# terms

id: PBO:0004477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nem1-Spo7 phosphatase complex catalytic subunit Nem1 (predicted)","termid":"PBO:0004477"}


id: PATO:0005015
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an entity or set of entities in which size increases or decreases along the extent of the entity or set.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tapered size","synonyms":[{"name":"gradient of size","type":"exact"}],"termid":"PATO:0005015"}


id: MONDO:0015315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neonatal brainstem dysfunction is a rare neurologic disease characterized by the association of suction-swallowing dysfunction, abnormal laryngeal sensitivity and motility (manifesting with dyspnea or obstructive apnea-hypopnea), gastroesophageal reflux (generally resistant to medication) and cardiac vagal overactivity (e.g. brachycardia, vasovagal episodes) of varying degrees of severity. Impaired social interaction has also been reported.","definition_xrefs":["Orphanet:137929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal brainstem dysfunction","secondary_identifiers":["MEDGEN:1665998","GARD:19892","UMLS:C4749374"],"termid":"MONDO:0015315","xrefs":{"Monarch":{"xref_id":"0015315"}}}


id: GO:0016672
data:
  {"annotated_genes":["SJAG_02599"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070224"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces quinone or a related compound.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.8.5.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulphur group of donors, quinone or similar compound as acceptor","type":"exact"}],"termid":"GO:0016672","terms_by_termid":{"GO:0070224":null}}


id: PATO:0001450
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality which is held by a bearer when the latter exhibits an excessive accumulation of extracellular fluid.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edematous","synonyms":[{"name":"edema","type":"narrow"},{"name":"edemic","type":"exact"},{"name":"oedema","type":"narrow"},{"name":"oedematous","type":"exact"},{"name":"oedemic","type":"exact"}],"termid":"PATO:0001450"}


id: GO:0099511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Regulation of cytosolic calcium ion concentrations via the directed movement of calcium ions across the plasma-membrane into the cytosol via the action of a voltage-gated calcium ion channel.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in regulation of cytosolic calcium levels","termid":"GO:0099511"}


id: GO:0032949
data:
  {"annotated_genes":["SJAG_02278","SJAG_00424","SJAG_00610","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95277,89781,103161,92768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways relusting in the formation of alpha-glucans.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucan biosynthetic process","termid":"GO:0010962"},{"relation_name":"is_a","term_name":"regulation of alpha-glucan metabolic process","termid":"GO:0032948"},{"relation_name":"regulates","term_name":"alpha-glucan biosynthetic process","termid":"GO:0030979"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of alpha-glucan anabolism","type":"exact"},{"name":"regulation of alpha-glucan biosynthesis","type":"exact"},{"name":"regulation of alpha-glucan formation","type":"exact"},{"name":"regulation of alpha-glucan synthesis","type":"exact"}],"termid":"GO:0032949","terms_by_termid":{"GO:0070610":null}}


id: MONDO:0016258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon malignant neoplasm arising from the uterine corpus. It is characterized by the presence of a malignant epithelial component and a benign mesenchymal (usually fibrous) component.","definition_xrefs":["NCIT:C40182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine body mixed cancer","termid":"MONDO:0002879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus carcinofibroma","secondary_identifiers":["Orphanet:213605","GARD:20474","ICDO:8934/3","UMLS:C1883485","MEDGEN:364874"],"synonyms":[{"name":"Carcinofibroma of the corpus uteri","type":"related"},{"name":"uterine corpus Carcinofibroma","type":"exact"}],"termid":"MONDO:0016258","xrefs":{"Monarch":{"xref_id":"0016258"}}}


id: PBO:0081802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 731, pseudogene","termid":"PBO:0081802"}


id: PBO:0079230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 7A","termid":"PBO:0079230"}


id: SO:0002062
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contiguous cluster of translocations, usually the result of a single catastrophic event such as chromothripsis or chromoanasynthesis.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex_structural_alteration","termid":"SO:0001784"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_chromosomal_rearrangement","synonyms":[{"name":"complex chromosomal rearrangement","type":"exact"}],"termid":"SO:0002062"}


id: FYPO:0000554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which pseudohyphal growth is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell growth","termid":"FYPO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal pseudohyphal growth","secondary_identifiers":["FYPO:0000439"],"synonyms":[{"name":"filamentous growth: normal","type":"broad"},{"name":"normal filamentous growth","type":"broad"},{"name":"pseudohyphal growth: normal","type":"related"}],"termid":"FYPO:0000554"}


id: GO:0061136
data:
  {"annotated_genes":["SJAG_02244","SJAG_00766","SJAG_01210","SJAG_00712","SJAG_02723","SJAG_00071","SJAG_01489","SJAG_01528","SJAG_03699","SJAG_00052","SJAG_01131","SJAG_04477","SJAG_00642","SJAG_00475","SJAG_03048","SJAG_02485","SJAG_01544"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[78420,77769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[77665,107266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[89287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[67264,65879,61571,69070,67652,68534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[102697,112022,117373,109204,106973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[114934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032434"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds that is mediated by the proteasome.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"is_a","term_name":"regulation of proteolysis involved in protein catabolic process","termid":"GO:1903050"},{"relation_name":"regulates","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00071":null,"SJAG_00475":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01489":null,"SJAG_01528":null,"SJAG_01544":null,"SJAG_02244":null,"SJAG_02485":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of proteasomal protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0061136","terms_by_termid":{"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:1901800":null,"GO:1904293":null,"GO:1905785":null,"GO:1905786":null}}


id: PBO:0051296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-27 (pseudogene)","termid":"PBO:0051296"}


id: PBO:0090694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase inhibitor Inh1","termid":"PBO:0090694"}


id: PBO:0048133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin pseudogene 1","termid":"PBO:0048133"}


id: GO:0000177
data:
  {"annotated_genes":["SJAG_04084","SJAG_04818","SJAG_04006","SJAG_04824","SJAG_03179","SJAG_04153","SJAG_00854","SJAG_01818","SJAG_04321","SJAG_01521"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71608,72069,72862,73583,74719,74944,75428,76674,78046,116178],"is_not":false,"summary":null,"term":"GO:0000177"}]},"cv_name":"cellular_component","definition":"A ribonuclease complex that has 3-prime to 5-prime processive hydrolytic exoribonuclease activity producing 5-prime-phosphomonoesters. Participates in a multitude of cellular RNA processing and degradation events preventing nuclear export and/or translation of aberrant RNAs. Restricted to processing linear and circular single-stranded RNAs (ssRNA) only. RNAs with complex secondary structures may have to be unwound or pre-processed by co-factors prior to entering the complex, esp if the 3-prime end is structured.","definition_xrefs":["PMID:20531386","PMID:17174896","PMID:26726035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exosome (RNase complex)","termid":"GO:0000178"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cytoplasmic exosome (RNase complex)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic exosome (ribonuclease complex)","type":"exact"},{"name":"cytoplasmic exosome multienzyme ribonuclease complex","type":"exact"},{"name":"prokaryotic exosome multienzyme ribonuclease complex","type":"exact"}],"termid":"GO:0000177","terms_by_termid":{"GO:0000177":null}}


id: MONDO:0001680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign papilloma that arises from the vagina in infants and young women.","definition_xrefs":["NCIT:C40255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign vaginal neoplasm","termid":"MONDO:0000647"},{"relation_name":"is_a","term_name":"vaginal glandular neoplasm","termid":"MONDO:0001704"},{"relation_name":"is_a","term_name":"glandular papilloma","termid":"MONDO:0021078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal mullerian papilloma","secondary_identifiers":["DOID:133","UMLS:C1519926","MEDGEN:276952"],"synonyms":[{"name":"vaginal Muellerian papilloma","type":"exact"},{"name":"vaginal Mullerian papilloma","type":"exact"},{"name":"vaginal Müllerian papilloma","type":"exact"}],"termid":"MONDO:0001680","xrefs":{"Monarch":{"xref_id":"0001680"}}}


id: PBO:0039502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain containing 26","termid":"PBO:0039502"}


id: MONDO:0009963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulbright-Hodes syndrome is characterized by renal dysplasia, growth retardation, phocomelia or mesomelia, radiohumeral fusion, rib abnormalities, anomalies of the external genitalia and a potter-like facies. The syndrome has been described in three infants (one pair of sibs and an unrelated case), all of whom died shortly after birth from respiratory distress resulting from pulmonary hypoplasia and oligohydramnios caused by renal dysplasia. The mode of transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:3404"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ulbright-Hodes syndrome","secondary_identifiers":["MESH:C537754","MEDGEN:376585","GARD:5394","OMIM:266910","SCTID:719840003","UMLS:C1849438"],"synonyms":[{"name":"RL syndrome","type":"related"},{"name":"Ulbright Hodes syndrome","type":"related"},{"name":"renal dysplasia limb defects syndrome","type":"related"},{"name":"renal dysplasia, mesomelia, and radiohumeral fusion","type":"related"},{"name":"renal dysplasia-limb defects syndrome","type":"exact"},{"name":"renal dysplasia-mesomelia-radiohumeral fusion syndrome","type":"exact"}],"termid":"MONDO:0009963","xrefs":{"Monarch":{"xref_id":"0009963"}}}


id: GO:0098944
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a postsynaptic recycling endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic endosome membrane","termid":"GO:0098895"},{"relation_name":"part_of","term_name":"postsynaptic recycling endosome","termid":"GO:0098837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"postsynaptic recycling endosome membrane","termid":"GO:0098944"}


id: FYPO:0000343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of hydrogen sulfide released into the growth medium by cells is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of substance in growth medium","termid":"FYPO:0000800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"increased concentration of hydrogen sulfide in growth medium","synonyms":[{"name":"increased concentration of H2S in growth medium","type":"exact"},{"name":"increased hydrogen sulfide biosynthesis","type":"related"}],"termid":"FYPO:0000343"}


id: GO:0044339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in osteoblast differentiation.","definition_xrefs":["GOC:jl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in osteoblast differentiation (obsolete GO:0044339)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"}],"termid":"GO:0044339"}


id: PBO:0040818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICRA like chromatin remodeling complex associated protein","termid":"PBO:0040818"}


id: PBO:0068691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 72, pseudogene","termid":"PBO:0068691"}


id: GO:0032202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a telomere at a non-telomeric double-stranded DNA end. A telomere is a terminal region of a linear chromosome that includes telomeric DNA repeats and associated proteins.","definition_xrefs":["GOC:ns","PMID:11902675","PMID:8622671","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"telomere organization","termid":"GO:0032200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"telomere assembly","synonyms":[{"name":"telomere formation","type":"exact"}],"termid":"GO:0032202"}


id: MOD:00192
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and a glycine residue to form L-serine 5-imidazolinone glycine.","definition_xrefs":["PubMed:9631087","PubMed:1347277","ChEBI:21393","RESID:AA0184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine 5-imidazolinone glycine","synonyms":[{"name":"(2-[(1R)-1-amino-2-hydroxyethyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2-[1-amino-2-hydroxyethyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"CROSSLNK 5-imidazolinone (Ser-Gly)","type":"exact"},{"name":"L-serine 5-imidazolinone glycine","type":"exact"},{"name":"green fluorescent protein chromophore","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"},{"name":"seryl-5-imidazolinone glycine","type":"exact"}],"termid":"MOD:00192"}


id: GO:0051194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a cofactor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cofactor metabolic process (obsolete GO:0051194)","synonyms":[{"name":"activation of cofactor metabolic process","type":"narrow"},{"name":"positive regulation of cofactor metabolism","type":"exact"},{"name":"stimulation of cofactor metabolic process","type":"narrow"},{"name":"up regulation of cofactor metabolic process","type":"exact"},{"name":"up-regulation of cofactor metabolic process","type":"exact"},{"name":"upregulation of cofactor metabolic process","type":"exact"}],"termid":"GO:0051194"}


id: PBO:0055442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2873","termid":"PBO:0055442"}


id: MONDO:1012154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaesophagus that occurs in domestic ferret.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaesophagus, non-human animal","termid":"MONDO:1011660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, domestic ferret","secondary_identifiers":["OMIA:000631-9669"],"termid":"MONDO:1012154","xrefs":{"Monarch":{"xref_id":"1012154"}}}


id: PBO:0000864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic aminotransferase (predicted)","termid":"PBO:0000864"}


id: PBO:0072175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 2","termid":"PBO:0072175"}


id: FYPO:0008076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of phosphatidylinositol-4,5-bisphosphate by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:25959226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid binding","termid":"FYPO:0005307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased phosphatidylinositol-4,5-bisphosphate binding","synonyms":[{"name":"decreased PI(4,5)P2 binding","type":"exact"},{"name":"decreased PIP2 binding","type":"exact"},{"name":"decreases PtdInsP binding","type":"exact"}],"termid":"FYPO:0008076"}


id: PBO:0066068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor beta","termid":"PBO:0066068"}


id: PBO:0039104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 8","termid":"PBO:0039104"}


id: PBO:0061922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily F member 2 pseudogene","termid":"PBO:0061922"}


id: GO:0047741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzyl cetraxate + H2O = benzyl alcohol + cetraxate + H+.","definition_xrefs":["EC:3.1.1.70","RHEA:23460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"cetraxate benzylesterase activity","secondary_identifiers":["MetaCyc:CETRAXATE-BENZYLESTERASE-RXN","KEGG_REACTION:R03612"],"synonyms":[{"name":"cetraxate-benzyl-ester benzylhydrolase activity","type":"related"}],"termid":"GO:0047741"}


id: GO:0003326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a pancreatic A cell and its capacity to differentiate into a pancreatic A cell. A pancreatic A cell is a cell in the pancreas that secretes glucagon.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"pancreatic A cell differentiation","termid":"GO:0003310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic A cell fate commitment","termid":"GO:0003326"}


id: GO:1901787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzoyl-CoA.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0055086"],"is_obsolete":false,"name":"benzoyl-CoA metabolic process","synonyms":[{"name":"benzoyl-CoA metabolism","type":"exact"}],"termid":"GO:1901787"}


id: PBO:0004673
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperornithinemia","termid":"PBO:0004673"}


id: GO:0050005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA = 3-(4-methylpent-3-en-1-yl)pent-2-enedioyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.57","RHEA:24144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isohexenylglutaconyl-CoA hydratase activity","secondary_identifiers":["MetaCyc:ISOHEXENYLGLUTACONYL-COA-HYDRATASE-RXN","UM-BBD_reactionID:r1167","KEGG_REACTION:R03493"],"synonyms":[{"name":"3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA hydro-lyase [3-(4-methylpent-3-en-1-yl)pent-2-enedioyl-CoA-forming]","type":"related"},{"name":"3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA hydro-lyase activity","type":"related"},{"name":"3-hydroxy-3-isohexenylglutaryl-CoA-hydrolase activity","type":"related"},{"name":"beta-isohexenylglutaconyl-CoA-hydratase activity","type":"related"},{"name":"isohexenylglutaconyl coenzyme A hydratase activity","type":"related"}],"termid":"GO:0050005"}


id: GO:0030176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the endoplasmic reticulum membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of endoplasmic reticulum membrane (obsolete GO:0030176)","synonyms":[{"name":"ER integral membrane protein","type":"exact"},{"name":"integral to ER membrane","type":"exact"},{"name":"integral to endoplasmic reticulum membrane","type":"narrow"}],"termid":"GO:0030176"}


id: MOD:00771
data:
  {"annotated_genes":["SJAG_02592","SJAG_02763","SJAG_03012"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[119407,119405,119516,119406,119515,80975,80974,119404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 166.98-167.00 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.01 Da","termid":"MOD:00770"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_03012":null},"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 166.98-167.00 Da","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"termid":"MOD:00771","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: PATO:0000166
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000166 absolute time (obsolete PATO:0000166)","termid":"PATO:0000166"}


id: GO:0018028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The myristoylation of peptidyl-lysine to form peptidyl-N6-myristoyl-L-lysine.","definition_xrefs":["RESID:AA0078"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine myristoylation (obsolete GO:0018028)","synonyms":[{"name":"peptidyl-lysine myristylation","type":"exact"}],"termid":"GO:0018028"}


id: MONDO:0015755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myopathy with hexagonally cross-linked tubular arrays is a rare, congenital, non-dystrophic, mild, slowly progressive, proximal myopathy characterized by exercise intolerance and post-exercise myalgia without rhabdomyolysis, associated with highly organized hexagonally cross-linked tubular arrays in skeletal muscle biopsy. Additional features may include muscle atrophy (or diffuse hypotrophy), myalgia with or without musclar weakness, paresis of truncal and limb-girdle musculature, minimal ptosis, lumbar hyperlordosis, decreased deep tendon reflexes, contractures and pes equinovarus.","definition_xrefs":["Orphanet:171889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy with hexagonally cross-linked tubular arrays","secondary_identifiers":["icd11.foundation:1953170361","MEDGEN:1636081","UMLS:C4707259","GARD:20129","SCTID:764994007"],"termid":"MONDO:0015755","xrefs":{"Monarch":{"xref_id":"0015755"}}}


id: MONDO:0018665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked acrogigantism due to a point mutation (obsolete MONDO:0018665)","secondary_identifiers":["Orphanet:448348"],"synonyms":[{"name":"X-LAG (X-linked acrogigantism) due to a point mutation","type":"exact"},{"name":"familial infantile gigantism due to a point mutation","type":"exact"}],"termid":"MONDO:0018665","xrefs":{"Monarch":{"xref_id":"0018665"}}}


id: PBO:0005169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase activator Mob2","termid":"PBO:0005169"}


id: FYPO:0001033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA repair","termid":"FYPO:0006569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"normal double-strand break repair","synonyms":[{"name":"normal double-strand break repair during mitotic cell cycle","type":"related"},{"name":"normal double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0001033"}


id: MONDO:0013787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psychomotor retardation, epilepsy, and craniofacial dysmorphism","secondary_identifiers":["MEDGEN:482685","OMIM:614501","UMLS:C3281055"],"synonyms":[{"name":"PMRED","type":"related"},{"name":"neurodevelopmental disorder with hypotonia, craniofacial abnormalities, and seizures","type":"exact"},{"name":"psychomotor retardation, epilepsy, and craniofacial dysmorphism","type":"exact"}],"termid":"MONDO:0013787","xrefs":{"Monarch":{"xref_id":"0013787"}}}


id: PBO:0075405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 3","termid":"PBO:0075405"}


id: MONDO:0018489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune encephalopathy with parasomnia and obstructive sleep apnea is a rare neurologic disorder characterized by a unique non-REM and REM parasomnia with sleep breathing dysfunction, gait instability and repetitive episodes of respiratory insufficiency, as well as autoantibodies against IgLON5. Patients may present stridor, chorea, limb ataxia, abnormal ocular movements, and bulbar symptoms (i.e. dysphagia, dysarthria, episodic central hypoventilation) with normal brain MRI. Excessive day sleepiness and cognitive deterioration have also been reported.","definition_xrefs":["Orphanet:420789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune encephalopathy with parasomnia and obstructive sleep apnea","secondary_identifiers":["GARD:21749","UMLS:C4707562","SCTID:765751002","MEDGEN:1644256"],"synonyms":[{"name":"anti-IgLON5 disease","type":"exact"},{"name":"anti-IgLON5 syndrome","type":"exact"}],"termid":"MONDO:0018489","xrefs":{"Monarch":{"xref_id":"0018489"}}}


id: GO:0031161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"},{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylinositol catabolic process","synonyms":[{"name":"PtdIns catabolic process","type":"exact"},{"name":"PtdIns catabolism","type":"exact"},{"name":"phosphatidylinositol breakdown","type":"exact"},{"name":"phosphatidylinositol catabolism","type":"exact"},{"name":"phosphatidylinositol degradation","type":"exact"}],"termid":"GO:0031161"}


id: GO:0072380
data:
  {"annotated_genes":["SJAG_01496","SJAG_03865"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79871,115396],"is_not":false,"summary":null,"term":"GO:0072380"}]},"cv_name":"cellular_component","definition":"A protein complex found in yeast that contains GET4, MDY2 (GET5), SGT2, and at least two heat shock proteins, HSP104 and YBR137W. The TRC complex transfers tail-anchored (TA) proteins to GET3 for targeting to the endoplasmic reticulum membrane.","definition_xrefs":["PMID:23142665","GOC:mah","PMID:20850366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER membrane insertion complex","termid":"GO:0072379"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01496":null,"SJAG_03865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"TRC complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"GET4-GET5 transmembrane domain recognition complex","type":"related"},{"name":"TMD recognition complex","type":"exact"}],"termid":"GO:0072380","terms_by_termid":{"GO:0072380":null}}


id: PR:O94415
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04968","PANTHER:PTHR11815:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.08","secondary_identifiers":["UniProtKB:O94415"],"synonyms":[{"name":"SCS-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SUCLA2","type":"exact"},{"name":"succinyl-CoA synthetase beta chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94415"}


id: PR:Q9HDV9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycine cleavage system H protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03446","PANTHER:PTHR11715:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage system H protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.01","secondary_identifiers":["UniProtKB:Q9HDV9"],"synonyms":[{"name":"Spom972h-GCSH","type":"exact"},{"name":"glycine decarboxylase complex subunit H (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDV9"}


id: PBO:0049023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein nmb","termid":"PBO:0049023"}


id: PBO:0085346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B (lysophospholipase) involved in lipid metabolism; hydrolyzes phosphatidylinositol and phosphatidylserine and displays transacylase activity in vitro; PLB3 has a paralog, PLB1, that arose from the whole genome duplication","termid":"PBO:0085346"}


id: MONDO:1012762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any polyneuropathy that occurs in dogs due to a mutation in the RAB3GAP1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"polyneuropathy, dog","termid":"MONDO:1012354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy, RAB3GAP1-related, dog","secondary_identifiers":["OMIA:001970-9615"],"synonyms":[{"name":"NVSD","type":"exact"},{"name":"POANV","type":"exact"},{"name":"neuronal vacuolation and spinocerebellar degeneration, dog","type":"related"},{"name":"polyneuropathy, ocular abnormalities and neuronal vacuolation, dog","type":"related"}],"termid":"MONDO:1012762","xrefs":{"Monarch":{"xref_id":"1012762"}}}


id: PBO:0028760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_nitric_oxide_level","termid":"PBO:0028760"}


id: PBO:0012549
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens Rab6","termid":"PBO:0012549"}


id: GO:0033294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ectoine, 1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ectoine binding","termid":"GO:0033294"}


id: GO:0010933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of B cell tolerance induction.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of macrophage tolerance induction","termid":"GO:0010932"},{"relation_name":"positively_regulates","term_name":"macrophage tolerance induction","termid":"GO:0010931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage tolerance induction","termid":"GO:0010933"}


id: MONDO:0025369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An arbovirus infection of sheep and goats transmitted by ticks. It is characterized by high fever and hemorrhagic gastroenteritis.","definition_xrefs":["MESH:D009265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"tick-borne infectious disease, non-human animal","termid":"MONDO:0700201"},{"relation_name":"is_a","term_name":"Bunyaviridae infectious disease, non-human animal","termid":"MONDO:0700202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nairobi sheep disease","secondary_identifiers":["SCTID:24069003"],"synonyms":[{"name":"disease, Nairobi sheep","type":"related"},{"name":"sheep disease, Nairobi","type":"related"}],"termid":"MONDO:0025369","xrefs":{"Monarch":{"xref_id":"0025369"}}}


id: PBO:0071996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 25","termid":"PBO:0071996"}


