulation","termid":"GO:0043303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"serotonin secretion by mast cell","synonyms":[{"name":"serotonin release by mast cell","type":"related"}],"termid":"GO:0002552"}


id: PBO:0050364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 67","termid":"PBO:0050364"}


id: PBO:0017015
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Orc4 binding footprint at replication origins is extended in G1 in the presence of Cdc1 and the MCM complex","termid":"PBO:0017015"}


id: GO:0015614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + D-xylose(out) = ADP + phosphate + D-xylose(in).","definition_xrefs":["RHEA:29899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-xylose transmembrane transporter activity","termid":"GO:0015148"},{"relation_name":"is_a","term_name":"ABC-type monosaccharide transporter activity","termid":"GO:0015407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type D-xylose transporter activity","secondary_identifiers":["MetaCyc:ABC-33-RXN","EC:7.5.2.10"],"synonyms":[{"name":"ATPase-coupled D-xylose transmembrane transporter activity","type":"related"},{"name":"D-xylose porter activity","type":"broad"},{"name":"D-xylose-importing ATPase activity","type":"related"}],"termid":"GO:0015614"}


id: MONDO:1011414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vestibular disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder, non-human animal","termid":"MONDO:1011301"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease, non-human animal","termid":"MONDO:1011342"},{"relation_name":"is_a","term_name":"perceptual disorders, non-human animal","termid":"MONDO:1011343"},{"relation_name":"is_a","term_name":"neuromuscular disease, non-human animal","termid":"MONDO:1012983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibular disease, non-human animal","secondary_identifiers":["OMIA:002263"],"termid":"MONDO:1011414","xrefs":{"Monarch":{"xref_id":"1011414"}}}


id: PBO:0043565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VI alpha 3 chain","termid":"PBO:0043565"}


id: PBO:0039409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 13","termid":"PBO:0039409"}


id: PBO:0089932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA-binding protein","termid":"PBO:0089932"}


id: PBO:0089920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (adenine) methyltransferase activity Bmt2","termid":"PBO:0089920"}


id: RO:0002005
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"innervated_by","termid":"RO:0002005"}


id: PBO:0001610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial valine-tRNA ligase Vrs2/Vas2","termid":"PBO:0001610"}


id: MONDO:0009102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaminopentanuria","secondary_identifiers":["MESH:C565630","OMIM:222350","UMLS:C1857285","MEDGEN:347412"],"synonyms":[{"name":"Diaminopentanuria","type":"exact"},{"name":"cystine-lysinuria","type":"related"}],"termid":"MONDO:0009102","xrefs":{"Monarch":{"xref_id":"0009102"}}}


id: PBO:0075974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroidogenic acute regulatory protein pseudogene 1","termid":"PBO:0075974"}


id: GO:1901266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cephalosporin C.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"cephalosporin metabolic process","termid":"GO:0043645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"cephalosporin C metabolic process","synonyms":[{"name":"cephalosporin C metabolism","type":"exact"}],"termid":"GO:1901266"}


id: GO:0006475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acetyl group to a non-terminal amino acid in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"internal protein amino acid acetylation","termid":"GO:0006475"}


id: GO:0106339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cytidine(32) in tRNA + S-adenosyl-L-methionine = 2'-O-methylcytidine(32) in tRNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:25404562"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (cytidine(32)-2'-O)-methyltransferase activity (obsolete GO:0106339)","synonyms":[{"name":"tRNA (cytidine 32-2'-O)-methyltransferase activity","type":"exact"}],"termid":"GO:0106339"}


id: GO:0006686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingomyelin metabolic process","termid":"GO:0006684"},{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphingomyelin biosynthetic process","synonyms":[{"name":"sphingomyelin anabolism","type":"exact"},{"name":"sphingomyelin biosynthesis","type":"exact"},{"name":"sphingomyelin formation","type":"exact"},{"name":"sphingomyelin synthesis","type":"exact"}],"termid":"GO:0006686"}


id: MONDO:0004659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a eye.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye carcinoma","termid":"MONDO:0002466"},{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"eye carcinoma in situ","secondary_identifiers":["SCTID:92590009","UMLS:C0154094","DOID:8792","ICD9:234.0","MEDGEN:509519"],"synonyms":[{"name":"carcinoma in situ of eye","type":"exact"},{"name":"carcinoma in situ of eyeball of camera-type eye","type":"exact"},{"name":"eye in situ carcinoma","type":"exact"},{"name":"eyeball of camera-type eye carcinoma in situ","type":"exact"},{"name":"stage 0 eye carcinoma","type":"exact"},{"name":"stage 0 eyeball of camera-type eye carcinoma","type":"exact"}],"termid":"MONDO:0004659","xrefs":{"Monarch":{"xref_id":"0004659"}}}


id: FYPO:0000108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to menadione. Cells stop growing (and may die) at a concentration of menadione that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to menadione","synonyms":[{"name":"hypersensitive to menadione","type":"exact"},{"name":"sensitive to menadione during mitotic cell cycle","type":"related"},{"name":"sensitive to menadione during vegetative growth","type":"exact"},{"name":"sensitive to vitamin K3","type":"related"}],"termid":"FYPO:0000108"}


id: PBO:0029489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_abnormal_cell_shape,_normal_cell_size_(obsolete_FYPO:0002226)","termid":"PBO:0029489"}


id: PBO:0060992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHERF family PDZ scaffold protein 4","termid":"PBO:0060992"}


id: GO:0002312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature B cell during an immune response, resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation involved in immune response","termid":"GO:0002285"},{"relation_name":"is_a","term_name":"B cell activation","termid":"GO:0042113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell activation involved in immune response","synonyms":[{"name":"B cell activation during immune response","type":"related"},{"name":"B lymphocyte activation during immune response","type":"related"},{"name":"B-cell activation during immune response","type":"related"},{"name":"B-lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002312"}


id: PBO:0087610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the COMPASS (Set1C) complex; COMPASS methylates lysine 4 of histone H3 and is required in chromatin silencing at telomeres; contains a Dpy-30 domain that mediates interaction with Bre2p; similar to C. elegans and human DPY-30","termid":"PBO:0087610"}


id: PBO:0029011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromosome_during_vegetative_growth","termid":"PBO:0029011"}


id: MONDO:0005375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the nasopharynx. Representative examples of benign neoplasms include angiofibroma and squamous papilloma. Representative examples of malignant neoplasms include keratinizing squamous cell carcinoma and nonkeratinizing carcinoma.","definition_xrefs":["NCIT:C3257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasopharyngeal disorder","termid":"MONDO:0004821"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"respiratory tract neoplasm","termid":"MONDO:0020641"},{"relation_name":"is_a","term_name":"pharynx neoplasm","termid":"MONDO:0021246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasopharyngeal neoplasm","secondary_identifiers":["SCTID:126680004","UMLS:C0027439","EFO:0004252","MEDGEN:6526","MONDO:0021362","MESH:D009303"],"synonyms":[{"name":"nasopharyngeal neoplasms","type":"exact"},{"name":"nasopharyngeal tumor","type":"exact"},{"name":"nasopharyngeal tumour","type":"exact"},{"name":"nasopharynx neoplasm","type":"exact"},{"name":"nasopharynx neoplasm (disease)","type":"exact"},{"name":"nasopharynx tumor","type":"exact"},{"name":"nasopharynx tumour","type":"exact"},{"name":"neoplasm of nasopharynx","type":"exact"},{"name":"neoplasm of the nasopharynx","type":"exact"},{"name":"tumor of nasopharynx","type":"exact"},{"name":"tumor of the nasopharynx","type":"exact"},{"name":"tumour of nasopharynx","type":"exact"},{"name":"tumour of the nasopharynx","type":"exact"}],"termid":"MONDO:0005375","xrefs":{"Monarch":{"xref_id":"0005375"}}}


id: MONDO:0005274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0005274 (obsolete MONDO:0005274)","termid":"MONDO:0005274","xrefs":{"Monarch":{"xref_id":"0005274"}}}


id: GO:1904947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which folic acid is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["PMID:15140890","GOC:rph","GOC:BHF","GOC:TermGenie","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folate transmembrane transport","termid":"GO:0098838"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"folate import into mitochondrion","synonyms":[{"name":"folic acid import into mitochondrion","type":"related"}],"termid":"GO:1904947"}


id: PBO:0029373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_medial_cortex_during_vegetative_growth,_with_protein_distributed_in_non-growing_half_of_cell","termid":"PBO:0029373"}


id: GO:0043293
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit protein complex involved in the signaling phase of the apoptotic process. In mammals it is typically composed of seven Apaf-1 subunits bound to cytochrome c and caspase-9. A similar complex to promote apoptosis is formed from homologous gene products in other eukaryotic organisms.","definition_xrefs":["PMID:15189137","PMID:10428850","GOC:mtg_apoptosis","PMID:11406413","PMID:12176339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005829","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"apoptosome","secondary_identifiers":["Wikipedia:Apoptosome"],"termid":"GO:0043293"}


id: GO:0044348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, which forms part of the cell wall.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"},{"relation_name":"is_a","term_name":"plant-type cell wall cellulose metabolic process","termid":"GO:0052541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"plant-type cell wall cellulose catabolic process","synonyms":[{"name":"plant-type cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:0044348"}


id: GO:0090369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of ornithine carbamoyltransferase.","definition_xrefs":["GOC:tb","GOC:jp","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"negatively_regulates","term_name":"ornithine carbamoyltransferase activity","termid":"GO:0004585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"negatively_regulates","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"regulates","termid":"GO:0016740"},{"rel_name":"negatively_regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"negatively_regulates","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0016741","GO:0030234","GO:0003824","GO:0004857","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"ornithine carbamoyltransferase inhibitor activity","termid":"GO:0090369"}


id: PBO:0043415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic nucleotide binding domain containing 1","termid":"PBO:0043415"}


id: PBO:0082451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2H2-type zinc finger protein required for ribosome assembly; shuttling factor which associates with pre-60S particles in the nucleus, accompanying them to the cytoplasm; cytoplasmic dissociation of Bud20p requires Drg1p; N-terminus harbors a nuclear localization signal (NLS) and a nuclear export signal (NES); cytoplasmic Bud20p is reimported by Kap123-dependent pathway; involved in bud-site selection; diploid mutants display a random budding pattern; similar to human ZNF593","termid":"PBO:0082451"}


id: FYPO:0006486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4,5)P3 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"}],"termid":"FYPO:0006486"}


id: MOD:01238
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-lysine residue with 4-hydroxynonenal.","definition_xrefs":["PubMed:11327326","PubMed:15133838","PubMed:9629898","Unimod:53#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxynonenal adduct","termid":"MOD:00446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"lysine 4-hydroxynonenal adduct","synonyms":[{"name":"4-hydroxynonenal (HNE)","type":"related"},{"name":"HNE","type":"related"}],"termid":"MOD:01238"}


id: GO:0060215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A first transient wave of blood cell production that, in vertebrates, gives rise to erythrocytes (red blood cells) and myeloid cells.","definition_xrefs":["GOC:dph","GOC:bf","PMID:15617691","PMID:15378083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic hemopoiesis","termid":"GO:0035162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primitive hemopoiesis","synonyms":[{"name":"primitive haematopoiesis","type":"exact"},{"name":"primitive haemopoiesis","type":"exact"},{"name":"primitive hematopoiesis","type":"related"}],"termid":"GO:0060215"}


id: MONDO:0800324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 8","secondary_identifiers":["UMLS:C3540845","MEDGEN:761921"],"synonyms":[{"name":"MCOPCB8","type":"exact"}],"termid":"MONDO:0800324","xrefs":{"Monarch":{"xref_id":"0800324"}}}


id: GO:0021975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the pons towards target cells in the spinal cord.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons reticulospinal tract morphogenesis","termid":"GO:0021975"}


id: PATO:0002422
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Pertaining to the individual parts making up an aggregate fruit like a many-lobed \\\"berry,\\\" such as a raspberry.","definition_xrefs":["wikipedia:https://en.wikipedia.org/wiki/Acinus"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acinar","termid":"PATO:0002422"}


id: PBO:0029794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_actin_cable_retrograde_transport","termid":"PBO:0029794"}


id: GO:1905064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:rph","PMID:19088079","GOC:BHF_miRNA","GO_REF:0000058","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell differentiation","termid":"GO:0051151"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905063"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell differentiation","synonyms":[{"name":"down regulation of VSMC differentiation","type":"exact"},{"name":"down regulation of vascular associated smooth muscle cell differentiation","type":"exact"},{"name":"down regulation of vascular smooth muscle cell differentiation","type":"exact"},{"name":"down-regulation of VSMC differentiation","type":"exact"},{"name":"down-regulation of vascular associated smooth muscle cell differentiation","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell differentiation","type":"exact"},{"name":"downregulation of VSMC differentiation","type":"exact"},{"name":"downregulation of vascular associated smooth muscle cell differentiation","type":"exact"},{"name":"downregulation of vascular smooth muscle cell differentiation","type":"exact"},{"name":"inhibition of VSMC differentiation","type":"narrow"},{"name":"inhibition of vascular associated smooth muscle cell differentiation","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell differentiation","type":"narrow"},{"name":"negative regulation of VSMC differentiation","type":"exact"},{"name":"negative regulation of vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:1905064"}


id: GO:0009611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to wounding","secondary_identifiers":["GO:0002245"],"synonyms":[{"name":"physiological response to wounding","type":"exact"}],"termid":"GO:0009611"}


id: PATO:0001875
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having three angles.","definition_xrefs":["wordreference:wordreference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triangular","synonyms":[{"name":"delta shaped","type":"related"},{"name":"deltoid","type":"exact"},{"name":"triangle","type":"related"},{"name":"triangle-shaped","type":"related"}],"termid":"PATO:0001875"}


id: GO:0016496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with substance P, the peptide Arg-Pro-Lys-Pro-Gln-Gln-Phe-Phe-Gly-Leu-Met, to initiate a change in cell activity.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tachykinin receptor activity","termid":"GO:0004995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"substance P receptor activity","termid":"GO:0016496"}


id: GO:0005464
data:
  {"annotated_genes":["SJAG_00434"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77957],"is_not":false,"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of UDP-xylose from one side of a membrane to the other. UDP-xylose is a substance composed of xylose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"UDP-xylose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-742373"],"termid":"GO:0005464","terms_by_termid":{"GO:0005464":null}}


id: GO:0009438
data:
  {"annotated_genes":["SJAG_04726","SJAG_02106","SJAG_02988","SJAG_04674","SJAG_02960","SJAG_01596","SJAG_04404"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73289,61047,74832,103108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[59284,61046,105369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylglyoxal, CH3-CO-CHO, the aldehyde of pyruvic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methylglyoxal metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"methylglyoxal bypass","type":"narrow"},{"name":"methylglyoxal metabolism","type":"exact"},{"name":"methylglyoxal pathway","type":"narrow"}],"termid":"GO:0009438","terms_by_termid":{"GO:0019243":null,"GO:0061727":null}}


id: GO:1904414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac ventricle development.","definition_xrefs":["PMID:19590510","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of cardiac ventricle development","termid":"GO:1904412"},{"relation_name":"positively_regulates","term_name":"cardiac ventricle development","termid":"GO:0003231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac ventricle development","synonyms":[{"name":"activation of cardiac ventricle development","type":"narrow"},{"name":"up regulation of cardiac ventricle development","type":"exact"},{"name":"up-regulation of cardiac ventricle development","type":"exact"},{"name":"upregulation of cardiac ventricle development","type":"exact"}],"termid":"GO:1904414"}


id: PBO:0046277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EQTN MOB3B IFNK C9orf72 enhancer RNA I","termid":"PBO:0046277"}


