# terms

id: GO:0031298
data:
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id: PBO:0043393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxymethylenebutenolidase homolog","termid":"PBO:0043393"}


id: PBO:0026727
data:
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id: PBO:0038308
data:
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id: PBO:0085363
data:
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id: PR:Q9P7T9
data:
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id: MONDO:0007541
data:
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id: GO:0051603
data:
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id: GO:1902442
data:
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id: PBO:0028895
data:
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id: GO:0042633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair; one of the collection or mass of filaments growing from the skin of an animal, and forming a covering for a part of the head or for any part or the whole of the body.","definition_xrefs":["PMID:12230507","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle","termid":"GO:0042303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hair cycle","termid":"GO:0042633"}


id: MONDO:0018418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spastic paraplegia type 66","secondary_identifiers":["GARD:21697","Orphanet:401815","UMLS:C5190590","MEDGEN:1675102"],"synonyms":[{"name":"SPG66","type":"exact"}],"termid":"MONDO:0018418","xrefs":{"Monarch":{"xref_id":"0018418"}}}


id: PBO:0013818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family protein, implicted in mitochondrial ergosterol and phospholipd homeostasis","termid":"PBO:0013818"}


id: PBO:0041867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 14","termid":"PBO:0041867"}


id: PBO:0052455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 6","termid":"PBO:0052455"}


id: PBO:0040660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 5","termid":"PBO:0040660"}


id: FYPO:0002236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more sterol esters measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular sterol ester level","synonyms":[{"name":"normal cellular sterol ester level during mitotic cell cycle","type":"related"},{"name":"normal cellular sterol ester level during vegetative growth","type":"exact"},{"name":"normal level of sterol ester in cell","type":"exact"}],"termid":"FYPO:0002236"}


id: GO:0072207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epithelium in the metanephros over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney epithelium development","termid":"GO:0072073"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric epithelium development","termid":"GO:0072207"}


id: MONDO:0019561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of lupus erythematosus characterized by deep dermal or subcutaneous nodules, most often on the head, face, or upper arms. It is generally chronic and occurs most often in women between the ages of 20 and 45.","definition_xrefs":["MESH:D015435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"panniculitis","termid":"MONDO:0006591"},{"relation_name":"is_a","term_name":"chronic cutaneous lupus erythematosus","termid":"MONDO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lupus erythematosus panniculitis","secondary_identifiers":["SCTID:15084002","NCIT:C82884","MEDGEN:14589","GARD:19133","Orphanet:90285","UMLS:C0030327"],"synonyms":[{"name":"lupus erythematosus profundus","type":"exact"},{"name":"lupus panniculitis","type":"exact"},{"name":"lupus profundus","type":"exact"}],"termid":"MONDO:0019561","xrefs":{"Monarch":{"xref_id":"0019561"}}}


id: PBO:0081917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 886, pseudogene","termid":"PBO:0081917"}


id: PBO:0045110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethylglycine dehydrogenase","termid":"PBO:0045110"}


id: PBO:0069041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 286, pseudogene","termid":"PBO:0069041"}


id: GO:0001875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a lipopolysaccharide and transmitting the signal across the cell membrane to initiate an innate immune response. Lipopolysaccharides (LPS) are major components of the outer membrane of Gram-negative bacteria, making them prime targets for recognition by the immune system.","definition_xrefs":["PMID:15379975","PMID:14609719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"lipopolysaccharide immune receptor activity","synonyms":[{"name":"LPS receptor activity","type":"exact"},{"name":"endotoxin receptor activity","type":"broad"},{"name":"lipopolysaccharide receptor activity","type":"broad"}],"termid":"GO:0001875"}


id: PBO:0069539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 809, pseudogene","termid":"PBO:0069539"}


id: GO:0016849
data:
  {"annotated_genes":["SJAG_01254","SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94569],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010856"},{"annotations":[65371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004016"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a phosphorus-oxygen bond by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01254":null,"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphorus-oxygen lyase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:4.6.-.-"],"termid":"GO:0016849","terms_by_termid":{"GO:0004016":null,"GO:0010856":null}}


id: PR:000028197
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc8 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin cdc8","synonyms":[{"name":"cdc8","type":"exact"}],"termid":"PR:000028197"}


id: GO:0019409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The metabolic process in which ammonia (NH3) is oxidized to nitrite (NO2) in the presence of oxygen; enzymatic reactions convert ammonia to hydrazine, and hydrazine to nitrite.","definition_xrefs":["MetaCyc:AMMOXID-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"},{"relation_name":"is_a","term_name":"ammonia oxidation","termid":"GO:0019329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aerobic respiration, using ammonia as electron donor","synonyms":[{"name":"aerobic ammonia oxidation to nitrite via hydrazine","type":"exact"}],"termid":"GO:0019409"}


id: GO:0045626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T-helper 1 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T-helper 1 type immune response","termid":"GO:0002826"},{"relation_name":"is_a","term_name":"negative regulation of T-helper cell differentiation","termid":"GO:0045623"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell differentiation","termid":"GO:0045625"},{"relation_name":"negatively_regulates","term_name":"T-helper 1 cell differentiation","termid":"GO:0045063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T-helper 1 cell differentiation","synonyms":[{"name":"down regulation of T-helper 1 cell differentiation","type":"exact"},{"name":"down-regulation of T-helper 1 cell differentiation","type":"exact"},{"name":"downregulation of T-helper 1 cell differentiation","type":"exact"},{"name":"inhibition of T-helper 1 cell differentiation","type":"narrow"},{"name":"negative regulation of T-helper 1 cell development","type":"related"}],"termid":"GO:0045626"}


id: PBO:0062205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily A member 2","termid":"PBO:0062205"}


id: GO:0098763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"One of the distinct periods or stages into which the mitotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitotic cell cycle phase","termid":"GO:0098763"}


id: MOD:00963
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modification from DeltaMass. OBSOLETE because redundant and identical to MOD:00462. Remap to MOD:00462.","definition_xrefs":["DeltaMass:357"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00963 Oxidation of Trp to kynurenine (obsolete MOD:00963)","termid":"MOD:00963"}


id: MOD:01290
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00465. Remap to MOD:00465.","definition_xrefs":["PubMed:12686488","PubMed:11857757","PubMed:12175151","Unimod:425","PubMed:9252331"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01290 dihydroxylated residue - site F (obsolete MOD:01290)","synonyms":[{"name":"Dioxidation","type":"related"},{"name":"dihydroxy","type":"related"}],"termid":"MOD:01290"}


id: MONDO:0000485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic voice disorder characterized by momentary periods of uncontrolled spasms of the muscles of the larynx.","direct_ancestors":[{"relation_name":"is_a","term_name":"focal dystonia","termid":"MONDO:0000477"},{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"spasmodic dystonia","secondary_identifiers":["Orphanet:93961","MEDGEN:409603","DOID:0050844","ICD9:478.79","UMLS:C1963946","SCTID:3331000119108","MESH:D055154"],"synonyms":[{"name":"abductor spasmodic dysphonia","type":"narrow"},{"name":"adductor spasmodic dysphonia","type":"narrow"},{"name":"laryngeal dyskinesia","type":"exact"},{"name":"laryngeal dystonia","type":"exact"},{"name":"mixed spasmodic dysphonia (type)","type":"related"},{"name":"spasmodic dysphonia","type":"exact"},{"name":"spastic dysphonia","type":"exact"}],"termid":"MONDO:0000485","xrefs":{"Monarch":{"xref_id":"0000485"}}}


id: PBO:0090353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine/pyridoxine/pyridoxal transmembrane transporter","termid":"PBO:0090353"}


id: FYPO:0006633
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119398,119471,119410],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001122"},{"annotations":[119847],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which cell length, i.e. the maximum distance between the cell ends, is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null,"SJAG_04332":null},"genotype_count":4,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cell length","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_04312","SJAG_04332","SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["pka1delta","atf1delta","sty1delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0006633","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYPO:0001122":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000003":null}}


id: PBO:0017825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-site clamp monopolin complex subunit Csm1/Pcs1","termid":"PBO:0017825"}


id: SO:0001363
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_aminomethyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_aminomethyl_two_thiouridine","secondary_identifiers":["RNAMOD:071"],"synonyms":[{"name":"5-aminomethyl-2-thiouridine","type":"exact"},{"name":"five aminomethyl two thiouridine","type":"exact"},{"name":"nm5s2U","type":"exact"}],"termid":"SO:0001363"}


id: GO:0032684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of fractalkine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fractalkine production","termid":"GO:0032644"},{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"negatively_regulates","term_name":"fractalkine production","termid":"GO:0032603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fractalkine production","secondary_identifiers":["GO:0050753"],"synonyms":[{"name":"down regulation of fractalkine production","type":"exact"},{"name":"down-regulation of fractalkine production","type":"exact"},{"name":"downregulation of fractalkine production","type":"exact"},{"name":"inhibition of fractalkine production","type":"narrow"},{"name":"negative regulation of CX3CL1 biosynthesis","type":"narrow"},{"name":"negative regulation of CX3CL1 production","type":"exact"},{"name":"negative regulation of fractalkine biosynthetic process","type":"narrow"}],"termid":"GO:0032684"}


id: GO:0001859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C3dg product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"complement component C3dg receptor activity","termid":"GO:0001859"}


id: GO:0034148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 5 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 5 signaling pathway","termid":"GO:0034147"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 5 signaling pathway","termid":"GO:0034146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 5 signaling pathway","synonyms":[{"name":"negative regulation of TLR5 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 5 signalling pathway","type":"exact"}],"termid":"GO:0034148"}


id: FYPO:0005741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal invertase activity","synonyms":[{"name":"abnormal beta-fructofuranosidase activity","type":"exact"}],"termid":"FYPO:0005741"}


id: MONDO:1010564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital adrenal hyperplasia that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital adrenal hyperplasia, non-human animal","termid":"MONDO:1010050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital adrenal hyperplasia, rabbit","secondary_identifiers":["OMIA:000017-9986"],"termid":"MONDO:1010564","xrefs":{"Monarch":{"xref_id":"1010564"}}}


id: GO:0016557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a peroxisome membrane is synthesized, aggregates, and bonds together.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane biogenesis","termid":"GO:0044091"},{"relation_name":"part_of","term_name":"peroxisome organization","termid":"GO:0007031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007031"],"is_obsolete":false,"name":"peroxisome membrane biogenesis","termid":"GO:0016557"}


id: PBO:0087704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; affects transcription by acting as target of activators and repressors; forms part of the tail domain of mediator","termid":"PBO:0087704"}


id: GO:1902576
data:
  {"annotated_genes":["SJAG_02162","SJAG_01068","SJAG_03048","SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[102683,109203,98097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nuclear cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","PMID:19033384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of nuclear cell cycle DNA replication","termid":"GO:0033262"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"},{"relation_name":"negatively_regulates","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01068":null,"SJAG_01210":null,"SJAG_02162":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of nuclear cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA replication during S phase","type":"related"},{"name":"down regulation of DNA replication involved in S phase","type":"exact"},{"name":"down regulation of DNA replication involved in S-phase","type":"exact"},{"name":"down regulation of nuclear cell cycle DNA replication","type":"exact"},{"name":"down-regulation of DNA replication during S phase","type":"related"},{"name":"down-regulation of DNA replication involved in S phase","type":"exact"},{"name":"down-regulation of DNA replication involved in S-phase","type":"exact"},{"name":"down-regulation of nuclear cell cycle DNA replication","type":"exact"},{"name":"downregulation of DNA replication during S phase","type":"related"},{"name":"downregulation of DNA replication involved in S phase","type":"exact"},{"name":"downregulation of DNA replication involved in S-phase","type":"exact"},{"name":"downregulation of nuclear cell cycle DNA replication","type":"exact"},{"name":"inhibition of DNA replication during S phase","type":"related"},{"name":"inhibition of DNA replication involved in S phase","type":"narrow"},{"name":"inhibition of DNA replication involved in S-phase","type":"narrow"},{"name":"inhibition of nuclear cell cycle DNA replication","type":"narrow"},{"name":"negative regulation of DNA replication during S phase","type":"related"},{"name":"negative regulation of DNA replication involved in S phase","type":"exact"},{"name":"negative regulation of DNA replication involved in S-phase","type":"exact"}],"termid":"GO:1902576","terms_by_termid":{"GO:1903464":null,"GO:1903467":null}}