id: MONDO:0009454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any immunodeficiency-centromeric instability-facial anomalies syndrome in which the cause of the disease is a mutation in the DNMT3B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency-centromeric instability-facial anomalies syndrome","termid":"MONDO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0006025"],"is_obsolete":false,"name":"immunodeficiency-centromeric instability-facial anomalies syndrome 1","secondary_identifiers":["MEDGEN:1636193","NCIT:C156430","OMIM:242860","UMLS:C4551557","DOID:0090008","GARD:15188"],"synonyms":[{"name":"DNMT3B immunodeficiency-centromeric instability-facial anomalies syndrome","type":"exact"},{"name":"ICF syndrome 1","type":"exact"},{"name":"ICF1","type":"related"},{"name":"centromeric instability, immunodeficiency syndrome","type":"related"},{"name":"immune deficiency, variable, with centromeric instability of chromosomes 1, 9, and 16","type":"related"},{"name":"immunodeficiency syndrome, variable","type":"related"},{"name":"immunodeficiency-centromeric instability-Facial anomalies syndrome type 1","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome 1","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome caused by mutation in DNMT3B","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome type 1","type":"exact"}],"termid":"MONDO:0009454","xrefs":{"Monarch":{"xref_id":"0009454"}}}


id: MONDO:0018825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PYCR2-related microcephaly-progressive leukoencephalopathy is a rare, genetic, syndromic intellectual disability disorder characterized by progressive postnatal microcephaly, cerebral hypomyelination and severe psychomotor developmental delayed with absent speech, as well as axial hypotonia, appendicular hypertonia with hyperextensibility of the wrists and ankles, hyperreflexia, severe muscle wasting and failure to thrive. Associated craniofacial dysmorphism includes triangular facies with bitemporal narrowing, down- or upslanting palpebral fissures, malar hypoplasia, large malformed ears with overfolded helices, upturned bulbous nose, long smooth philtrum and thin vermilion borders.","definition_xrefs":["Orphanet:481152"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYCR2-related microcephaly-progressive leukoencephalopathy","secondary_identifiers":["GARD:17873"],"termid":"MONDO:0018825","xrefs":{"Monarch":{"xref_id":"0018825"}}}


id: MONDO:1012243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal dystrophy, non-human animal","termid":"MONDO:1011980"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dystrophy, domestic cat","secondary_identifiers":["OMIA:000869-9685"],"termid":"MONDO:1012243","xrefs":{"Monarch":{"xref_id":"1012243"}}}


id: PBO:0059819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 45","termid":"PBO:0059819"}


id: PBO:0051639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP3 pseudogene 2","termid":"PBO:0051639"}


id: GO:0001843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline.","definition_xrefs":["ISBN:0878932437","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube closure","termid":"GO:0060606"},{"relation_name":"part_of","term_name":"primary neural tube formation","termid":"GO:0014020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural tube closure","termid":"GO:0001843"}


id: PBO:0035930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K4_methylation_during_vegetative_growth","termid":"PBO:0035930"}


id: GO:0017006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linking of a tetrapyrrole to a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-tetrapyrrole linkage","termid":"GO:0017006"}


id: PBO:0005061
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.12","termid":"PBO:0005061"}


id: MONDO:0022576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilirubin induced brain injury in the newborn","termid":"MONDO:0022576","xrefs":{"Monarch":{"xref_id":"0022576"}}}


id: PBO:0075026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-37","termid":"PBO:0075026"}


id: PBO:0057849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3160-2","termid":"PBO:0057849"}


id: MONDO:0016896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial deletion of the short arm of chromosome 18 (obsolete MONDO:0016896)","termid":"MONDO:0016896","xrefs":{"Monarch":{"xref_id":"0016896"}}}


id: PBO:0080859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 interacting factor homolog B, membrane trafficking protein","termid":"PBO:0080859"}


id: SO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant in the genetic material inherited from the father.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal_variant","synonyms":[{"name":"paternal variant","type":"exact"}],"termid":"SO:0001776"}


id: PBO:0071539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 4","termid":"PBO:0071539"}


id: PBO:0042179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B1","termid":"PBO:0042179"}


id: PBO:0085305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase and transcription/RNA-processing factor; associates with TFIIB and cleavage/polyadenylation factor Pta1p; exhibits phosphatase activity on serine-5 and serine-7 of the RNA polymerase II C-terminal domain; affects start site selection and transcriptional read through in vivo","termid":"PBO:0085305"}


id: PBO:0074074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 48","termid":"PBO:0074074"}


id: PBO:0067836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 138","termid":"PBO:0067836"}


id: PBO:0062849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine transcarbamylase","termid":"PBO:0062849"}


id: FYPO:0008232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more microtubule bundles than normal during mitotic M-phase.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundles present in increased numbers","termid":"FYPO:0002401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0000002","FYPO:0002399","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"microtubule bundles present in increased numbers during mitotic M phase","termid":"FYPO:0008232"}


id: PBO:0001189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARID domain","termid":"PBO:0001189"}


id: GO:0061468
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bound intermediate cleavage-stage structure of individual or groups of chromosomes that coalesces and fuses with other karyomeres to form a nucleus during interphase. Karyomere formation occurs in blastomeres undergoing rapid cell division.","definition_xrefs":["PMID:22863006","GOC:dph","PMID:12734396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"karyomere","termid":"GO:0061468"}


id: PBO:0056362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 6","termid":"PBO:0056362"}


id: PBO:0049743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit gamma 1","termid":"PBO:0049743"}


id: PBO:0075613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted phosphoprotein 1","termid":"PBO:0075613"}


id: MONDO:0017870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary valve stenosis","termid":"MONDO:0017865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supravalvular pulmonary stenosis","secondary_identifiers":["GARD:4594","Orphanet:3192","NANDO:2200278","UMLS:C3280212","MEDGEN:481842"],"synonyms":[{"name":"pulmonary supravalvular stenosis","type":"related"}],"termid":"MONDO:0017870","xrefs":{"Monarch":{"xref_id":"0017870"}}}


id: PBO:0042385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300a molecule","termid":"PBO:0042385"}


id: MONDO:1010066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, non-human animal","secondary_identifiers":["OMIA:000645"],"termid":"MONDO:1010066","xrefs":{"Monarch":{"xref_id":"1010066"}}}


id: MONDO:0042485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The inflammation of one or more joints caused by any infectious pathogen within the joint space. Symptoms include pain, stiffness, and decreased range of motion in the affected joint.","definition_xrefs":["NCIT:C26700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"},{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infective arthritis","secondary_identifiers":["MEDGEN:13918","UMLS:C0003869"],"synonyms":[{"name":"infective arthritis","type":"exact"},{"name":"septic arthritis","type":"related"}],"termid":"MONDO:0042485","xrefs":{"Monarch":{"xref_id":"0042485"}}}


id: PBO:0061616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 2","termid":"PBO:0061616"}


id: PBO:0046401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythrocyte membrane protein band 4.1 like 4B","termid":"PBO:0046401"}


id: GO:0032157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A contractile ring, i.e. a cytoskeletal structure composed of actin filaments and myosin, that forms beneath the plasma membrane of the prospore envelope in meiotic cells in preparation for completing cytokinesis.","definition_xrefs":["PMID:16009555","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic actomyosin contractile ring","termid":"GO:0110086"},{"relation_name":"part_of","term_name":"ascospore-type prospore","termid":"GO:0042764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0070938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0015629","GO:0005938","GO:0070938"],"is_obsolete":false,"name":"prospore contractile ring","synonyms":[{"name":"actomyosin ring","type":"related"},{"name":"cytokinetic ring","type":"related"},{"name":"meiotic contractile ring","type":"related"}],"termid":"GO:0032157"}


id: GO:0061011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the hepatic duct over time, from its formation to the mature structure. The hepatic duct is the duct that leads from the liver to the common bile duct.","definition_xrefs":["GOC:dph","PMID:20614624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common bile duct development","termid":"GO:0061009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatic duct development","termid":"GO:0061011"}


id: MONDO:0800441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heart disease that includes congenital heart defects, abnormal cardiac conduction or myopathy. Congenital heart defects consists of any heart disease that is present at birth. Representative examples include atrial septal defect, ventricular septal defect, tetralogy of Fallot, and hypoplastic left heart syndrome.","definition_xrefs":["PMID:21110066","PMID:21165553","PMID:20456451","PMID:11714651","PMID:10587520","PMID:20659440","PMID:28991257","PMID:34214246","PMID:14607454","PMID:16896344","PMID:19948535","PMID:15810002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart conduction disease","termid":"MONDO:0000992"},{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"NKX2.5-related congenital, conduction and myopathic heart disease","synonyms":[{"name":"NKX2-5-related congenital, conduction and myopathic heart disease","type":"exact"}],"termid":"MONDO:0800441","xrefs":{"Monarch":{"xref_id":"0800441"}}}


id: GO:1990765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry of the large intestine, exclusive of the rectum. The colon is that part of the large intestine that connects the small intestine to the rectum.","definition_xrefs":["PMID:24170253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"},{"relation_name":"part_of","term_name":"intestine smooth muscle contraction","termid":"GO:0014827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"colon smooth muscle contraction","termid":"GO:1990765"}


id: PBO:0069883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1171, pseudogene","termid":"PBO:0069883"}


id: PBO:0056852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489","termid":"PBO:0056852"}


id: FYPO:0000936
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cortical microtubule cytoskeleton is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000932"},{"relation_name":"is_a","term_name":"abnormal protein localization to cortical microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000935"},{"relation_name":"is_a","term_name":"increased protein localization to cell cortex during vegetative growth","termid":"FYPO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to cortical microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"increased protein localisation to cortical microtubule cytoskeleton during vegetative growth","type":"exact"},{"name":"increased protein localization to cortical microtubule cytoskeleton during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000936"}


id: PBO:0085413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane sterol transporter of the ATP-binding cassette family; required, along with Pdr11p, for uptake of exogenous sterols and their incorporation into the plasma membrane; activity is stimulated by phosphatidylserine; sterol uptake is required for anaerobic growth because sterol biosynthesis requires oxygen; AUS1 has a paralog, PDR11, that arose from the whole genome duplication","termid":"PBO:0085413"}


id: PBO:0024802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_part_structure_that_is_capable_of","termid":"PBO:0024802"}


id: FYPO:0001634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of tryptophan measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular tryptophan level","termid":"FYPO:0001643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuolar tryptophan level","synonyms":[{"name":"normal level of tryptophan in vacuole","type":"exact"},{"name":"normal vacuolar tryptophan level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar tryptophan level during vegetative growth","type":"exact"}],"termid":"FYPO:0001634"}


id: PBO:0061646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT19 pseudogene 4","termid":"PBO:0061646"}


id: PBO:0034536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_subtelomere-derived_RNA_level","termid":"PBO:0034536"}


id: PBO:0086248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that mediates sphingolipid homeostasis; evolutionarily conserved, required for resistance to agents that induce unfolded protein response; Orm1p and Orm2p together control membrane biogenesis by coordinating lipid homeostasis with protein quality control; ORM1 has a paralog, ORM2, that arose from the whole genome duplication","termid":"PBO:0086248"}


id: PR:O42928
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C6.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.04","synonyms":[{"name":"Spom972h-dbl6","type":"exact"}],"termid":"PR:O42928"}


id: FYPO:0003504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in the plasma membrane is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"},{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"},{"relation_name":"is_a","term_name":"altered level of substance in plasma membrane","termid":"FYPO:0008331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level in plasma membrane","synonyms":[{"name":"increased plasma membrane protein level during vegetative growth","type":"exact"},{"name":"increased protein level in cell membrane during vegetative growth","type":"exact"},{"name":"increased protein level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"increased protein level in plasma membrane during vegetative growth","type":"exact"},{"name":"protein accumulation in plasma membrane","type":"exact"}],"termid":"FYPO:0003504"}


id: PR:O74541
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC777.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C777.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.02","synonyms":[{"name":"Spom972h-SPCC777.02","type":"exact"}],"termid":"PR:O74541"}


id: PBO:0063801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHKA1 antisense RNA 1","termid":"PBO:0063801"}


id: PBO:0002148
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focus formation at heterochromatic regions, Swi5_dependent","termid":"PBO:0002148"}


id: MONDO:0004904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"degeneration of macula and posterior pole","termid":"MONDO:0002175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"toxic maculopathy","secondary_identifiers":["DOID:9867","ICD9:362.55","MEDGEN:543164","SCTID:44115007","icd11.foundation:1889317154","UMLS:C0271086"],"synonyms":[{"name":"toxic maculopathy of retina","type":"exact"}],"termid":"MONDO:0004904","xrefs":{"Monarch":{"xref_id":"0004904"}}}


id: GO:0097677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the signal transducers and activators of transcription (STAT) protein family. STATs are, as the name indicates, both signal transducers and transcription factors. STATs are activated by cytokines and some growth factors and thus control important biological processes including cell growth, cell differentiation, apoptosis and immune responses.","definition_xrefs":["GOC:mr","InterPro:IPR001217","PMID:21447371","PMID:24470978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"STAT family protein binding","synonyms":[{"name":"signal transducers and activators of transcription family protein binding","type":"exact"}],"termid":"GO:0097677"}


id: MONDO:0003114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bone giant cell sarcoma (obsolete MONDO:0003114)","termid":"MONDO:0003114","xrefs":{"Monarch":{"xref_id":"0003114"}}}


id: MONDO:1012104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hodgkin disease, non-human animal","termid":"MONDO:1011808"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hodgkin disease, dog","secondary_identifiers":["OMIA:000476-9615"],"termid":"MONDO:1012104","xrefs":{"Monarch":{"xref_id":"1012104"}}}


id: GO:2000916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucuronoxylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucuronoxylan catabolic process","termid":"GO:2000915"},{"relation_name":"is_a","term_name":"negative regulation of xylan catabolic process","termid":"GO:2001001"},{"relation_name":"negatively_regulates","term_name":"glucuronoxylan catabolic process","termid":"GO:2000886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of glucuronoxylan catabolic process","synonyms":[{"name":"negative regulation of glucuronoxylan catabolism","type":"exact"}],"termid":"GO:2000916"}


id: MONDO:0008405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete scapula, contour of vertebral border of (obsolete MONDO:0008405)","secondary_identifiers":["OMIM:181300"],"synonyms":[{"name":"scapula, contour of vertebral border of","type":"exact"}],"termid":"MONDO:0008405","xrefs":{"Monarch":{"xref_id":"0008405"}}}


id: GO:0061735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of the macromitophagy pathway that is triggered by mitochondrial depolarization and requires the function of a DNM1L-family molecule.","definition_xrefs":["PMID:25349190"],"gene_count":0,"genotype_count":0,"name":"obsolete DNM1L-mediated stimulation of mitophagy in response to mitochondrial depolarization (obsolete GO:0061735)","synonyms":[{"name":"dynamin-like protein-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"}],"termid":"GO:0061735"}


id: PBO:0079223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 3","termid":"PBO:0079223"}


id: PBO:0062258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 14","termid":"PBO:0062258"}


id: GO:0034708
data:
  {"annotated_genes":["SJAG_00341","SJAG_03431","SJAG_00756","SJAG_07011","SJAG_02386","SJAG_01325","SJAG_04680","SJAG_02637","SJAG_04181","SJAG_04574","SJAG_02119","SJAG_00896","SJAG_04848","SJAG_02329","SJAG_04890","SJAG_02768","SJAG_03949","SJAG_03680","SJAG_02170","SJAG_01540","SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94683,119108,110788,117991,114286,97051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[79192,96548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035657"},{"annotations":[109651,78856,75903,71570,116006,74314,72178,91049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048188"},{"annotations":[74400,75266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031515"},{"annotations":[104450,75781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043528"},{"annotations":[116015,119288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106143"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses methyltransferase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_00756":null,"SJAG_00769":null,"SJAG_00896":null,"SJAG_01325":null,"SJAG_01540":null,"SJAG_02119":null,"SJAG_02170":null,"SJAG_02329":null,"SJAG_02386":null,"SJAG_02637":null,"SJAG_02768":null,"SJAG_03431":null,"SJAG_03680":null,"SJAG_03949":null,"SJAG_04181":null,"SJAG_04574":null,"SJAG_04680":null,"SJAG_04848":null,"SJAG_04890":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"methyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034708","terms_by_termid":{"GO:0031515":null,"GO:0035657":null,"GO:0043494":null,"GO:0043528":null,"GO:0048188":null,"GO:0106143":null}}


id: PBO:0067285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 368, pseudogene","termid":"PBO:0067285"}


id: GO:0046981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of N-acetylglucosamine (GlcNAc) in a beta-1,3 linkage to the mannose(beta-1,4)Glc disaccharide core of glycolipids.","definition_xrefs":["PMID:12130651","GOC:bf","PMID:12130631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"beta-1,4-mannosylglycolipid beta-1,3-N-acetylglucosaminyltransferase activity","synonyms":[{"name":"UDP-N-acetylglucosamine:beta-D-mannosyl-glycolipid beta-1,3-N-acetylglucosaminyltransferase activity","type":"exact"}],"termid":"GO:0046981"}


id: PBO:0083108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase I found in nucleus and mitochondria; essential enzyme that joins Okazaki fragments during DNA replication; also acts in ribonucleotide excision repair, base excision repair, and recombination; DNA ligase I mutants trigger ubiquitination of PCNA at K107, facilitating Rad59p-mediated bypass of unligated Okazaki fragments; human homolog LIG1 can complement yeast cdc9 temperature-sensitive mutant at restrictive temperature","termid":"PBO:0083108"}


id: PBO:0067951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 253","termid":"PBO:0067951"}


id: PBO:0059212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRM3 pseudogene 1","termid":"PBO:0059212"}


id: PBO:0070644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 15","termid":"PBO:0070644"}


id: PBO:0090638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antibiotic biosynthesis monooxygenase-like domain","termid":"PBO:0090638"}


id: PBO:0079914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase hinge protein","termid":"PBO:0079914"}


id: PBO:0048846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine-1-phosphate transferase subunits alpha and beta","termid":"PBO:0048846"}


id: MONDO:0010995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Charcot-Marie-Tooth disease type 1 in which the cause of the disease is a mutation in the LITAF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 1","termid":"MONDO:0019011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1C","secondary_identifiers":["DOID:0110151","GARD:1247","MESH:C537984","Orphanet:101083","OMIM:601098","MEDGEN:75728","UMLS:C0270913","icd11.foundation:1224517226"],"synonyms":[{"name":"CMT 1C","type":"related"},{"name":"CMT slow nerve conduction type C","type":"exact"},{"name":"CMT, slow nerve conduction type C","type":"related"},{"name":"CMT1C","type":"exact"},{"name":"Charcot Marie Tooth disease type 1C","type":"related"},{"name":"Charcot-Marie-Tooth disease type 1 caused by mutation in LITAF","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 1C","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 1C","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 1C","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 1C","type":"related"},{"name":"HMSN 1C","type":"related"},{"name":"HMSN IC","type":"exact"},{"name":"HMSN1C","type":"exact"},{"name":"LITAF Charcot-Marie-Tooth disease type 1","type":"exact"},{"name":"neuropathy hereditary motor and sensory type 1C","type":"exact"},{"name":"neuropathy, hereditary motor and sensory, type 1C","type":"related"}],"termid":"MONDO:0010995","xrefs":{"Monarch":{"xref_id":"0010995"}}}


id: GO:1903379
data:
  {"annotated_genes":["SJAG_03048","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102694,116977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic chromosome condensation.","definition_xrefs":["PMID:9490640","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of chromosome condensation","termid":"GO:0060623"},{"relation_name":"regulates","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903379","terms_by_termid":{"GO:1903380":null}}


id: PBO:0076301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptic Ras GTPase activating protein 1","termid":"PBO:0076301"}


id: PBO:0046717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 3","termid":"PBO:0046717"}


id: GO:0015701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of bicarbonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"bicarbonate transport","secondary_identifiers":["Reactome:R-HSA-1480926","Reactome:R-HSA-1475029","Reactome:R-HSA-425381"],"synonyms":[{"name":"hydrogencarbonate transport","type":"exact"}],"termid":"GO:0015701"}


id: PR:P50531
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint protein RAD17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12172:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint protein rad17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.13","secondary_identifiers":["UniProtKB:P50531"],"synonyms":[{"name":"SPAC14C4.13","type":"related"},{"name":"Spom972h-RAD17","type":"exact"}],"termid":"PR:P50531"}


id: MONDO:0019015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Omphalocele is an embryopathy classified in the group of abdominal celosomias and is characterized by a large hernia of the abdominal wall, centered on the umbilical cord, in which the protruding viscera are protected by a sac.","definition_xrefs":["Orphanet:660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal wall malformation","termid":"MONDO:0100298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalocele","secondary_identifiers":["GARD:16540","icd11.foundation:1168696429","SCTID:396347007","MedDRA:10030308","DOID:0060327","HP:0001539","ICD9:756.72","NCIT:C98997","SCTID:18735004","MEDGEN:162756","MESH:D006554","UMLS:C0795690"],"synonyms":[{"name":"congenital omphalocele","type":"exact"},{"name":"eventration","type":"broad"},{"name":"exomphalos","type":"exact"},{"name":"omphalocele","type":"exact"},{"name":"omphalocele (disease)","type":"exact"},{"name":"omphalocoele","type":"exact"}],"termid":"MONDO:0019015","xrefs":{"Monarch":{"xref_id":"0019015"}}}


id: MONDO:0021194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A grouping of diseases based on molecular activity, cellular process or subcellular component.","gene_count":0,"genotype_count":0,"name":"obsolete disease by subcellular system affected (obsolete MONDO:0021194)","termid":"MONDO:0021194","xrefs":{"Monarch":{"xref_id":"0021194"}}}


id: GO:0002108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of LSU-rRNA","termid":"GO:0000470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0042254","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)","termid":"GO:0002108"}


id: MONDO:0004450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A occlusion precerebral artery that involves the carotid artery segment.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occlusion precerebral artery","termid":"MONDO:0003718"},{"relation_name":"is_a","term_name":"carotid artery disorder","termid":"MONDO:0005269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carotid artery occlusion","secondary_identifiers":["UMLS:C0265101","ICD9:433.10","DOID:807","MEDGEN:539079","SCTID:266254007"],"synonyms":[{"name":"carotid artery segment occlusion precerebral artery","type":"exact"},{"name":"occlusion and stenosis of carotid artery","type":"exact"},{"name":"occlusion precerebral artery of carotid artery segment","type":"exact"}],"termid":"MONDO:0004450","xrefs":{"Monarch":{"xref_id":"0004450"}}}


id: FYPO:0004681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the mature polyadenylated 5.8S rRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature 5.8S rRNA level","termid":"FYPO:0001138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased polyadenylated 5.8S rRNA level","synonyms":[{"name":"decreased 5.8S rRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature polyadenylated 5.8S rRNA transcript level","type":"exact"},{"name":"decreased polyadenylated 5.8S rRNA accumulation","type":"related"},{"name":"decreased polyadenylated 5.8S rRNA level during vegetative growth","type":"exact"},{"name":"decreased polyadenylated 5.8S rRNA transcript level","type":"exact"},{"name":"reduced polyadenylated 5.8S rRNA level","type":"exact"}],"termid":"FYPO:0004681"}


id: GO:0080124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pheophytin + H2O = phytol + pheophorbide.","definition_xrefs":["PMID:19304936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"pheophytinase activity","synonyms":[{"name":"pheophytin pheophorbide hydrolase activity","type":"exact"}],"termid":"GO:0080124"}


id: PATO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of single process inhering in a bearer by virtue of whether the bearer is essential or indispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessity of occurrent","termid":"PATO:0001637"}


id: PBO:0075133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein U11/U12 subunit 48","termid":"PBO:0075133"}


id: GO:0005728
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Circular DNA molecules encoding ribosomal RNA that are replicated independently of chromosomal replication. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats.","definition_xrefs":["PMID:12044934","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrachromosomal circular DNA","termid":"GO:0005727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrachromosomal rDNA circle","synonyms":[{"name":"extrachromosomal ribosomal DNA circle","type":"exact"}],"termid":"GO:0005728"}