id: GO:0015288
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of substances, sized less than 1000 Da, from one side of a membrane to the other. The transmembrane portions of porins consist exclusively of beta-strands which form a beta-barrel. They are found in the outer membranes of Gram-negative bacteria, mitochondria, plastids and possibly acid-fast Gram-positive bacteria.","definition_xrefs":["PMID:10839820","TC:1.B.1.-.-","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wide pore channel activity","termid":"GO:0022829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"porin activity","secondary_identifiers":["Wikipedia:Porin_(protein)"],"synonyms":[{"name":"outer membrane exporter porin","type":"narrow"},{"name":"porin","type":"exact"}],"termid":"GO:0015288"}


id: PBO:0045897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 2","termid":"PBO:0045897"}


id: PBO:0082524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell cycle-regulated gene of unknown function; promoter bound by Fkh2p; null mutant is sensitive to expression of the top1-T722A allele; TDA7 has a paralog, YDL211C, that arose from the whole genome duplication","termid":"PBO:0082524"}


id: PBO:0004581
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe GlycoProtease","termid":"PBO:0004581"}


id: PATO:0000498
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased duration","secondary_identifiers":["PATO:0000715"],"synonyms":[{"name":"chronic","type":"related"},{"name":"high time","type":"exact"},{"name":"increased period","type":"exact"},{"name":"increased time","type":"exact"},{"name":"prolonged period","type":"related"},{"name":"slow time","type":"related"}],"termid":"PATO:0000498"}


id: PBO:0028372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0028372"}


id: GO:1905373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ceramide phosphoethanolamine.","definition_xrefs":["GO_REF:0000068","GOC:hjd","PMID:25667419","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"is_a","term_name":"ceramide phosphoethanolamine metabolic process","termid":"GO:1905371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ceramide phosphoethanolamine biosynthetic process","synonyms":[{"name":"ceramide phosphoethanolamine anabolism","type":"exact"},{"name":"ceramide phosphoethanolamine biosynthesis","type":"exact"},{"name":"ceramide phosphoethanolamine formation","type":"exact"},{"name":"ceramide phosphoethanolamine synthesis","type":"exact"}],"termid":"GO:1905373"}


id: GO:0097468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell death resulting from activation of endogenous cellular processes and occurring as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"part_of","term_name":"cellular response to reactive oxygen species","termid":"GO:0034614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed cell death in response to reactive oxygen species","synonyms":[{"name":"PCD in response to oxidative stress","type":"broad"},{"name":"PCD in response to reactive oxygen species","type":"exact"},{"name":"programmed cell death in response to oxidative stress","type":"broad"},{"name":"reactive oxygen species-mediated PCD","type":"exact"},{"name":"reactive oxygen species-mediated programmed cell death","type":"exact"}],"termid":"GO:0097468"}


id: GO:0103047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methyl beta-D-glucoside 6-phosphate + H2O = beta-D-glucose 6-phosphate + methanol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methyl beta-D-glucoside 6-phosphate glucohydrolase activity (obsolete GO:0103047)","termid":"GO:0103047"}


id: PBO:0054468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1867","termid":"PBO:0054468"}


id: GO:0047705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 bilirubin + O2 = 2 biliverdin + 2 H2O.","definition_xrefs":["RHEA:20980","EC:1.3.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"bilirubin oxidase activity","secondary_identifiers":["MetaCyc:BILIRUBIN-OXIDASE-RXN","KEGG_REACTION:R02394"],"synonyms":[{"name":"bilirubin oxidase M-1","type":"related"},{"name":"bilirubin:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047705"}


id: PBO:0066097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS protein activator like 2","termid":"PBO:0066097"}


id: PBO:0081794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 724","termid":"PBO:0081794"}


id: PBO:0080398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS28 subunit of ESCRT-I","termid":"PBO:0080398"}


id: MONDO:0012359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of combined T and B cell immunodeficiency (CID) characterized by severe and persistent cytomegalovirus (CMV) infection and autoimmune cytopenia.","definition_xrefs":["Orphanet:231154"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to partial RAG1 deficiency","secondary_identifiers":["MEDGEN:372161","OMIM:609889","MESH:C563691","SCTID:725290000","UMLS:C1835931","GARD:13712"],"synonyms":[{"name":"CID due to partial RAG1 deficiency","type":"exact"},{"name":"CID with expansion of gamma delta T cells","type":"exact"},{"name":"alpha/beta T-cell lymphopenia with gamma/DELTA T-cell expansion, severe CYTOMEGALOVIRUS infection, and autoimmunity","type":"related"},{"name":"combined immunodeficiency with expansion of gamma delta T cells","type":"exact"}],"termid":"MONDO:0012359","xrefs":{"Monarch":{"xref_id":"0012359"}}}


id: PBO:0077139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TJAP1 pseudogene 1","termid":"PBO:0077139"}


id: PBO:0066848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 148","termid":"PBO:0066848"}


id: GO:0003160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the endocardium is generated and organized. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"endocardium development","termid":"GO:0003157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardium morphogenesis","termid":"GO:0003160"}


id: GO:0004667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H(2) = prostaglandin D(2).","definition_xrefs":["EC:5.3.99.2","RHEA:10600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"prostaglandin-D synthase activity","secondary_identifiers":["Reactome:R-HSA-2161701","KEGG_REACTION:R02266","MetaCyc:PROSTAGLANDIN-D-SYNTHASE-RXN","Reactome:R-HSA-2161620"],"synonyms":[{"name":"(5,13)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate D-isomerase activity","type":"related"},{"name":"PGD2 synthase activity","type":"related"},{"name":"PGH-PGD isomerase activity","type":"related"},{"name":"prostaglandin D2 synthase activity","type":"related"},{"name":"prostaglandin-H2 D-isomerase activity","type":"related"},{"name":"prostaglandin-R-prostaglandin D isomerase activity","type":"related"}],"termid":"GO:0004667"}


id: PBO:0076258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supervillin","termid":"PBO:0076258"}


id: PBO:0053487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 462","termid":"PBO:0053487"}


id: PBO:0069929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1222, pseudogene","termid":"PBO:0069929"}


id: PBO:0069138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 389, pseudogene","termid":"PBO:0069138"}


id: PBO:0089670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA 5'-end processing Pet127","termid":"PBO:0089670"}


id: PBO:0048506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 6","termid":"PBO:0048506"}


id: PBO:0055677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase F, gastric type","termid":"PBO:0055677"}


id: GO:0021936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates the frequency, rate or extent of granule cell precursor proliferation.","definition_xrefs":["GOC:dgh","PMID:15157725","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neural precursor cell proliferation","termid":"GO:2000177"},{"relation_name":"regulates","term_name":"cerebellar granule cell precursor proliferation","termid":"GO:0021930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cerebellar granule cell precursor proliferation","termid":"GO:0021936"}


id: PBO:0068149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 456","termid":"PBO:0068149"}


id: GO:0072021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an ascending thin limb over time, from its formation to the mature structure. The ascending thin limb is a segment of a nephron tubule lying in the inner medulla that is permeable to ions but not to water and has a simple epithelium; active transepithelial solute transport is absent.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"loop of Henle development","termid":"GO:0072070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascending thin limb development","termid":"GO:0072021"}


id: PR:O94340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.07c gene.","definition_xrefs":["UniProtKB:O94340","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C1271.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.07c","synonyms":[{"name":"Spom972h-SPBC1271.07c","type":"exact"}],"termid":"PR:O94340"}


id: FYPO:0001038
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119598],"is_not":false,"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"},{"relation_name":"is_a","term_name":"increased protein phosphorylation","termid":"FYPO:0002680"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null,"SJAG_04551":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"increased protein phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001038","terms_by_termid":{"FYPO:0001038":null}}


id: PBO:0077181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 5","termid":"PBO:0077181"}


id: PBO:0067286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 369, pseudogene","termid":"PBO:0067286"}


id: MONDO:0020263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar ataxia with oculomotor anomaly (obsolete MONDO:0020263)","secondary_identifiers":["Orphanet:98693"],"termid":"MONDO:0020263","xrefs":{"Monarch":{"xref_id":"0020263"}}}


id: GO:0098970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which diffusing neurotransmitter receptor becomes trapped at the postsynaptic specialization membrane. This is typically due to interaction with components of the post-synaptic specialization.","definition_xrefs":["PMID:18832033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"},{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"},{"relation_name":"is_a","term_name":"neurotransmitter receptor diffusion trapping","termid":"GO:0099628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"postsynaptic neurotransmitter receptor diffusion trapping","termid":"GO:0098970"}


id: PBO:0047228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 229 member B","termid":"PBO:0047228"}


id: GO:0014808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum calcium ion transport","termid":"GO:0070296"},{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol by endoplasmic reticulum","termid":"GO:1903514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","synonyms":[{"name":"release of sequestered calcium ion by sarcoplasmic reticulum into cytosol","type":"related"}],"termid":"GO:0014808"}


id: GO:0047968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + glyoxylate + NADP+ = H+ + NADPH + oxalyl-CoA.","definition_xrefs":["RHEA:21024","EC:1.2.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glyoxylate dehydrogenase (acylating) activity","secondary_identifiers":["KEGG_REACTION:R00468","MetaCyc:GLYOXYLATE-DEHYDROGENASE-ACYLATING-RXN"],"synonyms":[{"name":"glyoxylate:NADP+ oxidoreductase (CoA-oxalylating)","type":"related"}],"termid":"GO:0047968"}


id: GO:0141062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disruption of a tissue of another organism, leading to damage or temporary subversion of that tissue.","definition_xrefs":["PMID:27416066","PMID:34346770","PMID:11895956","PMID:26355030","PMID:28194160"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption of tissue in another organism (obsolete GO:0141062)","synonyms":[{"name":"tissue necrosis in another organism","type":"exact"}],"termid":"GO:0141062"}


id: FYPO:0000778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000298","FYPO:0000293","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of double-strand break repair","synonyms":[{"name":"delayed double-strand break repair","type":"exact"},{"name":"delayed onset of double-strand break repair during mitotic cell cycle","type":"related"},{"name":"delayed onset of double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0000778"}


id: MONDO:0021541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma that involves the retina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of retina","termid":"MONDO:0021453"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hemangioma of retina","secondary_identifiers":["MEDGEN:102307","NCIT:C3634","SCTID:93470007","UMLS:C0154051","ICD9:228.03"],"synonyms":[{"name":"angioma of retina","type":"exact"},{"name":"angioma of the retina","type":"exact"},{"name":"hemangioma of the retina","type":"exact"},{"name":"retina angioma","type":"exact"},{"name":"retina hemangioma","type":"exact"},{"name":"retinal angioma","type":"exact"},{"name":"retinal hemangioma","type":"exact"}],"termid":"MONDO:0021541","xrefs":{"Monarch":{"xref_id":"0021541"}}}


id: PBO:0074323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ArfGAP 1","termid":"PBO:0074323"}


id: GO:0075266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of oogonium development, a process that leads to the formation of a female gametangium of oomycetes, containing one or more gametes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of oogonium development","termid":"GO:0075264"},{"relation_name":"negatively_regulates","term_name":"oogonium development","termid":"GO:0075263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oogonium development","termid":"GO:0075266"}


id: GO:1900767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fonsecin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"naphtho-gamma-pyrone metabolic process","termid":"GO:1900785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"fonsecin metabolic process","synonyms":[{"name":"fonsecin metabolism","type":"exact"}],"termid":"GO:1900767"}


id: PR:O94247
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-binding protein SMUBP-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04870","PANTHER:PTHR10887:SF23","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha-associated DNA helicase A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.07c","secondary_identifiers":["UniProtKB:O94247"],"synonyms":[{"name":"Spom972h-IGHMBP2","type":"exact"}],"termid":"PR:O94247"}


id: GO:1990264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any peptidyl-tyrosine dephosphorylation that is involved in inactivation of protein kinase activity.","definition_xrefs":["PMID:7501024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine dephosphorylation","termid":"GO:0035335"},{"relation_name":"part_of","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity","termid":"GO:1990264"}


id: MONDO:0007917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphedema-cerebral arteriovenous anomaly syndrome is characterized by the variable association of a cerebrovascular malformation, foot lymphoedema and primary pulmonary hypertension. It has been described in a woman and four of her children.","definition_xrefs":["Orphanet:86914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphedema-cerebral arteriovenous anomaly syndrome","secondary_identifiers":["MEDGEN:322617","OMIM:152900","MESH:C563612","UMLS:C1835272","GARD:9217"],"synonyms":[{"name":"lymphedema and cerebral arteriovenous anomaly","type":"related"},{"name":"primary pulmonary hypertension, cerebrovascular malformation and lymphedema feet","type":"related"}],"termid":"MONDO:0007917","xrefs":{"Monarch":{"xref_id":"0007917"}}}


id: GO:0051300
data:
  {"annotated_genes":["SJAG_00719","SJAG_03200","SJAG_02529","SJAG_04003","SJAG_02795","SJAG_04745","SJAG_04558","SJAG_00773","SJAG_00794","SJAG_04781","SJAG_01805","SJAG_03915","SJAG_01760","SJAG_03544","SJAG_04901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89987,95708],"is_not":false,"summary":null,"term":"GO:0051300"},{"annotations":[95644],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140456"},{"annotations":[76116,78190,95645],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[115427,94140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990395"},{"annotations":[113148,90470,107739,112946,115428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903087"},{"annotations":[98599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905047"},{"annotations":[91637,114237,97202],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902441"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the spindle pole body (SPB). The SPB is the microtubule organizing center in fungi, and is functionally homologous to the animal cell centrosome.","definition_xrefs":["GOC:ai","GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00719":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_01760":null,"SJAG_01805":null,"SJAG_02529":null,"SJAG_02795":null,"SJAG_03200":null,"SJAG_03544":null,"SJAG_03915":null,"SJAG_04003":null,"SJAG_04558":null,"SJAG_04745":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0007049","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"spindle pole body organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051426"],"synonyms":[{"name":"SPB maturation","type":"related"},{"name":"SPB organization","type":"exact"},{"name":"spindle pole body maturation","type":"related"},{"name":"spindle pole body organisation","type":"exact"},{"name":"spindle pole body organization and biogenesis","type":"related"}],"termid":"GO:0051300","terms_by_termid":{"GO:0000073":null,"GO:0051300":null,"GO:0140456":null,"GO:1902441":null,"GO:1903087":null,"GO:1905047":null,"GO:1990395":null}}


id: GO:0018136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reduction of a peptide-linked thiazoline to thiazole.","definition_xrefs":["GOC:mah","PMID:19058272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"peptidyl-thiazoline dehydrogenase activity","termid":"GO:0018136"}


id: PBO:0040004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL14EP divergent transcript","termid":"PBO:0040004"}


id: PBO:0080055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 26","termid":"PBO:0080055"}


id: MONDO:0021009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the salivary glands. It is the most common primary carcinoma of the salivary glands and usually presents as a firm and painless mass. It is characterized by the presence of epidermoid cells, mucus producing cells, and cells of intermediate type. The majority of cases have a favorable outcome.","definition_xrefs":["NCIT:C5908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland carcinoma","termid":"MONDO:0000521"},{"relation_name":"is_a","term_name":"oral cavity mucoepidermoid carcinoma","termid":"MONDO:0044964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"salivary gland mucoepidermoid carcinoma","secondary_identifiers":["MEDGEN:277630","DOID:0081293","SCTID:423708008","UMLS:C1335903"],"synonyms":[{"name":"mucoepidermoid carcinoma of salivary gland","type":"exact"},{"name":"mucoepidermoid carcinoma of the salivary gland","type":"exact"},{"name":"saliva-secreting gland mucoepidermoid carcinoma","type":"exact"},{"name":"salivary gland mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0021009","xrefs":{"Monarch":{"xref_id":"0021009"}}}