id: PBO:0034128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_by_via_type_Is_bouton","termid":"PBO:0034128"}


id: MONDO:0009384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leydig cell hypoplasia in which the cause of the disease is a mutation in the LHCGR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"Leydig cell hypoplasia","termid":"MONDO:0019155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leydig cell hypoplasia, type 1","secondary_identifiers":["MEDGEN:120576","OMIM:238320","UMLS:C0266432"],"synonyms":[{"name":"LHCGR Leydig cell hypoplasia","type":"exact"},{"name":"Leydig cell Hypoplasia, type 2","type":"related"},{"name":"Leydig cell agenesis","type":"related"},{"name":"Leydig cell hypoplasia caused by mutation in LHCGR","type":"exact"},{"name":"Leydig cell hypoplasia with male pseudohermaphroditism","type":"related"},{"name":"Leydig cell hypoplasia, complete","type":"related"},{"name":"Leydig cell hypoplasia, partial","type":"related"},{"name":"Leydig cell hypoplasia, type I","type":"related"},{"name":"hypergonadotropic hypogonadism, Male, due to Lhcgr defect","type":"related"},{"name":"leydig cell hypoplasia with hypergonadotropic hypogonadism","type":"exact"},{"name":"leydig cell hypoplasia with pseudohermaphroditism","type":"exact"},{"name":"luteinizing hormone resistance, female","type":"related"}],"termid":"MONDO:0009384","xrefs":{"Monarch":{"xref_id":"0009384"}}}


id: PBO:0087843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonyl-tRNA synthetase; essential cytoplasmic protein; human homolog TARS can complement yeast null mutant","termid":"PBO:0087843"}


id: GO:2000537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of B cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte chemotaxis","termid":"GO:1901623"},{"relation_name":"regulates","term_name":"B cell chemotaxis","termid":"GO:0035754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell chemotaxis","termid":"GO:2000537"}


id: GO:0052221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a chemical on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052221)","synonyms":[{"name":"positive chemotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"positive chemotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052221"}


id: PBO:0029341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nickel","termid":"PBO:0029341"}


id: GO:0047839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dATP + depurinated DNA = ribose triphosphate + DNA.","definition_xrefs":["EC:2.6.99.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140097","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"dATP(dGTP)-DNA purinetransferase activity","secondary_identifiers":["MetaCyc:DATPDGTP--DNA-PURINE-TRANSFERASE-RXN"],"synonyms":[{"name":"dATP(dGTP)--DNA purine transferase activity","type":"exact"},{"name":"dATP(dGTP):depurinated-DNA purine transferase activity","type":"related"}],"termid":"GO:0047839"}


id: GO:0005251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a delayed rectifying voltage-gated channel. A delayed rectifying current-voltage relation is one where channel activation kinetics are time-dependent, and inactivation is slow.","definition_xrefs":["PMID:11343411","GOC:mah","PMID:2462513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity","termid":"GO:0005249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"delayed rectifier potassium channel activity","secondary_identifiers":["Reactome:R-HSA-5577050","Reactome:R-HSA-5577237"],"termid":"GO:0005251"}


id: GO:0042810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pheromones, a substance that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"pheromone metabolic process","synonyms":[{"name":"pheromone metabolism","type":"exact"}],"termid":"GO:0042810"}


id: PBO:0062112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 11","termid":"PBO:0062112"}


id: MONDO:0015898
data:
  {"annotated_genes":["SJAG_04270","SJAG_02696","SJAG_02148"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"},{"annotations":[85921,85920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011503"}]},"cv_name":"mondo","definition":"Abnormal sex differentiation or congenital disorders of sex development caused by abnormal levels of steroid hormones expressed by the gonads or the adrenal glands, such as in congenital adrenal hyperplasia and adrenal cortex neoplasms. Due to abnormal steroid biosynthesis, clinical features include virilism in females; feminization in males; or precocious sexual development in children.","definition_xrefs":["MESH:D047808"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic adrenal disease (obsolete MONDO:0015971)","termid":"MONDO:0015971"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"},{"relation_name":"is_a","term_name":"steroid metabolism disease","termid":"MONDO:0045012"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02148":null,"SJAG_02696":null,"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"adrenogenital syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20226","MedDRA:10061630","SCTID:267395000","Orphanet:181412","ICD9:255.2","UMLS:C0302280","MEDGEN:86215","icd11.foundation:131153029"],"synonyms":[{"name":"adrenogenital disorder","type":"exact"},{"name":"adrenogenital syndrome","type":"exact"},{"name":"androgenital syndrome","type":"exact"},{"name":"congenital adrenal hyperplasia","type":"related"}],"termid":"MONDO:0015898","terms_by_termid":{"MONDO:0011503":null,"MONDO:0013310":null},"xrefs":{"Monarch":{"xref_id":"0015898"}}}


id: GO:0033626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of integrin activation by cell surface receptor linked signal transduction. This can occur by increased affinity of an integrin for its extracellular ligands.","definition_xrefs":["PMID:12213832","PMID:14754902","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"positive regulation of integrin activation","termid":"GO:0033625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0065003","GO:0023052","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of integrin activation by cell surface receptor linked signal transduction","synonyms":[{"name":"cell surface receptor linked signal transduction leading to integrin activation","type":"exact"},{"name":"cell surface receptor linked signal transduction leading to integrin complex activation","type":"exact"}],"termid":"GO:0033626"}


id: MONDO:0008776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis of gingiva and conjunctiva, with intellectual disability","secondary_identifiers":["OMIM:204850","MEDGEN:347240","MESH:C565958","UMLS:C1859815"],"synonyms":[{"name":"Hornova Dlushosova syndrome","type":"related"},{"name":"amyloidosis of gingiva and conjunctiva with intellectual disability","type":"related"},{"name":"amyloidosis of gingiva and conjunctiva with mental retardation","type":"related"},{"name":"amyloidosis of gingiva and conjunctiva, with intellectual disability","type":"exact"},{"name":"amyloidosis of gingiva and conjunctiva, with mental retardation","type":"exact"}],"termid":"MONDO:0008776","xrefs":{"Monarch":{"xref_id":"0008776"}}}


id: PBO:0073140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog B3, pseudogene","termid":"PBO:0073140"}


id: FYPO:0000848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of one or more chromosomes is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal chromosome morphology","termid":"FYPO:0005600"},{"relation_name":"output_of","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0000652","FYPO:0001320"],"is_obsolete":false,"name":"abnormal chromosome morphology during vegetative growth","synonyms":[{"name":"abnormal chromosome morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000848"}


id: PBO:0028995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_proline_import","termid":"PBO:0028995"}


id: GO:0072664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location in a peroxisome, and is prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein localization in organelle","termid":"GO:0072595"},{"relation_name":"part_of","term_name":"protein localization to peroxisome","termid":"GO:0072662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007031"}],"interesting_parent_ids":["GO:0007031","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein location in peroxisome","termid":"GO:0072664"}


id: PBO:0034340
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_breakdown_of","termid":"PBO:0034340"}


id: PBO:0070991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 15","termid":"PBO:0070991"}


id: PBO:0028424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_actomyosin_contractile_ring,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028424"}


id: PBO:0028897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_pear-shaped_vegetative_cell","termid":"PBO:0028897"}


id: GO:0010479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stele over time, from its formation to the mature structure. The stele is the central column of primary vascular tissue in the root and any tissue that it surrounds.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stele development","termid":"GO:0010479"}


id: PBO:0017919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, double strand break localizing Dbl7","termid":"PBO:0017919"}


id: MONDO:1010040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyloric stenosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyloric stenosis, non-human animal","secondary_identifiers":["OMIA:000843"],"termid":"MONDO:1010040","xrefs":{"Monarch":{"xref_id":"1010040"}}}


id: PBO:0091272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4210 domain protein, human FAM214A ortholog, implicated in chromosome segregation","termid":"PBO:0091272"}


id: PBO:0028807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_genetic_imprinting_at_mating-type_locus","termid":"PBO:0028807"}


id: PR:O13910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar ribonucleoprotein protein MPP10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00881","PANTHER:PTHR17039:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar ribonucleoprotein protein mpp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.03","secondary_identifiers":["UniProtKB:O13910"],"synonyms":[{"name":"Spom972h-MPHOSPH10","type":"exact"}],"termid":"PR:O13910"}


id: PBO:0074314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 4","termid":"PBO:0074314"}


id: FYPO:0003984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of an amino acid measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"altered cellular amino acid level during vegetative growth","synonyms":[{"name":"abnormal cellular amino acid level during vegetative growth","type":"exact"},{"name":"altered cellular amino acid level during mitotic cell cycle","type":"related"},{"name":"altered level of amino acid in cell","type":"exact"}],"termid":"FYPO:0003984"}


id: PBO:0111741
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family","termid":"PBO:0111741"}


id: GO:0160028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of a pyroptotic inflammatory response.","definition_xrefs":["PMID:34637033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"negatively_regulates","term_name":"pyroptotic inflammatory response","termid":"GO:0070269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pyroptotic inflammatory response","synonyms":[{"name":"negative regulation of pyroptosis","type":"broad"}],"termid":"GO:0160028"}


id: PBO:0046912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member E4","termid":"PBO:0046912"}


id: MONDO:0013862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency, common variable, 7","secondary_identifiers":["NANDO:2200801","OMIM:614699","DOID:0081150","MEDGEN:762276","GARD:15836","UMLS:C3542922"],"synonyms":[{"name":"CVID7","type":"related"},{"name":"immunodeficiency, common variable, 7","type":"exact"},{"name":"immunodeficiency, common variable, type 7","type":"exact"}],"termid":"MONDO:0013862","xrefs":{"Monarch":{"xref_id":"0013862"}}}


id: GO:0030857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epithelial cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"negatively_regulates","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial cell differentiation","synonyms":[{"name":"down regulation of epithelial cell differentiation","type":"exact"},{"name":"down-regulation of epithelial cell differentiation","type":"exact"},{"name":"downregulation of epithelial cell differentiation","type":"exact"},{"name":"inhibition of epithelial cell differentiation","type":"narrow"}],"termid":"GO:0030857"}


id: PBO:0002604
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAG acceptor","termid":"PBO:0002604"}


id: PBO:0034211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_intercellular_endoparasite","termid":"PBO:0034211"}


id: PBO:0036221
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_arginase_activity","termid":"PBO:0036221"}


id: GO:0061428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hypoxia stimulus.","definition_xrefs":["GOC:dph","PMID:17785431"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to hypoxia (obsolete GO:0061428)","termid":"GO:0061428"}


id: GO:0034896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-formiminopyruvate + H2O = 3-formylpyruvate + HN3.","definition_xrefs":["UM-BBD_reactionID:r1400"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-formiminopyruvate hydrolase activity (obsolete GO:0034896)","termid":"GO:0034896"}


id: GO:0047642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-aldosyl1 beta-D-fructoside + D-aldose2 = D-aldose1 + alpha-D-aldosyl2 beta-D-fructoside.","definition_xrefs":["MetaCyc:ALDOSE-BETA-FRUCTOSYLTRANSFERASE-RXN","EC:2.4.1.162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosyltransferase activity","termid":"GO:0050738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"aldose beta-D-fructosyltransferase activity","synonyms":[{"name":"aldose b-D-fructosyltransferase activity","type":"exact"},{"name":"alpha-D-aldosyl-beta-D-fructoside:aldose 1-beta-D-fructosyltransferase activity","type":"related"}],"termid":"GO:0047642"}


id: PBO:0074909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 80","termid":"PBO:0074909"}