id: PBO:0066995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 298","termid":"PBO:0066995"}


id: MONDO:0005434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The response of human skin to sun exposure.","definition_xrefs":["EFO:0004795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitivity disease","termid":"MONDO:0006597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin sensitivity to sun","secondary_identifiers":["UMLS:C0349506","MEDGEN:87601"],"termid":"MONDO:0005434","xrefs":{"Monarch":{"xref_id":"0005434"}}}


id: PBO:0085890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in recovery from cell cycle arrest in response to pheromone, in a Far1p-independent pathway; interacts with Far7p, Far8p, Far9p, Far10p, and Far11p; localizes to the endoplasmic reticulum; protein abundance increases in response to DNA replication stress","termid":"PBO:0085890"}


id: GO:1904048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spontaneous neurotransmitter secretion.","definition_xrefs":["GO_REF:0000058","GOC:pad","GOC:PARL","GOC:TermGenie","PMID:22314364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"regulation of spontaneous synaptic transmission","termid":"GO:0150003"},{"relation_name":"regulates","term_name":"spontaneous neurotransmitter secretion","termid":"GO:0061669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of spontaneous neurotransmitter secretion","synonyms":[{"name":"regulation of stimulus-independent neurotransmitter secretion","type":"exact"}],"termid":"GO:1904048"}


id: PBO:0063020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase","termid":"PBO:0063020"}


id: GO:1902995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipid efflux.","definition_xrefs":["GOC:TermGenie","GOC:sjp","GO_REF:0000058","PMID:12042316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid efflux","termid":"GO:1902994"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid transport","termid":"GO:2001140"},{"relation_name":"positively_regulates","term_name":"phospholipid efflux","termid":"GO:0033700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of phospholipid efflux","synonyms":[{"name":"activation of phospholipid efflux","type":"narrow"},{"name":"activation of phospholipid export","type":"narrow"},{"name":"positive regulation of phospholipid export","type":"exact"},{"name":"up regulation of phospholipid efflux","type":"exact"},{"name":"up regulation of phospholipid export","type":"exact"},{"name":"up-regulation of phospholipid efflux","type":"exact"},{"name":"up-regulation of phospholipid export","type":"exact"},{"name":"upregulation of phospholipid efflux","type":"exact"},{"name":"upregulation of phospholipid export","type":"exact"}],"termid":"GO:1902995"}


id: GO:0015295
data:
  {"annotated_genes":["SJAG_04905","SJAG_00057","SJAG_03595","SJAG_02780","SJAG_03608","SJAG_03820","SJAG_04506","SJAG_04673","SJAG_04068","SJAG_01406","SJAG_02779","SJAG_02958","SJAG_03606","SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72143,79598],"is_not":false,"summary":null,"term":"GO:0015295"},{"annotations":[75171,73571,71266,73414,76710,73551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[117512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[100999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[101974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[96103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[72441,73388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[101977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[75918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(out) = solute(in) + H+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_01406":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02958":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04506":null,"SJAG_04673":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"solute:proton symporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"L-idonate/D-gluconate:hydrogen symporter activity","type":"narrow"},{"name":"heavy metal ion:hydrogen symporter activity","type":"narrow"},{"name":"high affinity metal ion uptake transporter activity","type":"narrow"},{"name":"low affinity metal ion uptake transporter activity","type":"narrow"},{"name":"proline/glycine/betaine:hydrogen/sodium symporter activity","type":"narrow"},{"name":"solute:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015295","terms_by_termid":{"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0008506":null,"GO:0015295":null,"GO:0015366":null,"GO:0034216":null,"GO:0097434":null}}


id: PBO:0059507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded cytochrome c oxidase III","termid":"PBO:0059507"}


id: FYPO:0006397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubules become detached from the nuclear envelope (NE). Normally, some cytoplasmic microtubules are nucleated at the NE and remain attached.","definition_xrefs":["PomBase:mah","PMID:16481403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic microtubules","termid":"FYPO:0004088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002399","FYPO:0000054","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"cytoplasmic microtubules detached from nuclear envelope","synonyms":[{"name":"cytoplasmic microtubules detached from nuclear envelope during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubules detached from nuclear envelope during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubules dissociated from nuclear envelope","type":"exact"}],"termid":"FYPO:0006397"}


id: PBO:0073639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 26, pseudogene","termid":"PBO:0073639"}


id: PBO:0113107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity S/T and tyrosine protein kinase; spindle position checkpoint component that works in parallel with Kin4p to prevent mitotic exit network (MEN) activation by the Cdc14 early anaphase release (FEAR) network; roles in chromosome segregation, meiotic entry, genome stability, phosphorylation-dependent degradation of Rcn1p and Cdc6p, inhibition of protein kinase A, transcriptional regulation, inhibition of RNAPIII, calcium stress and inhibition of Clb2p-Cdc28p after nuclear division","termid":"PBO:0113107"}


id: PBO:0080535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASHC5 antisense RNA 1","termid":"PBO:0080535"}


id: GO:1904866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a ventral tegmental area (VTA) over time, from its formation to the mature structure.","definition_xrefs":["GOC:bf","GO_REF:0000094","GOC:PARL","GOC:TermGenie","PMID:26548362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"midbrain development","termid":"GO:0030901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral tegmental area development","synonyms":[{"name":"VTA development","type":"broad"},{"name":"a10a development","type":"exact"},{"name":"area tegmentalis ventralis (Tsai) development","type":"related"},{"name":"area tegmentalis ventralis development","type":"related"},{"name":"tegmentum ventrale development","type":"related"},{"name":"ventral brain stem development","type":"related"},{"name":"ventral tegmental area (Tsai) development","type":"related"},{"name":"ventral tegmental area of tsai development","type":"exact"},{"name":"ventral tegmental nucleus (Rioch) development","type":"related"},{"name":"ventral tegmental nucleus (tsai) development","type":"exact"},{"name":"ventral tegmental nucleus of tsai development","type":"exact"},{"name":"ventral tegmentum development","type":"exact"},{"name":"ventromedial mesencephalic tegmentum development","type":"related"}],"termid":"GO:1904866"}


id: PBO:0044199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin H","termid":"PBO:0044199"}


id: MONDO:0018403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete female infertility due to an implantation defect (obsolete MONDO:0018403)","secondary_identifiers":["ICD10CM:N97.2","Orphanet:399882"],"synonyms":[{"name":"rare female infertility due to an implantation defect","type":"related"}],"termid":"MONDO:0018403","xrefs":{"Monarch":{"xref_id":"0018403"}}}


id: GO:0002779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an antibacterial peptide from a cell or a tissue.","definition_xrefs":["ISBN:0781735149","PMID:11807545","GOC:add","PMID:15638771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide secretion","termid":"GO:0002776"},{"relation_name":"part_of","term_name":"antibacterial peptide production","termid":"GO:0002778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0010467","GO:0051179"],"is_obsolete":false,"name":"antibacterial peptide secretion","termid":"GO:0002779"}


id: GO:0018913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving ethylbenzene (phenylethane), a benzene derivative with an ethyl group attached to the ring, that occur in the absence of oxygen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete anaerobic ethylbenzene metabolic process (obsolete GO:0018913)","synonyms":[{"name":"anaerobic ethylbenzene metabolism","type":"exact"}],"termid":"GO:0018913"}


id: GO:0046206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trypanothione (N1,N6,-bis(glutathionyl)spermidine), an essential redox intermediate in intracellular thiol redox regulation which also plays a role in protecting against oxidative stress.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione derivative metabolic process","termid":"GO:1901685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"trypanothione metabolic process","synonyms":[{"name":"trypanothione metabolism","type":"exact"}],"termid":"GO:0046206"}


id: PBO:0086333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proton-coupled oligopeptide transporter of the plasma membrane; also transports glutathione and phytochelatin; member of the OPT family","termid":"PBO:0086333"}


id: PBO:0039670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 4 subunit beta 1","termid":"PBO:0039670"}


id: PBO:0084390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity zinc transporter of the plasma membrane; transcription is induced under low-zinc conditions by the Zap1p transcription factor","termid":"PBO:0084390"}


id: FYPO:0007895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B is increased at pericentromeric heterochromatin. Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PMID:34731638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein ubiquitination during vegetative growth","termid":"FYPO:0002082"},{"relation_name":"is_a","term_name":"abnormal histone H2B-K119 ubiquitination during vegetative growth","termid":"FYPO:0005607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H2B-K119 ubiquitination at pericentromeric heterochromatin","termid":"FYPO:0007895"}


id: PBO:0087282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Signal recognition particle (SRP) receptor alpha subunit; contain GTPase domains; involved in SRP-dependent protein targeting; interacts with the beta subunit, Srp102p","termid":"PBO:0087282"}


id: GO:0047153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dCMP + H2O = (6S)-5,6,7,8-tetrahydrofolate + 5-hydroxymethyldeoxycytidylate.","definition_xrefs":["EC:2.1.2.8","RHEA:11280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"deoxycytidylate 5-hydroxymethyltransferase activity","secondary_identifiers":["MetaCyc:2.1.2.8-RXN","KEGG_REACTION:R01669"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:deoxycytidylate 5-hydroxymethyltransferase activity","type":"related"},{"name":"d-cytidine 5'-monophosphate hydroxymethylase activity","type":"related"},{"name":"dCMP hydroxymethylase activity","type":"related"},{"name":"deoxyCMP hydroxymethylase activity","type":"related"},{"name":"deoxycytidylate hydroxymethylase activity","type":"related"},{"name":"deoxycytidylate hydroxymethyltransferase activity","type":"exact"},{"name":"deoxycytidylic hydroxymethylase activity","type":"related"}],"termid":"GO:0047153"}


id: GO:0043805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (indol-3-yl)pyruvate + CoA + oxidized ferredoxin = S-2-(indol-3-yl)acetyl-CoA + CO2 + reduced ferredoxin.","definition_xrefs":["EC:1.2.7.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"indolepyruvate ferredoxin oxidoreductase activity","secondary_identifiers":["MetaCyc:1.2.7.8-RXN","RHEA:12645"],"synonyms":[{"name":"3-(indol-3-yl)pyruvate synthase (ferredoxin) activity","type":"related"},{"name":"3-(indol-3-yl)pyruvate:ferredoxin oxidoreductase (decarboxylating, CoA-indole-acetylating)","type":"related"},{"name":"IOR","type":"related"},{"name":"indolepyruvate oxidoreductase activity","type":"related"}],"termid":"GO:0043805"}


id: MONDO:1010758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrodermatitis enteropathica that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrodermatitis enteropathica, non-human animal","termid":"MONDO:1010133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrodermatitis enteropathica, domestic cat","secondary_identifiers":["OMIA:000593-9685"],"termid":"MONDO:1010758","xrefs":{"Monarch":{"xref_id":"1010758"}}}


id: PBO:0027441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_minichromosome_loss_during_vegetative_growth","termid":"PBO:0027441"}


id: PBO:0055477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2910","termid":"PBO:0055477"}


id: MONDO:0012655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"juvenile myoclonic epilepsy","termid":"MONDO:0009696"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonic epilepsy, juvenile, susceptibility to, 4","secondary_identifiers":["MEDGEN:370067","DOID:0111327","UMLS:C1969656","OMIM:611364"],"synonyms":[{"name":"EJM4","type":"exact"},{"name":"myoclonic epilepsy, juvenile, 4","type":"exact"},{"name":"myoclonic epilepsy, juvenile, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0012655","xrefs":{"Monarch":{"xref_id":"0012655"}}}


id: PBO:0051898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGA6 antisense RNA 1","termid":"PBO:0051898"}


id: FYPO:0004015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a normal number of mitochondria.","definition_xrefs":["PomBase:mah","PMID:2065367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitochondrion","termid":"FYPO:0006034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"mitochondria present in normal numbers","synonyms":[{"name":"mitochondria present in normal numbers during mitotic cell cycle","type":"exact"},{"name":"mitochondria present in normal numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0004015"}


id: MONDO:0030970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 106, susceptibility to viral infections","secondary_identifiers":["MEDGEN:1804672","OMIM:619935","UMLS:C5677009"],"synonyms":[{"name":"IFNAR1 deficiency","type":"exact"},{"name":"IMD106","type":"exact"},{"name":"immunodeficiency 106, susceptibility to viral infections","type":"exact"}],"termid":"MONDO:0030970","xrefs":{"Monarch":{"xref_id":"0030970"}}}


id: PBO:0004230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease Uve1","termid":"PBO:0004230"}


id: GO:1900579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (17Z)-protosta-17(20),24-dien-3beta-ol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"tetracyclic triterpenoid metabolic process","termid":"GO:0010685"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(17Z)-protosta-17(20),24-dien-3beta-ol metabolic process","synonyms":[{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol metabolism","type":"exact"}],"termid":"GO:1900579"}


id: GO:0009017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-succinyl-L-glutamate + H2O = L-glutamate + succinate.","definition_xrefs":["RHEA:15169","EC:3.5.1.96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"succinylglutamate desuccinylase activity","secondary_identifiers":["KEGG_REACTION:R00411","MetaCyc:SUCCGLUDESUCC-RXN"],"synonyms":[{"name":"AstE","type":"related"},{"name":"N-succinyl-L-glutamate amidohydrolase activity","type":"related"},{"name":"N2-succinylglutamate desuccinylase activity","type":"exact"},{"name":"SGDS","type":"related"}],"termid":"GO:0009017"}


id: PBO:0089775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-GATA-type Gaf1","termid":"PBO:0089775"}


id: GO:0098680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1); the addition of a terminal nucleotide to an RNA molecule in the absence of a nucleic acid template.","definition_xrefs":["GOC:nc","GOC:BHF","GOC:BHF_telomere","PMID:15994230","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0016740","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"template-free RNA nucleotidyltransferase","termid":"GO:0098680"}


id: GO:0045914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving catecholamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of catecholamine metabolic process","termid":"GO:0042069"},{"relation_name":"negatively_regulates","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of catecholamine metabolic process","synonyms":[{"name":"down regulation of catecholamine metabolic process","type":"exact"},{"name":"down-regulation of catecholamine metabolic process","type":"exact"},{"name":"downregulation of catecholamine metabolic process","type":"exact"},{"name":"inhibition of catecholamine metabolic process","type":"narrow"},{"name":"negative regulation of catecholamine metabolism","type":"exact"}],"termid":"GO:0045914"}


id: GO:0051550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aurones, a series of plant flavonoids that provide a yellow colour to flowers. They have the basic skeletal structure of two benzene rings joined by a linear C3 chain (C6-C3-C6). Aurones exist mostly as 6-O-glucosides.","definition_xrefs":["PMID:20035037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aurone metabolic process","synonyms":[{"name":"aurone metabolism","type":"exact"},{"name":"benzalcoumaran-3-one metabolic process","type":"exact"},{"name":"benzalcoumaran-3-one metabolism","type":"exact"}],"termid":"GO:0051550"}


id: PBO:0030407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-Glc2Man9GlcNAc_absent_from_cell","termid":"PBO:0030407"}


id: PBO:0031286
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing","termid":"PBO:0031286"}


id: PBO:0085739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in transcription of rDNA by RNA polymerase I; transcription factor, member of UAF (upstream activation factor) family along with Rrn9p and Rrn10p","termid":"PBO:0085739"}


id: PR:O14263
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC7D4.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C7D4.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.08","synonyms":[{"name":"Spom972h-SPAC7D4.08","type":"exact"}],"termid":"PR:O14263"}


id: MONDO:0000610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation of a non-infectious thrombus, referred to as vegetation, on previously undamaged endocardium. It usually occurs as a complication of connective-tissue diseases and cancers because of the associated hypercoagulable state (see thrombophilia).","definition_xrefs":["MESH:D059905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombotic disease","termid":"MONDO:0000831"},{"relation_name":"is_a","term_name":"blood coagulation disease","termid":"MONDO:0001531"},{"relation_name":"is_a","term_name":"endocarditis","termid":"MONDO:0005025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005570"],"is_obsolete":false,"name":"marantic endocarditis","secondary_identifiers":["SCTID:57181007","DOID:0060068","UMLS:C0221390","MEDGEN:452215"],"synonyms":[{"name":"non-bacterial thrombotic endocarditis","type":"exact"},{"name":"nonbacterial thrombotic endocarditis","type":"exact"}],"termid":"MONDO:0000610","xrefs":{"Monarch":{"xref_id":"0000610"}}}


id: MONDO:0017253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anterior uveitis (obsolete MONDO:0017253)","termid":"MONDO:0017253","xrefs":{"Monarch":{"xref_id":"0017253"}}}


id: PBO:0068427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, ribosomal 45S cluster 2","termid":"PBO:0068427"}


id: PBO:0053797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1052","termid":"PBO:0053797"}


id: MONDO:0019018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Takotsubo cardiomyopathy (TC) is a recently described acute cardiac syndrome that mimics acute myocardial infarction and is characterized by ischemic chest symptoms, an elevated ST segment on electrocardiogram, and elevated levels of cardiac disease markers.","definition_xrefs":["Orphanet:66529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Tako-tsubo cardiomyopathy","secondary_identifiers":["UMLS:C1739395","NORD:2006","SCTID:441541008","GARD:9400","ICD9:429.83","NCIT:C85181","EFO:1002000","icd11.foundation:478139552","MEDGEN:366029","MESH:D054549"],"synonyms":[{"name":"ASC","type":"related"},{"name":"Tako tsubo syndrome","type":"related"},{"name":"Tako-Tsubo syndrome","type":"exact"},{"name":"Takotsubo Cardiomyopathy","type":"exact"},{"name":"Takotsubo cardiomyopathy","type":"exact"},{"name":"Takotsubo syndrome","type":"exact"},{"name":"acute stress cardiomyopathy","type":"related"},{"name":"ampulla cardiomyopathy","type":"exact"},{"name":"apical ballooning syndrome","type":"exact"},{"name":"ballooning cardiomyopathy","type":"exact"},{"name":"broken heart syndrome","type":"exact"},{"name":"broken-heart syndrome","type":"related"},{"name":"left ventricular transient apical ballooning","type":"related"},{"name":"stress cardiomyopathy","type":"exact"},{"name":"stress-induced cardiomyopathy","type":"related"},{"name":"transient antero-apical dyskinesia","type":"related"},{"name":"transient left ventricular apical ballooning syndrome","type":"exact"}],"termid":"MONDO:0019018","xrefs":{"Monarch":{"xref_id":"0019018"}}}


id: PBO:0051944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-tetrakisphosphate 1-kinase","termid":"PBO:0051944"}


id: PBO:0053696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 896","termid":"PBO:0053696"}


id: PBO:0071737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 35","termid":"PBO:0071737"}


id: PBO:0070651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 22","termid":"PBO:0070651"}


id: PBO:0076627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta induced lncRNA","termid":"PBO:0076627"}


id: GO:0001309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Progressive reduction in length of the telomeres, the termini of eukaryotic chromosomes, that occurs as part of the cellular aging process.","definition_xrefs":["PMID:9891807","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent telomere shortening (obsolete GO:0001309)","synonyms":[{"name":"age-dependent telomere shortening","type":"exact"}],"termid":"GO:0001309"}


id: GO:0030976
data:
  {"annotated_genes":["SJAG_03743","SJAG_03985","SJAG_02464","SJAG_02734","SJAG_04842","SJAG_00706"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57617,58656,59055,61882,64707,73610],"is_not":false,"summary":null,"term":"GO:0030976"}]},"cv_name":"molecular_function","definition":"Binding to thiamine pyrophosphate, the diphosphoric ester of thiamine. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"quaternary ammonium group binding","termid":"GO:0050997"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00706":null,"SJAG_02464":null,"SJAG_02734":null,"SJAG_03743":null,"SJAG_03985":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"thiamine pyrophosphate binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"TPP binding","type":"exact"},{"name":"aneurine pyrophosphate binding","type":"exact"},{"name":"cocarboxylase binding","type":"exact"},{"name":"diphosphothiamin binding","type":"exact"},{"name":"thiamin pyrophosphate binding","type":"exact"}],"termid":"GO:0030976","terms_by_termid":{"GO:0030976":null}}


id: MONDO:0004635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the postcricoid region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypopharynx cancer","termid":"MONDO:0005806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"postcricoid region cancer","secondary_identifiers":["UMLS:C0496769","DOID:8660","ICD9:148.0","MEDGEN:141673","NCIT:C9323","SCTID:363400004"],"synonyms":[{"name":"malignant neoplasm of postcricoid area","type":"exact"},{"name":"malignant neoplasm of the postcricoid area","type":"exact"},{"name":"malignant postcricoid neoplasm","type":"exact"},{"name":"malignant postcricoid tumor","type":"exact"},{"name":"malignant postcricoid tumour","type":"exact"},{"name":"malignant tumor of pharyngoesophageal junction","type":"exact"},{"name":"malignant tumor of postcricoid area","type":"exact"},{"name":"malignant tumor of the postcricoid area","type":"exact"},{"name":"malignant tumour of pharyngoesophageal junction","type":"exact"},{"name":"malignant tumour of postcricoid area","type":"exact"},{"name":"malignant tumour of the postcricoid area","type":"exact"}],"termid":"MONDO:0004635","xrefs":{"Monarch":{"xref_id":"0004635"}}}


id: GO:0047682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic primary alcohol + O2 = an aromatic aldehyde + H2O2.","definition_xrefs":["MetaCyc:ARYL-ALCOHOL-OXIDASE-RXN","EC:1.1.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aryl-alcohol oxidase activity","secondary_identifiers":["RHEA:17541"],"synonyms":[{"name":"arom. alcohol oxidase activity","type":"related"},{"name":"aryl alcohol oxidase activity","type":"related"},{"name":"aryl-alcohol:oxygen oxidoreductase activity","type":"related"},{"name":"veratryl alcohol oxidase activity","type":"narrow"}],"termid":"GO:0047682"}


id: GO:1901392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transforming growth factor beta1 activation.","definition_xrefs":["GOC:TermGenie","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta1 activation (obsolete GO:1901392)","synonyms":[{"name":"regulation of L-TGF-beta 1 activation","type":"exact"},{"name":"regulation of TGF-beta 1 activation","type":"exact"},{"name":"regulation of TGFB1 activation","type":"exact"},{"name":"regulation of TGFbeta 1 activation","type":"exact"},{"name":"regulation of latent-TGF-beta1 activation","type":"exact"},{"name":"regulation of transforming growth factor-beta1 activation","type":"exact"}],"termid":"GO:1901392"}


id: GO:0043900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a multi-organism process, a process in which an organism has an effect on another organism of the same or different species.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of multi-organism process (obsolete GO:0043900)","termid":"GO:0043900"}


id: PBO:0040030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing X-linked 5","termid":"PBO:0040030"}


id: PBO:0080858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 interacting factor homolog A, membrane trafficking protein","termid":"PBO:0080858"}


id: PBO:0067531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 675, pseudogene","termid":"PBO:0067531"}


id: PBO:0038332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-connecting_branch_of","termid":"PBO:0038332"}


id: FYPO:0000313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a germ tube with abnormal morphology (i.e. size, shape, or structure), and does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with abnormal germ tube morphology","synonyms":[{"name":"inviable after spore germination, undivided cell with abnormal germ tube morphology","type":"exact"},{"name":"inviable following spore germination, without cell division with abnormal germ tube morphology","type":"exact"},{"name":"inviable germinated spore, without cell division, with abnormal germ tube morphology","type":"exact"},{"name":"lethal after spore germination, without cell division, with abnormal germ tube morphology","type":"exact"}],"termid":"FYPO:0000313"}


id: PBO:0066087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 1","termid":"PBO:0066087"}