id: GO:0050318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: digallate + H2O = 2 gallate + H+.","definition_xrefs":["EC:3.1.1.20","RHEA:16365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"tannase activity","secondary_identifiers":["MetaCyc:TANNASE-RXN","KEGG_REACTION:R00053"],"synonyms":[{"name":"tannase S","type":"related"},{"name":"tannin acetylhydrolase activity","type":"related"},{"name":"tannin acylhydrolase activity","type":"related"}],"termid":"GO:0050318"}


id: PBO:0064051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 85","termid":"PBO:0064051"}


id: PBO:0049257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G0/G1 switch 2","termid":"PBO:0049257"}


id: PBO:0070466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 1","termid":"PBO:0070466"}


id: PBO:0073367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family I member 2","termid":"PBO:0073367"}


id: PBO:0073350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 9 pseudogene 1","termid":"PBO:0073350"}


id: PBO:0076092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STUB1 pseudogene 1","termid":"PBO:0076092"}


id: PBO:0070910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 18","termid":"PBO:0070910"}


id: PBO:0082902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cys2His2 zinc-finger transcriptional repressor; involved in alkaline responsive gene repression as part of adaptation to alkaline conditions; involved in cell wall assembly; required for alkaline pH-stimulated haploid invasive growth and sporulation; activated by alkaline-dependent proteolytic processing which results in removal of the C-terminal tail; similar to A. nidulans PacC","termid":"PBO:0082902"}


id: PBO:0060832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD1 gamma-tubulin ring complex targeting factor","termid":"PBO:0060832"}


id: PBO:0068725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 14, pseudogene","termid":"PBO:0068725"}


id: GO:0007362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Specification of the terminal regions (the two non-segmented ends) of the embryo by the gap genes; exemplified in insects by the actions of huckebein and tailless gene products.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic pattern specification","termid":"GO:0009880"},{"relation_name":"part_of","term_name":"zygotic determination of anterior/posterior axis, embryo","termid":"GO:0007354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terminal region determination","termid":"GO:0007362"}


id: PBO:0049486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1-8 pseudogene 2","termid":"PBO:0049486"}


id: PBO:0054041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1377","termid":"PBO:0054041"}


id: MONDO:0011265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth agenesis","termid":"MONDO:0005486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth agenesis, selective, 2","secondary_identifiers":["MESH:C566513","OMIM:602639","MEDGEN:400679","UMLS:C1865092"],"synonyms":[{"name":"STHAG2","type":"exact"},{"name":"hypodontia/oligodontia 2","type":"related"},{"name":"tooth agenesis, selective, 2","type":"exact"}],"termid":"MONDO:0011265","xrefs":{"Monarch":{"xref_id":"0011265"}}}


id: GO:0075149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of signal transduction in response to host (obsolete GO:0075149)","synonyms":[{"name":"negative regulation of symbiont signal transduction in response to host","type":"exact"}],"termid":"GO:0075149"}


id: PBO:0050818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 3","termid":"PBO:0050818"}


id: MONDO:0014025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"proximal spinal muscular atrophy","termid":"MONDO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"lower motor neuron syndrome with late-adult onset","secondary_identifiers":["UMLS:C3554398","MEDGEN:767312","Orphanet:276435","DOID:0081356","GARD:17282","OMIM:615048","icd11.foundation:1650555742"],"synonyms":[{"name":"SMAJ","type":"related"},{"name":"spinal muscular atrophy, Jokela type","type":"related"}],"termid":"MONDO:0014025","xrefs":{"Monarch":{"xref_id":"0014025"}}}


id: GO:0034475
data:
  {"annotated_genes":["SJAG_04321","SJAG_03179","SJAG_04084","SJAG_04527","SJAG_04153","SJAG_04824","SJAG_04818","SJAG_01521","SJAG_00854","SJAG_01176","SJAG_02156"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71605,72066,72859,73581,73960,74717,75426,76672,77046,78044,88721],"is_not":false,"summary":null,"term":"GO:0034475"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a U4 snRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA 3'-end processing","termid":"GO:0034472"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01176":null,"SJAG_01521":null,"SJAG_02156":null,"SJAG_03179":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016073"],"is_obsolete":false,"name":"U4 snRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"U4 snRNA 3' end processing","type":"exact"}],"termid":"GO:0034475","terms_by_termid":{"GO:0034475":null}}


id: MONDO:0012994
data:
  {"annotated_genes":["SJAG_03098"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85804],"is_not":false,"summary":null,"term":"MONDO:0012994"}]},"cv_name":"mondo","definition":"Dopa responsive dystonia (DRD) due to sepiapterin reductase deficiency (SRD) is a very rare neurometabolic disorder characterized by dystonia with diurnal fluctuations, axial hypotonia, oculogyric crises, and delays in motor and cognitive development.","definition_xrefs":["Orphanet:70594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopa-responsive dystonia","termid":"MONDO:0016812"},{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"},{"relation_name":"is_a","term_name":"tetrahydrobiopterin metabolic process disease","termid":"MONDO:0045014"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03098":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0003441","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"dopa-responsive dystonia due to sepiapterin reductase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1885","DOID:0111168","GARD:10365","ICD9:277.89","MEDGEN:120642","OMIM:612716","NANDO:1200982","UMLS:C0268468","MESH:C562657","SCTID:45116002"],"synonyms":[{"name":"DRD due to SRD","type":"exact"},{"name":"DYT-SPR","type":"exact"},{"name":"SPR deficiency","type":"exact"},{"name":"SRD","type":"exact"},{"name":"Sepiapterin Reductase Deficiency","type":"exact"},{"name":"autosomal recessive sepiapterin reductase-deficient DRD","type":"exact"},{"name":"dopa-responsive dystonia due to sepiapterin reductase deficiency","type":"exact"},{"name":"dystonia, DOPA-responsive, due to sepiapterin reductase deficiency","type":"related"},{"name":"sepiapterin reductase deficiency","type":"exact"}],"termid":"MONDO:0012994","terms_by_termid":{"MONDO:0012994":null},"xrefs":{"Monarch":{"xref_id":"0012994"}}}


id: PBO:0041508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 93","termid":"PBO:0041508"}


id: GO:1903699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a tarsal gland over time, from its formation to the mature structure.","definition_xrefs":["PMID:20664693","GO_REF:0000094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sebaceous gland development","termid":"GO:0048733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tarsal gland development","synonyms":[{"name":"Meibomian gland development","type":"exact"},{"name":"gland of Meibom development","type":"exact"},{"name":"glandula tarsales development","type":"exact"},{"name":"tarsoconjunctival gland development","type":"related"}],"termid":"GO:1903699"}


id: MONDO:0012247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 27 (SCA27) is a very rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by early-onset tremor, dyskinesia, and slowly progressive cerebellar ataxia.","definition_xrefs":["Orphanet:98764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia type 27","secondary_identifiers":["OMIM:609307","DOID:0050976","UMLS:C1836383","MEDGEN:373075","MESH:C537204","GARD:9963","icd11.foundation:1408059647","SCTID:719252002"],"synonyms":[{"name":"SCA27","type":"exact"},{"name":"cerebellar ataxia autosomal dominant FGF14-related","type":"related"},{"name":"cerebellar ataxia, autosomal dominant, Fgf14-related","type":"related"},{"name":"spinocerebellar ataxia 27","type":"related"},{"name":"spinocerebellar ataxia type 27","type":"exact"}],"termid":"MONDO:0012247","xrefs":{"Monarch":{"xref_id":"0012247"}}}


id: PBO:0003915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt6 (predicted)","termid":"PBO:0003915"}


id: PBO:0055680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase I","termid":"PBO:0055680"}


id: PBO:0042896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H","termid":"PBO:0042896"}


id: FYPO:0008176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere inner repeat region are present at greater levels than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric transcript level","termid":"FYPO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased centromeric inner repeat transcript level","termid":"FYPO:0008176"}


id: PBO:0057563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 758","termid":"PBO:0057563"}


id: PATO:0001523
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which is equal to the quotient of the speed of a sound wave divided by its wavelength.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Sound_wavelength"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wavelength","termid":"PATO:0001242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sound wavelength","termid":"PATO:0001523"}


id: SO:0001786
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A functional variant whereby the sequence alteration causes a loss of function of one allele of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loss_of_heterozygosity","synonyms":[{"name":"LOH","type":"exact"},{"name":"loss of heterozygosity","type":"exact"}],"termid":"SO:0001786"}


id: PBO:0059573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1X pseudogene 1","termid":"PBO:0059573"}


id: GO:0061454
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108978],"is_not":false,"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The directed movement of calcium ions (Ca2+) out of the Golgi apparatus into the cytosol.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"},{"relation_name":"is_a","term_name":"Golgi calcium ion transmembrane transport","termid":"GO:0061856"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"release of sequestered calcium ion into cytosol by Golgi","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi calcium ion export","type":"broad"}],"termid":"GO:0061454","terms_by_termid":{"GO:0061454":null}}


id: MONDO:0007265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cardiofaciocutaneous syndrome in which the cause of the disease is a mutation in the BRAF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiofaciocutaneous syndrome","termid":"MONDO:0015280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005267"],"is_obsolete":false,"name":"cardiofaciocutaneous syndrome 1","secondary_identifiers":["DOID:0111460","OMIM:115150"],"synonyms":[{"name":"BRAF cardiofaciocutaneous syndrome","type":"exact"},{"name":"CFC syndrome","type":"related"},{"name":"CFC1","type":"related"},{"name":"Cfcs","type":"related"},{"name":"cardiofaciocutaneous syndrome","type":"broad"},{"name":"cardiofaciocutaneous syndrome 1","type":"exact"},{"name":"cardiofaciocutaneous syndrome caused by mutation in BRAF","type":"exact"},{"name":"cardiofaciocutaneous syndrome type 1","type":"exact"}],"termid":"MONDO:0007265","xrefs":{"Monarch":{"xref_id":"0007265"}}}


id: PBO:0043457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin and CBS domain divalent metal cation transport mediator 3","termid":"PBO:0043457"}


id: MONDO:0011591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 9q13-q22.","definition_xrefs":["DOID:0110246","PMID:11179024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 26 multiple types","secondary_identifiers":["UMLS:C1854003","OMIM:605749","MESH:C565298","MEDGEN:381316"],"synonyms":[{"name":"CTRCT26","type":"exact"},{"name":"cataract 26, multiple types","type":"related"},{"name":"cataract, autosomal recessive, early-onset, pulverulent","type":"related"}],"termid":"MONDO:0011591","xrefs":{"Monarch":{"xref_id":"0011591"}}}


id: PBO:0043529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cordon-bleu WH2 repeat protein","termid":"PBO:0043529"}


id: PBO:0054206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1586","termid":"PBO:0054206"}


id: GO:0030110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I molecule of the HLA-C subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["PMID:9368779","GOC:add","GOC:mah","PMID:11929129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class I receptor activity","termid":"GO:0032396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"HLA-C specific inhibitory MHC class I receptor activity","termid":"GO:0030110"}


id: FYPO:0003903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells are grown at a temperature lower than standard.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"loss of viability at low temperature","synonyms":[{"name":"decreased viability at low temperature","type":"exact"},{"name":"loss of cell population viability at low temperature","type":"exact"},{"name":"loss of viability at restrictive temperature","type":"related"},{"name":"reduced viability at low temperature","type":"exact"}],"termid":"FYPO:0003903"}


id: PBO:0046855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase 3","termid":"PBO:0046855"}


id: PBO:0004216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase Tdh1","termid":"PBO:0004216"}


id: FYPO:0001271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation stops before completing separation of chromosomes; some, but not all, DNA may be moved towards the ends of an elongated mitotic spindle. Chromosomes do not segregate into two equal masses.","definition_xrefs":["PomBase:mah","PMID:22711988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal mitotic sister chromatid segregation","termid":"FYPO:0003241"},{"relation_name":"is_a","term_name":"incomplete mitotic sister chromatid segregation","termid":"FYPO:0003757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0000337","FYPO:0001320"],"is_obsolete":false,"name":"incomplete, unequal mitotic sister chromatid segregation","synonyms":[{"name":"incomplete, unequal mitotic chromosome segregation","type":"exact"},{"name":"incomplete, unequal mitotic sister chromatid segregation during vegetative growth","type":"exact"},{"name":"incomplete, unequal mitotic sister chromatid separation","type":"related"},{"name":"incomplete, unequal sister chromatid segregation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001271"}


id: PBO:0060290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 6B","termid":"PBO:0060290"}


id: FYPO:0006701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of UMP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular UMP level","synonyms":[{"name":"decreased cellular UMP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular UMP level during vegetative growth","type":"exact"},{"name":"reduced cellular UMP level","type":"exact"}],"termid":"FYPO:0006701"}


id: PBO:0057186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 342","termid":"PBO:0057186"}


id: PBO:0077871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM4 pseudogene 2","termid":"PBO:0077871"}


id: PBO:0083245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; extensive overlap with PGA2/YNL149C, an uncharacterized gene with a proposed role in protein trafficking","termid":"PBO:0083245"}


id: GO:0075226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological, developmental and morphological changes that occur in an encysted zoospore, that germinates by developing a germ tube that may penetrate the host directly or indirectly through an appressorium. An encysted zoospore is a zoospore which has shed its flagellum and whose membrane has fused to form a walled cyst. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"encysted zoospore germination","synonyms":[{"name":"encysted zoospore germination on or near host","type":"exact"}],"termid":"GO:0075226"}


id: PBO:0034582
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_lysed_cell","termid":"PBO:0034582"}


id: PBO:0070606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 74","termid":"PBO:0070606"}


id: MONDO:0800459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Noxacusis/pain hyperacusis is characterized by individuals who experience otalgia or pain (e.g., dull ache, burning, sharp, stabbing pain and throbbing pain) in response to everyday sounds. This differs clinically from those whose primary symptom is the perception of everyday sounds as excessively loud (termed loudness hyperacusis).","definition_xrefs":["PMID:26553995","PMID:25104073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperacusis","termid":"MONDO:0043303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"noxacusis","synonyms":[{"name":"auditory nociception","type":"exact"},{"name":"noise-induced pain","type":"exact"},{"name":"noxacusis","type":"exact"},{"name":"pain hyperacusis","type":"exact"}],"termid":"MONDO:0800459","xrefs":{"Monarch":{"xref_id":"0800459"}}}


id: PBO:0042192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D2 pseudogene 1","termid":"PBO:0042192"}


id: PBO:0067208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 273, pseudogene","termid":"PBO:0067208"}


id: PBO:0077088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 3","termid":"PBO:0077088"}


id: PR:Q9Y815
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsv2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein rsv2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.14","synonyms":[{"name":"Spom972h-rsv2","type":"exact"},{"name":"required for stationary phase viability protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y815"}


id: PBO:0061078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural killer cell triggering receptor","termid":"PBO:0061078"}


id: PBO:0062686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 7","termid":"PBO:0062686"}


id: PBO:0108579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA complex subunit, armadillo-type fold Tti1","termid":"PBO:0108579"}


id: PBO:0058888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10525","termid":"PBO:0058888"}


id: MONDO:1012582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inherited cone-rod dystrophy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"},{"relation_name":"is_a","term_name":"perceptual disorders, non-human animal","termid":"MONDO:1011343"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod dystrophy, non-human animal","termid":"MONDO:1012582","xrefs":{"Monarch":{"xref_id":"1012582"}}}


id: GO:1900277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of proteinase activated receptor activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of proteinase activated receptor activity (obsolete GO:1900277)","synonyms":[{"name":"down regulation of proteinase activated receptor activity","type":"exact"},{"name":"down-regulation of proteinase activated receptor activity","type":"exact"},{"name":"downregulation of proteinase activated receptor activity","type":"exact"},{"name":"inhibition of proteinase activated receptor activity","type":"narrow"}],"termid":"GO:1900277"}


id: PBO:0047656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 8","termid":"PBO:0047656"}