id: MONDO:0003808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma arising from the mediastinum.","definition_xrefs":["NCIT:C6615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraosseous osteosarcoma","termid":"MONDO:0002621"},{"relation_name":"is_a","term_name":"mediastinum sarcoma","termid":"MONDO:0002852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mediastinal extraskeletal osteosarcoma","secondary_identifiers":["DOID:6208","UMLS:C1334675","MEDGEN:235314"],"synonyms":[{"name":"mediastinal extraskeletal osteosarcoma","type":"exact"},{"name":"mediastinal osteogenic sarcoma","type":"exact"},{"name":"mediastinal osteosarcoma","type":"exact"},{"name":"mediastinum osteosarcoma (disease)","type":"exact"},{"name":"osteogenic sarcoma of mediastinum","type":"exact"},{"name":"osteogenic sarcoma of the mediastinum","type":"exact"},{"name":"osteosarcoma of mediastinum","type":"exact"},{"name":"osteosarcoma of the mediastinum","type":"exact"}],"termid":"MONDO:0003808","xrefs":{"Monarch":{"xref_id":"0003808"}}}


id: PBO:0052106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A regulatory beta subunit 1","termid":"PBO:0052106"}


id: GO:0043886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a carboxysome shell, an organelle found in all cyanobacteria and some chemoautotrophs, consisting of a proteinaceous coat and enzymes for the fixation of CO2.","definition_xrefs":["PMID:28934381","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of carboxysome shell","synonyms":[{"name":"structural constituent of carboxysome","type":"related"}],"termid":"GO:0043886"}


id: PBO:0013109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP GTPase subunit Cwf10","termid":"PBO:0013109"}


id: FYPO:0002239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form telomeres that are shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere length during vegetative growth","termid":"FYPO:0006464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"shortened telomeres during vegetative growth","synonyms":[{"name":"decreased telomere length during vegetative growth","type":"exact"},{"name":"reduced telomere length during vegetative growth","type":"exact"},{"name":"short telomeres during vegetative growth","type":"exact"},{"name":"shortened telomeres during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002239"}


id: PBO:0003507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1769 family protein","termid":"PBO:0003507"}


id: PBO:0031434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_1-NA-PP1","termid":"PBO:0031434"}


id: GO:1905941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gonad development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15342467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of gonad development","termid":"GO:1905939"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gonad development","synonyms":[{"name":"activation of gonad development","type":"narrow"},{"name":"activation of gonadogenesis","type":"narrow"},{"name":"positive regulation of gonadogenesis","type":"exact"},{"name":"up regulation of gonad development","type":"exact"},{"name":"up regulation of gonadogenesis","type":"exact"},{"name":"up-regulation of gonad development","type":"exact"},{"name":"up-regulation of gonadogenesis","type":"exact"},{"name":"upregulation of gonad development","type":"exact"},{"name":"upregulation of gonadogenesis","type":"exact"}],"termid":"GO:1905941"}


id: PBO:0043665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q8B","termid":"PBO:0043665"}


id: GO:0070253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of somatostatin from secretory granules in the D cells of the pancreas.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"somatostatin secretion","termid":"GO:0070253"}


id: GO:0044169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the host cell rough endoplasmic reticulum.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endoplasmic reticulum membrane","termid":"GO:0044167"},{"relation_name":"part_of","term_name":"host cell rough endoplasmic reticulum","termid":"GO:0044168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell rough endoplasmic reticulum membrane","synonyms":[{"name":"host rough endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0044169"}


id: PBO:0051262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-67-4 (pseudogene)","termid":"PBO:0051262"}


id: FYPO:0003568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of a spindle pole body (SPB) into the nuclear envelope is abnormal, and the SPB enters the nucleus. An open fenestra remains present in the nuclear envelope.","definition_xrefs":["PomBase:mah","PMID:24963130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope","termid":"FYPO:0003567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000138"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm","synonyms":[{"name":"SPB unanchored to nuclear envelope","type":"related"},{"name":"abnormal establishment of mitotic spindle pole body localization to nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal mitotic SPB insertion into nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm, during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm, during vegetative growth","type":"exact"},{"name":"spindle pole body in nucleoplasm, unanchored to nuclear envelope","type":"related"},{"name":"spindle pole body unanchored to nuclear envelope","type":"related"},{"name":"unanchored spindle pole bodies","type":"related"}],"termid":"FYPO:0003568"}


id: PBO:0068630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 10, pseudogene","termid":"PBO:0068630"}


id: MONDO:0000284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hantavirus hemorrhagic fever with renal syndrome","termid":"MONDO:0005784"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Hantavirus hemorrhagic fever with renal syndrome, Puumala virus type","secondary_identifiers":["DOID:0050201","MEDGEN:69308","UMLS:C0242993"],"synonyms":[{"name":"nephropathia epidemica","type":"related"},{"name":"nephropathis epidemica","type":"exact"}],"termid":"MONDO:0000284","xrefs":{"Monarch":{"xref_id":"0000284"}}}


id: MONDO:0005771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign condition characterized by the development of irregular patches in the surface of the tongue resulting in a map-like appearance. The patches migrate from day to day and usually resolve without treatment.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrophic glossitis","termid":"MONDO:0001989"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geographic tongue","secondary_identifiers":["EFO:0007283","icd11.foundation:1460387786","ICD10CM:K14.1","SCTID:59032001","MEDGEN:6619","NCIT:C84588","ICD9:529.1","UMLS:C0017677","DOID:1455"],"synonyms":[{"name":"Pityriasis linguae","type":"exact"},{"name":"benign migratory glossitis","type":"exact"},{"name":"glossitis areata exfoliativa","type":"exact"}],"termid":"MONDO:0005771","xrefs":{"Monarch":{"xref_id":"0005771"}}}


id: GO:0090287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"}


id: PATO:0001296
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A scalar optical quality which obtains by the magnitude of the light emitted by the bearer.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optical quality","termid":"PATO:0001300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"luminous flux","termid":"PATO:0001296"}


id: MONDO:0020197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete EEC syndrome and related syndrome (obsolete MONDO:0020197)","secondary_identifiers":["Orphanet:98609"],"synonyms":[{"name":"ectrodactyly-ectodermal dysplasia-cleft lip/palate syndrome and related disorders","type":"exact"}],"termid":"MONDO:0020197","xrefs":{"Monarch":{"xref_id":"0020197"}}}


id: GO:0102733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: typhasterol + O2 + a reduced electron acceptor = castasterone + H2O + an oxidized electron acceptor.","definition_xrefs":["PMID:17138693","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"typhasterol C-23 hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-719"],"termid":"GO:0102733"}


id: PBO:0053933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1232","termid":"PBO:0053933"}


id: PBO:0027235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_silent_mating-type_cassette","termid":"PBO:0027235"}


id: PBO:0058535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6080","termid":"PBO:0058535"}


id: GO:0060666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a salivary epithelial cord bifurcates at its end.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dichotomous subdivision of an epithelial terminal unit","termid":"GO:0060600"},{"relation_name":"part_of","term_name":"branching involved in salivary gland morphogenesis","termid":"GO:0060445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dichotomous subdivision of terminal units involved in salivary gland branching","termid":"GO:0060666"}


id: PBO:0091681
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MicroTubule Organizer","termid":"PBO:0091681"}


id: MONDO:0005418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Left ventricular non-compaction (LVNC) is characterized by prominent left ventricular trabeculae and deep inter-trabecular recesses. The myocardial wall is often thickened with a thin, compacted epicardial layer and a thickened endocardial layer. In some patients, LVNC is associated with left ventricular dilatation and systolic dysfunction, which can be transient in neonates.","definition_xrefs":["EFO:0004686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"non-compaction cardiomyopathy","secondary_identifiers":["MEDGEN:1843481","UMLS:C4324548"],"termid":"MONDO:0005418","xrefs":{"Monarch":{"xref_id":"0005418"}}}


id: FYPO:0001882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of one or more enzymes that degrades cell wall polysaccharides than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to cell wall-degrading enzymes","synonyms":[{"name":"resistance to Lyticase","type":"narrow"},{"name":"resistance to Novozyme 234","type":"narrow"},{"name":"resistance to Zymolyase","type":"narrow"},{"name":"resistance to cell wall-degrading enzymes during mitotic cell cycle","type":"related"},{"name":"resistance to cell wall-degrading enzymes during vegetative growth","type":"exact"},{"name":"resistant to cell wall-degrading enzymes","type":"exact"}],"termid":"FYPO:0001882"}


id: GO:0098003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a virus tail.","definition_xrefs":["GOC:bm","VZ:3955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral tail assembly","synonyms":[{"name":"bacteriophage tail assembly","type":"narrow"},{"name":"virus tail assembly","type":"exact"}],"termid":"GO:0098003"}


id: GO:0043235
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038038"}]},"cv_name":"cellular_component","definition":"Any protein complex that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"receptor complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0043235","terms_by_termid":{"GO:0038038":null}}


id: PBO:0038410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-characteristic_of_part_of","termid":"PBO:0038410"}


id: PBO:0109838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 histone acetyltransferase core complex-Piccolo HAT module linker protein Epl1","termid":"PBO:0109838"}


id: PBO:0086485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative nucleotide sugar transporter; has similarity to Vrg4p","termid":"PBO:0086485"}


id: PBO:0086600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is increased greatly during sporulation; YEL023C is not an essential gene","termid":"PBO:0086600"}


id: PBO:0035922
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_acetylation_during_vegetative_growth","termid":"PBO:0035922"}


id: SO:0001528
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to the nucleus.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"nuclear_localization_signal","secondary_identifiers":["http://en.wikipedia.org/wiki/Nuclear_localization_signal"],"synonyms":[{"name":"NLS","type":"exact"}],"termid":"SO:0001528"}


id: PBO:0027166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_premeiotic_DNA_replication_initiation_resulting_in_complete_rereplication","termid":"PBO:0027166"}


id: PBO:0061403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPR2 like, GATOR1 complex subunit","termid":"PBO:0061403"}


id: PBO:0116702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 8 (gene/pseudogene)","termid":"PBO:0116702"}


id: PBO:0064542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 3, pseudogene","termid":"PBO:0064542"}


id: PBO:0082388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta-adaptin; large subunit of the clathrin associated protein complex (AP-2); involved in vesicle mediated transport; similar to mammalian beta-chain of the clathrin associated protein complex","termid":"PBO:0082388"}


id: PBO:0068486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 68, pseudogene","termid":"PBO:0068486"}


id: GO:0046938
data:
  {"annotated_genes":["SJAG_00988","SJAG_01351","SJAG_02599","SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71184,93656,97345,108745],"is_not":false,"summary":null,"term":"GO:0046938"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytochelatins, any of a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes. The structure is of the type (gamma-glutamyl-cysteinyl)n-glycine, where n is 2 to 11.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phytochelatin metabolic process","termid":"GO:0046937"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"phytochelatin biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cadystin biosynthetic process","type":"related"},{"name":"phytochelatin anabolism","type":"exact"},{"name":"phytochelatin biosynthesis","type":"exact"},{"name":"phytochelatin formation","type":"exact"},{"name":"phytochelatin synthesis","type":"exact"}],"termid":"GO:0046938","terms_by_termid":{"GO:0046938":null}}


id: GO:0008545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of tyrosine and threonine residues in a c-Jun NH2-terminal kinase (JNK), a member of a subgroup of mitogen-activated protein kinases (MAPKs), which signal in response to cytokines and exposure to environmental stress. JUN kinase kinase (JNKK) is a dual-specificity protein kinase kinase and requires activation by a serine/threonine kinase JUN kinase kinase kinase.","definition_xrefs":["PMID:11057897","GOC:bf","PMID:11790549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAP kinase kinase activity","termid":"GO:0004708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016301","GO:0016740","GO:0004672","GO:0003824"],"is_obsolete":false,"name":"JUN kinase kinase activity","secondary_identifiers":["Reactome:R-HSA-168162"],"synonyms":[{"name":"JNKK","type":"exact"}],"termid":"GO:0008545"}


id: PBO:0030803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030803"}


id: FYPO:0005825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to iron ions. Cells stop growing (and may die) at a concentration of iron ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to iron","synonyms":[{"name":"hypersensitive to iron","type":"exact"},{"name":"sensitive to iron during mitotic cell cycle","type":"related"},{"name":"sensitive to iron during vegetative growth","type":"exact"},{"name":"sensitive to iron ions","type":"exact"}],"termid":"FYPO:0005825"}