id: PBO:0066778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 76","termid":"PBO:0066778"}


id: GO:1905162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phagosome maturation.","definition_xrefs":["GO_REF:0000058","PMID:23303671","GOC:bf","GOC:TermGenie","PMID:16908865","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phagosome maturation","termid":"GO:1905162"}


id: PBO:0046541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group E member 4","termid":"PBO:0046541"}


id: PBO:0082978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic trifunctional enzyme; catalyzes sequential reactions 10-formyl-THF synthetase (EC 6.3.4.3), 5,10-methenyl-THF cyclohydrolase (EC 3.5.4.9), and 5,10-methylene-THF dehydrogenase (EC 1.5.1.5), to supply forms of activated one-carbon units required for biosynthesis of purines, histidine, methionine, pantothenic acid, the formyl group of mitochondrial fMet-tRNAfMet, and the methyl group of thymidylate; null mutation causes auxotrophy for adenine and histidine in rich medium","termid":"PBO:0082978"}


id: SO:0001634
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within a half KB of the end of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"downstream_gene_variant","termid":"SO:0001632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"500B_downstream_variant","synonyms":[{"name":"500B downstream variant","type":"exact"},{"name":"near-gene-3","type":"exact"}],"termid":"SO:0001634"}


id: PBO:0054578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1980","termid":"PBO:0054578"}


id: GO:1990655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 4 iron, 3 sulfur (4Fe-3S) cluster, an uncommon iron-sulfur cluster with unique properties found in oxygen-tolerant Ni-Fe hydrogenases of various bacteria.","definition_xrefs":["PMID:23267108","GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"4 iron, 3 sulfur cluster binding","synonyms":[{"name":"4Fe-3S cluster binding","type":"related"}],"termid":"GO:1990655"}


id: MONDO:0004501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign, asymptomatic neoplasm that arises from the fallopian tube. The tumors are round and solitary and contain connective tissue and cystic structures lined by serous-type epithelium. The majority of cases are incidental findings during operation for an unrelated gynecologic disorder.","definition_xrefs":["NCIT:C40114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube serous adenofibroma","termid":"MONDO:0003461"},{"relation_name":"is_a","term_name":"cystadenofibroma","termid":"MONDO:0003464"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube cystadenofibroma","secondary_identifiers":["DOID:8211","UMLS:C1517111","MEDGEN:273292"],"synonyms":[{"name":"cystadenofibroma of fallopian tube","type":"exact"},{"name":"fallopian tube cystadenofibroma","type":"exact"},{"name":"fallopian tube serous cystadenofibroma","type":"exact"}],"termid":"MONDO:0004501","xrefs":{"Monarch":{"xref_id":"0004501"}}}


id: PBO:0078823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 2-6","termid":"PBO:0078823"}


id: FYPO:0003698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleolus contains one or more spherical structures of great electron density that are not found in wild type cells.","definition_xrefs":["PMID:9211982","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleolar morphology","termid":"FYPO:0000361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal dense body present in nucleolus","synonyms":[{"name":"abnormal dense body present in nucleolus during mitotic cell cycle","type":"related"},{"name":"abnormal dense body present in nucleolus during vegetative growth","type":"exact"}],"termid":"FYPO:0003698"}


id: GO:0046133
data:
  {"annotated_genes":["SJAG_03771","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70176,70274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any ribonucleoside, a nucleoside in which a pyrimidine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside catabolic process","termid":"GO:0042454"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside metabolic process","termid":"GO:0046131"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside catabolic process","termid":"GO:0046135"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01673":null,"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleoside catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine ribonucleoside breakdown","type":"exact"},{"name":"pyrimidine ribonucleoside catabolism","type":"exact"},{"name":"pyrimidine ribonucleoside degradation","type":"exact"}],"termid":"GO:0046133","terms_by_termid":{"GO:0009972":null}}


id: PBO:0050647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class A member 3, pseudogene","termid":"PBO:0050647"}


id: PBO:0071110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 112","termid":"PBO:0071110"}


id: MONDO:0035554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete complete atrioventricular septal defect without ventricular hypoplasia (obsolete MONDO:0035554)","secondary_identifiers":["Orphanet:576227"],"termid":"MONDO:0035554","xrefs":{"Monarch":{"xref_id":"0035554"}}}


id: PBO:0083228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with YCR047C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083228"}


id: PBO:0065674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRT divergent transcript","termid":"PBO:0065674"}


id: GO:0141199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of GDP-mannose from glucose.","definition_xrefs":["PMID:21273394","PMID:9287314"],"gene_count":0,"genotype_count":0,"name":"obsolete GDP-mannose biosynthetic process from glucose (obsolete GO:0141199)","termid":"GO:0141199"}


id: FYPO:0002323
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of all-trans-geranylgeranyl diphosphate (GGPP) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular GGPP level","synonyms":[{"name":"decreased cellular 2-trans,6-trans,10-trans-geranylgeranyl diphosphate level","type":"exact"},{"name":"decreased cellular GGPP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular GGPP level during vegetative growth","type":"exact"},{"name":"decreased cellular all-trans-geranylgeranyl diphosphate level","type":"exact"},{"name":"decreased cellular all-trans-geranylgeranyl pyrophosphate level","type":"exact"},{"name":"reduced cellular GGPP level","type":"exact"}],"termid":"FYPO:0002323"}


id: PBO:0044595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 4 like 1","termid":"PBO:0044595"}


id: PBO:0070441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase A pseudogene 1","termid":"PBO:0070441"}


id: MONDO:0030044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudo-TORCH syndrome","termid":"MONDO:0009626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"pseudo-TORCH syndrome 3","secondary_identifiers":["OMIM:618886","UMLS:C5394391","MEDGEN:1708513"],"synonyms":[{"name":"PSEUDO-TORCH SYNDROME 3","type":"exact"},{"name":"PTORCH3","type":"exact"},{"name":"pseudo-torch syndrome 3","type":"exact"}],"termid":"MONDO:0030044","xrefs":{"Monarch":{"xref_id":"0030044"}}}


id: PBO:0084698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial flavin adenine dinucleotide transporter; FAD is a synthesis product of riboflavin; human homolog SLC25A32 is implicated in multiple acyl-CoA dehydrogenase deficiency (MADD) or glutaric aciduria type II (GAII), and can complement yeast null mutant","termid":"PBO:0084698"}


id: MONDO:0011214
data:
  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85896],"is_not":false,"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","definition":"Progressive familial intrahepatic cholestasis type 3 (PFIC3), a type of progressive familial intrahepatic cholestasis (PFIC), is a late-onset hereditary disorder in bile formation that is hepatocellular in origin. Onset may occur from infancy to young adulthood.","definition_xrefs":["Orphanet:79305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"progressive familial intrahepatic cholestasis type 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1289","icd11.foundation:1276600959","OMIM:602347","DOID:0070223","MESH:C535935","NORD:1416","NANDO:1201045","MEDGEN:356333","UMLS:C1865643"],"synonyms":[{"name":"ABCB4 progressive familial intrahepatic cholestasis","type":"exact"},{"name":"MDR3 Deficiency","type":"exact"},{"name":"Mdr3 deficiency","type":"related"},{"name":"PFIC3","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic 3","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 3","type":"related"},{"name":"cholestasis, progressive familial intrahepatic, type 3","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, with elevated serum gamma-glutamyltransferase","type":"related"},{"name":"progressive familial intrahepatic cholestasis caused by mutation in ABCB4","type":"exact"},{"name":"progressive familial intrahepatic cholestasis with elevated serum gamma-glutamyltransferase","type":"related"}],"termid":"MONDO:0011214","terms_by_termid":{"MONDO:0011214":null},"xrefs":{"Monarch":{"xref_id":"0011214"}}}


id: SO:0000501
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type of non-canonical base-pairing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base_pair","termid":"SO:0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reverse_Hoogsteen_base_pair","synonyms":[{"name":"reverse Hoogsteen base pair","type":"exact"}],"termid":"SO:0000501"}


id: GO:0098782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a channel that opens in response to a mechanical stress.","definition_xrefs":["PMID:25471887","PMID:22282805","PMID:25500157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"mechanosensitive monoatomic cation channel activity","termid":"GO:0140135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"mechanosensitive potassium channel activity","synonyms":[{"name":"mechanically-gated potassium channel activity","type":"exact"}],"termid":"GO:0098782"}


id: PBO:0086691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; induced by treatment with 8-methoxypsoralen and UVA irradiation","termid":"PBO:0086691"}


id: MONDO:0020476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesial temporal lobe epilepsy with hippocampal sclerosis is a rare epilepsy syndrome defined by seizures originating in limbic areas of the mesial temporal lobe, particularly in the hippocampus, amygdala, and in the parahippocampal gyrus and its connections, and hippocampal sclerosis, usually unilateral or asymmetric. It is frequently associated with an initial precipitating event, such as febrile seizures, hypoxia, intracranial infection or head trauma, most often occurring in the first five years of life, followed by a latent period without seizures. Typical seizures consist of a characteristic aura that is frequently a rising epigastric sensation associated with emotional disturbances, illusions, and autonomic symptoms (widened pupils, palpitations), progressive impairment of consciousness, oro-alimentary automatisms (lip smacking, chewing, licking, tooth grinding), behavioral arrest, head deviation, dystonic postures, hand and verbal automatisms. Seizures are followed by postictal dysfunction. Initially, seizures are easily controlled with antiepileptic drugs, later they frequently become refractory and associated with progressive behavioral changes and memory deficits.","definition_xrefs":["Orphanet:99701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial partial epilepsy","termid":"MONDO:0017704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"mesial temporal lobe epilepsy with hippocampal sclerosis","secondary_identifiers":["UMLS:C4749367","NANDO:1200588","MEDGEN:1659013","GARD:19684"],"synonyms":[{"name":"MTLE-HS","type":"exact"}],"termid":"MONDO:0020476","xrefs":{"Monarch":{"xref_id":"0020476"}}}


id: PR:Q9USQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A chromosome transmission fidelity protein 18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23389:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome transmission fidelity protein 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC902.02c","secondary_identifiers":["UniProtKB:Q9USQ1"],"synonyms":[{"name":"SPBC902.02c","type":"related"},{"name":"Spom972h-CHTF18","type":"exact"},{"name":"chl12","type":"related"}],"termid":"PR:Q9USQ1"}


id: PBO:0001815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDR subfamily","termid":"PBO:0001815"}


id: GO:0031401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein.","definition_xrefs":["GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein modification process","synonyms":[{"name":"activation of protein modification","type":"narrow"},{"name":"stimulation of protein modification","type":"narrow"},{"name":"up regulation of protein modification","type":"exact"},{"name":"up-regulation of protein modification","type":"exact"},{"name":"upregulation of protein modification","type":"exact"}],"termid":"GO:0031401"}


id: PBO:0065866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB23, member RAS oncogene family","termid":"PBO:0065866"}


id: GO:1904020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G protein-coupled receptor internalization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24732013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor internalization","termid":"GO:0002090"},{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"G protein-coupled receptor internalization","termid":"GO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of G protein-coupled receptor internalization","synonyms":[{"name":"regulation of G-protein-coupled receptor internalization","type":"exact"}],"termid":"GO:1904020"}


id: PBO:0003225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fhn1 plasma membrane organization protein","termid":"PBO:0003225"}


id: MONDO:0006952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bilateral retinopathy characterized by neovascularization, scarring, retinal detachment, and eventually blindness. It may be mild or severe. It occurs in babies born prematurely. Causes include oxygen toxicity and hypoxia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FZD4-related exudative vitreoretinopathy","termid":"MONDO:1040041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"retinopathy of prematurity","secondary_identifiers":["ICD9:362.20","UMLS:C0035344","EFO:1001158","icd11.foundation:947283385","DOID:13025","MEDGEN:48438","ICD9:362.21","MESH:D012178","GARD:5695","NCIT:C34982","NORD:1663","MedDRA:10038933","SCTID:415297005","Orphanet:90050"],"synonyms":[{"name":"ROP","type":"exact"},{"name":"Terry syndrome","type":"exact"},{"name":"premature retinopathy","type":"exact"},{"name":"retrolental fibroplasia","type":"exact"}],"termid":"MONDO:0006952","xrefs":{"Monarch":{"xref_id":"0006952"}}}


id: MONDO:0029812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete laminopathy with lipodystrophy (obsolete MONDO:0029812)","secondary_identifiers":["Orphanet:300763"],"termid":"MONDO:0029812","xrefs":{"Monarch":{"xref_id":"0029812"}}}


id: PBO:0113387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by expression profiling and mass spectrometry; localizes to the peroxisome in a Pex5p-dependent manner in oleate","termid":"PBO:0113387"}


id: GO:0034764
data:
  {"annotated_genes":["SJAG_04551","SJAG_04920","SJAG_02605","SJAG_03591","SJAG_00991","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"},{"annotations":[90269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[110848,93676,92082,99202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[93677,92083,99203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[93678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_04551":null,"SJAG_04920":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of transmembrane transport","type":"narrow"},{"name":"positive regulation of membrane transport","type":"exact"},{"name":"stimulation of transmembrane transport","type":"narrow"},{"name":"up regulation of transmembrane transport","type":"exact"},{"name":"up-regulation of transmembrane transport","type":"exact"},{"name":"upregulation of transmembrane transport","type":"exact"}],"termid":"GO:0034764","terms_by_termid":{"GO:0035432":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905665":null}}


id: GO:0006097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A modification of the TCA cycle occurring in some plants and microorganisms, in which isocitrate is cleaved to glyoxylate and succinate. Glyoxylate can then react with acetyl-CoA to form malate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"glyoxylate metabolic process","termid":"GO:0046487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glyoxylate cycle","secondary_identifiers":["MetaCyc:GLYOXYLATE-BYPASS","Wikipedia:Glyoxylate_cycle"],"synonyms":[{"name":"glyoxylate bypass","type":"exact"}],"termid":"GO:0006097"}


id: GO:0160083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an activated T cell acquires specialized features of an exhausted T cell.","definition_xrefs":["PMID:21739672","PMID:31570879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exhausted T cell differentiation","synonyms":[{"name":"T cell dysfuction","type":"related"},{"name":"T cell exhaustion","type":"exact"}],"termid":"GO:0160083"}


id: PBO:0060773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B7","termid":"PBO:0060773"}


id: PBO:0004408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp7 (predicted)","termid":"PBO:0004408"}


id: PBO:0065322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 45, pseudogene","termid":"PBO:0065322"}


id: PBO:0055643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3082","termid":"PBO:0055643"}


id: PBO:0088514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb1","termid":"PBO:0088514"}


id: PBO:0068579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 30, pseudogene","termid":"PBO:0068579"}


id: MONDO:0003350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm. It is characterized by the presence of malignant smooth muscle cells with granular cytoplasmic changes.","definition_xrefs":["NCIT:C27494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granular cell cancer","termid":"MONDO:0003252"},{"relation_name":"is_a","term_name":"central nervous system leiomyosarcoma","termid":"MONDO:0003349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"granular cell leiomyosarcoma","secondary_identifiers":["MEDGEN:234321","DOID:5258","UMLS:C1333871"],"synonyms":[{"name":"granular cell leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003350","xrefs":{"Monarch":{"xref_id":"0003350"}}}


id: GO:0097326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a melanocyte to another cell via adhesion molecules.","definition_xrefs":["CL:0000148","PMID:22637532","GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell-cell adhesion","termid":"GO:0090136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"melanocyte adhesion","termid":"GO:0097326"}


id: GO:0060265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases made as a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response","termid":"GO:0050729"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of respiratory burst involved in inflammatory response","termid":"GO:0060264"},{"relation_name":"is_a","term_name":"positive regulation of respiratory burst","termid":"GO:0060267"},{"relation_name":"positively_regulates","term_name":"respiratory burst involved in inflammatory response","termid":"GO:0002536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of respiratory burst involved in inflammatory response","synonyms":[{"name":"positive regulation of respiratory burst involved in acute inflammatory response","type":"broad"}],"termid":"GO:0060265"}


id: PBO:0110979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 molecule (IN blood group)","termid":"PBO:0110979"}


id: GO:0034568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isoproturon + H2O = formaldehyde + monodemethylisoproturon + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0892"],"gene_count":0,"genotype_count":0,"name":"obsolete isoproturon dimethylaminedehydrogenase activity (obsolete GO:0034568)","termid":"GO:0034568"}


id: PBO:0068195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 502","termid":"PBO:0068195"}


id: PBO:0074568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 22","termid":"PBO:0074568"}


id: GO:0010657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a muscle cell and result in its death. A muscle cell is a mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle.","definition_xrefs":["GOC:mtg_apoptosis","GOC:tb","CL:0000187","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell apoptotic process","synonyms":[{"name":"muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010657"}


id: MONDO:0015065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low or intermediate grade tumor with neuroendocrine differentiation that arises from the ileum.","definition_xrefs":["NCIT:C135092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0002995"},{"relation_name":"is_a","term_name":"ileal neoplasm","termid":"MONDO:0006801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"ileal neuroendocrine tumor, well differentiated, low or intermediate grade","secondary_identifiers":["GARD:19753","MEDGEN:1611292","Orphanet:100078","UMLS:C4525628"],"synonyms":[{"name":"ileal neuroendocrine neoplasm","type":"exact"},{"name":"ileal neuroendocrine tumor","type":"related"},{"name":"ileal neuroendocrine tumour","type":"related"}],"termid":"MONDO:0015065","xrefs":{"Monarch":{"xref_id":"0015065"}}}


id: SO:0000082
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000082 processed_transcript_attribute (obsolete SO:0000082)","termid":"SO:0000082"}


id: PBO:0031865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-develops_from","termid":"PBO:0031865"}


id: GO:0038019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the return of a Wnt receptor to an active state at the plasma membrane. An active state is when the receptor is ready to receive a Wnt signal. Internalized Wnt receptors can be recycled to the plasma membrane or sorted to lysosomes for protein degradation.","definition_xrefs":["GOC:signaling","GOC:bf","PMID:19643732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor recycling","termid":"GO:0001881"},{"relation_name":"part_of","term_name":"positive regulation of Wnt signaling pathway","termid":"GO:0030177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Wnt receptor recycling","synonyms":[{"name":"Frizzled recycling","type":"narrow"}],"termid":"GO:0038019"}


id: GO:0006605
data:
  {"annotated_genes":["SJAG_01442","SJAG_01112","SJAG_01641","SJAG_02354","SJAG_03976","SJAG_03415","SJAG_03416","SJAG_00891","SJAG_02524","SJAG_02330","SJAG_03396","SJAG_04763","SJAG_02016","SJAG_01367","SJAG_01488","SJAG_01120","SJAG_04072","SJAG_02456","SJAG_01597","SJAG_01004","SJAG_01349","SJAG_01360","SJAG_01281","SJAG_02588","SJAG_01615","SJAG_04432","SJAG_01684","SJAG_04208","SJAG_04533","SJAG_02397","SJAG_00181","SJAG_03970","SJAG_04336","SJAG_02797","SJAG_02917","SJAG_02809","SJAG_00959","SJAG_01750","SJAG_02320","SJAG_07010","SJAG_03955","SJAG_02693","SJAG_00326","SJAG_01951","SJAG_00204","SJAG_01527","SJAG_00687","SJAG_00895","SJAG_05259","SJAG_02077","SJAG_04996","SJAG_00175","SJAG_00569","SJAG_03648","SJAG_03411","SJAG_01558","SJAG_00360","SJAG_03737","SJAG_04218","SJAG_02208","SJAG_02361","SJAG_03385","SJAG_01780","SJAG_16459","SJAG_03358","SJAG_04129","SJAG_00208","SJAG_01088","SJAG_00603","SJAG_01229","SJAG_01782","SJAG_03250","SJAG_01282","SJAG_01640","SJAG_03502","SJAG_01759","SJAG_01647","SJAG_00108","SJAG_02398","SJAG_03315","SJAG_00380","SJAG_04014","SJAG_03515","SJAG_01496","SJAG_00373","SJAG_03560","SJAG_01879","SJAG_00404","SJAG_02867","SJAG_01733","SJAG_03684","SJAG_04552","SJAG_05210","SJAG_00196","SJAG_00064","SJAG_01560","SJAG_00564","SJAG_02355","SJAG_01949","SJAG_04451","SJAG_01299","SJAG_03781","SJAG_04641","SJAG_01840","SJAG_01981","SJAG_02034"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107612,98236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006613"},{"annotations":[113615,91977,88465,91842,88352,106078,88430,114753,91408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[97461,98814,95388],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160203"},{"annotations":[70267,79870,109643,96068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006620"},{"annotations":[97661,98373,73519,108620,80627],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"},{"annotations":[77536,77917],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045041"},{"annotations":[107876,99566,97214,106494,115533,117081,107898,107821,99864,88672,103596,105508,110184,91236,99750,103009,94856,112107,117549,89881,100638],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030150"},{"annotations":[116569,107877,78224,90732,74345,75972,88998,73837,103237,107899,113503],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045039"},{"annotations":[98555,76946,112101,98906,110708,110354,59099,70313,107878],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045040"},{"annotations":[80557,77196,80326,102524,78560,70201],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"},{"annotations":[69489,98738,70021,87986,98689,112866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045047"},{"annotations":[96232,60330,75369,71457,73327,75225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006612"},{"annotations":[102774,98719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006626"},{"annotations":[97287,90777,103408,95763,90769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006625"},{"annotations":[91344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[77602,71595,75928,78467,80707,73144,77943,96880,74288,77473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[66560,73338,70266,69279,94618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[91970,115434,114673],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[75768,73534,74029,102898,108622,98375],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The process of targeting specific proteins to particular regions of the cell, typically membrane-bounded subcellular organelles. 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id: MOD:00643
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Artifact","definition_xrefs":["PubMed:11968134","Unimod:337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylamine Michael addition derivatized residue","synonyms":[{"name":"Methylamine","type":"related"},{"name":"Michael addition with methylamine","type":"related"}],"termid":"MOD:00643"}


id: SO:0000000
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000000 Sequence_Ontology (obsolete SO:0000000)","termid":"SO:0000000"}


id: GO:0004040
data:
  {"annotated_genes":["SJAG_04467"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008936"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a monocarboxylic acid amide + H2O = a monocarboxylate + NH4+.","definition_xrefs":["RHEA:12020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"amidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["UM-BBD_reactionID:r0375","MetaCyc:AMIDASE-RXN","EC:3.5.1.4","UM-BBD_reactionID:r0084","UM-BBD_reactionID:r1440"],"synonyms":[{"name":"N-acetylaminohydrolase activity","type":"related"},{"name":"acetamidase activity","type":"exact"},{"name":"acylamidase activity","type":"related"},{"name":"acylamide amidohydrolase activity","type":"related"},{"name":"acylase activity","type":"related"},{"name":"amidohydrolase activity","type":"related"},{"name":"fatty acylamidase activity","type":"related"}],"termid":"GO:0004040","terms_by_termid":{"GO:0008936":null}}


id: PBO:0017742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase","termid":"PBO:0017742"}


id: MONDO:0010959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Van den Ende-Gupta syndrome is a very rare syndrome characterized by blepharophimosis, arachnodactyly, joint contractures, and characteristic dysmorphic features.","definition_xrefs":["Orphanet:2460"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van den Ende-Gupta syndrome","secondary_identifiers":["MEDGEN:322127","SCTID:719845008","icd11.foundation:1740735985","GARD:3382","UMLS:C1833136","DOID:0111699","MESH:C535909","OMIM:600920"],"synonyms":[{"name":"Marden Walker like syndrome","type":"related"},{"name":"Marden Walker like syndrome without psychomotor retardation","type":"related"},{"name":"Marden-Walker-like syndrome","type":"exact"},{"name":"Marden-Walker-like syndrome without psychomotor retardation","type":"related"},{"name":"VAN DEN Ende-Gupta syndrome","type":"related"},{"name":"VDEGS","type":"exact"},{"name":"Van den Ende Gupta syndrome","type":"related"},{"name":"blepharophimosis, arachnodactyly, and congenital contractures","type":"related"},{"name":"van den Ende-Gupta syndrome","type":"exact"}],"termid":"MONDO:0010959","xrefs":{"Monarch":{"xref_id":"0010959"}}}