id: PBO:0067116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 160, pseudogene","termid":"PBO:0067116"}


id: PBO:0079617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L2 (pseudogene)","termid":"PBO:0079617"}


id: PBO:0073557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHC adaptor protein 1 pseudogene 1","termid":"PBO:0073557"}


id: PBO:0067715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 13","termid":"PBO:0067715"}


id: PBO:0051175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-64","termid":"PBO:0051175"}


id: FYPO:0000220
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere outer repeat region are present at greater levels than normal.","definition_xrefs":["PMID:20211136","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric transcript level","termid":"FYPO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased centromeric outer repeat transcript level","synonyms":[{"name":"increased accumulation of centromeric outer repeat transcripts","type":"related"},{"name":"increased accumulation of centromeric outer repeat transcripts during vegetative growth","type":"related"},{"name":"increased accumulation of non-coding outer repeat transcripts","type":"exact"},{"name":"increased centromere outer repeat transcript level","type":"exact"},{"name":"increased centromeric outer repeat transcript level during mitotic cell cycle","type":"related"},{"name":"increased centromeric outer repeat transcript level during vegetative growth","type":"exact"},{"name":"increased centromeric outer repeat-derived transcript level","type":"exact"},{"name":"increased level of centromeric outer repeat transcripts","type":"exact"}],"termid":"FYPO:0000220"}


id: PBO:0110987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-acting regulatory lncRNA prt, pho1 repressing","termid":"PBO:0110987"}


id: PBO:0029087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_(guanine(9)-N(1))-methyltransferase_activity","termid":"PBO:0029087"}


id: PBO:0085324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol-4-phosphate 5-kinase; involved in actin cytoskeleton organization and cell morphogenesis; multicopy suppressor of stt4 mutation","termid":"PBO:0085324"}


id: GO:0071598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that is found in the cytoplasm of axons and dendrites, and transports translationally silenced mRNAs to dendritic synapses, where they are released and translated in response to specific exogenous stimuli.","definition_xrefs":["GOC:BHF","GOC:go_curators","GOC:mah","PMID:19015237","PMID:20368989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"},{"relation_name":"part_of","term_name":"neuron projection cytoplasm","termid":"GO:0120111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"neuronal ribonucleoprotein granule","synonyms":[{"name":"neuronal RNA granule","type":"narrow"},{"name":"neuronal RNP granule","type":"exact"}],"termid":"GO:0071598"}


id: GO:0031151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 79) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 79). This reaction is the addition of a methyl group to the lysine residue at position 79 of the histone H3 protein.","definition_xrefs":["GOC:mah","PMID:15371351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140096","GO:0016741","GO:0003674","GO:0008276"],"is_obsolete":false,"name":"histone H3K79 methyltransferase activity","synonyms":[{"name":"histone H3K79 methylase activity","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H3-K79 specific)","type":"exact"},{"name":"histone methylase activity (H3-K79 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-K79 specific)","type":"exact"},{"name":"histone-H3K79 methyltransferase activity","type":"exact"}],"termid":"GO:0031151"}


id: GO:0034835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-mercaptobenzothiazole + 1/2 O2 = 6-hydroxy-2-mercaptobenzothiazole.","definition_xrefs":["UM-BBD_reactionID:r1178"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-mercaptobenzothiazole monooxygenase activity (obsolete GO:0034835)","termid":"GO:0034835"}


id: PBO:0111649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex and Lid2 complex subunit Ash2-trithorax family","termid":"PBO:0111649"}


id: GO:0102068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1E,4E,8E)-alpha-humulene + NADPH + O2 + H+ = 10-hydroxy-alpha-humulene + NADP + H2O.","definition_xrefs":["EC:1.14.14.113","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-humulene 10-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-10628","RHEA:32491"],"termid":"GO:0102068"}


id: GO:0016694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial catalase-peroxidase activity (obsolete GO:0016694)","synonyms":[{"name":"bacterial catalase-peroxidase activity","type":"exact"}],"termid":"GO:0016694"}


id: MONDO:0012989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the STIL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 7, primary, autosomal recessive","secondary_identifiers":["MESH:C567198","MEDGEN:436370","OMIM:612703","UMLS:C2675187","DOID:0070278","GARD:15580"],"synonyms":[{"name":"MCPH7","type":"related"},{"name":"STIL autosomal recessive primary microcephaly","type":"exact"},{"name":"autosomal recessive primary microcephaly caused by mutation in STIL","type":"exact"},{"name":"microcephaly 7, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0012989","xrefs":{"Monarch":{"xref_id":"0012989"}}}


id: MONDO:0004407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroblastic tumor characterized by the presence of a ganglioneuroblastoma component and the formation of Schwannian stroma which is the predominant component of the tumor volume.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nodular ganglioneuroblastoma","termid":"MONDO:0003325"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stroma-dominant and stroma-poor composite ganglioneuroblastoma","secondary_identifiers":["NCIT:C42060","UMLS:C1516761","DOID:7949","MEDGEN:275793"],"synonyms":[{"name":"composite ganglioneuroblastoma, Stroma-dominant and Stroma-poor","type":"exact"}],"termid":"MONDO:0004407","xrefs":{"Monarch":{"xref_id":"0004407"}}}


id: FYPO:0004811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II is abnormal. Termination of all transcripts, or a subset of transcripts, may be affected.","definition_xrefs":["GO:0006369","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription termination","termid":"FYPO:0003556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase II transcription","synonyms":[{"name":"abnormal RNA polymerase II transcription termination","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase II transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0004811"}


id: FYPO:0005820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of neddylation of one or more specific proteins, or of specific protein sites, is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein neddylation during vegetative growth","termid":"FYPO:0005819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased protein neddylation during vegetative growth","synonyms":[{"name":"increased protein neddylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005820"}


id: PBO:0000601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Pom2","termid":"PBO:0000601"}


id: PATO:0002243
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a fluid (liquid or gas) by virtue of the amount of fluid which passes through a given surface per unit time.","direct_ancestors":[{"relation_name":"is_a","term_name":"flow rate","termid":"PATO:0001574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluid flow rate","synonyms":[{"name":"volume flow rate","type":"exact"},{"name":"volumetric flow rate","type":"exact"}],"termid":"PATO:0002243"}


id: GO:0019447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-cysteine, (S)-2-amino-3-mercaptopropanoic acid, which occurs naturally in firefly luciferin.","definition_xrefs":["PMID:11527960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine catabolic process","termid":"GO:0009093"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-cysteine metabolic process","termid":"GO:0046438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"D-cysteine catabolic process","synonyms":[{"name":"D-cysteine breakdown","type":"exact"},{"name":"D-cysteine catabolism","type":"exact"},{"name":"D-cysteine degradation","type":"exact"}],"termid":"GO:0019447"}


id: PBO:0088990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1/2 complex WD repeat protein Pop3/Wat1/Lst8","termid":"PBO:0088990"}


id: PBO:0000559
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.11.9","termid":"PBO:0000559"}


id: GO:0031591
data:
  {"annotated_genes":["SJAG_04265","SJAG_05334","SJAG_01261","SJAG_04735"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72624,74051,75077,95040],"is_not":false,"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.","definition_xrefs":["GOC:hjd","RNAmods:037","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"wybutosine metabolic process","termid":"GO:0031590"},{"relation_name":"is_a","term_name":"glycosyl compound biosynthetic process","termid":"GO:1901659"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01261":null,"SJAG_04265":null,"SJAG_04735":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"wybutosine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"yW biosynthesis","type":"exact"},{"name":"yW biosynthetic process","type":"exact"}],"termid":"GO:0031591","terms_by_termid":{"GO:0031591":null}}


id: PBO:0055178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2602","termid":"PBO:0055178"}


id: PBO:0046274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"essential meiotic structure-specific endonuclease 1","termid":"PBO:0046274"}


id: PBO:0042801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 350","termid":"PBO:0042801"}


id: PBO:0041122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 6","termid":"PBO:0041122"}


id: PBO:0028856
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-conjugation_without_nitrogen_starvation","termid":"PBO:0028856"}


id: PBO:0028753
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_alpha-glucan_level_during_cellular_response_to_calcium_starvation","termid":"PBO:0028753"}


id: PBO:0028572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_M_phase_without_septation","termid":"PBO:0028572"}


id: FYPO:0004906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PMID:23314747","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of histone gene mRNA during vegetative growth","synonyms":[{"name":"decreased histone gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of histone gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of histone gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of histone gene transcripts during vegetative growth","type":"exact"},{"name":"reduced level of histone gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004906"}


id: PBO:0061269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOVA alternative splicing regulator 2","termid":"PBO:0061269"}


id: PBO:0064423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 1","termid":"PBO:0064423"}


id: GO:0008724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the ATP-independent breakage of DNA, followed by passage and rejoining. It also catalyzes the relaxation of supercoiled DNA, and the decatenation and unknotting of DNA in vivo.","definition_xrefs":["EC:5.99.1.-","PMID:11274059"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA topoisomerase IV activity (obsolete GO:0008724)","synonyms":[{"name":"DNA topoisomerase IV activity","type":"exact"}],"termid":"GO:0008724"}


id: FYPO:0003317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a growing cell tip is decreased, and the protein is also detected distributed throughout the plasma membrane and/or cell cortex.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to growing cell tip","termid":"FYPO:0002871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to growing cell tip, with protein distributed in plasma membrane or cortex","synonyms":[{"name":"decreased protein localisation to growing cell tip, with protein distributed in plasma membrane or cortex","type":"exact"},{"name":"decreased protein localization to growing cell end, with protein distributed in plasma membrane or cortex","type":"exact"},{"name":"decreased protein localization to growing cell tip, with protein distributed in cell cortex","type":"narrow"},{"name":"decreased protein localization to growing cell tip, with protein distributed in cell membrane or cortex","type":"exact"},{"name":"decreased protein localization to growing cell tip, with protein distributed in plasma membrane","type":"narrow"},{"name":"decreased protein localization to growing cell tip, with protein distributed in plasma membrane or cortex during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to growing cell tip, with protein distributed in plasma membrane or cortex, during vegetative growth","type":"exact"},{"name":"reduced protein localization to growing cell tip, with protein distributed in plasma membrane or cortex","type":"exact"}],"termid":"FYPO:0003317"}


id: MONDO:0003561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An undifferentiated pleomorphic sarcoma characterized by the presence of osteoclast-like giant cells and cellular pleomorphism.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undifferentiated pleomorphic sarcoma","termid":"MONDO:0002142"},{"relation_name":"is_a","term_name":"malignant giant cell tumor","termid":"MONDO:0002402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant giant cell tumor of soft parts","secondary_identifiers":["UMLS:C0334554","MEDGEN:90807","NCIT:C8380","DOID:5638","ICDO:9251/3"],"synonyms":[{"name":"giant cell fibrous histiocytoma","type":"exact"},{"name":"giant cell malignant fibrous histiocytoma","type":"exact"},{"name":"malignant Osteoclastoma","type":"exact"},{"name":"malignant giant cell neoplasm of soft parts","type":"exact"},{"name":"malignant giant cell tumor of soft parts","type":"exact"},{"name":"malignant giant cell tumor of soft parts (morphologic abnormality)","type":"exact"},{"name":"malignant giant cell tumour of soft parts (morphologic abnormality)","type":"exact"},{"name":"undifferentiated pleomorphic sarcoma with osteoclast-like giant cells","type":"exact"}],"termid":"MONDO:0003561","xrefs":{"Monarch":{"xref_id":"0003561"}}}


id: GO:0035894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of platelet aggregation in another organism.","definition_xrefs":["GOC:fj","PMID:11453648","GOC:bf","PMID:18804547"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of platelet aggregation in another organism (obsolete GO:0035894)","synonyms":[{"name":"positive regulation of platelet aggregation in another organism","type":"related"},{"name":"positive regulation of platelet aggregation in other organism","type":"exact"},{"name":"up-regulation of platelet aggregation in other organism","type":"related"},{"name":"upregulation of platelet aggregation in other organism","type":"exact"}],"termid":"GO:0035894"}


id: FYPO:0001403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which cells adhere to a substrate more strongly or to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion during vegetative growth","termid":"FYPO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cell-substrate adhesion","synonyms":[{"name":"increased cell-substrate adhesion during mitotic cell cycle","type":"related"},{"name":"increased cell-substrate adhesion during vegetative growth","type":"exact"}],"termid":"FYPO:0001403"}


id: MONDO:0005738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic infection caused by tapeworm larvae of Echinococcus. It affects livestock and humans. It is characterized by the formation of hydatid cysts mainly in the liver, lungs, spleen, and kidneys. Rupture of the cysts may lead to shock.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cestode infectious disease","termid":"MONDO:0042488"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"echinococcosis","secondary_identifiers":["ICD9:122.9","EFO:0007245","ICD9:122","icd11.foundation:1456802165","SCTID:74942003","NCIT:C84682","DOID:1496","MESH:D004443","UMLS:C0013502","ICD10CM:B67","MEDGEN:4438"],"synonyms":[{"name":"Echinococcus caused disease or disorder","type":"exact"},{"name":"Echinococcus disease or disorder","type":"exact"},{"name":"Echinococcus infectious disease","type":"exact"},{"name":"echinococcal disease","type":"narrow"},{"name":"echinococciasis","type":"related"},{"name":"echinococcosis","type":"exact"},{"name":"echinococcosis of liver","type":"exact"},{"name":"echinococcosis, unspecified, of liver","type":"narrow"},{"name":"echinococcus disease","type":"related"},{"name":"hepatic echinococcosis","type":"narrow"},{"name":"hydatid disease","type":"narrow"},{"name":"hydatidosis","type":"narrow"},{"name":"liver echinococcus","type":"exact"},{"name":"pulmonary echinococcosis","type":"narrow"}],"termid":"MONDO:0005738","xrefs":{"Monarch":{"xref_id":"0005738"}}}


id: PBO:0075006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-17","termid":"PBO:0075006"}


id: MONDO:0001505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute hepatitis resulting from ingestion of alcohol.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis","termid":"MONDO:0002251"},{"relation_name":"is_a","term_name":"alcoholic liver diseases","termid":"MONDO:0043693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"alcoholic hepatitis","secondary_identifiers":["DOID:12351","icd11.foundation:229221394","MEDGEN:42422","CSP:1754-6978","EFO:1001345","ICD9:571.1","MESH:D006519","ICD10CM:K70.1","SCTID:235875008","NCIT:C34684","UMLS:C0019187"],"synonyms":[{"name":"acute alcoholic Hepatitis","type":"exact"},{"name":"acute alcoholic hepatitis","type":"exact"},{"name":"acute alcoholic liver disease","type":"exact"},{"name":"alcoholic Hepatitis","type":"exact"},{"name":"alcoholic hepatitis","type":"exact"}],"termid":"MONDO:0001505","xrefs":{"Monarch":{"xref_id":"0001505"}}}


id: PBO:0069425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 689, pseudogene","termid":"PBO:0069425"}


id: MONDO:0006967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete septic abortion (obsolete MONDO:0006967)","secondary_identifiers":["MedDRA:10040056","MESH:D000031"],"termid":"MONDO:0006967","xrefs":{"Monarch":{"xref_id":"0006967"}}}


id: MONDO:0005638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder characterized by the lack of ability to recognize individuals, objects, shapes, sounds, or smells. There is no loss of memory. It is caused by neurological damage in the brain, specifically in the occipital or parietal lobes.","definition_xrefs":["NCIT:C84542"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"communication disorder","termid":"MONDO:0002182"},{"relation_name":"is_a","term_name":"perceptual disorders","termid":"MONDO:0024417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agnosia","secondary_identifiers":["ICD10CM:R48.2","ICD10CM:R48.1","MESH:D001072","MEDGEN:174","icd11.foundation:1315065296","SCTID:68345001","UMLS:C0001816","MESH:D000377","DOID:4090","EFO:0007136"],"synonyms":[{"name":"Monomodal visual amnesia","type":"narrow"},{"name":"agnosia","type":"exact"},{"name":"dyspraxia (finding)","type":"related"},{"name":"dyspraxia syndrome","type":"related"},{"name":"primary visual agnosia","type":"narrow"},{"name":"visual amnesia","type":"narrow"}],"termid":"MONDO:0005638","xrefs":{"Monarch":{"xref_id":"0005638"}}}