id: PBO:0049329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIF subunit 1","termid":"PBO:0049329"}


id: PBO:0071875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 13","termid":"PBO:0071875"}


id: PBO:0040310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 2","termid":"PBO:0040310"}


id: GO:0048003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses lipid antigen in association with an MHC class Ib protein complex on its cell surface, including lipid extraction, degradation, and transport steps for the lipid antigen both prior to and following assembly with the MHC protein complex. The lipid antigen may originate from an endogenous or exogenous source of lipid. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family.","definition_xrefs":["PMID:15928680","PMID:10375559","PMID:15928678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"antigen presentation, lipid antigen","type":"exact"},{"name":"lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0048003"}


id: PBO:0041925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 1","termid":"PBO:0041925"}


id: GO:0035341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of inosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleoside transport","termid":"GO:0032245"},{"relation_name":"regulates","term_name":"inosine transport","termid":"GO:0035340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of inosine transport","synonyms":[{"name":"regulation of hypoxanthine riboside transport","type":"exact"}],"termid":"GO:0035341"}


id: GO:0033535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ajugose, the hexasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"ajugose metabolic process","synonyms":[{"name":"ajugose metabolism","type":"exact"}],"termid":"GO:0033535"}


id: PBO:0077773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 40 like","termid":"PBO:0077773"}


id: PBO:0054473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1873","termid":"PBO:0054473"}


id: PBO:0041321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 73","termid":"PBO:0041321"}


id: PBO:0065885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB33B antisense RNA 1","termid":"PBO:0065885"}


id: FYPO:0003987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of actin cortical patches is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"},{"relation_name":"output_of","term_name":"abnormal actin cortical patch organization","termid":"FYPO:0000790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin cortical patch","synonyms":[{"name":"abnormal F-actin patch","type":"exact"},{"name":"abnormal actin cortical patch during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patches","type":"exact"},{"name":"abnormal actin patch","type":"exact"}],"termid":"FYPO:0003987"}


id: PBO:0026725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_proteasome_localization_to_nuclear_periphery","termid":"PBO:0026725"}


id: GO:0050735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a malonyl group to a nitrogen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"},{"relation_name":"is_a","term_name":"malonyltransferase activity","termid":"GO:0016420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"N-malonyltransferase activity","termid":"GO:0050735"}


id: FYECO:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The expression level of the gene was altered in the experiment, compared to expressing the gene from the genome and its endogenous promoter.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000003 expression level (obsolete FYECO:0000003)","termid":"FYECO:0000003"}


id: FYPO:0003534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the monopolar index is lower than normal. The monopolar index is the proportion of the population undergoing monopolar growth at any given time.","definition_xrefs":["PMID:20501954","PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased monopolar index","synonyms":[{"name":"decreased frequency of monopolar growth polarity","type":"related"},{"name":"decreased number of cells undergoing monopolar growth","type":"exact"},{"name":"reduced monopolar index","type":"exact"}],"termid":"FYPO:0003534"}


id: GO:0120061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of any gastric emptying process, the process in which the liquid and liquid-suspended solid contents of the stomach exit through the pylorus into the duodenum.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of gastric emptying","termid":"GO:0120060"},{"relation_name":"negatively_regulates","term_name":"gastric emptying","termid":"GO:0035483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of gastric emptying","termid":"GO:0120061"}


id: MONDO:0100569
data:
  {"annotated_genes":["SJAG_01378"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014690"}]},"cv_name":"mondo","definition":"A spectrum of conditions, including dyskeratosis congenita, Hoyeraal-Hreidarsson syndrome, hereditary aplastic anemia, and pulmonary fibrosis, typically characterized by shortened telomeres due to a pathogenic variant(s) in ACD that results in impaired telomere maintenance.","direct_ancestors":[{"relation_name":"is_a","term_name":"ACD-related telomere biology disorder","termid":"MONDO:0800469"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01378":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"ACD-related short telomere syndrome","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100569","terms_by_termid":{"MONDO:0014690":null},"xrefs":{"Monarch":{"xref_id":"0100569"}}}


id: PBO:0067593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 754, pseudogene","termid":"PBO:0067593"}


id: PBO:0069760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1043, pseudogene","termid":"PBO:0069760"}


id: PBO:0031882
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by human MUTYH","termid":"PBO:0031882"}


id: GO:0002821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an adaptive immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response","termid":"GO:0002819"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adaptive immune response","synonyms":[{"name":"activation of adaptive immune response","type":"narrow"},{"name":"stimulation of adaptive immune response","type":"narrow"},{"name":"up regulation of adaptive immune response","type":"exact"},{"name":"up-regulation of adaptive immune response","type":"exact"},{"name":"upregulation of adaptive immune response","type":"exact"}],"termid":"GO:0002821"}


id: PBO:0080469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport through interaction with t-SNAREs 1B","termid":"PBO:0080469"}


id: PBO:0065517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypyrimidine tract binding protein 2","termid":"PBO:0065517"}


id: PBO:0028273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_microtubule_dwell_time_at_cell_tip","termid":"PBO:0028273"}


id: MONDO:0020258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oculomotor apraxia or related oculomotor disease (obsolete MONDO:0020258)","secondary_identifiers":["Orphanet:98688","icd11.foundation:855225863"],"termid":"MONDO:0020258","xrefs":{"Monarch":{"xref_id":"0020258"}}}


id: MONDO:0018047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"familial thrombomodulin anomalies","secondary_identifiers":["UMLS:C2931365","MEDGEN:419059","HGNC:11784","MESH:C536900","Orphanet:3324","GARD:5195"],"synonyms":[{"name":"thrombomodulin anomalies, familial","type":"related"}],"termid":"MONDO:0018047","xrefs":{"Monarch":{"xref_id":"0018047"}}}


id: PBO:0047261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member D","termid":"PBO:0047261"}


id: PBO:0084206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homeobox transcriptional repressor; binds to Mcm1p and to early cell cycle boxes (ECBs) in the promoters of cell cycle-regulated genes expressed in M/G1 phase; expression is cell cycle-regulated; phosphorylated by Cdc28p; relocalizes from nucleus to cytoplasm upon DNA replication stress; YOX1 has a paralog, YHP1, that arose from the whole genome duplication","termid":"PBO:0084206"}


id: MONDO:0024882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from a pre-existing lower grade lesion, or as a result of a primary lesion that has spread to secondary sites, or due to a complication of a cancer treatment.","definition_xrefs":["NCIT:C36255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic disease or syndrome","termid":"MONDO:0023370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary neoplasm","secondary_identifiers":["MEDGEN:1851572","UMLS:C5848363"],"synonyms":[{"name":"secondary neoplasm","type":"exact"},{"name":"secondary tumor","type":"exact"},{"name":"secondary tumour","type":"exact"}],"termid":"MONDO:0024882","xrefs":{"Monarch":{"xref_id":"0024882"}}}


id: GO:1990935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein involved in the process of removing sections of the primary RNA transcript to form the mature form of the RNA.","definition_xrefs":["PMID:11118435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"splicing factor binding","termid":"GO:1990935"}


id: GO:0015055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with secretin to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"secretin receptor activity","termid":"GO:0015055"}


id: PBO:0055608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3047","termid":"PBO:0055608"}


id: GO:0102033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an omega-methyl-long-chain fatty acid + O2 + reduced [NADPH--hemoprotein reductase] = an omega-hydroxy-long-chain fatty acid + H+ + H2O + oxidized [NADPH--hemoprotein reductase]. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["PMID:18544608","RHEA:56748","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid omega-hydroxylase activity","termid":"GO:0120250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"long-chain fatty acid omega-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-16394","EC:1.14.14.80"],"synonyms":[{"name":"cytochrome P450 fatty acid omega-hydroxylase activity","type":"related"}],"termid":"GO:0102033"}


id: PBO:0091597
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously incorrectly annotated as pex22","termid":"PBO:0091597"}


id: GO:0036370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding a D-alanine and presenting it for processing or offloading to a cognate enzyme. Covalently binds the D-alanine via a phosphopantetheine prosthetic group and mediates protein-protein interactions with the enzyme conferring specificity. The carrier protein provides an essential link between the D-alanine-D-alanyl carrier protein ligase and the incorporation of D-alanine into lipoteichoic acid by transferring activated D-alanine to cell membrane phosphatidylglycerol (PG).","definition_xrefs":["PMID:8682792","PMID:11222605","GOC:crds","PMID:22750871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphopantetheine-dependent carrier activity","termid":"GO:0140414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"D-alanyl carrier activity","synonyms":[{"name":"D-alanyl carrier protein","type":"related"}],"termid":"GO:0036370"}


id: PBO:0083403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the 5' end of the essential PRP4 gene encoding a component of the U4/U6-U5 snRNP complex","termid":"PBO:0083403"}


id: PBO:0109054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIB1 associated lncRNA","termid":"PBO:0109054"}


id: GO:0106282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-beta,7-beta-dihydroxy-5-beta-cholan-24-oate + NAD+ = 3-beta-hydroxy-7-oxo-5-beta-cholan-24-oate + H+ + NADH.","definition_xrefs":["RHEA:42024","PMID:12917011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isoursodeoxycholate 7-beta-dehydrogenase (NAD+) activity","termid":"GO:0106282"}


id: PBO:0081872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 814","termid":"PBO:0081872"}


id: PBO:0065952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD18 E3 ubiquitin protein ligase","termid":"PBO:0065952"}


id: MONDO:0007581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exchondrosis of pinna, posterior","secondary_identifiers":["UMLS:C1851463","MESH:C565036","MEDGEN:377032","OMIM:133500"],"synonyms":[{"name":"Ear bump","type":"related"},{"name":"exchondrosis of pinna, posterior","type":"exact"}],"termid":"MONDO:0007581","xrefs":{"Monarch":{"xref_id":"0007581"}}}


id: PBO:0027644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_alpha-galactosidase_activity","termid":"PBO:0027644"}


id: MONDO:0004670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune, connective tissue chronic inflammatory disorder affecting the skin, joints, kidneys, lungs, heart, and the peripheral blood cells. It is more commonly seen in women than men. Variants include discoid and systemic lupus erythematosus.","definition_xrefs":["NCIT:C27153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lupus erythematosus","secondary_identifiers":["ICD9:695.4","UMLS:C0409974","ICD10CM:L93","MEDGEN:98043","icd11.foundation:1443317238","SCTID:200936003","DOID:8857"],"synonyms":[{"name":"lupus","type":"exact"},{"name":"lupus erythematosus","type":"exact"}],"termid":"MONDO:0004670","xrefs":{"Monarch":{"xref_id":"0004670"}}}


id: PBO:0033777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_organization_resulting_in_peripheral_chromatin_distribution","termid":"PBO:0033777"}


id: PBO:0042406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 20","termid":"PBO:0042406"}


id: MONDO:0018948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary neuromuscular disorder characterized by multiple cores on muscle biopsy and clinical features of a congenital myopathy.","definition_xrefs":["Orphanet:598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of selenoprotein N1","termid":"MONDO:0016197"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiminicore myopathy","secondary_identifiers":["GARD:16536","MEDGEN:75731","DOID:0080991","NANDO:1200480","NANDO:2200871","UMLS:C0270962","SCTID:55133004"],"synonyms":[{"name":"MmD","type":"exact"},{"name":"multicore disease","type":"exact"},{"name":"multicore myopathy","type":"exact"},{"name":"multiminicore disease","type":"exact"}],"termid":"MONDO:0018948","xrefs":{"Monarch":{"xref_id":"0018948"}}}


id: GO:1905735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-proline import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24344203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proline transport","termid":"GO:0070881"},{"relation_name":"is_a","term_name":"regulation of proline import across plasma membrane","termid":"GO:1902834"},{"relation_name":"regulates","term_name":"L-proline import across plasma membrane","termid":"GO:1904271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of L-proline import across plasma membrane","termid":"GO:1905735"}


id: FYPO:0005783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic checkpoint complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic checkpoint complex assembly","synonyms":[{"name":"normal MCC assembly","type":"exact"},{"name":"normal mitotic checkpoint complex assembly during mitotic cell cycle","type":"related"},{"name":"normal mitotic checkpoint complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005783"}