id: MONDO:0009959
data:
  {"annotated_genes":["SJAG_03324"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86655],"is_not":false,"summary":null,"term":"MONDO:0009959"}]},"cv_name":"mondo","definition":"A genetic disorder characterized by abnormalities in the breakdown of phytanic acid. It results in accumulation of phytanic acid in the blood, brain and other tissues. Signs and symptoms include retinitis pigmentosa which may lead to blindness, hearing problems and deafness, hypotonia, ataxia, nystagmus, facial deformities, and mental and growth retardation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX12 defect","termid":"MONDO:0100266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03324":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0019053","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"peroxisome biogenesis disorder type 3B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15226","OMIM:266510","UMLS:C3550693","MEDGEN:763607","DOID:0081241"],"synonyms":[{"name":"PBD3B","type":"related"},{"name":"infantile phytanic acid storage disease","type":"exact"},{"name":"peroxisome biogenesis disorder 3B","type":"exact"},{"name":"peroxisome biogenesis disorder type 3B","type":"exact"}],"termid":"MONDO:0009959","terms_by_termid":{"MONDO:0009959":null},"xrefs":{"Monarch":{"xref_id":"0009959"}}}


id: GO:0034091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the association between sister chromatids of a replicated chromosome is maintained.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid cohesion","termid":"GO:0007063"},{"relation_name":"regulates","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of maintenance of sister chromatid cohesion","termid":"GO:0034091"}


id: PBO:0091951
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human protein phosphatase B' delta","termid":"PBO:0091951"}


id: PBO:0058676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6804","termid":"PBO:0058676"}


id: PBO:0082307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartic protease; hyperglycosylated member of the yapsin family of proteases, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor; involved in nutrient limitation-induced cleavage of the extracellular inhibitory domain of signaling mucin Msb2p, resulting in activation of the filamentous growth MAPK pathway; involved with other yapsins in the cell wall integrity response; role in KEX2-independent processing of the alpha factor precursor","termid":"PBO:0082307"}


id: GO:1902388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes a ceramide 1-phosphate from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:23863933","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"},{"relation_name":"is_a","term_name":"ceramide transfer activity","termid":"GO:0120017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0120013","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ceramide 1-phosphate transfer activity","secondary_identifiers":["Reactome:R-HSA-5339535"],"synonyms":[{"name":"ceramide 1-phosphate carrier activity","type":"exact"},{"name":"ceramide 1-phosphate transporter activity","type":"broad"},{"name":"intermembrane ceramide 1-phosphate transfer activity","type":"narrow"}],"termid":"GO:1902388"}


id: FYPO:0006389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the meiotic spindle pole body (SPB) moves rapidly back and forth within the nuclear envelope to a normal (i.e. indistinguishable from wild type) extent during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:17632059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic spindle pole body oscillation during prophase I","synonyms":[{"name":"normal meiotic SPB oscillation during prophase I","type":"exact"},{"name":"normal meiotic spindle pole body movement during prophase I","type":"exact"},{"name":"normal spindle pole body oscillation during prophase I","type":"exact"}],"termid":"FYPO:0006389"}


id: GO:0080131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a hydroxyjasmonate + 3'-phosphoadenosine-5'-phosphosulfate = a hydroxyjasmonate sulfate + adenosine-3',5'-diphosphate.","definition_xrefs":["PMID:12637544","EC:2.8.2.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"hydroxyjasmonate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXN-10451"],"synonyms":[{"name":"11-OHJA sulfotransferase activity","type":"narrow"},{"name":"11-hydroxyjasmonate sulfotransferase activity","type":"narrow"},{"name":"11-hydroxyjasmonic acid sulfotransferase activity","type":"narrow"},{"name":"12-OHJA sulfotransferase activity","type":"narrow"},{"name":"12-hydroxyjasmonate sulfotransferase activity","type":"narrow"},{"name":"12-hydroxyjasmonic acid sulfotransferase activity","type":"narrow"},{"name":"OHJA sulfotransferase activity","type":"exact"},{"name":"hydroxyjasmonic acid sulfotransferase activity","type":"exact"}],"termid":"GO:0080131"}


id: GO:0098883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the controlled breakdown of synapse. After it starts the process is continuous until the synapse has disappeared.","definition_xrefs":["PMID:18083105","PMID:22632716","PMID:29844190","GOC:dos","PMID:12062020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"},{"relation_name":"is_a","term_name":"cell junction disassembly","termid":"GO:0150146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synapse pruning","synonyms":[{"name":"synapse clearance","type":"exact"},{"name":"synapse disassembly","type":"exact"},{"name":"synapse elimination","type":"exact"},{"name":"synapse removal","type":"exact"}],"termid":"GO:0098883"}


id: FYPO:0001372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex of a spore is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex","termid":"FYPO:0001373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to medial cortex in spores","synonyms":[{"name":"abnormal protein localisation to medial cortex in spores","type":"exact"},{"name":"abnormal protein localization to medial ring in spores","type":"exact"}],"termid":"FYPO:0001372"}


id: PATO:0001750
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A paedomorphic growth quality which is due to a delayed onset.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paedomorphic growth","termid":"PATO:0001749"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postdisplaced growth","termid":"PATO:0001750"}


id: PBO:0072455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 19","termid":"PBO:0072455"}


id: PBO:0108931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 18, RPL3 N3-histidine","termid":"PBO:0108931"}


id: FYPO:0009042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of sorbitol than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to sorbitol","synonyms":[{"name":"resistance to sorbitol during mitotic cell cycle","type":"related"},{"name":"resistance to sorbitol during vegetative growth","type":"exact"},{"name":"resistant to sorbitol","type":"exact"}],"termid":"FYPO:0009042"}


id: GO:1901256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage colony-stimulating factor production.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"macrophage colony-stimulating factor production","termid":"GO:0036301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage colony-stimulating factor production","synonyms":[{"name":"regulation of M-CSF production","type":"exact"}],"termid":"GO:1901256"}


id: FYPO:0003157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to the growing cell tip, but then remains there for a longer or shorter time than normal.","definition_xrefs":["PMID:24146635","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal maintenance of protein location at cell tip during vegetative growth","termid":"FYPO:0005464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal maintenance of protein location at growing cell tip","synonyms":[{"name":"abnormal maintenance of protein localization at growing cell tip","type":"exact"},{"name":"abnormal maintenance of protein location at growing cell end","type":"exact"},{"name":"abnormal maintenance of protein location at growing cell tip during mitotic cell cycle","type":"related"},{"name":"abnormal maintenance of protein location at growing cell tip during vegetative growth","type":"exact"},{"name":"unstable protein localisation to growing cell tip","type":"exact"},{"name":"unstable protein localization to growing cell tip","type":"exact"}],"termid":"FYPO:0003157"}


id: GO:1901488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of transcription factor catabolism that results in positive regulation of the SREBP signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:vw","PMID:22833559"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process (obsolete GO:1901488)","synonyms":[{"name":"positive regulation of SREBP signaling pathway by inhibition of SREBP degradation","type":"narrow"},{"name":"positive regulation of SREBP signaling pathway by negative regulation of SREBP degradation","type":"narrow"},{"name":"positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolism","type":"exact"},{"name":"positive regulation of SREBP-mediated signaling pathway by negative regulation of transcription factor catabolic process","type":"exact"},{"name":"positive regulation of SREBP-mediated signalling pathway by negative regulation of transcription factor catabolic process","type":"exact"}],"termid":"GO:1901488"}


id: GO:0032177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Two separate septin rings that are formed from the septin collar at the time of cytokinesis in cells that divide by budding. These two rings are thought to delineate a special compartment in which factors involved in cytokinesis are concentrated.","definition_xrefs":["GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud neck septin structure","termid":"GO:0000399"},{"relation_name":"is_a","term_name":"cleavage apparatus septin structure","termid":"GO:0032161"},{"relation_name":"is_a","term_name":"split septin rings","termid":"GO:0032176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cellular bud neck split septin rings","termid":"GO:0032177"}


id: GO:1901961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isobutanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","PMID:22224870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"isobutanol metabolic process","termid":"GO:1901960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"isobutanol biosynthetic process","synonyms":[{"name":"isobutanol anabolism","type":"exact"},{"name":"isobutanol biosynthesis","type":"exact"},{"name":"isobutanol formation","type":"exact"},{"name":"isobutanol synthesis","type":"exact"}],"termid":"GO:1901961"}


id: PBO:0064705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 41","termid":"PBO:0064705"}


id: FYPO:0002456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is curved along the long axis, and contains one or more abnormal septa. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"},{"relation_name":"is_a","term_name":"viable curved vegetative cell","termid":"FYPO:0002112"},{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"viable curved vegetative cell with abnormal septum","synonyms":[{"name":"curved viable cell with abnormal septum","type":"exact"},{"name":"viable curved abnormally septated vegetative cell","type":"exact"},{"name":"viable curved cell with abnormal septum during vegetative growth","type":"exact"},{"name":"viable curved vegetative cell with abnormal septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002456"}


id: PBO:0065043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 2","termid":"PBO:0065043"}


id: PBO:0076965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 2","termid":"PBO:0076965"}


id: PBO:0060339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VC","termid":"PBO:0060339"}


id: PBO:0114410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific microprotein","termid":"PBO:0114410"}


id: MONDO:0002662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete plague (obsolete MONDO:0002662)","termid":"MONDO:0002662","xrefs":{"Monarch":{"xref_id":"0002662"}}}


id: FYPO:0003680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing epirubicin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on epirubicin","synonyms":[{"name":"normal cell population growth in presence of epirubicin","type":"exact"},{"name":"normal cell population growth on 4'-epidoxorubicin","type":"exact"},{"name":"normal cell population growth on epirubicin","type":"exact"},{"name":"normal cellular response to epirubicin","type":"related"},{"name":"normal vegetative cell population growth on epirubicin","type":"exact"}],"termid":"FYPO:0003680"}


id: PBO:0056178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAFA antisense RNA 1","termid":"PBO:0056178"}


id: MONDO:0008835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma, short stature, and elevated IgA","secondary_identifiers":["MESH:C565934","OMIM:208600","MEDGEN:395313","UMLS:C1859647"],"synonyms":[{"name":"asthma, short stature, and elevated IgA","type":"exact"}],"termid":"MONDO:0008835","xrefs":{"Monarch":{"xref_id":"0008835"}}}


id: PBO:0065693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine 5'-phosphatase pseudogene 2","termid":"PBO:0065693"}


id: PBO:0001374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cka1","termid":"PBO:0001374"}


id: GO:0071640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of macrophage inflammatory protein 1 alpha.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"macrophage inflammatory protein-1 alpha production","termid":"GO:0071608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage inflammatory protein 1 alpha production","synonyms":[{"name":"regulation of CCL3 production","type":"exact"},{"name":"regulation of MIP-1a production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071640"}


id: PBO:0053922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1219","termid":"PBO:0053922"}


id: MOD:02038
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-histidine residue with one methyl group.","definition_xrefs":["DeltaMass:215","OMSSA:77","Unimod:34#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated histidine","termid":"MOD:00661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-histidine","synonyms":[{"name":"MOD_RES Methylhistidine","type":"exact"},{"name":"Me1His","type":"exact"},{"name":"Methyl","type":"related"},{"name":"methylh","type":"exact"}],"termid":"MOD:02038"}


id: PBO:0116860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome-releasing factor 2, mitochondrial Gfm2/Mef2","termid":"PBO:0116860"}


id: GO:0060987
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A macromolecular complex that contains a tube of lipid surrounded by a protein coat.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid complex","termid":"GO:0032994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"lipid tube","termid":"GO:0060987"}


id: PBO:0079020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 3-1","termid":"PBO:0079020"}


id: PBO:0045243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C22","termid":"PBO:0045243"}


id: PBO:0044881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND6A divergent transcript","termid":"PBO:0044881"}


id: MONDO:0013368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mammary-digital-nail syndrome is a syndromic limb malformation characterized by congenital onychodystrophy/anonychia, brachydactyly of the fifth finger, digitalization of the thumbs, with absence or hypoplasia of the distal phalanges of the hands and feet in association with juvenile hypertrophy of the breast with gigantomastia in peripubertal females.","definition_xrefs":["Orphanet:238744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"mammary-digital-nail syndrome","secondary_identifiers":["SCTID:718679004","OMIM:613689","UMLS:C3150946","GARD:17180","MEDGEN:462296"],"synonyms":[{"name":"MDN syndrome","type":"exact"},{"name":"MDNS","type":"related"},{"name":"mammary-digital-nail syndrome","type":"exact"},{"name":"onycho-digito-mammary syndrome","type":"exact"}],"termid":"MONDO:0013368","xrefs":{"Monarch":{"xref_id":"0013368"}}}


id: PBO:0027617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_gamma-tubulin_complex_localization_to_mitotic_spindle_pole_body_following_normal_mitosis","termid":"PBO:0027617"}


id: GO:0005952
data:
  {"annotated_genes":["SJAG_04312","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71333,73751],"is_not":false,"summary":null,"term":"GO:0005952"}]},"cv_name":"cellular_component","definition":"An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer.","definition_xrefs":["PMID:18178622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cAMP-dependent protein kinase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"3',5' cAMP-dependent protein kinase complex","type":"exact"},{"name":"3',5'-cAMP-dependent protein kinase complex","type":"exact"},{"name":"PKA","type":"related"},{"name":"adenosine 3',5'-cyclophosphate-dependent protein kinase complex","type":"exact"},{"name":"cyclic AMP-dependent protein kinase complex","type":"exact"}],"termid":"GO:0005952","terms_by_termid":{"GO:0005952":null}}


id: FYPO:0004780
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is decreased, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"decreased protein localization to plasma membrane during vegetative growth","termid":"FYPO:0008198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to plasma membrane, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"decreased protein localisation to plasma membrane, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization in plasma membrane, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to plasma membrane, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to plasma membrane, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0004780"}


id: PR:O42897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10758:SF2","OMA:SCHPO02558","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.01","secondary_identifiers":["UniProtKB:O42897"],"synonyms":[{"name":"Spom972h-PSMD3","type":"exact"}],"termid":"PR:O42897"}


id: PR:P79071
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10715:SF0","OMA:SCHPO04682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.18","secondary_identifiers":["UniProtKB:P79071"],"synonyms":[{"name":"Spom972h-RPL6","type":"exact"}],"termid":"PR:P79071"}


id: GO:0070350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of white fat cell proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fat cell proliferation","termid":"GO:0070344"},{"relation_name":"regulates","term_name":"white fat cell proliferation","termid":"GO:0070343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of white fat cell proliferation","synonyms":[{"name":"regulation of white adipocyte proliferation","type":"exact"},{"name":"regulation of white adipose cell proliferation","type":"exact"}],"termid":"GO:0070350"}


id: PBO:0064382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 4","termid":"PBO:0064382"}


id: PBO:0090745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPBC28E12.04 ortholog, syntenic position","termid":"PBO:0090745"}


id: PBO:0039188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase interacting protein 1","termid":"PBO:0039188"}


id: GO:1904492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Ac-Asp-Glu.","definition_xrefs":["GOC:BHF","GO_REF:0000067","GOC:hal","GOC:TermGenie","PMID:24863754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"oligopeptide binding","termid":"GO:1900750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Ac-Asp-Glu binding","termid":"GO:1904492"}


id: PBO:0065309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 29, pseudogene","termid":"PBO:0065309"}


id: GO:0032813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the tumor necrosis factor receptor superfamily.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tumor necrosis factor receptor superfamily binding","synonyms":[{"name":"TNF receptor superfamily binding","type":"exact"}],"termid":"GO:0032813"}


id: MOD:00881
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 465 megerd with 199. Remap to MOD:00552 DiMethyl-CH2D.","definition_xrefs":["PubMed:9252331","Unimod:465"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00881 N-reductive amination-D (obsolete MOD:00881)","termid":"MOD:00881"}


id: PBO:0050296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1","termid":"PBO:0050296"}


id: GO:0021912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results the commitment of a cell to become a motor neuron in the ventral spinal cord.","definition_xrefs":["GOC:dph","PMID:11262869","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification (obsolete GO:0021912)","termid":"GO:0021912"}


id: PBO:0066688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin 3","termid":"PBO:0066688"}


id: GO:0052308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that involves recognition of a pathogen-associated molecular pattern, and by which an organism modulates the frequency, rate or extent of the innate immune response, the first line of defense against infection, of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction (obsolete GO:0052308)","synonyms":[{"name":"pathogen-associated molecular pattern dependent modulation by organism of innate immunity in other organism during symbiotic interaction","type":"related"},{"name":"pathogen-associated molecular pattern dependent modulation by organism of innate immunity in other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0052308"}


id: MONDO:0007877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal adductor paralysis","secondary_identifiers":["UMLS:C0396060","OMIM:150270","MEDGEN:140759","MESH:C562861"],"synonyms":[{"name":"LAP","type":"exact"},{"name":"laryngeal adductor paralysis","type":"exact"},{"name":"vocal cord dysfunction, adductor type","type":"related"}],"termid":"MONDO:0007877","xrefs":{"Monarch":{"xref_id":"0007877"}}}


id: GO:0170021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a soluble compound has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:36828965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor activity","termid":"GO:0008527"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857","GO:0038023"],"is_obsolete":false,"name":"ionotropic taste receptor activity","termid":"GO:0170021"}


id: PBO:0040950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 21","termid":"PBO:0040950"}


id: MONDO:0007295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A childhood-onset epilepsy syndrome that is characterized by onset of seizures between 3 and 14 years (peak 8-9 years) that usually resolve by age 13 years, but can occasionally occur up to age 18 years of age. Both sexes are affected. Antecedent, birth and neonatal history is normal. A history of febrile seizure (in 5-15%) may be seen. A history of Panayiotopoulos syndrome may be present in a very small number of cases. Neurological exam and head size is normal. Development and cognition prior to onset of seizures is normal. During the course of the active epilepsy, behavioral and neuropsychological deficits may be found, particularly in language and executive functioning. These deficits improve when seizures remit.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"excluded_subClassOf","term_name":"Landau-Kleffner syndrome","termid":"MONDO:0009509"},{"relation_name":"is_a","term_name":"childhood electroclinical syndrome","termid":"MONDO:0000414"},{"relation_name":"is_a","term_name":"familial partial epilepsy","termid":"MONDO:0017704"},{"relation_name":"is_a","term_name":"childhood-onset self-limited focal epilepsy syndrome","termid":"MONDO:0800502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"self-limited epilepsy with centrotemporal spikes","secondary_identifiers":["DOID:3329","SCTID:44145005","UMLS:C0376532","Orphanet:1945","GARD:10287","MEDGEN:138210","OMIM:117100","ICD9:345.80","icd11.foundation:1046279423","NCIT:C116538"],"synonyms":[{"name":"BCECTS","type":"exact"},{"name":"BECRS","type":"exact"},{"name":"BECTS","type":"exact"},{"name":"BRE","type":"exact"},{"name":"Rolandic epilepsy","type":"exact"},{"name":"benign Rolandic epilepsy","type":"exact"},{"name":"benign Rolandic epilepsy (BRE)","type":"exact"},{"name":"benign Rolandic epilepsy of childhood (BREC)","type":"exact"},{"name":"benign childhood epilepsy with centrotemporal spike","type":"exact"},{"name":"benign childhood epilepsy with centrotemporal spikes","type":"exact"},{"name":"benign epilepsy of childhood with centrotemporal spikes","type":"exact"},{"name":"benign epilepsy of childhood with centrotemporal spikes (BECCT)","type":"related"},{"name":"benign epilepsy with centro-temporal spikes (BECTS)","type":"related"},{"name":"benign epilepsy with centrotemporal spikes","type":"exact"},{"name":"benign familial epilepsy of childhood with rolandic spikes","type":"exact"},{"name":"centralopathic epilepsy","type":"exact"},{"name":"centrotemporal epilepsy","type":"exact"},{"name":"centrotemporal epilepsy, isolated cases","type":"exact"},{"name":"childhood epilepsy with centrotemporal spikes","type":"exact"},{"name":"sylvan seizures","type":"exact"},{"name":"temporal-central focal epilepsy","type":"exact"}],"termid":"MONDO:0007295","xrefs":{"Monarch":{"xref_id":"0007295"}}}


id: GO:0019790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-like hydrolase activity (obsolete GO:0019790)","synonyms":[{"name":"ubiquitin-like hydrolase activity","type":"exact"}],"termid":"GO:0019790"}


id: PBO:0004961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-dehydropantoate 2-reductase (predicted)","termid":"PBO:0004961"}


id: PBO:0108515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 family co-repressor, Clr6 and Rpd3L histone deacetylase subunit Pst3","termid":"PBO:0108515"}


id: PR:P78761
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- qcr2 gene.","definition_xrefs":["UniProtKB:P78761","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.10","synonyms":[{"name":"Spom972h-qcr2","type":"exact"},{"name":"complex III subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"core protein II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome-c reductase complex core protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78761"}


id: GO:0033939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-D-(1->2)-(4-O-methyl)glucuronosyl links in the main chain of hardwood xylans.","definition_xrefs":["EC:3.2.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"xylan alpha-1,2-glucuronosidase activity","secondary_identifiers":["MetaCyc:3.2.1.131-RXN"],"synonyms":[{"name":"1,2-alpha-glucuronidase activity","type":"related"},{"name":"alpha-(1->2)-glucuronidase activity","type":"related"},{"name":"xylan alpha-D-1,2-(4-O-methyl)glucuronohydrolase activity","type":"related"}],"termid":"GO:0033939"}


id: PBO:0068784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 21, pseudogene","termid":"PBO:0068784"}


id: PATO:0001747
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation exposure quality inhering in an organ by virtue of the multiplication of an equivalent dose to that organ multiplied by the tissue weighting factor for that organ.","definition_xrefs":["arpansa:arpansa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation exposure","termid":"PATO:0001744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation effective dose","termid":"PATO:0001747"}


id: GO:1901149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to salicylic acid.","definition_xrefs":["GOC:TermGenie","PMID:22699612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"salicylic acid binding","synonyms":[{"name":"salicylic acid receptor","type":"narrow"}],"termid":"GO:1901149"}


id: GO:0009052
data:
  {"annotated_genes":["SJAG_04263","SJAG_00070","SJAG_03174","SJAG_03934","SJAG_00501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73453,74087,74878,104669,108739],"is_not":false,"summary":null,"term":"GO:0009052"}]},"cv_name":"biological_process","definition":"The branch of the pentose-phosphate shunt which does not involve oxidation reactions. It comprises a series of sugar phosphate interconversions, starting with ribulose 5-P and producing fructose 6-P and glyceraldehyde 3-P.","definition_xrefs":["ISBN:0198506732","MetaCyc:NONOXIPENT-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"part_of","term_name":"pentose-phosphate shunt","termid":"GO:0006098"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00501":null,"SJAG_03174":null,"SJAG_03934":null,"SJAG_04263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pentose-phosphate shunt, non-oxidative branch","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pentose phosphate pathway, non-oxidative branch","type":"exact"},{"name":"pentose phosphate shunt, non-oxidative branch","type":"exact"},{"name":"pentose-phosphate pathway, non-oxidative branch","type":"exact"}],"termid":"GO:0009052","terms_by_termid":{"GO:0009052":null}}