id: GO:0140036
data:
  {"annotated_genes":["SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061649"}]},"cv_name":"molecular_function","definition":"A molecular adaptor recognizes and binds a target protein containing a ubiquitination modification and brings the target protein into contact with another protein to allow those proteins to function in a coordinated way.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein reader activity","termid":"GO:0140035"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"ubiquitin-modified protein reader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ubiquitin-dependent protein binding","type":"exact"}],"termid":"GO:0140036","terms_by_termid":{"GO:0061649":null}}


id: MONDO:0004413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of cervical squamous cell carcinoma characterized by the presence of polygonal squamous cells. Intercellular bridges and cytoplasmic keratinization may be present, but keratin pearls are absent.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical squamous cell carcinoma","termid":"MONDO:0006143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical non-keratinizing squamous cell carcinoma","secondary_identifiers":["MEDGEN:309426","NCIT:C40188","UMLS:C1518366","DOID:7961"],"termid":"MONDO:0004413","xrefs":{"Monarch":{"xref_id":"0004413"}}}


id: GO:0070446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of oligodendrocyte progenitor proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gliogenesis","termid":"GO:0014014"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte progenitor proliferation","termid":"GO:0070445"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"oligodendrocyte progenitor proliferation","termid":"GO:0070444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oligodendrocyte progenitor proliferation","synonyms":[{"name":"negative regulation of oligodendrocyte precursor proliferation","type":"exact"}],"termid":"GO:0070446"}


id: MONDO:0007884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leg ulcers, familial, of juvenile onset","secondary_identifiers":["MEDGEN:322673","MESH:C563632","UMLS:C1835489","OMIM:150590"],"synonyms":[{"name":"leg ulcers, familial, of juvenile onset","type":"exact"}],"termid":"MONDO:0007884","xrefs":{"Monarch":{"xref_id":"0007884"}}}


id: PBO:0083932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 cyclin involved in cell cycle progression; activates Cdc28p kinase to promote G1 to S phase transition; plays a role in regulating transcription of other G1 cyclins, CLN1 and CLN2; regulated by phosphorylation and proteolysis; acetyl-CoA induces CLN3 transcription in response to nutrient repletion to promote cell-cycle entry; cell cycle arrest phenotype of the cln1 cln2 cln3 triple null mutant is complemented by any of human cyclins CCNA2, CCNB1, CCNC, CCND1, or CCNE1","termid":"PBO:0083932"}


id: MONDO:0020317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia associated with t(9;11)(p22.3;q23.3) and MLLT3-KMT2A fusion protein expression. Morphologically it usually has monocytic features. It may present at any age but it is more commonly seen in children. Patients may present with disseminated intravascular coagulation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia with 11q23 abnormalities","secondary_identifiers":["NCIT:C82403","SCTID:444911000","Orphanet:98831","UMLS:C1292775","GARD:19587","MEDGEN:266234","ICDO:9897/3"],"synonyms":[{"name":"AML with 11q23 abnormalities","type":"exact"},{"name":"AML with t(9;11)(p22;q23); MLLT3-MLL","type":"exact"},{"name":"acute myeloid Leukaemia with t(9;11)(p21.3;q23.3); MLLT3-KMT2A","type":"exact"},{"name":"acute myeloid Leukemia with t(9;11)(p21.3;q23.3); MLLT3-KMT2A","type":"exact"},{"name":"acute myeloid leukaemia with 11q23 (MLL) abnormalities","type":"exact"},{"name":"acute myeloid leukaemia with MLL abnormalities","type":"exact"},{"name":"acute myeloid leukaemia with t(9;11)(p22.3;q23.3); MLLT3-KMT2A","type":"exact"},{"name":"acute myeloid leukaemia with t(9;11)(p22;q23); MLLT3-MLL","type":"exact"},{"name":"acute myeloid leukemia with 11q23 (MLL) abnormalities","type":"exact"},{"name":"acute myeloid leukemia with MLL abnormalities","type":"exact"},{"name":"acute myeloid leukemia with t(9;11)(p22.3;q23.3); MLLT3-KMT2A","type":"exact"},{"name":"acute myeloid leukemia with t(9;11)(p22;q23); MLLT3-MLL","type":"exact"}],"termid":"MONDO:0020317","xrefs":{"Monarch":{"xref_id":"0020317"}}}


id: GO:0072056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the kidney pyramids over time, from its formation to the mature structure. Kidney pyramids are the conical masses that constitute the renal medulla in a multi-lobed mammalian kidney; they contain the loops of Henle and the medullary collecting ducts.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyramid development","synonyms":[{"name":"kidney pyramid development","type":"exact"},{"name":"pyramids development","type":"exact"},{"name":"renal medulla development","type":"exact"},{"name":"renal pyramid development","type":"exact"}],"termid":"GO:0072056"}


id: FYPO:0005063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 4 of histone H3 at the mating type locus occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K4 methylation at mating type locus during vegetative growth","synonyms":[{"name":"increased histone H3 K4 methylation at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 methylation at mating type locus during mitotic cell cycle","type":"related"},{"name":"increased histone H3K4 methylation at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone H3K4me at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K4 methylation at mating type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0005063"}


id: GO:0004118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is increased in the presence of cGMP.","definition_xrefs":["PMID:35216259","PMID:15210692","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"3',5'-cGMP-stimulated cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004118"}


id: FYPO:0001711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is stabilized, i.e. interactions between the iron-sulfur cluster and the gene product do not last as long as in wild type under any given set of conditions. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster binding","termid":"FYPO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"destabilized iron-sulfur cluster binding","synonyms":[{"name":"decreased duration of iron-sulfur cluster binding","type":"exact"},{"name":"destabilised iron-sulfur cluster binding","type":"exact"},{"name":"destabilized iron-sulphur cluster binding","type":"exact"}],"termid":"FYPO:0001711"}


id: PBO:0030140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_GTP_binding","termid":"PBO:0030140"}


id: PBO:0080042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 28","termid":"PBO:0080042"}


id: PBO:0067733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 31","termid":"PBO:0067733"}


id: PBO:0061655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear FMR1 interacting protein 2","termid":"PBO:0061655"}


id: GO:0098895
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a postsynaptic endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"postsynaptic endosome","termid":"GO:0098845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005768","GO:0031410"],"is_obsolete":false,"name":"postsynaptic endosome membrane","termid":"GO:0098895"}


id: GO:0010718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition is where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition","termid":"GO:0010717"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial to mesenchymal transition","termid":"GO:0010718"}


id: MONDO:0020556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pleuropulmonary blastoma composed of malignant small cells and characterized by the presence of a sarcomatous component. It usually follows an aggressive clinical course.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleuropulmonary blastoma","termid":"MONDO:0011014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleuropulmonary blastoma type 2","secondary_identifiers":["Orphanet:99934","ICD9:162.9","MEDGEN:328133","NCIT:C45627","SCTID:707672001","GARD:19716","UMLS:C1710500"],"synonyms":[{"name":"type II pleuropulmonary blastoma","type":"exact"}],"termid":"MONDO:0020556","xrefs":{"Monarch":{"xref_id":"0020556"}}}


id: MOD:01057
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dibromo-L-tyrosine","termid":"MOD:01023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(79)Br and (81)Br labeled 3',5'-dibromotyrosine","termid":"MOD:01057"}


id: MONDO:0032836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Weiss-Kruszka syndrome","secondary_identifiers":["UMLS:C5568107","Orphanet:502430","OMIM:618619","MEDGEN:1799530"],"synonyms":[{"name":"WSKA","type":"exact"},{"name":"Weiss-Kruszka syndrome","type":"exact"},{"name":"ZNF462 disorder","type":"exact"},{"name":"metopic ridging-ptosis-facial dysmorphism syndrome","type":"exact"}],"termid":"MONDO:0032836","xrefs":{"Monarch":{"xref_id":"0032836"}}}


id: PBO:0052234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 9 pseudogene 2","termid":"PBO:0052234"}


id: GO:0048402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the intermediate mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm structural organization","termid":"GO:0048338"},{"relation_name":"part_of","term_name":"intermediate mesoderm morphogenesis","termid":"GO:0048390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesoderm structural organization","synonyms":[{"name":"intermediate mesoderm structural organisation","type":"exact"}],"termid":"GO:0048402"}


id: PBO:0069098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 345, pseudogene","termid":"PBO:0069098"}


id: PBO:0041963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 6","termid":"PBO:0041963"}


id: PBO:0050479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A7","termid":"PBO:0050479"}


id: PBO:0043760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10","termid":"PBO:0043760"}


id: GO:1903179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dopamine biosynthetic process.","definition_xrefs":["GOC:PARL","GOC:bf","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of dopamine metabolic process","termid":"GO:0042053"},{"relation_name":"regulates","term_name":"dopamine biosynthetic process","termid":"GO:0042416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dopamine biosynthetic process","synonyms":[{"name":"regulation of dopamine anabolism","type":"exact"},{"name":"regulation of dopamine biosynthesis","type":"exact"},{"name":"regulation of dopamine formation","type":"exact"},{"name":"regulation of dopamine synthesis","type":"exact"}],"termid":"GO:1903179"}


id: PBO:0071950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S5","termid":"PBO:0071950"}


id: MONDO:0007014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus vibrio.","definition_xrefs":["MESH:D014735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vibrio infectious disease","secondary_identifiers":["MEDGEN:53010","EFO:1001235","UMLS:C0042636"],"synonyms":[{"name":"Vibrio caused disease or disorder","type":"exact"},{"name":"Vibrio disease or disorder","type":"exact"},{"name":"Vibrio infectious disease","type":"exact"},{"name":"vibrio infectious disease","type":"exact"}],"termid":"MONDO:0007014","xrefs":{"Monarch":{"xref_id":"0007014"}}}


id: PBO:0004200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L27","termid":"PBO:0004200"}


id: FYPO:0002693
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of diamide (N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to diamide","synonyms":[{"name":"resistance to N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"},{"name":"resistance to diamide during mitotic cell cycle","type":"related"},{"name":"resistance to diamide during vegetative growth","type":"exact"},{"name":"resistant to diamide","type":"exact"}],"termid":"FYPO:0002693"}


id: GO:0050609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD+ + phosphonate = 2 H+ + NADH + phosphate.","definition_xrefs":["EC:1.20.1.1","RHEA:13173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with NAD(P)+ as acceptor","termid":"GO:0050499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphonate dehydrogenase activity","secondary_identifiers":["MetaCyc:1.20.1.1-RXN","KEGG_REACTION:R05746","UM-BBD_reactionID:r1055"],"synonyms":[{"name":"NAD-dependent phosphite dehydrogenas activity","type":"related"},{"name":"NAD:phosphite oxidoreductase activity","type":"related"},{"name":"phosphite dehydrogenase activity","type":"related"},{"name":"phosphonate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050609"}


id: PR:Q09716
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B11.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.11","synonyms":[{"name":"Spom972h-SPAC18B11.11","type":"exact"}],"termid":"PR:Q09716"}


id: GO:0098877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitter receptor to the plasma membrane in transport vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"},{"relation_name":"is_a","term_name":"vesicle-mediated transport to the plasma membrane","termid":"GO:0098876"},{"relation_name":"is_a","term_name":"neurotransmitter receptor transport","termid":"GO:0099637"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"neurotransmitter receptor transport to plasma membrane","termid":"GO:0098877"}


id: PBO:0077309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 45B","termid":"PBO:0077309"}


id: PATO:0001050
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001050 relative susceptibility (obsolete PATO:0001050)","termid":"PATO:0001050"}


id: FYPO:0001918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing trifluoperazine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0000257","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on trifluoperazine","synonyms":[{"name":"normal cell population growth in presence of trifluoperazine","type":"exact"},{"name":"normal cell population growth on trifluoperazine","type":"exact"},{"name":"normal cellular response to trifluoperazine","type":"related"},{"name":"normal vegetative cell population growth on trifluoperazine","type":"exact"}],"termid":"FYPO:0001918"}


id: GO:0006549
data:
  {"annotated_genes":["SJAG_04098","SJAG_03985","SJAG_06635","SJAG_04149","SJAG_00396","SJAG_00107","SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91025,113560,108627,103608,110743,111405,104092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901705"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving isoleucine, (2R*,3R*)-2-amino-3-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid metabolic process","termid":"GO:0009081"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00396":null,"SJAG_00830":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"isoleucine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"isoleucine metabolism","type":"exact"}],"termid":"GO:0006549","terms_by_termid":{"GO:1901705":null}}


id: MONDO:0001644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the glomeruli status post infection with nephritogenic streptococci, most often group A beta hemolytic streptococcus.","definition_xrefs":["NCIT:C35443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proliferative glomerulonephritis","termid":"MONDO:0003134"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"acute proliferative glomerulonephritis","secondary_identifiers":["DOID:13138","SCTID:197579006","ICD9:580.0","UMLS:C0341692","MEDGEN:574582"],"synonyms":[{"name":"acute glomerulonephritis with lesion of proliferative glomerulonephritis","type":"exact"},{"name":"post-streptococcal glomerulonephritis","type":"exact"},{"name":"proliferative glomerulonephritis, acute","type":"exact"}],"termid":"MONDO:0001644","xrefs":{"Monarch":{"xref_id":"0001644"}}}


id: PBO:0034214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_activates","termid":"PBO:0034214"}


id: PBO:0089804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase AMPK (gamma) subunit Cbs2","termid":"PBO:0089804"}


id: FYPO:0002811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a non-ionic osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to osmotic stress","termid":"FYPO:0000270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to non-ionic osmotic stress","synonyms":[{"name":"decreased growth during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"hypersensitive to non-ionic osmotic stress","type":"exact"},{"name":"sensitive to non-ionic osmotic stress during mitotic cell cycle","type":"related"},{"name":"sensitive to non-ionic osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002811"}


id: PBO:0063722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGR antisense RNA 1","termid":"PBO:0063722"}


id: MONDO:1011310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Developmental defect during embryogenesis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310","xrefs":{"Monarch":{"xref_id":"1011310"}}}


id: PBO:0003932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein (predicted)","termid":"PBO:0003932"}


id: GO:0033960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-methylxanthosine + H2O = 7-methylxanthine + H+ + ribofuranose.","definition_xrefs":["EC:3.2.2.25","RHEA:10880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"N-methyl nucleosidase activity","secondary_identifiers":["MetaCyc:RXN-7597","KEGG_REACTION:R07918"],"synonyms":[{"name":"7-methylxanthosine nucleosidase activity","type":"related"},{"name":"7-methylxanthosine ribohydrolase activity","type":"related"},{"name":"N-MeNase activity","type":"related"},{"name":"N-methyl nucleoside hydrolase activity","type":"related"},{"name":"methylpurine nucleosidase activity","type":"related"}],"termid":"GO:0033960"}


id: GO:0032076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nuclease activity","termid":"GO:0032074"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of deoxyribonuclease activity","synonyms":[{"name":"DNase inhibitor","type":"related"},{"name":"deoxyribonuclease inhibitor","type":"related"},{"name":"down regulation of deoxyribonuclease activity","type":"exact"},{"name":"down-regulation of deoxyribonuclease activity","type":"exact"},{"name":"downregulation of deoxyribonuclease activity","type":"exact"},{"name":"inhibition of deoxyribonuclease activity","type":"narrow"}],"termid":"GO:0032076"}


id: PBO:0046368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 4","termid":"PBO:0046368"}