id: PBO:0053869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1144","termid":"PBO:0053869"}


id: GO:0034022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxyaminophenol = aminohydroquinone.","definition_xrefs":["RHEA:20577","EC:5.4.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"3-(hydroxyamino)phenol mutase activity","secondary_identifiers":["UM-BBD_enzymeID:r1496","MetaCyc:5.4.4.3-RXN","KEGG_REACTION:R06988"],"synonyms":[{"name":"3-(hydroxyamino)phenol hydroxymutase activity","type":"related"},{"name":"3-hydroxylaminophenol mutase activity","type":"related"},{"name":"3HAP mutase activity","type":"related"}],"termid":"GO:0034022"}


id: GO:0035694
data:
  {"annotated_genes":["SJAG_03393","SJAG_00354","SJAG_00476","SJAG_00984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93616,97651,101416,107276],"is_not":false,"summary":null,"term":"GO:0035694"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a mitochondrial protein. This process is necessary to maintain the healthy state of mitochondria and is thought to occur via the induction of an intramitochondrial lysosome-like organelle that acts to eliminate the damaged oxidised mitochondrial proteins without destroying the mitochondrial structure.","definition_xrefs":["PMID:21264221","GOC:sp","PMID:21264228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"part_of","term_name":"mitochondrion organization","termid":"GO:0007005"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00354":null,"SJAG_00476":null,"SJAG_00984":null,"SJAG_03393":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0007005","GO:0008150","GO:0030163"],"is_obsolete":false,"name":"mitochondrial protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9837999"],"synonyms":[{"name":"catabolism of mitochondrial protein","type":"exact"},{"name":"degradation of damaged mitochondrial protein","type":"exact"}],"termid":"GO:0035694","terms_by_termid":{"GO:0035694":null}}


id: PBO:0109599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARB2 cotranscriptional regulator A","termid":"PBO:0109599"}


id: MONDO:0023153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of abdominal tuberculosis that is characterized by accumulation of fluid in the abdomen, a swollen abdomen, and slightly raised tubercles of 1–2 mm all over the peritoneum.","definition_xrefs":["doi:10.5772/intechopen.70417"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"tuberculosis","termid":"MONDO:0018076"},{"relation_name":"is_a","term_name":"abdominal tuberculosis","termid":"MONDO:0000369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous ascites","secondary_identifiers":["NCIT:C27076","UMLS:C0275919","SCTID:4501007","icd11.foundation:1747509566","MEDGEN:78815"],"synonyms":[{"name":"tuberculous ascites","type":"exact"}],"termid":"MONDO:0023153","xrefs":{"Monarch":{"xref_id":"0023153"}}}


id: GO:0050372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: n ATP + calmodulin + n ubiquitin = n AMP + n diphosphate + ubiquitin(n)-calmodulin.","definition_xrefs":["MetaCyc:UBIQUITIN--CALMODULIN-LIGASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-calmodulin ligase activity (obsolete GO:0050372)","synonyms":[{"name":"calmodulin:ubiquitin ligase (AMP-forming)","type":"related"},{"name":"uCaM-synthetase activity","type":"related"},{"name":"ubiquitin-calmodulin synthetase activity","type":"related"},{"name":"ubiquityl-calmodulin synthase activity","type":"related"},{"name":"ubiquityl-calmodulin synthetase activity","type":"related"}],"termid":"GO:0050372"}


id: PBO:0050953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon gamma","termid":"PBO:0050953"}


id: PBO:0054656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2061","termid":"PBO:0054656"}


id: GO:1901229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of non-canonical Wnt signaling pathway via JNK cascade.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of non-canonical Wnt signaling pathway via JNK cascade (obsolete GO:1901229)","synonyms":[{"name":"regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"regulation of non-canonical Wnt-activated signaling pathway via JNK cascade","type":"exact"}],"termid":"GO:1901229"}


id: PBO:0014577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute inhibitor protein 1","termid":"PBO:0014577"}


id: PBO:0078898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (CTG) 8-2","termid":"PBO:0078898"}


id: MOD:01844
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue and an L-leucine residue to 2-(3-methylbutanoyl)-5-hydroxyoxazole-4-carbothionic acid.","definition_xrefs":["PubMed:18729522","PubMed:20961038","RESID:AA0550","PubMed:15361623","PubMed:21254756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Cys)","termid":"MOD:01856"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-leucine residue","termid":"MOD:02050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(3-methylbutanoyl)-5-hydroxyoxazole-4-carbothionic acid","synonyms":[{"name":"(4Z)-4-[hydroxy(sulfanyl)methylidene]-2-(3-methylbutanoyl)-1,3-oxazol-5(4H)-one [tautomer]","type":"exact"},{"name":"2-(3-methylbutanoyl)-5-hydroxyoxazole-4-carbothionic acid","type":"exact"},{"name":"5-hydroxy-2-(3-methylbutanoyl)-1,3-oxazole-4-carbothioic O-acid","type":"exact"},{"name":"MOD_RES 2-(3-methylbutanoyl)-5-hydroxyoxazole-4-carbothionic acid (Leu-Cys)","type":"exact"}],"termid":"MOD:01844"}


id: FYPO:0001082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell wall polysaccharide level","termid":"FYPO:0002266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002946"],"is_obsolete":false,"name":"decreased cell wall beta-glucan level","synonyms":[{"name":"decreased cell wall beta-D-glucan level","type":"exact"},{"name":"decreased cell wall beta-glucan accumulation","type":"related"},{"name":"decreased cell wall beta-glucan level during mitotic cell cycle","type":"related"},{"name":"decreased cell wall beta-glucan level during vegetative growth","type":"exact"},{"name":"reduced cell wall beta-glucan level","type":"exact"}],"termid":"FYPO:0001082"}


id: GO:1902888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an astral microtubule.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:16054030","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle microtubule","termid":"GO:1902889"},{"relation_name":"is_a","term_name":"protein localization to cytoplasmic microtubule","termid":"GO:1905755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to astral microtubule","synonyms":[{"name":"protein localisation in astral microtubule","type":"exact"},{"name":"protein localisation to astral microtubule","type":"exact"},{"name":"protein localization in astral microtubule","type":"exact"}],"termid":"GO:1902888"}


id: PBO:0073949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 20 member 1 pseudogene 2","termid":"PBO:0073949"}


id: PBO:0079228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 5","termid":"PBO:0079228"}


id: PBO:0043770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor COX19","termid":"PBO:0043770"}


id: PBO:0065285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 1","termid":"PBO:0065285"}


id: PBO:0075267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 20","termid":"PBO:0075267"}


id: MONDO:0012046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital corneal opacities, cornea guttata, and corectopia","secondary_identifiers":["UMLS:C1837970","MEDGEN:324911","OMIM:608484","MESH:C563921"],"synonyms":[{"name":"congenital corneal opacities, cornea guttata, and corectopia","type":"exact"},{"name":"corneal opacities, congenital, with cornea guttata and corectopia","type":"related"}],"termid":"MONDO:0012046","xrefs":{"Monarch":{"xref_id":"0012046"}}}


id: PBO:0003963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase phi","termid":"PBO:0003963"}


id: GO:0060337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by type I interferon binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:add","GOC:dph","GOC:signaling","PMID:32464097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon-mediated signaling pathway","termid":"GO:0140888"},{"relation_name":"part_of","term_name":"cellular response to type I interferon","termid":"GO:0071357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"type I interferon-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-909733"],"synonyms":[{"name":"type I interferon signaling pathway","type":"exact"},{"name":"type I interferon-activated signaling pathway","type":"exact"}],"termid":"GO:0060337"}


id: PBO:0040667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal cell adhesion molecule (Lutheran blood group)","termid":"PBO:0040667"}


id: GO:0047447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: erythro-3-hydroxy-L-aspartate = NH3 + oxaloacetic acid.","definition_xrefs":["EC:4.3.1.20","MetaCyc:4.3.1.20-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"erythro-3-hydroxyaspartate ammonia-lyase activity","secondary_identifiers":["RHEA:19757"],"synonyms":[{"name":"3-hydroxyaspartate dehydratase activity","type":"broad"},{"name":"erythro-3-hydroxy-L(s)-aspartate hydro-lyase (deaminating) activity","type":"related"},{"name":"erythro-3-hydroxy-Ls-aspartate ammonia-lyase (oxaloacetate-forming)","type":"related"},{"name":"erythro-3-hydroxy-Ls-aspartate ammonia-lyase activity","type":"related"},{"name":"erythro-3-hydroxy-Ls-aspartate hydro-lyase (deaminating)","type":"related"},{"name":"erythro-3-hydroxyaspartate dehydratase activity","type":"exact"},{"name":"erythro-beta-hydroxyaspartate dehydratase activity","type":"related"}],"termid":"GO:0047447"}


id: MONDO:0003975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma involving a male urethral gland.","definition_xrefs":["MONDO:patterns/carcinoma"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"male reproductive organ cancer","termid":"MONDO:0005836"},{"relation_name":"is_a","term_name":"male urethral cancer","termid":"MONDO:0004197"},{"relation_name":"is_a","term_name":"carcinoma of urethra","termid":"MONDO:0021327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Littre gland carcinoma","secondary_identifiers":["DOID:6721","NCIT:C39865","UMLS:C1516285","MEDGEN:273092"],"synonyms":[{"name":"carcinoma of LittrC) glands","type":"exact"},{"name":"carcinoma of Littre glands","type":"exact"},{"name":"carcinoma of Littré glands","type":"exact"},{"name":"carcinoma of male urethral gland","type":"exact"},{"name":"male urethral gland carcinoma","type":"exact"}],"termid":"MONDO:0003975","xrefs":{"Monarch":{"xref_id":"0003975"}}}


id: PBO:0082460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cadmium transporting P-type ATPase; may also have a role in copper and iron homeostasis; stabilized by Cd binding, which prevents ubiquitination; S288C and other lab strains contain a G970R mutation which eliminates Cd transport function","termid":"PBO:0082460"}


id: GO:0014013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gliogenesis, the formation of mature glia.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurogenesis","termid":"GO:0050767"},{"relation_name":"regulates","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gliogenesis","termid":"GO:0014013"}


id: PBO:0034504
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV_during_mitotic_S_phase","termid":"PBO:0034504"}


id: GO:0090088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide transport","termid":"GO:0090087"},{"relation_name":"regulates","term_name":"oligopeptide transport","termid":"GO:0006857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of oligopeptide transport","termid":"GO:0090088"}


id: PBO:0088282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar endopolyphosphatase","termid":"PBO:0088282"}


id: GO:0043803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: demethylspheroidene + S-adenosyl-L-methionine = H+ + S-adenosyl-L-homocysteine + spheroidene.","definition_xrefs":["RHEA:30903","PMID:12770713","PMID:7358679","PMID:12664193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"hydroxyneurosporene-O-methyltransferase activity","secondary_identifiers":["EC:2.1.1.210"],"synonyms":[{"name":"1-HO-carotenoid methylase","type":"related"},{"name":"1-hydroxycarotenoid O-methylase","type":"related"},{"name":"1-hydroxycarotenoid methylase","type":"related"},{"name":"demethylspheroidene O-methyltransferase","type":"related"}],"termid":"GO:0043803"}


id: PBO:0029023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-constitutive_protein_kinase_activity","termid":"PBO:0029023"}


id: PBO:0078633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIO and F-actin binding protein","termid":"PBO:0078633"}


id: PBO:0056260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MALT1 paracaspase","termid":"PBO:0056260"}


id: GO:0016108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetraterpenoid compounds, terpenoids with eight isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"tetraterpenoid metabolic process","synonyms":[{"name":"tetraterpene metabolic process","type":"narrow"},{"name":"tetraterpene metabolism","type":"narrow"},{"name":"tetraterpenoid metabolism","type":"exact"}],"termid":"GO:0016108"}


id: PBO:0049406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 2B","termid":"PBO:0049406"}


id: FYPO:0001831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoglycerate mutase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal phosphoglycerate mutase activity","termid":"FYPO:0001831"}