id: GO:0035541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of disassembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of SNARE complex disassembly","termid":"GO:0035495"},{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex disassembly","termid":"GO:0043242"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"SNARE complex disassembly","termid":"GO:0035494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of SNARE complex disassembly","termid":"GO:0035541"}


id: GO:0045690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of antipodal cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of antipodal cell differentiation","termid":"GO:0045688"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"antipodal cell differentiation","termid":"GO:0009557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antipodal cell differentiation","synonyms":[{"name":"activation of antipodal cell differentiation","type":"narrow"},{"name":"stimulation of antipodal cell differentiation","type":"narrow"},{"name":"up regulation of antipodal cell differentiation","type":"exact"},{"name":"up-regulation of antipodal cell differentiation","type":"exact"},{"name":"upregulation of antipodal cell differentiation","type":"exact"}],"termid":"GO:0045690"}


id: PBO:0058001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3925","termid":"PBO:0058001"}


id: PBO:0034810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human MYH1 and MYH2 and MYH3 and MYH4and MYH6 and MYH7 and MYH7B and MYH8 and MYH9 and MYH10 and MYH11 and MYH13 MYH14 and MYH15 ortholog","termid":"PBO:0034810"}


id: PBO:0001378
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lesch-Nyhan syndrome and Kelley-Seegmiller syndrome","termid":"PBO:0001378"}


id: PBO:0087193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA splicing factor; required for ATP-independent portion of 2nd catalytic step of spliceosomal RNA splicing; interacts with Prp18p; contains zinc knuckle domain","termid":"PBO:0087193"}


id: GO:0102932
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + (-)-medicarpin + NADPH = (+)-vestitol + NADP.","definition_xrefs":["GOC:pz","EC:1.3.1.-"],"gene_count":0,"genotype_count":0,"name":"obsolete pterocarpan reductase activity (obsolete GO:0102932)","termid":"GO:0102932"}


id: GO:0090166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the breakdown of a Golgi apparatus that contributes to Golgi inheritance.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi organization","termid":"GO:0007030"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"},{"relation_name":"part_of","term_name":"Golgi inheritance","termid":"GO:0048313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Golgi disassembly","synonyms":[{"name":"Golgi apparatus disassembly","type":"exact"}],"termid":"GO:0090166"}


id: GO:0009440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyanate, NCO-, the anion of cyanic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"cyanate metabolic process","termid":"GO:0009439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cyanate catabolic process","synonyms":[{"name":"cyanate breakdown","type":"exact"},{"name":"cyanate catabolism","type":"exact"},{"name":"cyanate degradation","type":"exact"}],"termid":"GO:0009440"}


id: GO:0046824
data:
  {"annotated_genes":["SJAG_01805","SJAG_02592","SJAG_04464","SJAG_03453","SJAG_04312","SJAG_01245","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102167,111322,94148,100761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[91190,102699,94710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"positively_regulates","term_name":"nucleocytoplasmic transport","termid":"GO:0006913"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0006913"],"is_obsolete":false,"name":"positive regulation of nucleocytoplasmic transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of nucleocytoplasmic transport","type":"narrow"},{"name":"stimulation of nucleocytoplasmic transport","type":"narrow"},{"name":"up regulation of nucleocytoplasmic transport","type":"exact"},{"name":"up-regulation of nucleocytoplasmic transport","type":"exact"},{"name":"upregulation of nucleocytoplasmic transport","type":"exact"}],"termid":"GO:0046824","terms_by_termid":{"GO:0042307":null,"GO:0046827":null}}


id: GO:0060216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continuously provide erythroid, myeloid and lymphoid lineages throughout adulthood.","definition_xrefs":["GOC:dph","PMID:15617691","PMID:15378083","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"definitive hemopoiesis","synonyms":[{"name":"definitive haematopoiesis","type":"related"},{"name":"definitive haemopoiesis","type":"exact"},{"name":"definitive hematopoiesis","type":"exact"}],"termid":"GO:0060216"}


id: PR:O42963
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup44 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup44 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.15","synonyms":[{"name":"Spom972h-nup44","type":"exact"},{"name":"nuclear pore protein nup44 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42963"}


id: GO:0047377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-(3,4-diacetoxybut-1-ynyl)-2,2'-bithiophene + H2O = 5-(3-hydroxy-4-acetoxybut-1-ynyl)-2,2'-bithiophene + acetate + H+.","definition_xrefs":["EC:3.1.1.66","RHEA:16313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0019213","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"5-(3,4-diacetoxybut-1-ynyl)-2,2'-bithiophene deacetylase activity","secondary_identifiers":["MetaCyc:3.1.1.66-RXN","KEGG_REACTION:R04525"],"synonyms":[{"name":"3,4-diacetoxybutinylbithiophene:4-acetate esterase activity","type":"related"},{"name":"5-(3,4-diacetoxybut-1-ynyl)-2,2'-bithiophene acetylhydrolase activity","type":"related"},{"name":"diacetoxybutynylbithiophene acetate esterase activity","type":"related"}],"termid":"GO:0047377"}


id: PR:O94582
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.09","synonyms":[{"name":"Spom972h-trp3","type":"exact"},{"name":"anthranilate synthase component I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94582"}


id: FYPO:0003423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mitochondrial RNA measured in a cell is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level in mitochondrion","termid":"FYPO:0004958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitochondrial RNA level","synonyms":[{"name":"decreased RNA level in mitochondrion","type":"exact"},{"name":"decreased mitochondrial RNA accumulation","type":"related"},{"name":"decreased mitochondrial RNA level during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial RNA level during vegetative growth","type":"exact"},{"name":"decreased mitochondrial transcript level","type":"exact"},{"name":"reduced mitochondrial RNA level","type":"exact"}],"termid":"FYPO:0003423"}


id: PBO:0029822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_vegetative_cell_with_abnormal_cell_shape","termid":"PBO:0029822"}


id: GO:0062208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a pattern recognition receptor signaling pathway.","definition_xrefs":["PMID:30610168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"positively_regulates","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"}


id: PBO:0073070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDCBP2 antisense RNA 1","termid":"PBO:0073070"}


id: PBO:0091556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein, similar to cell surface molecules","termid":"PBO:0091556"}


id: MONDO:0016631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hemorrhagic disorder due to a platelet anomaly which develops after birth.","gene_count":0,"genotype_count":0,"name":"obsolete hemorrhagic disorder due to an acquired platelet anomaly (obsolete MONDO:0016631)","secondary_identifiers":["Orphanet:248347"],"synonyms":[{"name":"rare bleeding disorder due to an acquired platelet anomaly","type":"exact"},{"name":"rare bleeding disorder due to an acquired thrombopathy and/or thrombocytopenia","type":"exact"},{"name":"rare coagulopathy due to an acquired platelet anomaly","type":"exact"},{"name":"rare coagulopathy due to an acquired thrombopathy and/or thrombocytopenia","type":"exact"},{"name":"rare hemorrhagic disorder due to an acquired thrombopathy and/or thrombocytopenia","type":"exact"}],"termid":"MONDO:0016631","xrefs":{"Monarch":{"xref_id":"0016631"}}}


id: PBO:0002269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp90 chaperone","termid":"PBO:0002269"}


id: PBO:0054698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2107","termid":"PBO:0054698"}


id: GO:1990295
data:
  {"annotated_genes":["SJAG_00930","SJAG_03073","SJAG_02336","SJAG_01297","SJAG_02695","SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103856,104207,108562],"is_not":false,"summary":null,"term":"GO:1990295"},{"annotations":[97303,101746],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905759"},{"annotations":[91723],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"}]},"cv_name":"cellular_component","definition":"A cytoskeletal part that consists of an array of microtubules and associated molecules that forms at the end of anaphase, and in which microtubules are nucleated from an equatorial microtubule organizing center.","definition_xrefs":["PMID:9601091","PMID:11792817","PMID:17072892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton","termid":"GO:0015630"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00930":null,"SJAG_01297":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_02695":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"post-anaphase microtubule array","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PAA","type":"exact"},{"name":"post-anaphase array","type":"exact"}],"termid":"GO:1990295","terms_by_termid":{"GO:1905759":null,"GO:1905760":null,"GO:1990295":null}}


id: GO:1900228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single-species biofilm formation in or on host organism.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation","termid":"GO:1900190"},{"relation_name":"regulates","term_name":"single-species biofilm formation in or on host organism","termid":"GO:0044407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of single-species biofilm formation in or on host organism","termid":"GO:1900228"}


id: PBO:0041607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase activity and apoptosis inhibitor 1","termid":"PBO:0041607"}


id: GO:0070220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sulfur oxidation process that proceeds via the reaction catalyzed by sulfur dioxygenase, and requires the presence of oxygen.","definition_xrefs":["MetaCyc:SULFUROX-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxidation","termid":"GO:0019417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"aerobic sulfur oxidation","synonyms":[{"name":"aerobic sulphur oxidation","type":"exact"}],"termid":"GO:0070220"}


id: PBO:0012044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocitrate synthase","termid":"PBO:0012044"}


id: GO:0070962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed killing of a bacterium by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of bacterium","termid":"GO:0070950"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070961"},{"relation_name":"is_a","term_name":"positive regulation of defense response to bacterium","termid":"GO:1900426"},{"relation_name":"positively_regulates","term_name":"neutrophil-mediated killing of bacterium","termid":"GO:0070944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil mediated killing of bacterium","synonyms":[{"name":"activation of neutrophil mediated killing of bacterium","type":"narrow"},{"name":"stimulation of neutrophil mediated killing of bacterium","type":"narrow"},{"name":"up regulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"up-regulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"upregulation of neutrophil mediated killing of bacterium","type":"exact"}],"termid":"GO:0070962"}


id: GO:0002065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a columnar/cuboidal epithelial cell. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"}


id: GO:0045602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of endothelial cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of endothelial cell differentiation","termid":"GO:0045601"},{"relation_name":"negatively_regulates","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell differentiation","synonyms":[{"name":"down regulation of endothelial cell differentiation","type":"exact"},{"name":"down-regulation of endothelial cell differentiation","type":"exact"},{"name":"downregulation of endothelial cell differentiation","type":"exact"},{"name":"inhibition of endothelial cell differentiation","type":"narrow"}],"termid":"GO:0045602"}


id: GO:0046583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a cation or cations from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transporter activity","termid":"GO:0008324"},{"relation_name":"is_a","term_name":"efflux transmembrane transporter activity","termid":"GO:0015562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"monoatomic cation efflux transmembrane transporter activity","synonyms":[{"name":"cation efflux permease activity","type":"exact"},{"name":"cation efflux transmembrane transporter activity","type":"broad"}],"termid":"GO:0046583"}


id: PBO:0046448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epididymal peptidase inhibitor","termid":"PBO:0046448"}


id: PBO:0057974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689f","termid":"PBO:0057974"}


id: PATO:0001267
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated brown","synonyms":[{"name":"bright brown","type":"related"}],"termid":"PATO:0001267"}


id: GO:0035989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a tendon over time, from its formation to the mature structure. A tendon is a fibrous, strong, connective tissue that connects muscle to bone or integument and is capable of withstanding tension. Tendons and muscles work together to exert a pulling force.","definition_xrefs":["UBERON:0000043","PMID:21412429","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tendon development","synonyms":[{"name":"sinew development","type":"related"}],"termid":"GO:0035989"}


id: MONDO:0005226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute basophilic leukemia (obsolete MONDO:0005226)","termid":"MONDO:0005226","xrefs":{"Monarch":{"xref_id":"0005226"}}}


id: GO:0140360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cyclic-GMP-AMP from one side of a membrane to the other.","definition_xrefs":["PMID:31126740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transmembrane transporter activity","termid":"GO:0000295"},{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transporter activity","termid":"GO:0001409"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"cyclic-GMP-AMP transmembrane transporter activity","termid":"GO:0140360"}


id: PBO:0000218
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by PBF transcription complex","termid":"PBO:0000218"}


id: GO:0039636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of cell wall biogenesis in the host organism. Cell wall biogenesis includes the biosynthesis of constituent macromolecules, and the assembly and arrangement of these constituent parts.","definition_xrefs":["GOC:bf","GOC:bm","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cell wall biogenesis","synonyms":[{"name":"suppression by virus of host cell wall biogenesis","type":"narrow"}],"termid":"GO:0039636"}


id: MONDO:0010260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, congenital, lower limb, X-linked","secondary_identifiers":["MEDGEN:339477","OMIM:300158","UMLS:C1846273","MESH:C564574"],"synonyms":[{"name":"ACLLX","type":"exact"},{"name":"arthrogryposis, X-linked, type V","type":"related"},{"name":"arthrogryposis, X-linked, type V, formerly","type":"related"},{"name":"arthrogryposis, congenital, LOWER limb, X-linked","type":"related"}],"termid":"MONDO:0010260","xrefs":{"Monarch":{"xref_id":"0010260"}}}


id: GO:0006838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete allantoin/allantoate transport (obsolete GO:0006838)","synonyms":[{"name":"allantoin/allantoate transport","type":"exact"}],"termid":"GO:0006838"}


id: PBO:0056623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MED4 antisense RNA 1","termid":"PBO:0056623"}


id: MONDO:0000083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Griscelli syndrome (obsolete MONDO:0000083)","termid":"MONDO:0000083","xrefs":{"Monarch":{"xref_id":"0000083"}}}


id: GO:0061640
data:
  {"annotated_genes":["SJAG_04077","SJAG_03596","SJAG_01215","SJAG_01732","SJAG_01889","SJAG_00807","SJAG_04551","SJAG_01787","SJAG_04468","SJAG_01805","SJAG_04412","SJAG_03045","SJAG_00279","SJAG_04776","SJAG_00514","SJAG_00442","SJAG_01456","SJAG_04781","SJAG_03374","SJAG_03936","SJAG_00256","SJAG_00938","SJAG_03309","SJAG_04597","SJAG_03581","SJAG_02232","SJAG_05285","SJAG_03915","SJAG_01894","SJAG_03048","SJAG_01188","SJAG_02807","SJAG_01143","SJAG_04470","SJAG_04621","SJAG_00228","SJAG_03379","SJAG_04001","SJAG_02392","SJAG_03688","SJAG_03564","SJAG_01464","SJAG_04982","SJAG_04498","SJAG_01769","SJAG_03123","SJAG_01386","SJAG_03631","SJAG_02864","SJAG_03342","SJAG_04703","SJAG_02215","SJAG_02222","SJAG_03376","SJAG_04887","SJAG_01277","SJAG_04943","SJAG_00082","SJAG_05179","SJAG_00268","SJAG_02592","SJAG_01453","SJAG_03692","SJAG_03025","SJAG_01665","SJAG_04690","SJAG_03703","SJAG_04358","SJAG_01863","SJAG_01837","SJAG_02831","SJAG_01114","SJAG_04375","SJAG_03088","SJAG_03704","SJAG_04930","SJAG_02657","SJAG_05290","SJAG_00663","SJAG_00700","SJAG_02431","SJAG_00845","SJAG_03264","SJAG_02700","SJAG_04666","SJAG_03887","SJAG_02380","SJAG_02838","SJAG_02916","SJAG_01943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75030,75273,76249],"is_not":false,"summary":null,"term":"GO:0061640"},{"annotations":[111110],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000915"},{"annotations":[89669,98611,108442,98352],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[105468],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044837"},{"annotations":[100087,91634],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061796"},{"annotations":[118764,75289,72899,102879,112612,88601,119470,92883,75940,97974,102736,76703,112177,92933,118180,99223,98049,95623,98245],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903475"},{"annotations":[77783],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[98355,118181,88602,102737,95624,97975,101021,101249,99224,112613],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902404"},{"annotations":[103573,80224,98614,106521,101280,113075,100438,119276,98222,104235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000281"},{"annotations":[88614,96655,119859,109165],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902408"},{"annotations":[106444,102958,104981,108925,113383,80778,99612],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140278"},{"annotations":[102681],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[104012],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[102460,107410,93185,99991],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902413"},{"annotations":[102686],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[90340,94749],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[94750,94919,113670,87876,110832],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903473"},{"annotations":[91109,119860,104017,111075],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[78274,90210,106701,92760,113671,105501,118193,94145,115774,107362],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[92761,87877,94753],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[106428,114689],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031671"},{"annotations":[118942,92668,111112],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904498"},{"annotations":[94151,119711],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"},{"annotations":[101261,107455,118994,92185,77401,117821,103806,90156,109522],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902412"},{"annotations":[101706,111684,88194],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"},{"annotations":[116122],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"A cytokinesis that involves the function of a set of proteins that are part of the microfilament or microtubule 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id: FYPO:0000957
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on methyl methanesulfonate","synonyms":[{"name":"normal cell population growth in presence of methyl methanesulfonate","type":"exact"},{"name":"normal cell population growth on MMS","type":"exact"},{"name":"normal cell population growth on methyl methanesulfonate","type":"exact"},{"name":"normal cellular response to methyl methanesulfonate","type":"related"},{"name":"normal growth on methyl methanesulphonate","type":"exact"},{"name":"normal vegetative cell population growth on methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0000957"}


id: GO:0050396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S,9R)-6-hydroxy-3-oxo-alpha-ionol + NAD+ = (6S)-6-hydroxy-3-oxo-alpha-ionone + H+ + NADH.","definition_xrefs":["EC:1.1.1.221","RHEA:22804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"vomifoliol 4'-dehydrogenase activity","secondary_identifiers":["MetaCyc:VOMIFOLIOL-4-DEHYDROGENASE-RXN","KEGG_REACTION:R04412"],"synonyms":[{"name":"vomifoliol:NAD+ 4'-oxidoreductase activity","type":"related"}],"termid":"GO:0050396"}


id: GO:0060155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a platelet dense granule. A platelet dense granule is an electron-dense granule occurring in blood platelets that stores and secretes adenosine nucleotides and serotonin. They contain a highly condensed core consisting of serotonin, histamine, calcium, magnesium, ATP, ADP, pyrophosphate and membrane lysosomal proteins.","definition_xrefs":["GOC:dph","PMID:11487378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet dense granule organization","synonyms":[{"name":"bull's eye body organization and biogenesis","type":"related"},{"name":"platelet dense body organization and biogenesis","type":"related"},{"name":"platelet dense granule organisation","type":"exact"},{"name":"platelet dense granule organization and biogenesis","type":"related"}],"termid":"GO:0060155"}


id: GO:1901007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving (S)-scoulerine.","definition_xrefs":["UniPathway:UPA00319","GOC:TermGenie","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-scoulerine metabolic process (obsolete GO:1901007)","synonyms":[{"name":"(S)-scoulerine metabolism","type":"exact"}],"termid":"GO:1901007"}


id: PBO:0079616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L1 (pseudogene)","termid":"PBO:0079616"}


id: FYPO:0003315
data:
  {"alleles_by_uniquename":{"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119500],"is_not":false,"summary":null,"term":"FYPO:0003315"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable actin cables.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cables","termid":"FYPO:0002435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04703":null},"genotype_count":1,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0004803","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"actin cables absent from cell","references_by_uniquename":{"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_04703"],"single_locus_genotype_uniquenames":["for3delta"],"synonyms":[{"name":"absent actin cables","type":"exact"},{"name":"actin cables absent from cell during mitotic cell cycle","type":"related"},{"name":"actin cables absent from cell during vegetative growth","type":"exact"},{"name":"formin-nucleated actin cables absent from cell","type":"exact"}],"termid":"FYPO:0003315","terms_by_termid":{"FYPO:0003315":null}}


id: MONDO:0012685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major affective disorder 5","secondary_identifiers":["MEDGEN:372672","MESH:C567074","UMLS:C1970944","OMIM:611535"],"synonyms":[{"name":"MAFD5","type":"exact"},{"name":"MAJOR affective disorder 5","type":"related"},{"name":"bipolar affective disorder","type":"related"},{"name":"major affective disorder 5","type":"exact"}],"termid":"MONDO:0012685","xrefs":{"Monarch":{"xref_id":"0012685"}}}


id: FYPO:0000133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one nucleus, is longer than normal, and has a greater length:diameter ratio than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"elongated multinucleate cell","termid":"FYPO:0003342"},{"relation_name":"output_of","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000005","FYPO:0000032","FYPO:0001320"],"is_obsolete":false,"name":"elongated multinucleate vegetative cell","synonyms":[{"name":"elongated multinucleate cell during vegetative growth","type":"exact"},{"name":"elongated multinucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"long multinucleate vegetative cell","type":"exact"}],"termid":"FYPO:0000133"}


id: MONDO:0016220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital temporomandibular joint ankylosis is a rare maxillofacial disorder characterized by significant reduction in mouth opening (i.e. from a few millimeters to a few centimeters) in the absence of acquired factors (e.g. trauma, infection) contributing to the ankylosis. It is associated with variable degrees of facial dysmorphism (i.e. lateral deviation of the mandible and chin, lower facial asymmetry, retrognathia, micrognathia, dental malocclusion) and patients typically present with feeding and breathing difficulties. Developmental delay, hypotonia, seizures, and additional dysmorphic features (e.g. pectus excavatum, low-set ears, hypoplastic alae nasi) have also been reported.","definition_xrefs":["Orphanet:210576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ankylosis","termid":"MONDO:0002257"},{"relation_name":"is_a","term_name":"temporomandibular joint disorder","termid":"MONDO:0005473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital temporomandibular joint ankylosis","secondary_identifiers":["GARD:20450","MEDGEN:1638477","UMLS:C4706319","SCTID:763215008"],"synonyms":[{"name":"congenital trismus","type":"exact"}],"termid":"MONDO:0016220","xrefs":{"Monarch":{"xref_id":"0016220"}}}


id: PBO:0088681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ protein, splicing factor Spf31","termid":"PBO:0088681"}


id: PBO:0061826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 16 Y-linked","termid":"PBO:0061826"}


id: MONDO:0014816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split-foot malformation-mesoaxial polydactyly syndrome","secondary_identifiers":["UMLS:C5567487","GARD:17889","OMIM:616890","MEDGEN:1798910","Orphanet:488232"],"synonyms":[{"name":"SFMMP","type":"exact"},{"name":"split-foot malformation with mesoaxial polydactyly","type":"exact"},{"name":"split-foot malformation-mesoaxial polydactyly-nail abnormalities-sensorineural hearing loss syndrome","type":"exact"}],"termid":"MONDO:0014816","xrefs":{"Monarch":{"xref_id":"0014816"}}}


id: PBO:0065519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 1","termid":"PBO:0065519"}


id: GO:0016721
data:
  {"annotated_genes":["SJAG_01734","SJAG_03303","SJAG_00668","SJAG_04788"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77517,74669,58082,65294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004784"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a superoxide radical (O2- or O2.-) acts as a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_01734":null,"SJAG_03303":null,"SJAG_04788":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on superoxide radicals as acceptor","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["EC:1.15.-.-"],"termid":"GO:0016721","terms_by_termid":{"GO:0004784":null}}


id: GO:0005934
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The end of a cellular bud distal to the site of attachment to the mother cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"part_of","term_name":"cellular bud","termid":"GO:0005933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cellular bud tip","termid":"GO:0005934"}


id: PBO:0081797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 726 pseudogene 1","termid":"PBO:0081797"}


id: PATO:0001265
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of blue hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blue","termid":"PATO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated blue","synonyms":[{"name":"bright blue","type":"related"}],"termid":"PATO:0001265"}


id: PBO:0114108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, WD repeat subunit Swd22","termid":"PBO:0114108"}