id: PBO:0028030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_DNA_replication","termid":"PBO:0028030"}


id: MOD:00184
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to L-3'-bromophenylalanine.","definition_xrefs":["PubMed:2076468","RESID:AA0175","PubMed:9033387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monobrominated L-phenylalanine","termid":"MOD:00972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3'-bromophenylalanine","synonyms":[{"name":"(S)-2-amino-3-(3-bromophenyl)propanoic acid","type":"exact"},{"name":"3'BrPhe","type":"exact"},{"name":"Bromo","type":"related"},{"name":"L-3'-bromophenylalanine","type":"exact"},{"name":"bromination","type":"related"},{"name":"m-bromophenylalanine","type":"exact"},{"name":"meta-bromophenylalanine","type":"exact"}],"termid":"MOD:00184"}


id: PBO:0082239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-SNAP cochaperone; SNARE-complex adaptor for Sec18 (NSF) during the disassembly of postfusion cis-SNARE complexes; stimulates the ATPase activity of Sec18p; peripheral membrane protein required for vesicular transport between ER and Golgi, the 'priming' step in homotypic vacuole fusion, and autophagy; similar to mammalian alpha-SNAP","termid":"PBO:0082239"}


id: GO:0046243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of p-xylene (1,4-dimethylbenzene), a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete p-xylene biosynthetic process (obsolete GO:0046243)","synonyms":[{"name":"p-xylene anabolism","type":"exact"},{"name":"p-xylene biosynthesis","type":"exact"},{"name":"p-xylene biosynthetic process","type":"exact"},{"name":"p-xylene formation","type":"exact"},{"name":"p-xylene synthesis","type":"exact"},{"name":"para-xylene biosynthesis","type":"exact"},{"name":"para-xylene biosynthetic process","type":"exact"}],"termid":"GO:0046243"}


id: PBO:0016536
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YBR121C","termid":"PBO:0016536"}


id: MONDO:0001686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"borderline glaucoma","termid":"MONDO:0004744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anatomical narrow angle borderline glaucoma","secondary_identifiers":["MEDGEN:1843458","DOID:13327","UMLS:C0154941","ICD9:365.02"],"termid":"MONDO:0001686","xrefs":{"Monarch":{"xref_id":"0001686"}}}


id: MONDO:0015576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare viral disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare viral disease (obsolete MONDO:0015576)","secondary_identifiers":["Orphanet:163585"],"synonyms":[{"name":"rare viral disease","type":"exact"},{"name":"rare viral infectious disease","type":"exact"}],"termid":"MONDO:0015576","xrefs":{"Monarch":{"xref_id":"0015576"}}}


id: MOD:01566
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01566"}


id: MONDO:0017591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic interstitial pneumonia","termid":"MONDO:0002429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combined pulmonary fibrosis-emphysema syndrome","secondary_identifiers":["GARD:21238","icd11.foundation:1361267223","Orphanet:300564","UMLS:C3872815","MEDGEN:838971"],"synonyms":[{"name":"CPFE","type":"exact"}],"termid":"MONDO:0017591","xrefs":{"Monarch":{"xref_id":"0017591"}}}


id: GO:0102216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + a maltodextrin = AMP + hydrogenphosphate + a 6-phosphogluco-maltodextrin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete maltodextrin water dikinase (obsolete GO:0102216)","termid":"GO:0102216"}


id: MONDO:0005910
data:
  {"annotated_genes":["SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010600"}]},"cv_name":"mondo","definition":"Disorders in which phagocytic cells cannot kill ingested bacteria; characterized by frequent recurring infection with formulation of granulomas.","definition_xrefs":["MESH:D010585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"phagocytic cell dysfunction","termid":"MONDO:0024627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"phagocyte bactericidal dysfunction","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:14713","DOID:3262","UMLS:C0031306","EFO:0007433"],"synonyms":[{"name":"phagocytic dysfunction","type":"exact"}],"termid":"MONDO:0005910","terms_by_termid":{"MONDO:0010600":null},"xrefs":{"Monarch":{"xref_id":"0005910"}}}


id: PBO:0042387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300e molecule","termid":"PBO:0042387"}


id: PBO:0000549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine carboxypeptidase Sxa2","termid":"PBO:0000549"}


id: PBO:0056247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane anchored junction protein","termid":"PBO:0056247"}


id: PBO:0068371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 157","termid":"PBO:0068371"}


id: PBO:0005631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin/metalloprotease fusion protein (predicted)","termid":"PBO:0005631"}


id: PBO:0035742
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_nucleation_from_iMTOC","termid":"PBO:0035742"}


id: PBO:0041835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 15","termid":"PBO:0041835"}


id: PBO:0059993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 13","termid":"PBO:0059993"}


id: PBO:0056125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LysM domain containing 2","termid":"PBO:0056125"}


id: MONDO:0010353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by severe bilateral deafness, intellectual deficit, umbilical hernia and abnormal dermatoglyphics. It has been described in three males from three generations of one family. Mild facial dysmorphism (telangiectasias, hypertelorism, dental anomalies and a wide nasal root) was also present. Short stature, pancytopaenia, microcephaly, and renal and genitourinary anomalies were present in some of the patients. The mode of transmission is X-linked recessive and the causative gene has been localized to the q1-21 region of the X chromosome.","definition_xrefs":["Orphanet:85321"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness-intellectual disability, Martin-Probst type syndrome","secondary_identifiers":["DOID:0060830","GARD:16750","UMLS:C1845285","OMIM:300519","MEDGEN:375620","MESH:C564495","SCTID:721087008"],"synonyms":[{"name":"MRXSMP","type":"related"},{"name":"Martin-Probst deafness-intellectual disability syndrome","type":"related"},{"name":"Martin-Probst deafness-mental retardation syndrome","type":"related"},{"name":"Martin-Probst syndrome","type":"exact"},{"name":"X-linked deafness-intellectual disability syndrome syndrome","type":"exact"},{"name":"deafness-intellectual disability syndrome, Martin-Probst type","type":"related"},{"name":"intellectual disability, X-linked, syndromic, MARTIN-Probst type","type":"related"},{"name":"intellectual disability, X-linked, syndromic, Martin-Probst type","type":"exact"},{"name":"martin-probst syndrome, X-linked recessive","type":"exact"},{"name":"mental retardation, X-linked, syndromic, MARTIN-Probst type","type":"related"},{"name":"mental retardation, X-linked, syndromic, Martin-Probst type","type":"exact"}],"termid":"MONDO:0010353","xrefs":{"Monarch":{"xref_id":"0010353"}}}


id: PBO:0039258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 7 family member A1","termid":"PBO:0039258"}


id: PBO:0111331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, t-UTP complex subunit Utp8","termid":"PBO:0111331"}


id: GO:0140877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mevastatin , also known as compactin or ML-236B, and which acts as a potent competitive inhibitor of HMG-CoA reductase.","definition_xrefs":["PMID:12172803","PMID:12242508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"mevastatin biosynthetic process","synonyms":[{"name":"mevastatin anabolism","type":"exact"},{"name":"mevastatin biosynthesis","type":"exact"},{"name":"mevastatin formation","type":"exact"},{"name":"mevastatin synthesis","type":"exact"}],"termid":"GO:0140877"}


id: GO:0036118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the aggregation, arrangement and bonding together of a hyaluranon cable, a cable structure, surrounding some cell types (e.g. proximal or bronchial tubular epithelial cells), and composed of hyaluranon (HA), a ubiquitous connective tissue glycosaminoglycan.","definition_xrefs":["GOC:yaf","PMID:16900089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"hyaluranon cable assembly","synonyms":[{"name":"HA cable assembly","type":"exact"}],"termid":"GO:0036118"}


id: GO:1903390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle uncoating.","definition_xrefs":["GOC:PARL","GOC:pad","GO_REF:0000058","GOC:TermGenie","PMID:21563316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein depolymerization","termid":"GO:1901881"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle uncoating","termid":"GO:1903388"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle uncoating","termid":"GO:0016191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle uncoating","synonyms":[{"name":"activation of synaptic vesicle coat depolymerization","type":"narrow"},{"name":"activation of synaptic vesicle coat protein depolymerization","type":"narrow"},{"name":"activation of synaptic vesicle uncoating","type":"narrow"},{"name":"positive regulation of synaptic vesicle coat depolymerization","type":"exact"},{"name":"positive regulation of synaptic vesicle coat protein depolymerization","type":"exact"},{"name":"up regulation of synaptic vesicle coat depolymerization","type":"exact"},{"name":"up regulation of synaptic vesicle coat protein depolymerization","type":"exact"},{"name":"up regulation of synaptic vesicle uncoating","type":"exact"},{"name":"up-regulation of synaptic vesicle coat depolymerization","type":"exact"},{"name":"up-regulation of synaptic vesicle coat protein depolymerization","type":"exact"},{"name":"up-regulation of synaptic vesicle uncoating","type":"exact"},{"name":"upregulation of synaptic vesicle coat depolymerization","type":"exact"},{"name":"upregulation of synaptic vesicle coat protein depolymerization","type":"exact"},{"name":"upregulation of synaptic vesicle uncoating","type":"exact"}],"termid":"GO:1903390"}


id: GO:0044102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of deoxyribose exchange between purine deoxyribonucleoside as a donor and purine base as an acceptor.","definition_xrefs":["GOC:jl","PMID:11836245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"purine deoxyribosyltransferase activity","synonyms":[{"name":"PTD","type":"related"},{"name":"purine 2'-deoxyribosyltransferase activity","type":"exact"}],"termid":"GO:0044102"}


id: PBO:0000015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substrate_is","termid":"PBO:0000015"}


id: PATO:0002155
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rotation quality inhering in a bearer by virtue of being rotated towards the middle of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotated","termid":"PATO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medially rotated","synonyms":[{"name":"internally rotated","type":"exact"}],"termid":"PATO:0002155"}


id: PBO:0052015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JMJD4 pseudogene 1","termid":"PBO:0052015"}


id: PBO:0038930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRL3 antisense RNA 1","termid":"PBO:0038930"}


id: MONDO:0003055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade I meningioma characterized by the presence of epithelial differentiation and numerous intracellular PAS positive bodies that are rich in glycogen.","definition_xrefs":["NCIT:C4718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory meningioma","secondary_identifiers":["DOID:4588","UMLS:C1384406","MEDGEN:277998"],"synonyms":[{"name":"secretory meningioma","type":"exact"},{"name":"secretory meningioma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003055","xrefs":{"Monarch":{"xref_id":"0003055"}}}


id: PATO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an bearer by virtue of the bearer's extension in two dimensions.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-D extent","synonyms":[{"name":"2-D size","type":"exact"}],"termid":"PATO:0001709"}


id: PBO:0017774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Nnf1","termid":"PBO:0017774"}


id: MONDO:0013227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital plasminogen activator inhibitor type 1 (PAI-1) deficiency is a rare genetic bleeding disorder characterized by premature lysis of hemostatic clots and a moderate bleeding tendency.","definition_xrefs":["Orphanet:465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital plasminogen activator inhibitor type 1 deficiency","secondary_identifiers":["NANDO:2200688","UMLS:C2750067","icd11.foundation:428643962","MESH:C567640","NCIT:C133884","SCTID:717407006","GARD:4381","MEDGEN:412870","OMIM:613329"],"synonyms":[{"name":"congenital PAI-1 deficiency","type":"exact"},{"name":"congenital plasminogen activator inhibitor type 1 deficiency","type":"exact"},{"name":"hyperfibrinolysis due to Pai1 deficiency","type":"related"},{"name":"plasminogen activator INHIBITOR-1 deficiency","type":"related"},{"name":"plasminogen activator inhibitor type 1 deficiency","type":"related"}],"termid":"MONDO:0013227","xrefs":{"Monarch":{"xref_id":"0013227"}}}


id: PBO:0046367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTPD3 antisense RNA 1","termid":"PBO:0046367"}


id: GO:0035731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a dinitrosyl-iron complex. Nitric oxide (NO) is stored as dinitrosyl-iron complexes, which form spontaneously from Glutathione (GSH), S-nitrosoglutathione, and trace amounts of ferrous ions, or by reaction of iron-sulfur centers with NO.","definition_xrefs":["GOC:BHF","PMID:10534443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal cluster binding","termid":"GO:0051540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dinitrosyl-iron complex binding","synonyms":[{"name":"DNDGIC binding","type":"exact"},{"name":"DNIC binding","type":"exact"},{"name":"dinitrosyl-diglutathionyl-iron complex binding","type":"exact"}],"termid":"GO:0035731"}


id: PBO:0054470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1870","termid":"PBO:0054470"}


id: GO:0045339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of farnesyl diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"},{"relation_name":"is_a","term_name":"farnesyl diphosphate metabolic process","termid":"GO:0045338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"farnesyl diphosphate catabolic process","synonyms":[{"name":"farnesyl diphosphate breakdown","type":"exact"},{"name":"farnesyl diphosphate catabolism","type":"exact"},{"name":"farnesyl diphosphate degradation","type":"exact"}],"termid":"GO:0045339"}


id: PBO:0082807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of UDP-GlcNAc transferase; required for second step of dolichyl-linked oligosaccharide synthesis; anchors catalytic subunit Alg13p to ER membrane; similar to bacterial and human glycosyltransferases; both human homologs ALG13 and ALG14 are required to complement yeast alg14 mutant; mutations of human ALG14 cause congenital myasthenic syndrome","termid":"PBO:0082807"}


id: MONDO:0005191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that has spread from its primary site to another anatomic site. Melanomas frequently metastasize to lymph nodes, liver, lungs, and brain.","definition_xrefs":["NCIT:C8925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metastatic melanoma","secondary_identifiers":["EFO:0002617","UMLS:C0278883","SCTID:443493003","MEDGEN:83002"],"synonyms":[{"name":"metastatic malignant melanoma","type":"exact"},{"name":"metastatic melanoma","type":"exact"}],"termid":"MONDO:0005191","xrefs":{"Monarch":{"xref_id":"0005191"}}}


id: PBO:0088228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydantoin racemase family","termid":"PBO:0088228"}


id: GO:0071967
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glucosyl-heptosyl2-KDO2-lipid A-phosphate + ADP-L-glycero-beta-D-manno-heptose = glucosyl-heptosyl3-KDO2-lipid A-phosphate + ADP + H+.","definition_xrefs":["MetaCyc:RXN0-5122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopolysaccharide heptosyltransferase activity","termid":"GO:0008920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"lipopolysaccharide core heptosyltransferase activity","secondary_identifiers":["RHEA:29923"],"synonyms":[{"name":"LPS core heptosyltransferase activity","type":"exact"}],"termid":"GO:0071967"}


id: PBO:0027425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_ionizing_radiation","termid":"PBO:0027425"}


id: GO:0042826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to histone deacetylase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"histone deacetylase binding","termid":"GO:0042826"}


id: FYPO:0000540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal protein transport","termid":"FYPO:0005744"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein transport during vegetative growth","synonyms":[{"name":"abnormal protein transport during mitotic cell cycle","type":"related"},{"name":"protein transport: abnormal","type":"related"}],"termid":"FYPO:0000540"}


id: MONDO:0019141
data:
  {"annotated_genes":["SJAG_01474","SJAG_04865"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87451,87450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008293"}]},"cv_name":"mondo","definition":"Porokeratosis of Mibelli (PM) is a form of porokeratosis that is characterized by the presence of brown single or multiple annular plaques of varying size, that are sometimes confluent, with a distinctive sharply-defined keratotic border.","definition_xrefs":["Orphanet:735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porokeratosis","termid":"MONDO:0006602"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01474":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis of Mibelli","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:757.39","GARD:4438","SCTID:80432009","UMLS:C0949506","MEDGEN:181842"],"termid":"MONDO:0019141","terms_by_termid":{"MONDO:0008293":null},"xrefs":{"Monarch":{"xref_id":"0019141"}}}