id: GO:0018604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-aminobenzoate + 2 H+ + O2 + 2 e- = NH3 + 3,4-dihydroxybenzoate.","definition_xrefs":["UM-BBD_reactionID:r0566"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-aminobenzoate 3,4-dioxygenase (deaminating) activity (obsolete GO:0018604)","termid":"GO:0018604"}


id: PR:Q9P6S0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mucin-22 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein 1742.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1742.01","secondary_identifiers":["UniProtKB:Q9P6S0"],"synonyms":[{"name":"Spom972h-MUC22","type":"exact"}],"termid":"PR:Q9P6S0"}


id: PBO:0030718
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_polysaccharide_level","termid":"PBO:0030718"}


id: PBO:0053565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 578","termid":"PBO:0053565"}


id: MONDO:0035821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypospadias","termid":"MONDO:0005345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated female hypospadias","secondary_identifiers":["UMLS:C5681495","MEDGEN:1842898","GARD:22434","Orphanet:603515"],"termid":"MONDO:0035821","xrefs":{"Monarch":{"xref_id":"0035821"}}}


id: GO:1905660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a mitotic checkpoint complex.","definition_xrefs":["PMID:26882497","GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"mitotic checkpoint complex assembly","synonyms":[{"name":"MCC assembly","type":"exact"},{"name":"MCC formation","type":"exact"},{"name":"mitotic checkpoint complex formation","type":"exact"}],"termid":"GO:1905660"}


id: MONDO:0003738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare dysgammaglobulinemia characterized by low or undetectable serum levels of immunoglobulin class E (IgE). It is an uncommon primary antibody deficiency. It is most likely an inherited immunodeficiency. It may be caused by decreased or inefficient class-switching from progenitor B cells without any corresponding decreases in the other isotypes. Most affected persons appear asymptomatic but may show a predisposition to autoimmune and respiratory diseases.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysgammaglobulinemia","termid":"MONDO:0001342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"selective IgE deficiency disease","secondary_identifiers":["ICD9:279.03","UMLS:C0398694","DOID:6024","MEDGEN:96020","SCTID:234540007","NCIT:C27143"],"synonyms":[{"name":"selective IgE immunodeficiency","type":"exact"},{"name":"selective immunoglobulin E deficiency","type":"exact"}],"termid":"MONDO:0003738","xrefs":{"Monarch":{"xref_id":"0003738"}}}


id: PBO:0014587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanol-dependent mutant protein Etd1","termid":"PBO:0014587"}


id: GO:0120186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein localization to chromatin.","definition_xrefs":["PMID:20889714","PMID:29899453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to chromatin","termid":"GO:1905634"},{"relation_name":"negatively_regulates","term_name":"protein localization to chromatin","termid":"GO:0071168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to chromatin","synonyms":[{"name":"negative regulation of protein localisation to chromatin","type":"exact"}],"termid":"GO:0120186"}


id: GO:0100018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates glucose import.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucose import by transcription from RNA polymerase II promoter (obsolete GO:0100018)","termid":"GO:0100018"}


id: PBO:0060429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleic acid binding protein 2","termid":"PBO:0060429"}


id: PBO:0071865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 3","termid":"PBO:0071865"}


id: GO:0061711
data:
  {"annotated_genes":["SJAG_00865","SJAG_04182"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58893,63956],"is_not":false,"summary":null,"term":"GO:0061711"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonylcarbamoyladenylate + adenine(37) in tRNA = AMP + N(6)-L-threonylcarbamoyladenine(37) in tRNA.","definition_xrefs":["EC:2.3.1.234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00865":null,"SJAG_04182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"N(6)-L-threonylcarbamoyladenine synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-6784494","MetaCyc:RXN-14570","RHEA:37059"],"termid":"GO:0061711","terms_by_termid":{"GO:0061711":null}}


id: MONDO:0018488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic odontal or periodontal disorder (obsolete MONDO:0018488)","secondary_identifiers":["Orphanet:420755"],"termid":"MONDO:0018488","xrefs":{"Monarch":{"xref_id":"0018488"}}}


id: PBO:0078219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 9","termid":"PBO:0078219"}


id: PBO:0051438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-22","termid":"PBO:0051438"}


id: MONDO:0850519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An amino acid metabolic disorder that are characterized phenotypically by hyperphenylalaninemia, depletion of the neurotransmitters dopamine and serotonin, and progressive cognitive and motor deficits and that has material basis in autosomal recessive mutations in the genes encoding enzymes involved in the synthesis or regeneration of BH4.","definition_xrefs":["DOID:0081132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"tetrahydrobiopterin (BH4)-deficient hyperphenylalaninemia","termid":"MONDO:0850519","xrefs":{"Monarch":{"xref_id":"0850519"}}}


id: GO:0019569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-arabinose into other compounds, including xylulose 5-phosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-arabinose catabolic process","termid":"GO:0019572"},{"relation_name":"is_a","term_name":"xylulose 5-phosphate biosynthetic process","termid":"GO:1901159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"L-arabinose catabolic process to xylulose 5-phosphate","secondary_identifiers":["MetaCyc:ARABCAT-PWY"],"synonyms":[{"name":"L-arabinose breakdown to xylulose 5-phosphate","type":"exact"},{"name":"L-arabinose degradation to xylulose 5-phosphate","type":"exact"}],"termid":"GO:0019569"}


id: PBO:0054568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1970","termid":"PBO:0054568"}


id: PBO:0077214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 9 superfamily member 5, pseudogene","termid":"PBO:0077214"}


id: MONDO:0015434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 18 syndrome is an autosomal anomaly characterized by variable clinical features, most commonly including hypotonia, neonatal feeding and respiratory difficulties, microcephaly, global developmental delay and intellectual disability, growth hormone deficiency, hypothyroidism, hearing loss, aural atresia, dysmorphic facial features and behavioral characteristics.","definition_xrefs":["Orphanet:1442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"},{"relation_name":"is_a","term_name":"chromosome 18 disorder","termid":"MONDO:0700125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 18","secondary_identifiers":["SCTID:88154004","GARD:6077","MESH:C538304","UMLS:C0265475","MEDGEN:539285","NORD:943"],"synonyms":[{"name":"Chromosome 18 Ring","type":"exact"},{"name":"R18","type":"related"},{"name":"Ring 18","type":"related"},{"name":"Ring chromosome 18 syndrome","type":"related"},{"name":"Ring chromosome type 18","type":"exact"},{"name":"chromosome 18 ring","type":"related"}],"termid":"MONDO:0015434","xrefs":{"Monarch":{"xref_id":"0015434"}}}


id: PBO:0004407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Pmh1","termid":"PBO:0004407"}


id: PATO:0000618
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's having two sides; two-sided.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral","termid":"PATO:0000618"}


id: MONDO:0021288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the hypopharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx carcinoma in situ","termid":"MONDO:0000372"},{"relation_name":"is_a","term_name":"hypopharyngeal carcinoma","termid":"MONDO:0005216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma in situ of hypopharynx","secondary_identifiers":["UMLS:C0347100","SCTID:92612007","icd11.foundation:591890094","MEDGEN:138078","NCIT:C9101"],"synonyms":[{"name":"carcinoma in situ of hypopharynx","type":"exact"},{"name":"carcinoma in situ of the hypopharynx","type":"exact"},{"name":"hypopharyngeal carcinoma in situ","type":"exact"},{"name":"hypopharynx carcinoma in situ","type":"exact"},{"name":"hypopharynx in situ carcinoma","type":"exact"},{"name":"stage 0 carcinoma of hypopharynx","type":"exact"},{"name":"stage 0 carcinoma of the hypopharynx","type":"exact"},{"name":"stage 0 hypopharyngeal cancer","type":"exact"},{"name":"stage 0 hypopharyngeal carcinoma","type":"exact"},{"name":"stage 0 hypopharyngeal carcinoma aJCC v6","type":"exact"},{"name":"stage 0 hypopharyngeal carcinoma aJCC v6, v7, and v8","type":"exact"},{"name":"stage 0 hypopharyngeal carcinoma aJCC v7","type":"exact"},{"name":"stage 0 hypopharyngeal carcinoma aJCC v8","type":"exact"},{"name":"stage 0 hypopharyngeal carcinoma in situ","type":"exact"},{"name":"stage 0 hypopharyngeal throat cancer","type":"exact"},{"name":"stage 0 hypopharynx carcinoma","type":"exact"}],"termid":"MONDO:0021288","xrefs":{"Monarch":{"xref_id":"0021288"}}}


id: PBO:0074401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 10","termid":"PBO:0074401"}


id: PBO:0116584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS16 antisense RNA 1","termid":"PBO:0116584"}


id: PATO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's having equal dimensions or measurements.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symmetry","termid":"PATO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isometrical","termid":"PATO:0001573"}


id: MONDO:1012411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"compulsive disorder, non-human animal","termid":"MONDO:1011636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compulsive disorder, dog","secondary_identifiers":["OMIA:001530-9615"],"termid":"MONDO:1012411","xrefs":{"Monarch":{"xref_id":"1012411"}}}


id: MONDO:0010746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thumbs, congenital Clasped","secondary_identifiers":["MEDGEN:98140","OMIM:314100","UMLS:C0431886"],"synonyms":[{"name":"Clasped thumbs, congenital","type":"related"},{"name":"adducted thumbs syndrome","type":"related"},{"name":"thumbs, congenital Clasped","type":"exact"}],"termid":"MONDO:0010746","xrefs":{"Monarch":{"xref_id":"0010746"}}}


id: SO:0001154
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of four consecutive peptide residues, of which the i+2 residue is proline, and that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth and is characterized by the dihedral angles: Residue(i+1): phi ~ -120 degrees, psi ~ 120 degrees. Residue(i+2): phi ~ -60 degrees, psi ~ 0 degrees.","definition_xrefs":["PMID:2371257","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn_type_six","termid":"SO:0001150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_type_six_b","synonyms":[{"name":"beta turn type six b","type":"exact"},{"name":"type VIb beta turn","type":"exact"},{"name":"type VIb turn","type":"exact"}],"termid":"SO:0001154"}


id: PBO:0078981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon TGA) 1-1","termid":"PBO:0078981"}


id: GO:1900911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of olefin biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"olefin biosynthetic process","termid":"GO:1900674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of olefin biosynthetic process","synonyms":[{"name":"regulation of olefin anabolism","type":"exact"},{"name":"regulation of olefin biosynthesis","type":"exact"},{"name":"regulation of olefin formation","type":"exact"},{"name":"regulation of olefin synthesis","type":"exact"}],"termid":"GO:1900911"}


id: PBO:0040556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9","termid":"PBO:0040556"}


id: PR:P46595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P46595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.02","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc4","type":"exact"},{"name":"ubiquitin carrier protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P46595"}


id: MOD:00790
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod - isotopic label ICPL method - The paper describes an H/D labeling strategy whereas the commercial product follows a C/13C labeling strategy. The digest is typically applied AFTER ICPL_light/heavy labeling, only Protein N-term labeling and Lys-specific labeling is applied.","definition_xrefs":["PubMed:15602776","URL:http://www.serva.de/products/sheets/39230-E.pdf","Unimod:365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form","type":"related"},{"name":"ICPL","type":"related"}],"termid":"MOD:00790"}


id: PBO:0017459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-hyperparasite_of","termid":"PBO:0017459"}


id: MONDO:0013743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of systemic lupus erythematosus (disease) that is caused by mutations in DNASE1L3.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autosomal systemic lupus erythematosus type 16","secondary_identifiers":["UMLS:C3280742","GARD:17368","MEDGEN:482372","OMIM:614420","Orphanet:300345"],"synonyms":[{"name":"SLEB16","type":"exact"},{"name":"autosomal SLE","type":"broad"},{"name":"familial SLE","type":"broad"},{"name":"familial systemic lupus erythematosus","type":"broad"},{"name":"systemic lupus erythematosus 16","type":"exact"},{"name":"systemic lupus erythematosus type 16","type":"exact"}],"termid":"MONDO:0013743","xrefs":{"Monarch":{"xref_id":"0013743"}}}