id: FYPO:0007521
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119588,119603,119609,119614,119617],"is_not":false,"summary":null,"term":"FYPO:0007521"}]},"cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of tacrolimus and magnesium chloride than normal.","definition_xrefs":["PomBase:mah","PMID:19625445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":5,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to tacrolimus and magnesium chloride","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610"],"single_locus_genotype_uniquenames":["Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck2delta","pmk1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"hypersensitive to tacrolimus and magnesium chloride","type":"exact"},{"name":"resistance to FK506 and magnesium chloride","type":"exact"},{"name":"resistance to magnesium chloride and FK506","type":"exact"},{"name":"resistance to magnesium chloride and tacrolimus","type":"exact"},{"name":"resistance to tacrolimus and MgCl2","type":"exact"},{"name":"resistance to tacrolimus and magnesium chloride during mitotic cell cycle","type":"related"},{"name":"resistance to tacrolimus and magnesium chloride during vegetative growth","type":"exact"},{"name":"resistant to tacrolimus and magnesium chloride","type":"exact"},{"name":"viable in the presence of FK506 and chloride","type":"exact"},{"name":"vic","type":"related"}],"termid":"FYPO:0007521","terms_by_termid":{"FYPO:0007521":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: FYPO:0000105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cyclosporin A. Cells stop growing (and may die) at a concentration of cyclosporin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to cyclosporin A","synonyms":[{"name":"hypersensitive to cyclosporin A","type":"exact"},{"name":"sensitive to cyclosporin A during mitotic cell cycle","type":"related"},{"name":"sensitive to cyclosporin A during vegetative growth","type":"exact"},{"name":"sensitive to cyclosporine","type":"exact"}],"termid":"FYPO:0000105"}


id: PBO:0087039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L19A; rpl19a and rpl19b single null mutations result in slow growth, while the double null mutation is lethal; homologous to mammalian ribosomal protein L19, no bacterial homolog; RPL19A has a paralog, RPL19B, that arose from the whole genome duplication","termid":"PBO:0087039"}


id: PBO:0039859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 23 pseudogene 1","termid":"PBO:0039859"}


id: MONDO:0017035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary interstitial lung disease in childhood and adulthood associated with a systemic disease (obsolete MONDO:0017035)","secondary_identifiers":["Orphanet:264949"],"synonyms":[{"name":"secondary ILD in childhood and adulthood associated with a systemic disease","type":"exact"}],"termid":"MONDO:0017035","xrefs":{"Monarch":{"xref_id":"0017035"}}}


id: MONDO:1010708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eclampsia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eclampsia, non-human animal","termid":"MONDO:1010103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eclampsia, dog","secondary_identifiers":["OMIA:001331-9615"],"termid":"MONDO:1010708","xrefs":{"Monarch":{"xref_id":"1010708"}}}


id: MONDO:0006019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endemic, infectious, nonvenereal disease in humans that presents mainly in children younger than 15 years. The disease occurs primarily in warm, humid, tropical areas of Africa, Asia, South America, and Oceania, among poor rural populations where conditions of overcrowding and poor sanitation prevail. Infection with Treponema pertenue, a subspecies of Treponema pallidum, causes the disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syphilis","termid":"MONDO:0005976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yaws","secondary_identifiers":["ICD10CM:A66","ICD9:102","NORD:1872","SCTID:70647001","UMLS:C0043388","icd11.foundation:840525023","MESH:D015001","ICD9:102.9","ICD9:102.7","MEDGEN:12186","NCIT:C41353","DOID:10371","GARD:7913"],"synonyms":[{"name":"Bouba","type":"exact"},{"name":"Treponema pallidum subsp. pertenue caused disease or disorder","type":"exact"},{"name":"Treponema pallidum subsp. pertenue disease or disorder","type":"exact"},{"name":"Treponema pallidum subsp. pertenue infectious disease","type":"exact"},{"name":"Treponema pertenue infection","type":"related"},{"name":"endemic treponematoses","type":"related"},{"name":"frambesia","type":"exact"},{"name":"frambesia tropica","type":"exact"},{"name":"frambosie","type":"exact"},{"name":"polypapilloma tropicum","type":"exact"},{"name":"thymosis","type":"exact"}],"termid":"MONDO:0006019","xrefs":{"Monarch":{"xref_id":"0006019"}}}


id: GO:1903083
data:
  {"annotated_genes":["SJAG_02336","SJAG_02761","SJAG_01297","SJAG_04126","SJAG_04259","SJAG_03327","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75745,59692,78345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034501"},{"annotations":[118967,104218,100707,108576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a condensed chromosome.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","GOC:kmv","PMID:12707312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03327":null,"SJAG_03540":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to condensed chromosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in condensed chromosome","type":"exact"},{"name":"protein localisation to condensed chromosome","type":"exact"},{"name":"protein localization in condensed chromosome","type":"exact"}],"termid":"GO:1903083","terms_by_termid":{"GO:0034501":null,"GO:0140210":null}}


id: GO:2000399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of thymocyte aggregation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte cell-cell adhesion","termid":"GO:1903038"},{"relation_name":"is_a","term_name":"regulation of thymocyte aggregation","termid":"GO:2000398"},{"relation_name":"negatively_regulates","term_name":"thymocyte aggregation","termid":"GO:0071594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of thymocyte aggregation","synonyms":[{"name":"negative regulation of T cell precursor aggregation","type":"exact"},{"name":"negative regulation of immature T cell aggregation","type":"related"},{"name":"negative regulation of immature T-cell aggregation","type":"related"},{"name":"negative regulation of immature T-lymphocyte aggregation","type":"exact"},{"name":"negative regulation of thymic lymphocyte aggregation","type":"exact"}],"termid":"GO:2000399"}


id: GO:1904057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sensory perception of pain.","definition_xrefs":["PMID:17167094","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nervous system process","termid":"GO:0031645"},{"relation_name":"is_a","term_name":"regulation of sensory perception of pain","termid":"GO:0051930"},{"relation_name":"negatively_regulates","term_name":"sensory perception of pain","termid":"GO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sensory perception of pain","synonyms":[{"name":"down regulation of nociception","type":"exact"},{"name":"down regulation of perception of physiological pain","type":"narrow"},{"name":"down regulation of sensory perception of pain","type":"exact"},{"name":"down-regulation of nociception","type":"exact"},{"name":"down-regulation of perception of physiological pain","type":"narrow"},{"name":"down-regulation of sensory perception of pain","type":"exact"},{"name":"downregulation of nociception","type":"exact"},{"name":"downregulation of perception of physiological pain","type":"narrow"},{"name":"downregulation of sensory perception of pain","type":"exact"},{"name":"inhibition of nociception","type":"narrow"},{"name":"inhibition of perception of physiological pain","type":"narrow"},{"name":"inhibition of sensory perception of pain","type":"narrow"},{"name":"negative regulation of nociception","type":"exact"},{"name":"negative regulation of perception of physiological pain","type":"narrow"}],"termid":"GO:1904057"}


id: GO:0008118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + CMP-N-acetyl-beta-neuraminate = an N-acetyl-alpha-neuraminyl-(2->3)-beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + CMP + H+.","definition_xrefs":["PMID:10206952","RHEA:52316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"N-acetyllactosaminide alpha-2,3-sialyltransferase activity","secondary_identifiers":["EC:2.4.3.6","MetaCyc:2.4.99.6-RXN"],"synonyms":[{"name":"N-acetyllactosaminide alpha-2,3-sialyltransferase","type":"exact"},{"name":"alpha2->3 sialyltransferase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate-beta-galactosyl(1->4)acetylglucosaminide alpha2->3-sialyltransferase activity","type":"related"},{"name":"neolactotetraosylceramide alpha-2,3-sialyltransferase activity","type":"narrow"}],"termid":"GO:0008118"}


id: GO:0140946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl4-[histone H3] + 2 S-adenosyl-L-methionine = 2 H+ + N6,N6-dimethyl-L-lysyl4-[histone H3] + 2 S-adenosyl-L-homocysteine. This reaction is the successive addition of two methyl groups to the unmethylated lysine residue at position 4 of histone H3, producing histone H3K4me2.","definition_xrefs":["RHEA:64448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K4 methyltransferase activity","termid":"GO:0042800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0008276","GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"histone H3K4 dimethyltransferase activity","secondary_identifiers":["EC:2.1.1.370"],"synonyms":[{"name":"histone H3-K4 dimethylation","type":"broad"},{"name":"histone H3K4 dimethylase activity","type":"exact"},{"name":"histone H3K4 dimethylation","type":"broad"},{"name":"histone lysine N-dimethyltransferase activity (H3-K4 specific)","type":"exact"}],"termid":"GO:0140946"}


id: GO:0042175
data:
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id: GO:0009731
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id: PBO:0070062
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id: PBO:0034618
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id: FYPO:0005465
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id: GO:0009230
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id: PBO:0053735
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id: MONDO:1012589
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id: GO:0018331
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id: GO:0019365
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  {"annotated_genes":["SJAG_01500","SJAG_03298","SJAG_04467","SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80285,99666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[89361,109923,90992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"}]},"cv_name":"biological_process","definition":"Any process that generates a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base, from derivatives of them without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleotide biosynthetic process","termid":"GO:0019363"},{"relation_name":"is_a","term_name":"nucleotide salvage","termid":"GO:0043173"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01500":null,"SJAG_03298":null,"SJAG_04467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyridine nucleotide salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyridine nucleotide cycling","type":"exact"}],"termid":"GO:0019365","terms_by_termid":{"GO:0019358":null,"GO:0034355":null}}


id: GO:0050278
data:
  {"annotated_genes":["SJAG_03759"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74505],"is_not":false,"summary":null,"term":"GO:0050278"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: sedoheptulose 1,7-bisphosphate + H2O = sedoheptulose 7-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.37","MetaCyc:SEDOHEPTULOSE-BISPHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03759":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"sedoheptulose-bisphosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:17461"],"synonyms":[{"name":"SBPase activity","type":"related"},{"name":"sedoheptulose 1,7-bisphosphatase activity","type":"related"},{"name":"sedoheptulose 1,7-diphosphatase activity","type":"related"},{"name":"sedoheptulose 1,7-diphosphate phosphatase activity","type":"related"},{"name":"sedoheptulose bisphosphatase activity","type":"related"},{"name":"sedoheptulose diphosphatase activity","type":"related"},{"name":"sedoheptulose-1,7-bisphosphatase activity","type":"related"},{"name":"sedoheptulose-1,7-bisphosphate 1-phosphohydrolase activity","type":"related"}],"termid":"GO:0050278","terms_by_termid":{"GO:0050278":null}}


id: PBO:0027859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_mitotic_S_phase_during_cellular_response_to_DNA_damage","termid":"PBO:0027859"}


id: SO:0001677
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A core promoter region of RNA polymerase III type 1 promoters.","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_1","termid":"SO:0000617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate_element","synonyms":[{"name":"IE","type":"exact"},{"name":"intermediate element","type":"related"}],"termid":"SO:0001677"}


id: PR:O74834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uracil-DNA glycosylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04380","PANTHER:PTHR11264:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil-DNA glycosylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.06","secondary_identifiers":["UniProtKB:O74834"],"synonyms":[{"name":"Spom972h-UNG","type":"exact"},{"name":"UDG (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74834"}


id: PBO:0061218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 9","termid":"PBO:0061218"}


id: GO:0150098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling that mediates the transfer of information from a glial cell to a neuron. This signaling has been shown to be mediated by various molecules, depending on which glial cells release them, and in which tissues the signaling occurs, e.g. microglial cell-derived nerve growth factor (NGF) in the retina, or microglial cell-derived superoxide ions in the cerebellum.","definition_xrefs":["GOC:bc","PMID:27788368","PMID:16547515","PMID:14980203","PMID:16144764","PMID:18685038","GOC:aruk","PMID:9459440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"glial cell-neuron signaling","synonyms":[{"name":"glia-neuron signaling","type":"exact"},{"name":"glia-neuron signalling","type":"exact"},{"name":"glia-neurone signaling","type":"exact"},{"name":"glia-neurone signalling","type":"exact"},{"name":"glial cell- neuron signalling","type":"exact"},{"name":"glial cell-neurone signalling","type":"exact"},{"name":"glial cell-neurone singaling","type":"exact"}],"termid":"GO:0150098"}


id: MONDO:0001890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tooth erosion, non-bacterial that involves the dental pulp.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth erosion, non-bacterial","termid":"MONDO:0002325"},{"relation_name":"is_a","term_name":"dental pulp disorder","termid":"MONDO:0003394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulp erosion","secondary_identifiers":["DOID:14140","ICD9:521.33","UMLS:C1456163","MEDGEN:1843466"],"synonyms":[{"name":"dental pulp tooth erosion, non-bacterial","type":"exact"},{"name":"tooth erosion, non-bacterial of dental pulp","type":"exact"}],"termid":"MONDO:0001890","xrefs":{"Monarch":{"xref_id":"0001890"}}}


id: GO:0060488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lung bud bifurcates perpendicular to the plane of the previous bud.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dichotomous subdivision of terminal units involved in lung branching","termid":"GO:0060448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis","synonyms":[{"name":"perpendicular dichotomous subdivision of terminal units involved in lung branching morphogenesis","type":"exact"}],"termid":"GO:0060488"}


id: GO:0090230
data:
  {"annotated_genes":["SJAG_04638","SJAG_01837","SJAG_03048","SJAG_00718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[102690,116975,89991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of centromere complex assembly, the aggregation, arrangement and bonding together of proteins and centromeric DNA molecules to form a centromeric protein-DNA complex.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"centromere complex assembly","termid":"GO:0034508"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of centromere complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere licensing","type":"related"}],"termid":"GO:0090230","terms_by_termid":{"GO:1905560":null,"GO:1905561":null}}


id: PBO:0091770
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"The Bioneer strain does not appear contain a deletion","termid":"PBO:0091770"}


id: PBO:0082666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the core factor (CF) rDNA transcription factor complex; CF is required for transcription of 35S rRNA genes by RNA polymerase I and is composed of Rrn6p, Rrn7p, and Rrn11p","termid":"PBO:0082666"}


id: PBO:0040948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 19","termid":"PBO:0040948"}


id: PBO:0039828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase 2","termid":"PBO:0039828"}


id: MONDO:0010533
data:
  {"annotated_genes":["SJAG_04882","SJAG_03811"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87367,87368],"is_not":false,"summary":null,"term":"MONDO:0010533"}]},"cv_name":"mondo","definition":"Lethal ataxia with deafness and optic atrophy (also known as Arts syndrome) is characterized by intellectual deficit, early-onset hypotonia, ataxia, delayed motor development, hearing impairment and loss of vision due to optic atrophy.","definition_xrefs":["Orphanet:1187"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked cerebellar ataxia","termid":"MONDO:0016612"},{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03811":null,"SJAG_04882":null},"genotype_count":0,"is_obsolete":false,"name":"Arts syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:301835","ICD9:277.2","MEDGEN:163205","MESH:C535388","UMLS:C0796028","DOID:0050647","GARD:8756","SCTID:702441001"],"synonyms":[{"name":"ARTS","type":"exact"},{"name":"Arts","type":"exact"},{"name":"Arts syndrome","type":"exact"},{"name":"Arts syndrome, X-linked recessive","type":"exact"},{"name":"MRXS18","type":"exact"},{"name":"MRXSARTS","type":"exact"},{"name":"X-linked fatal ataxia with deafness and loss of vision","type":"related"},{"name":"ataxia, fatal X-linked, with deafness and loss of vision","type":"related"},{"name":"fatal X-linked ataxia with deafness and loss of vision","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 18","type":"related"},{"name":"intellectual disability, X-linked, syndromic, Arts type","type":"related"},{"name":"lethal ataxia with deafness and optic atrophy","type":"exact"},{"name":"lethal ataxia-deafness-optic atrophy","type":"related"},{"name":"mental retardation, X-linked, syndromic 18","type":"related"},{"name":"mental retardation, X-linked, syndromic, Arts type","type":"related"},{"name":"syndromic X-linked intellectual disability 18","type":"exact"},{"name":"syndromic X-linked intellectual disability Arts type","type":"exact"},{"name":"syndromic X-linked mental retardation 18","type":"exact"},{"name":"syndromic X-linked mental retardation Arts type","type":"exact"}],"termid":"MONDO:0010533","terms_by_termid":{"MONDO:0010533":null},"xrefs":{"Monarch":{"xref_id":"0010533"}}}


id: GO:0018219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of peptidyl-cysteine to form peptidyl-S-acetyl-L-cysteine.","definition_xrefs":["RESID:AA0056"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine S-acetylation (obsolete GO:0018219)","termid":"GO:0018219"}


id: GO:0016092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of prenols, isoprenoids of general formula (H-CH2-C(CH3)=CH-CH2-)n-OH, any primary monohydroxy alcohol whose carbon skeleton consists of two or more isoprenoid residues linked head to tail.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid catabolic process","termid":"GO:0008300"},{"relation_name":"is_a","term_name":"prenol metabolic process","termid":"GO:0016090"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"prenol catabolic process","synonyms":[{"name":"prenol breakdown","type":"exact"},{"name":"prenol catabolism","type":"exact"},{"name":"prenol degradation","type":"exact"}],"termid":"GO:0016092"}


id: PBO:0077764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 divergent transcript","termid":"PBO:0077764"}


id: GO:0001537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: n 3'-phosphoadenylyl sulfate + dermatan = n adenosine 3',5'-bisphosphate + dermatan 4'-sulfate + n H+.","definition_xrefs":["RHEA:48052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatan sulfotransferase activity","termid":"GO:0120534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"dermatan 4-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2022063","Reactome:R-HSA-6786034","EC:2.8.2.35","Reactome:R-HSA-3636919"],"synonyms":[{"name":"N-acetylgalactosamine 4-O-sulfotransferase activity","type":"related"},{"name":"N-acetylgalactosamine 4-O-sulphotransferase activity","type":"related"}],"termid":"GO:0001537"}


id: PBO:0108987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 11","termid":"PBO:0108987"}


id: MONDO:1010467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent ductus arteriosus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patent ductus arteriosus, non-human animal","termid":"MONDO:1010017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent ductus arteriosus, horse","secondary_identifiers":["OMIA:000779-9796"],"termid":"MONDO:1010467","xrefs":{"Monarch":{"xref_id":"1010467"}}}


id: FYPO:0006021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:28366642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","termid":"FYPO:0007536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein distribution along RNA polymerase II-transcribed genes","synonyms":[{"name":"normal protein distribution across RNA polymerase II-transcribed genes","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-regulated genes","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during mitotic cell cycle","type":"related"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during vegetative growth","type":"exact"},{"name":"normal protein distribution in chromatin along RNA polymerase II-transcribed genes","type":"exact"},{"name":"normal protein localization to chromatin along RNA polymerase II-transcribed genes","type":"exact"}],"termid":"FYPO:0006021"}


id: PBO:0071917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 2","termid":"PBO:0071917"}


id: PBO:0003785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNP-associated protein Lsm3 (predicted)","termid":"PBO:0003785"}


id: PBO:0072649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 1","termid":"PBO:0072649"}


id: PBO:0073266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 10","termid":"PBO:0073266"}


id: MONDO:0859081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome Xq13 duplication syndrome","secondary_identifiers":["MEDGEN:1809227","OMIM:301069","UMLS:C5677057"],"termid":"MONDO:0859081","xrefs":{"Monarch":{"xref_id":"0859081"}}}


id: PBO:0081667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 587 pseudogene 1","termid":"PBO:0081667"}


id: MONDO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myeloproliferative neoplasm (obsolete MONDO:0002248)","termid":"MONDO:0002248","xrefs":{"Monarch":{"xref_id":"0002248"}}}


id: PBO:0030697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutathione-disulfide_reductase_activity","termid":"PBO:0030697"}


id: PBO:0080550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 9","termid":"PBO:0080550"}


id: MONDO:0850123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm of peripheral nervous system","termid":"MONDO:0056804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autonomic nervous system benign neoplasm","secondary_identifiers":["DOID:0080321"],"termid":"MONDO:0850123","xrefs":{"Monarch":{"xref_id":"0850123"}}}


id: PBO:0011966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal calcium sensor related protein Ncs1","termid":"PBO:0011966"}


id: MONDO:0020080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete histiocytic and dendritic cell tumor (obsolete MONDO:0020080)","termid":"MONDO:0020080","xrefs":{"Monarch":{"xref_id":"0020080"}}}


id: PBO:0060736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 1","termid":"PBO:0060736"}


id: PBO:0084073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase with similarity to translation release factors; together with binding partner Dom34p, facilitates ribosomal subunit dissociation and peptidyl-tRNA release when translation is stalled, particularly in 3' UTRs; genetically implicated in mRNA no-go decay; HBS1 has a paralog, SKI7, that arose from the whole genome duplication","termid":"PBO:0084073"}


id: PBO:0077294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 37","termid":"PBO:0077294"}


id: MONDO:0000592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental disorder of mental health that categorizes specific learning disabilities and developmental disorders affecting coordination.","definition_xrefs":["DOID:0060038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental disorder of mental health","termid":"MONDO:0005503"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific developmental disorder","secondary_identifiers":["UMLS:C0037785","ICD9:315.8","SCTID:10720004","MEDGEN:508157"],"synonyms":[{"name":"specific delays in development","type":"related"},{"name":"specific developmental disorder","type":"exact"}],"termid":"MONDO:0000592","xrefs":{"Monarch":{"xref_id":"0000592"}}}


id: PBO:0076271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYBU antisense RNA 1","termid":"PBO:0076271"}


id: MOD:00984
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dichloro-L-tyrosine","termid":"MOD:01045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(35)Cl labeled 3',5'-dichlorotyrosine","termid":"MOD:00984"}


id: PBO:0038439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase pseudogene 1","termid":"PBO:0038439"}


id: MONDO:0012599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"excluded_subClassOf","term_name":"essential hypertension, genetic","termid":"MONDO:0007781"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertension, essential, susceptibility to, 8","secondary_identifiers":["MEDGEN:369687","UMLS:C1970244","OMIM:611014"],"synonyms":[{"name":"HYT8","type":"exact"},{"name":"hypertension, essential, susceptibility to, 8","type":"exact"}],"termid":"MONDO:0012599","xrefs":{"Monarch":{"xref_id":"0012599"}}}


id: GO:0030039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA unwinding factor (obsolete GO:0030039)","synonyms":[{"name":"DNA unwinding factor","type":"exact"}],"termid":"GO:0030039"}


id: MONDO:1011116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptorchidism that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptorchidism, non-human animal","termid":"MONDO:1010275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism, goat","secondary_identifiers":["OMIA:000243-9925"],"termid":"MONDO:1011116","xrefs":{"Monarch":{"xref_id":"1011116"}}}


id: MONDO:0018524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete intraductal papillary mucinous carcinoma of pancreas (obsolete MONDO:0018524)","termid":"MONDO:0018524","xrefs":{"Monarch":{"xref_id":"0018524"}}}


id: PBO:0058274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4651","termid":"PBO:0058274"}


id: MONDO:0020701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A1A","synonyms":[{"name":"BDA1","type":"related"},{"name":"BRACHYDACTYLY, type A1","type":"related"},{"name":"Farabee-type Brachydactyly","type":"related"}],"termid":"MONDO:0020701","xrefs":{"Monarch":{"xref_id":"0020701"}}}


id: PBO:0112998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha arrestin, substrate of calcineurin; controls nutrient-mediated intracellular sorting of permease Gap1p; interacts with AP-1 subunit Apl4p; dephosphorylation of Aly1p required for the endocytosis of Dip5p; may regulate endocytosis of plasma membrane proteins by recruiting ubiquitin ligase Rsp5p to plasma membrane targets; regulates intracellular pH; ALY1 has a paralog, ALY2, that arose from the whole genome duplication","termid":"PBO:0112998"}