id: PBO:0005373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Iec3","termid":"PBO:0005373"}


id: MONDO:1040034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by variants in the PDE6G gene.","definition_xrefs":["PMID:37363133","PMID:8638127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"PDE6G-related retinopathy","synonyms":[{"name":"PDE6G-related retinopathy","type":"exact"}],"termid":"MONDO:1040034","xrefs":{"Monarch":{"xref_id":"1040034"}}}


id: GO:0043338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate + CTP + H+ = CDP-2,3-bis-O-(geranylgeranyl)-sn-glycerol + diphosphate.","definition_xrefs":["RHEA:25690","GOC:jl","PMID:10960477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase activity","secondary_identifiers":["EC:2.7.7.67"],"synonyms":[{"name":"CDP-2,3-di-O-geranylgeranyl-sn-glycerol synthase","type":"broad"},{"name":"CTP:2,3-di-O-geranylgeranyl-sn-glycero-1-phosphate cytidyltransferase activity","type":"exact"}],"termid":"GO:0043338"}


id: PBO:0073418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senataxin","termid":"PBO:0073418"}


id: FYPO:0006319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the extent of DNA resection upstream of a stalled replication fork is normal (i.e. indistinguishable from wild type). DNA resection is the 5'-to-3' degradation of one strand of DNA, leaving a stretch of single-stranded DNA.","definition_xrefs":["PomBase:mah","PMID:29215009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal extent of DNA resection during replication fork processing","synonyms":[{"name":"normal DNA resectioning during replication fork processing","type":"related"},{"name":"normal extent of DNA resection during replication fork processing during mitotic cell cycle","type":"related"},{"name":"normal extent of DNA resection during replication fork processing during vegetative growth","type":"exact"},{"name":"normal extent of exonucleolytic DNA cleavage during replication fork processing","type":"exact"}],"termid":"FYPO:0006319"}


id: RO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"X outer_layer_of Y iff:\\n. X :continuant that bearer_of some PATO:laminar\\n. X part_of Y\\n. exists Z :surface\\n. X has_boundary Z\\n. Z boundary_of Y\\n\\nhas_boundary: http://purl.obolibrary.org/obo/RO_0002002\\nboundary_of: http://purl.obolibrary.org/obo/RO_0002000","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bounding_layer_of","termid":"RO:0002007"}


id: GO:0015186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-glutamine from one side of a membrane to the other. L-glutamine is 2-amino-4-carbamoylbutanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-glutamine transmembrane transporter activity","synonyms":[{"name":"asparagine/glutamine permease activity","type":"narrow"}],"termid":"GO:0015186"}


id: PBO:0062971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 3","termid":"PBO:0062971"}


id: PBO:0066798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 97","termid":"PBO:0066798"}


id: FYPO:0001562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular histidine level","secondary_identifiers":["FYPO:0001620"],"synonyms":[{"name":"decreased cellular L-histidine level","type":"exact"},{"name":"decreased cellular histidine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular histidine level during vegetative growth","type":"exact"},{"name":"decreased histidine accumulation","type":"related"},{"name":"reduced cellular histidine level","type":"exact"}],"termid":"FYPO:0001562"}


id: PBO:0053135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain binding 2","termid":"PBO:0053135"}


id: MONDO:0020092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare idiopathic male infertility (obsolete MONDO:0020092)","secondary_identifiers":["Orphanet:98345"],"termid":"MONDO:0020092","xrefs":{"Monarch":{"xref_id":"0020092"}}}


id: GO:0099068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a postsynapse.","definition_xrefs":["GOC:dos","GOC:bf","GOCL:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"postsynapse organization","termid":"GO:0099173"},{"relation_name":"part_of","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"postsynapse assembly","synonyms":[{"name":"postsynapse biogenesis","type":"exact"}],"termid":"GO:0099068"}


id: PBO:0085926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to both the endoplasmic reticulum and vacuole","termid":"PBO:0085926"}


id: GO:0022008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of cells within the nervous system.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurogenesis","secondary_identifiers":["Wikipedia:Neurogenesis"],"synonyms":[{"name":"nervous system cell generation","type":"exact"},{"name":"neural cell differentiation","type":"related"}],"termid":"GO:0022008"}


id: PBO:0031879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glycine transporter Hem25 (predicted)","termid":"PBO:0031879"}


id: SO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a leucoplast, a colorless plastid generally containing starch or oil.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_sequence","termid":"SO:0000740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucoplast_sequence","synonyms":[{"name":"leucoplast sequence","type":"exact"}],"termid":"SO:0000747"}


id: GO:1901876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion binding.","definition_xrefs":["GOC:TermGenie","PMID:16432188","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion binding","synonyms":[{"name":"regulation of calcium ion storage activity","type":"related"}],"termid":"GO:1901876"}


id: PBO:0048798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha q pseudogene 1","termid":"PBO:0048798"}


id: GO:0000060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein transport process that contributes to protein import into the nucleus, and that results in the vectorial transfer of a cargo-carrier protein complex through the nuclear pore complex from the cytoplasmic side to the nucleoplasmic side of the nuclear envelope.","definition_xrefs":["GOC:curators","ISBN:0198506732","PMID:9126736","PMID:14570049"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into nucleus, translocation (obsolete GO:0000060)","synonyms":[{"name":"protein import into cell nucleus, translocation","type":"exact"},{"name":"protein translocation during protein import into nucleus","type":"exact"},{"name":"protein translocation during protein transport from cytoplasm to nucleus","type":"exact"},{"name":"protein translocation during protein-nucleus import","type":"exact"},{"name":"protein transport from cytoplasm to nucleus, translocation","type":"exact"},{"name":"protein-nucleus import, translocation","type":"exact"}],"termid":"GO:0000060"}


id: GO:0036500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the endoplasmic reticulum membrane stress sensor ATF6 (activating transcription factor 6). Begins with activation of ATF6 in response to endoplasmic reticulum (ER) stress, and ends with regulation of a downstream cellular process, e.g. transcription. Under conditions of endoplasmic reticulum stress, ATF6 translocates to the Golgi where it is processed by proteases to release a cytoplasmic domain (ATF6f), which operates as a transcriptional activator of many genes required to restore folding capacity.","definition_xrefs":["GOC:PARL","PMID:22013210","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ATF6-mediated unfolded protein response","secondary_identifiers":["Reactome:R-HSA-381033"],"synonyms":[{"name":"ATF6 branch of UPR","type":"exact"},{"name":"ATF6 signal transduction pathway","type":"broad"},{"name":"ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"ATF6-alpha UPR branch","type":"narrow"},{"name":"ATF6-beta UPR branch","type":"narrow"},{"name":"UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"}],"termid":"GO:0036500"}


id: GO:0002826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a T-helper 1 type immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 type immune response","termid":"GO:0002825"},{"relation_name":"negatively_regulates","term_name":"T-helper 1 type immune response","termid":"GO:0042088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T-helper 1 type immune response","synonyms":[{"name":"down regulation of T-helper 1 type immune response","type":"exact"},{"name":"down-regulation of T-helper 1 type immune response","type":"exact"},{"name":"downregulation of T-helper 1 type immune response","type":"exact"},{"name":"inhibition of T-helper 1 type immune response","type":"narrow"}],"termid":"GO:0002826"}


id: PBO:0074848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 38A","termid":"PBO:0074848"}


id: GO:0033120
data:
  {"annotated_genes":["SJAG_03279","SJAG_01040","SJAG_01919","SJAG_02058","SJAG_00996","SJAG_02018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89816,118714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[111236,92502,74432,75691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of RNA splicing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"regulation of RNA splicing","termid":"GO:0043484"},{"relation_name":"positively_regulates","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00996":null,"SJAG_01040":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null,"SJAG_03279":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of RNA splicing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033120","terms_by_termid":{"GO:0048026":null,"GO:1905746":null}}


id: PBO:0070561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 27","termid":"PBO:0070561"}


id: PBO:0081235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYND-type containing 19 pseudogene 1","termid":"PBO:0081235"}


id: FYPO:0007532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which arrested replication forks do not colocalize with nuclear pore complexes (NPCs) longer than actively replicating forks. Normally, arrested replication forks relocate to NPCs as part of replication fork processing, and remain anchored at NPCs while recombination-dependent replication takes place.","definition_xrefs":["PomBase:mah","PMID:33159083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased replication fork colocalization with nuclear pore complex","synonyms":[{"name":"decreased replication fork colocalization with NPC","type":"exact"},{"name":"decreased replication fork colocalization with nuclear pore","type":"exact"},{"name":"decreased replication fork colocalization with nuclear pore complex during mitotic S phase","type":"exact"},{"name":"decreased replication fork colocalization with nuclear pore complex during mitotic cell cycle","type":"related"},{"name":"decreased replication fork colocalization with nuclear pore complex during vegetative growth","type":"exact"},{"name":"decreased replication fork relocation to nuclear pore complex","type":"exact"},{"name":"decreased replication fork relocation to nuclear pore complex during mitotic S phase","type":"exact"},{"name":"reduced replication fork colocalization with nuclear pore complex","type":"exact"}],"termid":"FYPO:0007532"}


id: GO:0016835
data:
  {"annotated_genes":["SJAG_04404","SJAG_04843","SJAG_02293","SJAG_00337","SJAG_00432","SJAG_02106","SJAG_03124","SJAG_03588","SJAG_06611","SJAG_03724","SJAG_04674","SJAG_02689","SJAG_00305","SJAG_02972","SJAG_03243","SJAG_05283","SJAG_00461","SJAG_03669","SJAG_05007","SJAG_01574","SJAG_03485","SJAG_02369","SJAG_02988","SJAG_00592","SJAG_04107","SJAG_03213","SJAG_04098","SJAG_01372","SJAG_16460","SJAG_02107","SJAG_01300","SJAG_02084","SJAG_01630"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59927,75005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019171"},{"annotations":[60125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003855"},{"annotations":[60126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003856"},{"annotations":[59353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003861"},{"annotations":[96211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051575"},{"annotations":[74122,73507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003994"},{"annotations":[77872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047453"},{"annotations":[77915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004089"},{"annotations":[72990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004107"},{"annotations":[65846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140078"},{"annotations":[71561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004160"},{"annotations":[79657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004333"},{"annotations":[61044,73291,74834,59282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019172"},{"annotations":[64429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004409"},{"annotations":[76190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004424"},{"annotations":[80461,78672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046570"},{"annotations":[110818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051009"},{"annotations":[77352,70144,70714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004634"},{"annotations":[71981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004655"},{"annotations":[78269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004664"},{"annotations":[80012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004730"},{"annotations":[77358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004795"},{"annotations":[80695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061503"},{"annotations":[73642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004834"},{"annotations":[75130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004852"},{"annotations":[61515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102158"}]},"cv_name":"molecular_function","definition":"Catalysis of the breakage of a carbon-oxygen bond.","definition_xrefs":["EC:4.2.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00305":null,"SJAG_00337":null,"SJAG_00432":null,"SJAG_00461":null,"SJAG_00592":null,"SJAG_01300":null,"SJAG_01372":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_02084":null,"SJAG_02106":null,"SJAG_02107":null,"SJAG_02293":null,"SJAG_02369":null,"SJAG_02689":null,"SJAG_02972":null,"SJAG_02988":null,"SJAG_03124":null,"SJAG_03213":null,"SJAG_03243":null,"SJAG_03485":null,"SJAG_03588":null,"SJAG_03669":null,"SJAG_03724":null,"SJAG_04098":null,"SJAG_04107":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04843":null,"SJAG_05007":null,"SJAG_05283":null,"SJAG_06611":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"carbon-oxygen lyase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"other carbon-oxygen lyase activity","type":"narrow"}],"termid":"GO:0016835","terms_by_termid":{"GO:0003855":null,"GO:0003856":null,"GO:0003861":null,"GO:0003994":null,"GO:0004089":null,"GO:0004107":null,"GO:0004160":null,"GO:0004333":null,"GO:0004409":null,"GO:0004424":null,"GO:0004634":null,"GO:0004655":null,"GO:0004664":null,"GO:0004730":null,"GO:0004795":null,"GO:0004834":null,"GO:0004852":null,"GO:0019171":null,"GO:0019172":null,"GO:0046570":null,"GO:0047453":null,"GO:0051009":null,"GO:0051575":null,"GO:0061503":null,"GO:0102158":null,"GO:0140078":null}}


id: PBO:0053871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1147","termid":"PBO:0053871"}


id: PBO:0040517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axin 1","termid":"PBO:0040517"}


id: PBO:0074356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC3 pseudogene 1","termid":"PBO:0074356"}


id: FYPO:0003716
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to Skb1-containing lateral cortical nodes is abolished, and the protein is present in the nucleus instead.","definition_xrefs":["PomBase:mah","PMID:25009287"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"is_a","term_name":"abolished protein localization to lateral cortical node","termid":"FYPO:0003713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to lateral cortical node, with protein mislocalized to nucleus","synonyms":[{"name":"abolished protein localisation to lateral cortical node, with protein mislocalised to nucleus","type":"exact"},{"name":"abolished protein localization to lateral cortical node, with protein mislocalized to nucleus, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to lateral cortical node, with protein mislocalized to nucleus, during vegetative growth","type":"exact"},{"name":"protein localization to lateral cortical node abolished, with protein mislocalized to nucleus","type":"exact"}],"termid":"FYPO:0003716"}


id: MONDO:0008073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare kidney disorder characterized by hyperuricemia, progressive nephropathy, and gout occurring at an early age.","definition_xrefs":["Orphanet:209886"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant medullary cystic kidney disease with or without hyperuricemia","termid":"MONDO:0008264"},{"relation_name":"is_a","term_name":"familial juvenile hyperuricemic nephropathy","termid":"MONDO:0000608"},{"relation_name":"is_a","term_name":"autosomal dominant medullary cystic kidney disease with or without hyperuricemia","termid":"MONDO:0008264"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005066","MONDO:0005240","MONDO:0019254"],"is_obsolete":false,"name":"familial juvenile hyperuricemic nephropathy type 1","secondary_identifiers":["UMLS:C4551496","OMIM:162000","MEDGEN:1645893","NCIT:C123172","OMIM:603860","Orphanet:88950","SCTID:445503007","OMIM:609886","MESH:C563693","NORD:827","GARD:10679"],"synonyms":[{"name":"ADMCKD2","type":"related"},{"name":"ADTKD-UMOD","type":"exact"},{"name":"Autosomal Dominant Tubulo-Interstitial Kidney Disease","type":"exact"},{"name":"FJHN type 1","type":"exact"},{"name":"HNFJ1","type":"exact"},{"name":"MCKD2","type":"related"},{"name":"UMOD familial juvenile hyperuricemic nephropathy","type":"exact"},{"name":"UMOD-associated FJHN","type":"exact"},{"name":"UMOD-associated familial juvenile hyperuricemic nephropathy","type":"exact"},{"name":"UMOD-related ADTKD","type":"exact"},{"name":"UMOD-related autosomal dominant tubulointerstitial kidney disease","type":"related"},{"name":"UMOD-related kidney disease","type":"exact"},{"name":"autosomal dominant medullary cystic kidney disease type 2","type":"exact"},{"name":"autosomal dominant medullary cystic kidney disease with hyperuricemia","type":"exact"},{"name":"autosomal dominant tubulointerstitial kidney disease - UMOD","type":"exact"},{"name":"autosomal dominant tubulointerstitial kidney disease due to mutations in UMOD","type":"exact"},{"name":"familial juvenile gouty nephropathy","type":"broad"},{"name":"familial juvenile hyperuricaemic nephropathy","type":"related"},{"name":"familial juvenile hyperuricemic nephropathy caused by mutation in UMOD","type":"exact"},{"name":"familial nephropathy with gout","type":"broad"},{"name":"glomerulocystic kidney disease with hyperuricemia and isosthenuria","type":"exact"},{"name":"gouty nephropathy, familial juvenile","type":"broad"},{"name":"hyperuricemic nephropathy, familial juvenile","type":"broad"},{"name":"hyperuricemic nephropathy, familial juvenile, 1","type":"exact"},{"name":"hyperuricemic nephropathy, familial juvenile, type 1","type":"exact"},{"name":"medullary cystic kidney disease 2","type":"exact"},{"name":"medullary cystic kidney disease 2, autosomal dominant","type":"related"},{"name":"medullary cystic kidney disease type 2","type":"exact"},{"name":"medullary cystic kidney disease type II","type":"exact"},{"name":"nephropathy, familial, with gout","type":"broad"},{"name":"tubulointerstitial kidney disease, autosomal dominant, 1","type":"exact"},{"name":"uromodulin storage disease","type":"exact"},{"name":"uromodulin-associated kidney disease","type":"exact"}],"termid":"MONDO:0008073","xrefs":{"Monarch":{"xref_id":"0008073"}}}