id: PBO:0028527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_centromere_central_core","termid":"PBO:0028527"}


id: PBO:0084790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins","termid":"PBO:0084790"}


id: PBO:0066621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIC1 homolog, RAB6A GEF complex partner 1","termid":"PBO:0066621"}


id: PR:Q9UUI8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GDP-fucose transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01987","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C22F8.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.04","secondary_identifiers":["UniProtKB:Q9UUI8"],"synonyms":[{"name":"Spom972h-SLC35C1","type":"exact"}],"termid":"PR:Q9UUI8"}


id: MONDO:0971095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyvalvular heart disease syndrome","termid":"MONDO:0016460"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 6","termid":"MONDO:0016905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"6q25.1 microdeletion syndrome","secondary_identifiers":["UMLS:C5925074","MEDGEN:1864381","Orphanet:664404"],"termid":"MONDO:0971095","xrefs":{"Monarch":{"xref_id":"0971095"}}}


id: PBO:0113108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; appears conserved and shows evidence of preservation by purifying selection within the Saccharomycotina subphylum; expression induced by iron-regulated transcriptional activator Aft2p","termid":"PBO:0113108"}


id: FYPO:0001793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell shows increased resistance to conditions that degrade the cell wall.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"resistant to cell wall digestion","synonyms":[{"name":"resistant to cell wall digestion during mitotic cell cycle","type":"related"},{"name":"resistant to cell wall digestion during vegetative growth","type":"exact"}],"termid":"FYPO:0001793"}


id: GO:0001890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin.","definition_xrefs":["GOC:add","ISBN:068340007X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"placenta development","synonyms":[{"name":"placental development","type":"exact"},{"name":"placentation","type":"exact"}],"termid":"GO:0001890"}


id: PBO:0034635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_forward_centromeric_outer_repeat_transcript_level","termid":"PBO:0034635"}


id: PBO:0071038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 40","termid":"PBO:0071038"}


id: PBO:0071558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 23","termid":"PBO:0071558"}


id: GO:1900797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cordyol C.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"cordyol C metabolic process","synonyms":[{"name":"cordyol C metabolism","type":"exact"}],"termid":"GO:1900797"}


id: PR:Q9USL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isoleucine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.08c","secondary_identifiers":["UniProtKB:Q9USL3"],"synonyms":[{"name":"IleRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IARS2","type":"exact"},{"name":"isoleucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USL3"}


id: PBO:0013754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FaScilin domain Containing","termid":"PBO:0013754"}


id: PBO:0040397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit F","termid":"PBO:0040397"}


id: PBO:0000652
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.22.-","termid":"PBO:0000652"}


id: GO:0099082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by a neuropeptide.","definition_xrefs":["PMID:19448629","GOC:dos","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling","termid":"GO:0098917"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by neuropeptide","termid":"GO:0099540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"}


id: PBO:0047703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin 2","termid":"PBO:0047703"}


id: GO:0022841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a potassium ion across a membrane via a narrow pore channel that is open even in an unstimulated or 'resting' state.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"leak channel activity","termid":"GO:0022840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"potassium ion leak channel activity","termid":"GO:0022841"}


id: PBO:0083879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric enterobactin transmembrane transporter; expressed under conditions of iron deprivation; member of the major facilitator superfamily; expression is regulated by Rcs1p and affected by chloroquine treatment","termid":"PBO:0083879"}


id: SO:0001500
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A biological_region characterized as a single heritable trait in a phenotype screen. The heritable phenotype may be mapped to a chromosome but generally has not been characterized to a specific gene locus.","definition_xrefs":["JAX:hdene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genetic_marker","termid":"SO:0001645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heritable_phenotypic_marker","synonyms":[{"name":"heritable phenotypic marker","type":"exact"},{"name":"phenotypic marker","type":"exact"}],"termid":"SO:0001500"}


id: MONDO:0009548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial primary hypomagnesemia with hypercalciuria and nephrocalcinosis with severe ocular involvement (FHHNCOI) is a form of familial primary hypomagnesemia (FPH), characterized by excessive magnesium and calcium renal wasting, bilateral nephrocalcinosis, progressive renal failure and severe ocular abnormalities.","definition_xrefs":["Orphanet:2196"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"oculocerebrorenal syndrome","termid":"MONDO:0010645"},{"relation_name":"is_a","term_name":"familial primary hypomagnesemia with hypercalciuria and nephrocalcinosis","termid":"MONDO:0017624"},{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240","MONDO:0005328"],"is_obsolete":false,"name":"renal hypomagnesemia 5 with ocular involvement","secondary_identifiers":["MESH:C536148","MEDGEN:1648449","OMIM:248190","UMLS:C4721891","GARD:3451","DOID:0060881"],"synonyms":[{"name":"FHHNC with severe ocular involvement","type":"exact"},{"name":"FHHNCOI","type":"exact"},{"name":"HOMG5","type":"related"},{"name":"Meier Blumberg Imahorn syndrome","type":"related"},{"name":"Meier-Blumberg-Imahorn syndrome","type":"exact"},{"name":"bilateral macular coloboma with hypercalciuria","type":"exact"},{"name":"familial hypomagnesemia with hypercalciuria, nephrocalcinosis and severe ocular involvement","type":"exact"},{"name":"familial primary hypomagnesemia with hypercalciuria and nephrocalcinosis with severe ocular involvement","type":"related"},{"name":"hypercalciuria-bilateral macular coloboma syndrome","type":"exact"},{"name":"hypomagnesemia 5, renal, with ocular involvement","type":"related"},{"name":"hypomagnesemia, familial, with hypercalciuria, nephrocalcinosis, and severe ocular involvement","type":"related"},{"name":"hypomagnesemia, renal, with ocular involvement","type":"related"},{"name":"idiopathic hypercalciuria with bilateral macular colobomata","type":"related"},{"name":"macular coloboma, bilateral, with hypercalciuria","type":"related"}],"termid":"MONDO:0009548","xrefs":{"Monarch":{"xref_id":"0009548"}}}


id: MONDO:0014032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any brachydactyly type A1 in which the cause of the disease is a mutation in the GDF5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"brachydactyly type A1","termid":"MONDO:0007215"},{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A1C","secondary_identifiers":["DOID:0110977","OMIM:615072","UMLS:C3554446","GARD:15903","MEDGEN:767360"],"synonyms":[{"name":"BDA1C","type":"exact"},{"name":"GDF5 brachydactyly type A1","type":"exact"},{"name":"brachydactyly type A1 caused by mutation in GDF5","type":"exact"},{"name":"brachydactyly, type A1, C","type":"related"}],"termid":"MONDO:0014032","xrefs":{"Monarch":{"xref_id":"0014032"}}}


id: PBO:0058582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6715b","termid":"PBO:0058582"}


id: GO:0072505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent inorganic anions within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete divalent inorganic anion homeostasis (obsolete GO:0072505)","termid":"GO:0072505"}


id: GO:1902834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proline import into cell.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24344203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"proline import across plasma membrane","termid":"GO:1905647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of proline import across plasma membrane","synonyms":[{"name":"regulation of proline import into cell","type":"exact"}],"termid":"GO:1902834"}


id: MONDO:0005786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the hepadnaviridae.","definition_xrefs":["MESH:D018347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hepadnaviridae infectious disease","secondary_identifiers":["MEDGEN:64649","UMLS:C0206746"],"synonyms":[{"name":"Hepadnaviridae caused disease or disorder","type":"exact"},{"name":"Hepadnaviridae disease or disorder","type":"exact"}],"termid":"MONDO:0005786","xrefs":{"Monarch":{"xref_id":"0005786"}}}


id: PBO:0069202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 456, pseudogene","termid":"PBO:0069202"}


id: PBO:0031819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_apoptosis","termid":"PBO:0031819"}


id: PBO:0068318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 19A, RBR E3 ubiquitin protein ligase","termid":"PBO:0068318"}


id: GO:0002299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of an alpha-beta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta intraepithelial T cell differentiation","synonyms":[{"name":"alpha-beta intraepithelial T cell development","type":"related"},{"name":"alpha-beta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"alpha-beta intraepithelial T-cell differentiation","type":"exact"},{"name":"alpha-beta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002299"}


id: GO:0070437
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Grb2 and the adaptor protein Shc, and is involved in linking epidermal growth factor receptor (EGFR) activation to the p21-Ras pathway.","definition_xrefs":["GOC:mah","PMID:7798267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Grb2-Shc complex","synonyms":[{"name":"Grb2-Shc complex, EGF stimulated","type":"narrow"}],"termid":"GO:0070437"}


id: MONDO:0044746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A bacterial infection that is transmitted from animals to people.","definition_xrefs":["NCIT:C35373"],"gene_count":0,"genotype_count":0,"name":"obsolete zoonotic bacterial infection (obsolete MONDO:0044746)","secondary_identifiers":["ICD10CM:A20-A28"],"synonyms":[{"name":"Bacteria caused zoonoses","type":"exact"},{"name":"Bacteria zoonoses","type":"exact"},{"name":"zoonotic bacterial disease","type":"exact"},{"name":"zoonotic bacterial infection","type":"exact"}],"termid":"MONDO:0044746","xrefs":{"Monarch":{"xref_id":"0044746"}}}


id: GO:0003864
data:
  {"annotated_genes":["SJAG_05200"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77853],"is_not":false,"summary":null,"term":"GO:0003864"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + 3-methyl-2-oxobutanoate = tetrahydrofolate + 2-dehydropantoate.","definition_xrefs":["EC:2.1.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-methyl-2-oxobutanoate hydroxymethyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:11824","MetaCyc:3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN"],"synonyms":[{"name":"5,10-methylene tetrahydrofolate:alpha-ketoisovalerate hydroxymethyltransferase activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate:3-methyl-2-oxobutanoate hydroxymethyltransferase activity","type":"related"},{"name":"alpha-ketoisovalerate hydroxymethyltransferase activity","type":"related"},{"name":"dehydropantoate hydroxymethyltransferase activity","type":"related"},{"name":"ketopantoate hydroxymethyltransferase activity","type":"related"},{"name":"oxopantoate hydroxymethyltransferase activity","type":"related"}],"termid":"GO:0003864","terms_by_termid":{"GO:0003864":null}}


id: PBO:0083105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase, potent G-quadruplex DNA binder/unwinder; possesses strand annealing activity; promotes DNA synthesis during break-induced replication; involved in crossover recombination; works with Hrq1p to maintain telomere length homeostasis; translation from different start sites produces mitochondrial (DNA repair and recombination) and nuclear (catalytic inhibitor of telomerase) forms; mutations affect Zn, Fe homeostasis; regulated by Rad53p-dependent phosphorylation in rho0 cells","termid":"PBO:0083105"}


id: GO:0102289
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-amyrin + 2 O2 + 2 NADPH + 2 H+ = 11-oxo-beta-amyrin + 3 H2O + 2 NADP.","definition_xrefs":["RHEA:31711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"beta-amyrin 11-oxidase activity","secondary_identifiers":["MetaCyc:RXN-12680","EC:1.14.14.152"],"termid":"GO:0102289"}


id: PBO:0047107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 156 member B","termid":"PBO:0047107"}


id: GO:0140737
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Intracellular non-membrane bound organelle, consisting of proteinaceous polyhedral shells that encapsulate enzymes, protecting the contents from their surrounding milieu and/or the milieu from reactants in their interior. The self-assembling, 25-42 nm nanocompartment shell, unlike larger bacterial microcompartments, is made of only one protein, and has only a few proteins inside. Shells about vary from about 25-42 nm in diameter. The shell protein has an HK97-like fold and probably evolved from a viral protein. Artificial encapsulin nanocompartments can be expressed and filled with cargo proteins for biotechnological uses. They are found in many bacterial and a few archaeal phyla.","definition_xrefs":["PMID:32918485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"encapsulin nanocompartment","synonyms":[{"name":"protein nanocompartment","type":"broad"}],"termid":"GO:0140737"}


id: FYPO:0003427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which one or more transfer RNA (tRNA) molecules contains fewer queuosine residues than normal.","definition_xrefs":["PomBase:mah","PMID:24911101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"decreased queuosine level in tRNA","synonyms":[{"name":"reduced queuosine content of tRNA","type":"exact"},{"name":"reduced queuosine level in tRNA","type":"exact"}],"termid":"FYPO:0003427"}