id: GO:0038061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette characterized by the NIK-dependent processing and activation of NF-kappaB. Begins with activation of the NF-kappaB-inducing kinase (NIK), which in turn phosphorylates and activates IkappaB kinase alpha (IKKalpha). IKKalpha phosphorylates the NF-kappa B2 protein (p100) leading to p100 processing and release of an active NF-kappaB (p52). The non-canonical NF-kappaB signaling pathway is generally activated by ligands of the TNF receptor superfamily, including lymphotoxin beta (LTB), CD40, OX40, RANK, TWEAK and B cell-activating factor (BAFF).","definition_xrefs":["PMID:15140882","PMID:11239468","PMID:34659217","GOC:bf","GOC:mg2","GOC:signaling","GOC:vs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"non-canonical NF-kappaB signal transduction","secondary_identifiers":["Reactome:R-HSA-5676590"],"synonyms":[{"name":"NF-kappaB cascade","type":"broad"},{"name":"NIK-IKK kinase cascade","type":"exact"},{"name":"NIK-IKK signaling pathway","type":"exact"},{"name":"NIK-IKK-alpha cascade","type":"exact"},{"name":"NIK/NF-kappaB cascade","type":"exact"},{"name":"NIK/NF-kappaB signal transduction","type":"exact"},{"name":"NIK/NF-kappaB signaling","type":"exact"},{"name":"non-canonical NF-KB signaling","type":"exact"},{"name":"noncanonical NF-kappaB signaling","type":"exact"},{"name":"noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"p52-dependent NF-kappaB signaling","type":"narrow"}],"termid":"GO:0038061"}


id: MONDO:0013487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complement deficiency","termid":"MONDO:0003832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"recurrent Neisseria infections due to factor D deficiency","secondary_identifiers":["UMLS:C0398764","MEDGEN:97989","SCTID:234607008","GARD:17055","NANDO:2200788","icd11.foundation:528757185","ICD9:279.8","Orphanet:169467","OMIM:613912","MESH:C565027"],"synonyms":[{"name":"CFDD","type":"related"},{"name":"complement factor D deficiency","type":"related"},{"name":"factor D deficiency","type":"related"},{"name":"recurrent Neisseria infections due to factor D deficiency","type":"exact"}],"termid":"MONDO:0013487","xrefs":{"Monarch":{"xref_id":"0013487"}}}


id: SOFP:reported_pr_change
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reported_pr_change","termid":"SOFP:reported_pr_change"}


id: PBO:0065042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 7","termid":"PBO:0065042"}


id: FYPO:0002540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is decreased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleoplasm","termid":"FYPO:0002530"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm during cellular response to hydroxyurea","termid":"FYPO:0002537"},{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during cellular response to hydroxyurea","termid":"FYPO:0005338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleoplasm during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein localisation to nucleoplasm during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein localization to nucleoplasm during cellular response to HU","type":"exact"},{"name":"decreased protein localization to nucleoplasm during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleoplasm during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleoplasm during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002540"}


id: PBO:0057484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 602","termid":"PBO:0057484"}


id: MONDO:0002256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the cervix. Representative examples include cervicitis, endocervical polyp, and carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervix disorder","secondary_identifiers":["NCIT:C40241","UMLS:C0007867","MEDGEN:2970","SCTID:63339007","DOID:2253","MESH:D002577"],"synonyms":[{"name":"cervical disorder","type":"exact"},{"name":"disease of uterine cervix","type":"exact"},{"name":"disease or disorder of uterine cervix","type":"exact"},{"name":"disorder of uterine cervix","type":"exact"},{"name":"uterine cervix disease","type":"exact"},{"name":"uterine cervix disease or disorder","type":"exact"}],"termid":"MONDO:0002256","xrefs":{"Monarch":{"xref_id":"0002256"}}}


id: PBO:0016945
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae snR30","termid":"PBO:0016945"}


id: PBO:0110326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDOC antisense RNA 1","termid":"PBO:0110326"}


id: FYPO:0007946
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is decreased.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein ubiquitination","termid":"FYPO:0006977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein ubiquitination","termid":"FYPO:0007946"}


id: PBO:0002309
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.2.-","termid":"PBO:0002309"}


id: GO:0014860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of neurotransmitter into the synaptic cleft involved in skeletal muscle contraction. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin.","definition_xrefs":["GOC:mtg_muscle","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"part_of","term_name":"regulation of skeletal muscle contraction by neural stimulation via neuromuscular junction","termid":"GO:0014852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter secretion involved in regulation of skeletal muscle contraction","synonyms":[{"name":"neurotransmitter secretion involved in control of skeletal muscle contraction","type":"exact"}],"termid":"GO:0014860"}


id: FYPO:0002843
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the nucleoplasm is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"output_of","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to nucleoplasm","synonyms":[{"name":"ectopic protein localization to nucleoplasm","type":"exact"},{"name":"protein mislocalised to nucleoplasm","type":"exact"},{"name":"protein mislocalised to nucleoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0002843"}


id: PBO:0053881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1160","termid":"PBO:0053881"}


id: MONDO:0000066
data:
  {"annotated_genes":["SJAG_00354","SJAG_03782","SJAG_02480","SJAG_06392","SJAG_04560","SJAG_00755","SJAG_04450","SJAG_01490","SJAG_03114","SJAG_00852","SJAG_01355","SJAG_06002","SJAG_05305","SJAG_00601","SJAG_03490","SJAG_03046","SJAG_04553","SJAG_03296","SJAG_01077","SJAG_01405","SJAG_03550","SJAG_01368","SJAG_02504","SJAG_01820","SJAG_03173","SJAG_02646","SJAG_03099","SJAG_00217","SJAG_01503","SJAG_04348","SJAG_01190","SJAG_02564","SJAG_00080","SJAG_04639","SJAG_06046","SJAG_03322"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032617"},{"annotations":[86603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032630"},{"annotations":[86605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032631"},{"annotations":[86591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032609"},{"annotations":[86594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032612"},{"annotations":[87048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032909"},{"annotations":[86069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859321"},{"annotations":[86094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033639"},{"annotations":[86096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033645"},{"annotations":[86095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033649"},{"annotations":[86107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033651"},{"annotations":[86101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033653"},{"annotations":[86103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033654"},{"annotations":[86104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033655"},{"annotations":[86108,86109,86110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033656"},{"annotations":[86086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033635"},{"annotations":[86083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033636"},{"annotations":[86092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033637"},{"annotations":[86093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033638"},{"annotations":[86705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020858"},{"annotations":[86823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007415"},{"annotations":[85486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014063"},{"annotations":[85487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014064"},{"annotations":[85485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014065"},{"annotations":[85489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014066"},{"annotations":[86287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014194"},{"annotations":[86771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014356"},{"annotations":[86777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014364"},{"annotations":[87051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014496"},{"annotations":[87560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0700250"},{"annotations":[86894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859160"},{"annotations":[86930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859520"},{"annotations":[85463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014091"},{"annotations":[85849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011421"},{"annotations":[85803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012992"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn 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deficiency","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0000066","terms_by_termid":{"MONDO:0007415":null,"MONDO:0011421":null,"MONDO:0012992":null,"MONDO:0014063":null,"MONDO:0014064":null,"MONDO:0014065":null,"MONDO:0014066":null,"MONDO:0014091":null,"MONDO:0014194":null,"MONDO:0014356":null,"MONDO:0014364":null,"MONDO:0014496":null,"MONDO:0020858":null,"MONDO:0032609":null,"MONDO:0032612":null,"MONDO:0032617":null,"MONDO:0032630":null,"MONDO:0032631":null,"MONDO:0032909":null,"MONDO:0033635":null,"MONDO:0033636":null,"MONDO:0033637":null,"MONDO:0033638":null,"MONDO:0033639":null,"MONDO:0033645":null,"MONDO:0033649":null,"MONDO:0033651":null,"MONDO:0033653":null,"MONDO:0033654":null,"MONDO:0033655":null,"MONDO:0033656":null,"MONDO:0700250":null,"MONDO:0859160":null,"MONDO:0859321":null,"MONDO:0859520":null},"xrefs":{"Monarch":{"xref_id":"0000066"}}}


id: PR:O60062
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- met6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.11","synonyms":[{"name":"Spom972h-met6","type":"exact"},{"name":"homoserine O-trans-acetylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60062"}


id: FYPO:0006944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount on one or more ribosomal proteins measured in a cell is lower than normal.","definition_xrefs":["PMID:30862564","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased ribosomal protein level","synonyms":[{"name":"decreased cellular ribosomal protein level","type":"exact"},{"name":"decreased ribosomal protein level during mitotic cell cycle","type":"related"},{"name":"decreased ribosomal protein level during vegetative growth","type":"exact"},{"name":"reduced ribosomal protein level","type":"exact"}],"termid":"FYPO:0006944"}


id: GO:0141058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue of the histone H4 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:17947579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone demethylase activity","termid":"GO:0032452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0032452"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0032452"],"is_obsolete":false,"name":"histone H4 demethylase activity","termid":"GO:0141058"}


id: PBO:0047552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 10","termid":"PBO:0047552"}


id: MONDO:0001456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral retinal degeneration","termid":"MONDO:0001451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cobblestone retinal degeneration","secondary_identifiers":["SCTID:69134001","MEDGEN:509685","UMLS:C0154854","DOID:12166","ICD9:362.61"],"synonyms":[{"name":"paving stone degeneration of retina","type":"exact"},{"name":"paving stone retinal degeneration","type":"exact"}],"termid":"MONDO:0001456","xrefs":{"Monarch":{"xref_id":"0001456"}}}


id: PBO:0044211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin V","termid":"PBO:0044211"}


id: PATO:0000568
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000568 relative height value (obsolete PATO:0000568)","termid":"PATO:0000568"}


id: PBO:0013092
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. japonicus gtb1","termid":"PBO:0013092"}


id: PBO:0057942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3667","termid":"PBO:0057942"}


id: PBO:0110188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial poly(A) RNA polymerase Atp25","termid":"PBO:0110188"}


id: PBO:0068746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 1","termid":"PBO:0068746"}


id: PBO:0001070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D123 family protein","termid":"PBO:0001070"}


id: MONDO:0002297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the hair follicles, sebaceous glands, or sweat glands.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"skin appendage disorder","termid":"MONDO:0024481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermal appendage tumor","secondary_identifiers":["MEDGEN:87527","NCIT:C4463","UMLS:C0345988","SCTID:126489007","ICD9:239.2","DOID:2433"],"synonyms":[{"name":"Epidermal appendage neoplasm","type":"exact"},{"name":"Epidermal appendage tumor","type":"exact"},{"name":"Epidermal appendage tumour","type":"exact"},{"name":"adnexal neoplasm of skin","type":"exact"},{"name":"adnexal neoplasm of the skin","type":"exact"},{"name":"adnexal tumor of skin","type":"exact"},{"name":"adnexal tumor of the skin","type":"exact"},{"name":"adnexal tumour of skin","type":"exact"},{"name":"adnexal tumour of the skin","type":"exact"},{"name":"cutaneous adnexal neoplasm","type":"exact"},{"name":"cutaneous appendage neoplasm","type":"exact"},{"name":"cutaneous appendage neoplasm (disease)","type":"exact"},{"name":"cutaneous appendage tumor","type":"exact"},{"name":"cutaneous appendage tumour","type":"exact"},{"name":"neoplasm of Epidermal appendage","type":"exact"},{"name":"neoplasm of cutaneous appendage","type":"exact"},{"name":"neoplasm of skin appendage","type":"exact"},{"name":"neoplasm of skin with adnexal differentiation","type":"exact"},{"name":"neoplasm of the skin appendage","type":"exact"},{"name":"skin appendage neoplasm","type":"exact"},{"name":"skin appendage tumor","type":"exact"},{"name":"skin appendage tumour","type":"exact"},{"name":"tumor of Epidermal appendage","type":"exact"},{"name":"tumor of cutaneous appendage","type":"exact"},{"name":"tumor of skin appendage","type":"exact"},{"name":"tumor of the skin appendage","type":"exact"},{"name":"tumour of Epidermal appendage","type":"exact"},{"name":"tumour of cutaneous appendage","type":"exact"},{"name":"tumour of skin appendage","type":"exact"},{"name":"tumour of the skin appendage","type":"exact"}],"termid":"MONDO:0002297","xrefs":{"Monarch":{"xref_id":"0002297"}}}


id: GO:0033888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-deoxy-beta-D-gluc-4-enuronosyl-(1->3)-N-acetyl-D-galactosamine 6-sulfate + H2O = 4-deoxy-beta-D-gluc-4-enuronosyl-(1->3)-N-acetyl-D-galactosamine + H+ + sulfate.","definition_xrefs":["EC:3.1.6.10","RHEA:10536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"chondro-6-sulfatase activity","secondary_identifiers":["KEGG_REACTION:R03518","MetaCyc:CHONDRO-6-SULFATASE-RXN"],"synonyms":[{"name":"4-deoxy-beta-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine-6-sulfate 6-sulfohydrolase activity","type":"related"}],"termid":"GO:0033888"}


id: PBO:0061981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AT member 2 pseudogene","termid":"PBO:0061981"}


id: PBO:0052673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 41","termid":"PBO:0052673"}


id: GO:0006479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein alkylation","termid":"GO:0008213"},{"relation_name":"is_a","term_name":"macromolecule methylation","termid":"GO:0043414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein methylation","secondary_identifiers":["Reactome:R-HSA-8876725"],"synonyms":[{"name":"protein amino acid methylation","type":"exact"}],"termid":"GO:0006479"}


id: GO:0055071
data:
  {"annotated_genes":["SJAG_04867","SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73971,76175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of manganese ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"manganese ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"manganese homeostasis","type":"broad"}],"termid":"GO:0055071","terms_by_termid":{"GO:0030026":null}}


id: MONDO:0015277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine carcinoma arising from the C-cells of the thyroid gland. It is closely associated with multiple endocrine neoplasia syndromes. Approximately 10% to 20% of medullary thyroid carcinomas are familial. Patients usually present with a thyroid nodule that is painless and firm. In the majority of cases nodal involvement is present at diagnosis. Surgery is the preferred treatment for both primary lesions and recurrences. This carcinoma is generally not very sensitive to radiation and almost unresponsive to chemotherapy.","definition_xrefs":["NCIT:C3879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine carcinoma","termid":"MONDO:0002120"},{"relation_name":"is_a","term_name":"thyroid gland follicular carcinoma","termid":"MONDO:0005034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"medullary thyroid gland carcinoma","secondary_identifiers":["GARD:7004","DOID:3973","HP:0002865","MedDRA:10027101","UMLS:C0238462","icd11.foundation:578519098","SCTID:255032005","ONCOTREE:THME","Orphanet:1332","NANDO:2201054","MEDGEN:66772"],"synonyms":[{"name":"C cell carcinoma","type":"exact"},{"name":"MTC","type":"exact"},{"name":"THME","type":"related"},{"name":"carcinoma of parafollicular cell","type":"exact"},{"name":"carcinoma, C-cell, malignant","type":"exact"},{"name":"medullary carcinoma","type":"exact"},{"name":"medullary carcinoma of the thyroid","type":"exact"},{"name":"medullary carcinoma of the thyroid gland","type":"exact"},{"name":"medullary carcinoma of thyroid","type":"exact"},{"name":"medullary carcinoma of thyroid gland","type":"exact"},{"name":"medullary thyroid cancer","type":"exact"},{"name":"medullary thyroid cancer (MTC)","type":"related"},{"name":"medullary thyroid carcinoma","type":"exact"},{"name":"medullary thyroid gland carcinoma","type":"exact"},{"name":"parafollicular cell carcinoma","type":"exact"},{"name":"thyroid cancer, medullary","type":"related"},{"name":"thyroid carcinoma, medullary","type":"related"},{"name":"thyroid gland medullary cancer","type":"exact"},{"name":"thyroid gland medullary carcinoma","type":"exact"},{"name":"thyroid gland neuroendocrine carcinoma","type":"exact"},{"name":"thyroid medullary carcinoma","type":"exact"},{"name":"ultimobranchial thyroid tumor","type":"exact"},{"name":"ultimobranchial thyroid tumour","type":"exact"}],"termid":"MONDO:0015277","xrefs":{"Monarch":{"xref_id":"0015277"}}}


id: PBO:0041459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 88","termid":"PBO:0041459"}


id: MONDO:0034670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic postaxial polydactyly (obsolete MONDO:0034670)","secondary_identifiers":["Orphanet:498467"],"termid":"MONDO:0034670","xrefs":{"Monarch":{"xref_id":"0034670"}}}


id: MONDO:0002788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A craniopharyngioma composed of sheets of squamous epithelium which separate to form pseudopapillae. This variant typically lacks nuclear palisading, wet keratin, calcification, and cholesterol deposits. Clinically, endocrine deficiencies are more often associated with papillary craniopharyngioma than with the adamantinomatous type. (Adapted from WHO)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniopharyngioma","termid":"MONDO:0018907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary craniopharyngioma","secondary_identifiers":["ICDO:9352/1","MEDGEN:98125","DOID:3847","UMLS:C0431128","NCIT:C4725"],"synonyms":[{"name":"craniopharyngioma, papillary","type":"exact"},{"name":"craniopharyngioma, papillary (morphologic abnormality)","type":"exact"},{"name":"papillary Rathke pouch neoplasm","type":"exact"},{"name":"papillary Rathke's pouch neoplasm","type":"exact"},{"name":"papillary Rathke's pouch tumor","type":"exact"},{"name":"papillary Rathke's pouch tumour","type":"exact"},{"name":"papillary craniopharyngioma (morphologic abnormality)","type":"exact"},{"name":"papillary neoplasm of Rathke's pouch","type":"exact"},{"name":"papillary tumor of Rathke's pouch","type":"exact"},{"name":"papillary tumour of Rathke's pouch","type":"exact"}],"termid":"MONDO:0002788","xrefs":{"Monarch":{"xref_id":"0002788"}}}


id: GO:0030899
data:
  {"annotated_genes":["SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118185],"is_not":false,"summary":null,"term":"GO:0030899"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate. This reaction requires the presence of calcium ion (Ca2+).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"calcium-dependent ATPase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030899","terms_by_termid":{"GO:0030899":null}}


id: PBO:0073045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 3","termid":"PBO:0073045"}


id: PBO:0084153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity plasma membrane H+-biotin (vitamin H) symporter; mutation results in fatty acid auxotrophy; 12 transmembrane domain containing major facilitator subfamily member; mRNA levels negatively regulated by iron deprivation and biotin","termid":"PBO:0084153"}


id: PBO:0038529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 3, phospholipase","termid":"PBO:0038529"}


id: PR:Q9Y813
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpr2 gene.","definition_xrefs":["UniProtKB:Q9Y813","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P protein subunit rpr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.16c","synonyms":[{"name":"RNA-processing protein rpr2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpr2","type":"exact"}],"termid":"PR:Q9Y813"}


id: FYPO:0001293
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell wall biogenesis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cell wall biogenesis","synonyms":[{"name":"normal cell wall biogenesis during mitotic cell cycle","type":"related"},{"name":"normal cell wall biogenesis during vegetative growth","type":"exact"},{"name":"normal fungal-type cell wall biogenesis","type":"exact"}],"termid":"FYPO:0001293"}


id: GO:0001837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:dph","PMID:14701881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial to mesenchymal transition","secondary_identifiers":["Reactome:R-HSA-9758919"],"synonyms":[{"name":"EMT","type":"exact"},{"name":"epithelial-mesenchymal transition","type":"exact"},{"name":"mesenchymal cell differentiation from epithelial cell","type":"exact"}],"termid":"GO:0001837"}


id: PBO:0053089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 2A","termid":"PBO:0053089"}


id: GO:1900177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aflatoxin biosynthetic process.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"aflatoxin biosynthetic process","termid":"GO:0045122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of aflatoxin biosynthetic process","synonyms":[{"name":"regulation of aflatoxin anabolism","type":"exact"},{"name":"regulation of aflatoxin biosynthesis","type":"exact"},{"name":"regulation of aflatoxin formation","type":"exact"},{"name":"regulation of aflatoxin synthesis","type":"exact"}],"termid":"GO:1900177"}


id: GO:1903640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gastrin-induced gastric acid secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11123201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gastric acid secretion","termid":"GO:0060455"},{"relation_name":"is_a","term_name":"regulation of gastrin-induced gastric acid secretion","termid":"GO:1903639"},{"relation_name":"negatively_regulates","term_name":"gastrin-induced gastric acid secretion","termid":"GO:0001698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of gastrin-induced gastric acid secretion","synonyms":[{"name":"down regulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"down-regulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"downregulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"inhibition of gastrin-induced gastric acid secretion","type":"narrow"}],"termid":"GO:1903640"}


id: PBO:0051179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-69-1 (pseudogene)","termid":"PBO:0051179"}


id: MONDO:0600010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Moderate hypophosphatasia is a rare, moderate form of hypophosphatasia characterized by defective mineralization of bone and/or teeth, premature loss of teeth with intact roots, and reduced serum alkaline phosphatase (ALP) activity. Individuals can present with this form of hypophosphatasia in infancy, childhood, or adulthood.","definition_xrefs":["PMID:32973344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypophosphatasia","termid":"MONDO:0018570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005066"],"is_obsolete":false,"name":"moderate hypophosphatasia","termid":"MONDO:0600010","xrefs":{"Monarch":{"xref_id":"0600010"}}}


id: GO:0120548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol) + H2O = 1D-myo-inositol 1-phosphate + a 1,2-diacyl-sn-glycerol + H+.","definition_xrefs":["RHEA:43484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"phosphatidylinositol phospholipase C activity","termid":"GO:0120548"}


id: GO:0198738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that mediates the transfer of information from one cell to another, medaited by a wnt family protein ligand. This process includes wnt signal transduction in the receiving cell, release of wnt ligand from a secreting cell as well as any processes that actively facilitate wnt transport and presentation to receptor on the receiving cell.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-cell signaling by wnt (obsolete GO:0198738)","termid":"GO:0198738"}


id: PBO:0026938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_onset_of_meiosis_I","termid":"PBO:0026938"}


id: MOD:01954
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-selenocysteine residue to dehydroalanine.","definition_xrefs":["ChEBI:17123","PubMed:12781460","PubMed:1547888","PubMed:22031445","PubMed:1815586","PubMed:20805503","RESID:AA0181","PubMed:10220322","PubMed:7947813","PubMed:21420488","PubMed:8239649","PubMed:2914619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-selenocysteine residue","termid":"MOD:01158"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine (Sec)","synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dha","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:01954"}


id: FYECO:0000297
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium arsenite (NaAsO2) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ NaAsO2","synonyms":[{"name":"sodium arsenite added","type":"exact"}],"termid":"FYECO:0000297"}


id: GO:0002051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of mesenchymal cells to the specific cell fate of an osteoblast. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"osteoblast differentiation","termid":"GO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast fate commitment","termid":"GO:0002051"}


id: PBO:0082545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein with similarity to glucanases; may play a role in conjugation during mating based on its regulation by Ste12p","termid":"PBO:0082545"}


id: MONDO:0013441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy has material basis in compound heterozygous mutation in the TTC21B gene on chromosome 2q24.","definition_xrefs":["DOID:0110088","PMID:21258341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"asphyxiating thoracic dystrophy 4","secondary_identifiers":["GARD:15718","MEDGEN:462535","OMIM:613819","UMLS:C3151185"],"synonyms":[{"name":"ATD4","type":"exact"},{"name":"SRTD4","type":"exact"},{"name":"asphyxiating thoracic dystrophy 4","type":"exact"},{"name":"asphyxiating thoracic dystrophy type 4","type":"exact"},{"name":"short-rib thoracic dysplasia 4 with or without polydactyly","type":"exact"}],"termid":"MONDO:0013441","xrefs":{"Monarch":{"xref_id":"0013441"}}}