id: PBO:0025534
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypophosphatasia","termid":"PBO:0025534"}


id: PBO:0082065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-ketosphinganine reductase; catalyzes the second step in phytosphingosine synthesis; essential for growth in the absence of exogenous dihydrosphingosine or phytosphingosine; localized to lipid droplets; member of short chain dehydrogenase/reductase protein family; mutations in human homolog KDSR cause recessive progressive symmetric erythrokeratoderma","termid":"PBO:0082065"}


id: MONDO:0013528
data:
  {"annotated_genes":["SJAG_02717"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86298],"is_not":false,"summary":null,"term":"MONDO:0013528"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the TECR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22549","OMIM:614020","UMLS:C3151462","DOID:0081188","MEDGEN:462812"],"synonyms":[{"name":"MRT14","type":"related"},{"name":"TECR autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in TECR","type":"exact"},{"name":"intellectual disability, autosomal recessive 14","type":"exact"},{"name":"intellectual disability, autosomal recessive type 14","type":"exact"},{"name":"mental retardation, autosomal recessive 14","type":"related"},{"name":"mental retardation, autosomal recessive type 14","type":"exact"}],"termid":"MONDO:0013528","terms_by_termid":{"MONDO:0013528":null},"xrefs":{"Monarch":{"xref_id":"0013528"}}}


id: PBO:0069048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 294, pseudogene","termid":"PBO:0069048"}


id: PBO:0048919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member O","termid":"PBO:0048919"}


id: GO:0006277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the number of copies of a gene is increased in certain cells as extra copies of DNA are made in response to certain signals of cell development or of stress from the environment.","definition_xrefs":["ISBN:0721601464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA amplification","termid":"GO:0006277"}


id: FYPO:0002024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is elongated, has no septum, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002049"},{"relation_name":"is_a","term_name":"inviable elongated aseptate cell","termid":"FYPO:0002066"},{"relation_name":"is_a","term_name":"inviable multinucleate aseptate vegetative cell","termid":"FYPO:0004106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0005447","FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0000032","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"inviable elongated multinucleate aseptate vegetative cell","synonyms":[{"name":"elongated multinucleate aseptate inviable vegetative cell","type":"exact"},{"name":"inviable elongated multinucleate aseptate cell during vegetative growth","type":"exact"},{"name":"inviable elongated multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; elongated multinucleate aseptate vegetative cell","type":"exact"},{"name":"septation initiation defective","type":"related"},{"name":"sid","type":"related"}],"termid":"FYPO:0002024"}


id: SO:0000502
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence that is transcribed. This region may cover the transcript of a gene, it may emcompas the sequence covered by all of the transcripts of a alternately spliced gene, or it may cover the region transcribed by a polycistronic transcript. A gene may have 1 or more transcribed regions and a transcribed_region may belong to one or more genes.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000502 transcribed_region (obsolete SO:0000502)","termid":"SO:0000502"}


id: GO:0047770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + acceptor + H2O = a carboxylate + reduced acceptor.","definition_xrefs":["EC:1.2.99.6","MetaCyc:CARBOXYLATE-REDUCTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"carboxylate reductase activity","synonyms":[{"name":"aldehyde:(acceptor) oxidoreductase activity","type":"related"},{"name":"aldehyde:acceptor oxidoreductase activity","type":"related"},{"name":"carboxylic acid reductase activity","type":"related"}],"termid":"GO:0047770"}


id: PBO:0064057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 91","termid":"PBO:0064057"}


id: PBO:0114504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, GPI anchored","termid":"PBO:0114504"}


id: PBO:0059972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 17","termid":"PBO:0059972"}


id: PBO:0083652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease involved in DNA recombination and repair; subunit of a complex, with Slx4p, that hydrolyzes 5' branches from duplex DNA in response to stalled or converging replication forks; function overlaps with that of Sgs1p-Top3p","termid":"PBO:0083652"}


id: PBO:0080777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 8","termid":"PBO:0080777"}


id: FYPO:0006440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a protein kinase activity is absent during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein kinase activity","termid":"FYPO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein kinase activity during cellular response to hydroxyurea","synonyms":[{"name":"abolished protein kinase activity during cellular response to HU","type":"exact"},{"name":"protein kinase activity abolished during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006440"}


id: PBO:0005515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp4 (predicted)","termid":"PBO:0005515"}


id: GO:0140376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Receiving a signal and transmitting it in a cell to initiate an innate immune response.","definition_xrefs":["PMID:28921463","PMID:31415752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"innate immune receptor activity","termid":"GO:0140376"}


id: PBO:0071968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase B1","termid":"PBO:0071968"}


id: PBO:0113473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2, a regulator of plasma membrane (PM) homeostasis; TORC2 also regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; interacts with Slm1p and Slm2p, homologous PH domain-containing TORC2 substrates; PM retention is dependent on Avo3p","termid":"PBO:0113473"}


id: PBO:0026668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_phase_transition","termid":"PBO:0026668"}


id: MONDO:1011851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital neuromuscular disease, non-human animal","secondary_identifiers":["OMIA:000718"],"termid":"MONDO:1011851","xrefs":{"Monarch":{"xref_id":"1011851"}}}


id: GO:0061741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chaperone-mediated protein transport process in which a protein that is bound to a chaperone and a lysosomal receptor is unfolded and transported into the lysosome as part of chaperone-mediated autophagy.","definition_xrefs":["GOC:autophagy","GOC:pad","GOC:dph","GOC:PARL","PMID:22748206"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperone-mediated protein transport involved in chaperone-mediated autophagy (obsolete GO:0061741)","termid":"GO:0061741"}


id: GO:0097295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of morphine, 17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol. Morphine is a highly potent opiate analgesic psychoactive drug obtained form the opium poppy, Papaver somniferum.","definition_xrefs":["PMID:19567876","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid biosynthetic process","termid":"GO:0033075"},{"relation_name":"is_a","term_name":"morphine metabolic process","termid":"GO:0071272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"morphine biosynthetic process","synonyms":[{"name":"morphine anabolism","type":"exact"},{"name":"morphine biosynthesis","type":"exact"},{"name":"morphine formation","type":"exact"},{"name":"morphine synthesis","type":"exact"}],"termid":"GO:0097295"}


id: MONDO:0003554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An unusual colon carcinoma characterized by the presence of glandular and squamous carcinomatous components. The two carcinomatous components may be admixed within the tumor, or the two may appear separately in different areas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal adenosquamous carcinoma","termid":"MONDO:0006157"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of colon","termid":"MONDO:0018513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"adenosquamous colon carcinoma","secondary_identifiers":["MEDGEN:232083","NCIT:C5491","DOID:5629","UMLS:C1333082"],"synonyms":[{"name":"adenosquamous carcinoma of colon","type":"exact"},{"name":"adenosquamous carcinoma of the colon","type":"exact"},{"name":"adenosquamous colon carcinoma","type":"exact"},{"name":"colon adenosquamous cancer","type":"exact"},{"name":"colon adenosquamous carcinoma","type":"exact"},{"name":"colonic adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0003554","xrefs":{"Monarch":{"xref_id":"0003554"}}}


id: PBO:0075107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 156","termid":"PBO:0075107"}


id: PBO:0084735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermediate peptidase; cleaves destabilizing N-terminal residues of a subset of proteins upon import, after their cleavage by mitochondrial processing peptidase (Mas1p-Mas2p); may contribute to mitochondrial iron homeostasis","termid":"PBO:0084735"}


id: PBO:0058139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4436b-1","termid":"PBO:0058139"}


id: GO:0007476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the imaginal disc-derived wing are generated and organized. The wing is an appendage modified for flying.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"},{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"part_of","term_name":"wing disc morphogenesis","termid":"GO:0007472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing morphogenesis","synonyms":[{"name":"wing morphogenesis","type":"exact"}],"termid":"GO:0007476"}


id: PBO:0079750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine-cytidine kinase 1","termid":"PBO:0079750"}


id: PBO:0061167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Leu (TAA) 5-1","termid":"PBO:0061167"}


id: RO:0002018
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"w 'has process component' p if p and w are processes,  w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component","termid":"RO:0002180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component_process","termid":"RO:0002018"}


id: PBO:0117160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH4 antisense RNA 2","termid":"PBO:0117160"}


id: GO:0060790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which the tooth placode forms. A tooth placode is a thickening of the ectoderm that will give rise to the tooth bud.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tooth placode formation","termid":"GO:0060790"}


id: PBO:0060013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 1","termid":"PBO:0060013"}


id: PBO:0088838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-di-phosphooligosaccharide-protein glycotransferase subunit Wbp1","termid":"PBO:0088838"}


id: GO:0036131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin D2 + H+ + NADPH = 11-epi-prostaglandin F2alpha + NADP+.","definition_xrefs":["PMID:3862115","RHEA:45316","PMID:1504718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"prostaglandin D2 11-ketoreductase activity","secondary_identifiers":["KEGG_REACTION:R02799","Reactome:R-HSA-2161614"],"synonyms":[{"name":"PGD2 11-ketoreductase","type":"exact"},{"name":"prostaglandin 11-keto reductase","type":"exact"}],"termid":"GO:0036131"}


id: GO:1990912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a microwave radiation stimulus.","definition_xrefs":["PMID:21241601"],"gene_count":0,"genotype_count":0,"name":"obsolete response to microwave radiation (obsolete GO:1990912)","termid":"GO:1990912"}


id: PBO:0067856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 158","termid":"PBO:0067856"}


id: PBO:0001824
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.87","termid":"PBO:0001824"}


id: MONDO:0004976
data:
  {"annotated_genes":["SJAG_00053","SJAG_01317","SJAG_03345","SJAG_02242","SJAG_04178","SJAG_00668","SJAG_03170","SJAG_02289","SJAG_03598","SJAG_02509","SJAG_03923","SJAG_07000","SJAG_04489","SJAG_02695","SJAG_04387"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859529"},{"annotations":[85597,87626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007103"},{"annotations":[87128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012945"},{"annotations":[87239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010459"},{"annotations":[86004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013715"},{"annotations":[85751,85750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014531"},{"annotations":[86863,86864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011223"},{"annotations":[86990,86991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012077"},{"annotations":[87095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[85678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[87616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"}]},"cv_name":"mondo","definition":"Amyotrophic lateral sclerosis (ALS) is a neurodegenerative disease characterized by progressive muscular paralysis reflecting degeneration of motor neurons in the primary motor cortex, corticospinal tracts, brainstem and spinal cord.","definition_xrefs":["Orphanet:803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior horn disorder","termid":"MONDO:0003182"},{"relation_name":"is_a","term_name":"motor neuron disorder","termid":"MONDO:0020128"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00668":null,"SJAG_01317":null,"SJAG_02242":null,"SJAG_02289":null,"SJAG_02509":null,"SJAG_02695":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03598":null,"SJAG_03923":null,"SJAG_04178":null,"SJAG_04387":null,"SJAG_04489":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0007354","NCIT:C34373","UMLS:C0002736","GARD:5786","MEDGEN:274","NIFSTD:birnlex_12566","icd11.foundation:1982355687","MESH:D000690","SCTID:86044005","ICD10CM:G12.21","DOID:332","MedDRA:10002026","NORD:768","ICD9:335.20","NANDO:1200002"],"synonyms":[{"name":"ALS","type":"exact"},{"name":"Charcot disease","type":"exact"},{"name":"Lou Gehrig disease","type":"exact"},{"name":"Lou Gehrig's disease","type":"exact"},{"name":"amyotrophic lateral sclerosis","type":"exact"},{"name":"motor neuron disease, bulbar","type":"exact"}],"termid":"MONDO:0004976","terms_by_termid":{"MONDO:0007103":null,"MONDO:0008458":null,"MONDO:0010459":null,"MONDO:0010936":null,"MONDO:0011223":null,"MONDO:0012077":null,"MONDO:0012945":null,"MONDO:0013501":null,"MONDO:0013715":null,"MONDO:0014531":null,"MONDO:0859529":null},"xrefs":{"Monarch":{"xref_id":"0004976"}}}


id: GO:0000489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0000489"}


id: FYPO:0000434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which fermentation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal fermentation","synonyms":[{"name":"fermentative metabolism: normal","type":"related"},{"name":"normal fermentation during mitotic cell cycle","type":"related"},{"name":"normal fermentation during vegetative growth","type":"exact"},{"name":"normal fermentative metabolism","type":"exact"}],"termid":"FYPO:0000434"}


id: PBO:0079701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubinuclein 2","termid":"PBO:0079701"}


id: PBO:0005544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA export factor Rsm1","termid":"PBO:0005544"}


id: PR:Q9UT10
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ski7 gene.","definition_xrefs":["UniProtKB:Q9UT10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GTP-binding protein P8A3.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.05","synonyms":[{"name":"Spom972h-ski7","type":"exact"}],"termid":"PR:Q9UT10"}


id: MONDO:1010639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor XII deficiency that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor XII deficiency, non-human animal","termid":"MONDO:1010074"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor XII deficiency, dog","secondary_identifiers":["OMIA:000364-9615"],"termid":"MONDO:1010639","xrefs":{"Monarch":{"xref_id":"1010639"}}}


id: PBO:0052936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 21-4, pseudogene","termid":"PBO:0052936"}


id: MONDO:0002917
data:
  {"annotated_genes":["SJAG_00155","SJAG_03126","SJAG_01202","SJAG_00624","SJAG_03469","SJAG_02536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014027"},{"annotations":[86793,86794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014384"},{"annotations":[86616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032649"},{"annotations":[85866,85867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","definition":"A disease that involves the pilosebaceous unit.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00155":null,"SJAG_00624":null,"SJAG_01202":null,"SJAG_02536":null,"SJAG_03126":null,"SJAG_03469":null},"genotype_count":0,"is_obsolete":false,"name":"disorder of pilosebaceous unit","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D006201","ICD9:704.9","MEDGEN:640417","NCIT:C34656","SCTID:201128002","DOID:421","ICD9:704.8","UMLS:C0554472"],"synonyms":[{"name":"disease of pilosebaceous unit","type":"exact"},{"name":"disease or disorder of pilosebaceous unit","type":"exact"},{"name":"disorder of pilosebaceous unit","type":"exact"},{"name":"hair and hair follicle diseases","type":"exact"},{"name":"hair disease","type":"narrow"},{"name":"hair disorder","type":"exact"},{"name":"hair/hair follicle diseases","type":"exact"},{"name":"pilosebaceous unit disease","type":"exact"},{"name":"pilosebaceous unit disease or disorder","type":"exact"}],"termid":"MONDO:0002917","terms_by_termid":{"MONDO:0014027":null,"MONDO:0014384":null,"MONDO:0032649":null,"MONDO:0054588":null},"xrefs":{"Monarch":{"xref_id":"0002917"}}}