id: MOD:00930
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"tyrosine adduct with substrate analog inhibitor 1,2-dideoxy-2'-methyl-alpha-D-glucopyranoso-[2,1-d]-Delta2'-thiazoline.","definition_xrefs":["PubMed:15795231","Unimod:514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propyl-NAG tyrosine adduct","termid":"MOD:00930"}


id: PBO:0085482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable polyprenol reductase; catalyzes conversion of polyprenol to dolichol, the precursor for N-glycosylation; involved in filamentous growth; mutations in human homolog SRD5A3 confer CDG (Congenital Disorders of Glycosylation); human SRD5A3 can complement yeast null mutant","termid":"PBO:0085482"}


id: PBO:0078544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 36","termid":"PBO:0078544"}


id: PBO:0055989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and transmembrane domains 1","termid":"PBO:0055989"}


id: GO:0102285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-deoxy-11-oxopentalenate + O2 + NADPH + H+ = pentalenolactone D + H2O + NADP.","definition_xrefs":["RHEA:34635","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1-deoxy-11-oxopentalenate oxygenase activity","secondary_identifiers":["MetaCyc:RXN-12654","EC:1.14.13.170"],"termid":"GO:0102285"}


id: PBO:0087606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CoA-Synthesizing Protein Complex (CoA-SPC); subunits of this complex are: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p; probable dephospho-CoA kinase (DPCK) that catalyzes the last step in coenzyme A biosynthesis; involved in histone acylation; null mutant lethality is complemented by human homolog DCAKD and by E. coli coaE (encoding DPCK); detected in purified mitochondria in high-throughput studies; also localized to lipid droplets","termid":"PBO:0087606"}


id: GO:0047636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,2'-iminodipropanoate + H2O + NAD+ = L-alanine + H+ + NADH + pyruvate.","definition_xrefs":["RHEA:17589","EC:1.5.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alanopine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00398","MetaCyc:ALANOPINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"2,2'-iminodipropanoate:NAD+ oxidoreductase (L-alanine-forming)","type":"related"},{"name":"ADH","type":"related"},{"name":"ALPDH","type":"related"},{"name":"alanopine: NAD oxidoreductase activity","type":"related"},{"name":"alanopine:NAD oxidoreductase activity","type":"related"},{"name":"alanopine[meso-N-(1-carboxyethyl)-alanine]dehydrogenase activity","type":"related"},{"name":"meso-N-(1-carboxyethyl)-alanine:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047636"}


id: MONDO:0001434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondylitis","termid":"MONDO:0003937"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflammatory spondylopathy","secondary_identifiers":["DOID:12105","ICD9:720.9","SCTID:202649003","UMLS:C0949690","MEDGEN:215416","ICD9:720.81","ICD9:720.89"],"synonyms":[{"name":"inflammatory spondylopathies in disease EC","type":"exact"},{"name":"inflammatory spondylopathies in disease classified elsewhere","type":"narrow"},{"name":"inflammatory spondylopathy in disease classified elsewhere","type":"narrow"}],"termid":"MONDO:0001434","xrefs":{"Monarch":{"xref_id":"0001434"}}}


id: PBO:0049566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 2","termid":"PBO:0049566"}


id: MONDO:0100150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of the musculoskeletal system caused by pathogenic variants in the RYR1 gene, which encodes the ryanodine receptor type 1 protein. These variants are associated with a variety of overlapping features characterized by symmetric proximal muscle weakness, often with pronounced facial weakness with or without dysmorphism and ophthalmoparesis/ophthalmoplegia with ptosis, bulbar weakness, significant respiratory involvement, severe neonatal hypotonia, scoliosis, orthopedic deformities including arthrogryposis, hip dislocation, club feet, and King Denborough syndrome (pectus carinatum or excavatum, short stature, joint contractures, facial and skeletal deformities), malignant hyperthermia susceptibility, anesthesia-induced rhabdomyolysis, fatigue, exercise-induced hyperthermia/exertional heat stroke, and exertional myalgia. Histologic findings on skeletal muscle biopsy reveal a wide range of structural abnormalities and can include central core disease, multiminicore disease, cone-rod myopathy, centronuclear myopathy, and congenital fiber-type disproportion.","definition_xrefs":["PMID:30406384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"RYR1-related myopathy","synonyms":[{"name":"RYR1-related disease","type":"broad"},{"name":"RYR1-related disorder","type":"broad"},{"name":"RYR1-related myopathy","type":"exact"}],"termid":"MONDO:0100150","xrefs":{"Monarch":{"xref_id":"0100150"}}}


id: PBO:0036434
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Counteracter of CENP-A loading Protein","termid":"PBO:0036434"}


id: PBO:0030896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transport_phenotype_during_vegetative_growth","termid":"PBO:0030896"}


id: PBO:0062730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 4","termid":"PBO:0062730"}


id: GO:0150003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spontaneous synaptic transmission.","definition_xrefs":["GOC:bc","PMID:15457210","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"spontaneous synaptic transmission","termid":"GO:0098814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of spontaneous synaptic transmission","termid":"GO:0150003"}


id: MONDO:0020270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pigmentation disorder with eye involvement (obsolete MONDO:0020270)","secondary_identifiers":["Orphanet:98700"],"termid":"MONDO:0020270","xrefs":{"Monarch":{"xref_id":"0020270"}}}


id: MONDO:0009183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctional epidermolysis bullosa with pyloric atresia is a severe subtype of junctional epidermolysis bullosa (JEB) characterized by generalized blistering at birth and congenital atresia of the pylorus and rarely of other portions of the gastrointestinal tract.","definition_xrefs":["Orphanet:79403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"junctional epidermolysis bullosa with pyloric atresia","secondary_identifiers":["MEDGEN:1810975","DOID:0060733","icd11.foundation:1877890811","MESH:C535377","GARD:9694","UMLS:C5676875","OMIM:226730","NANDO:2201380"],"synonyms":[{"name":"Carmi syndrome","type":"exact"},{"name":"EB-Pa-ACC","type":"related"},{"name":"JEB-PA","type":"exact"},{"name":"JEB-Pa","type":"related"},{"name":"aplasia cutis congenita with gastrointestinal atresia","type":"related"},{"name":"epidermolysis bullosa JUNCTIONALIS with pyloric atresia","type":"related"},{"name":"epidermolysis bullosa junctionalis with pyloric atresia","type":"exact"},{"name":"epidermolysis bullosa with pyloric atresia","type":"related"},{"name":"epidermolysis bullosa, junctional, with pyloric atresia","type":"related"},{"name":"epidermolysis bullosa, junctional, with pyloric atresia and aplasia cutis congenita","type":"related"},{"name":"epidermolysis bullosa, junctional, with pyloric stenosis","type":"exact"},{"name":"junctional epidermolysis bullosa - pyloric atresia","type":"related"},{"name":"junctional epidermolysis bullosa with pyloric atresia","type":"exact"},{"name":"junctional epidermolysis bullosa-pyloric atresia syndrome","type":"exact"}],"termid":"MONDO:0009183","xrefs":{"Monarch":{"xref_id":"0009183"}}}


id: MONDO:0003272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed epithelial stromal tumor","secondary_identifiers":["NCIT:C37265","DOID:5088"],"synonyms":[{"name":"mixed epithelial stromal tumor","type":"exact"}],"termid":"MONDO:0003272","xrefs":{"Monarch":{"xref_id":"0003272"}}}


id: MONDO:0000342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with O'nyong-nyong virus.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alphavirus infectious disease","termid":"MONDO:0005643"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O'nyong'nyong fever","secondary_identifiers":["MEDGEN:547234","DOID:0050516","SCTID:85579005","ICD10CM:A92.1","UMLS:C0276286"],"synonyms":[{"name":"O'nyong-nyong virus caused disease or disorder","type":"exact"},{"name":"O'nyong-nyong virus disease or disorder","type":"exact"},{"name":"O'nyong-nyong virus infectious disease","type":"exact"}],"termid":"MONDO:0000342","xrefs":{"Monarch":{"xref_id":"0000342"}}}


id: GO:0071224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptidoglycan","termid":"GO:0032494"},{"relation_name":"is_a","term_name":"cellular response to molecule of bacterial origin","termid":"GO:0071219"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to peptidoglycan","termid":"GO:0071224"}


id: PBO:0038528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 2, acylglycerol lipase","termid":"PBO:0038528"}


id: PR:O94411
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug55 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic fizzy-related protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.04c","synonyms":[{"name":"Spom972h-mug55","type":"exact"},{"name":"meiotically up-regulated gene 55 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94411"}


id: PBO:0031419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_S-phase_DNA_damage_checkpoint","termid":"PBO:0031419"}


id: MOD:01497
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ4plex-115 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-115 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex115","type":"related"}],"termid":"MOD:01497"}


id: GO:0015714
data:
  {"annotated_genes":["SJAG_01960","SJAG_00276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93685,76955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990536"}]},"cv_name":"biological_process","definition":"The directed movement of phosphoenolpyruvate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"phosphoenolpyruvate transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015714","terms_by_termid":{"GO:1990536":null}}


id: PBO:0028457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_morphology","termid":"PBO:0028457"}


id: MONDO:0009934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare and fatal developmental lung disease characterized by respiratory distress in neonates due to refractory hypoxemia and severe pulmonary arterial hypertension.","definition_xrefs":["Orphanet:210122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary interstitial lung disease specific to childhood","termid":"MONDO:0017015"},{"relation_name":"is_a","term_name":"congenital pulmonary veins anomaly","termid":"MONDO:0020295"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"alveolar capillary dysplasia with misalignment of pulmonary veins","secondary_identifiers":["OMIM:265380","ICD9:747.49","ICD9:747.83","GARD:8644","NCIT:C98809","NORD:759","SCTID:447275002","SCTID:233815004","DOID:13042","MEDGEN:755478","MedDRA:10054726","NCIT:C85006","UMLS:C2960310","MESH:C536590"],"synonyms":[{"name":"ACDMPV","type":"exact"},{"name":"alveolar capillary dysplasia","type":"exact"},{"name":"alveolar capillary dysplasia with misalignment of pulmonary veins","type":"exact"},{"name":"alveolar capillary dysplasia with misalignment of pulmonary veins and Other congenital anomalies","type":"related"},{"name":"alveolar capillary dysplasia with misalignment of pulmonary veins and other congenital anomalies","type":"related"},{"name":"alveolar capillary dysplasia with misalignment of pulmonary vessels","type":"exact"},{"name":"alveolar capillary dysplasia with pulmonary venous misalignment","type":"related"},{"name":"congenital alveolar capillary dysplasia","type":"exact"},{"name":"congenital alveolar capillary dysplasia with misalignment of pulmonary veins","type":"exact"},{"name":"familial persistent pulmonary hypertension of the newborn","type":"related"},{"name":"fetal circulation","type":"exact"},{"name":"foetal circulation","type":"exact"},{"name":"persistent fetal circulation","type":"related"},{"name":"persistent foetal circulation","type":"related"},{"name":"persistent foetal circulation syndrome","type":"related"},{"name":"persistent pulmonary hypertension of the newborn","type":"related"},{"name":"pulmonary hypertension, familial persistent of the newborn","type":"related"}],"termid":"MONDO:0009934","xrefs":{"Monarch":{"xref_id":"0009934"}}}


id: PBO:0077504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 221","termid":"PBO:0077504"}


id: GO:0061568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into GDP, guanosine diphosphate, to produce GTP.","definition_xrefs":["GOC:dph","PMID:23416111"],"gene_count":0,"genotype_count":0,"name":"obsolete GDP phosphorylation (obsolete GO:0061568)","termid":"GO:0061568"}


id: PBO:0034389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_potential_to_directly_develop_into","termid":"PBO:0034389"}


id: PBO:0063892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class Q","termid":"PBO:0063892"}


id: GO:0018789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexylsulfamate + H2O = cyclohexylamine + sulfate.","definition_xrefs":["EC:3.10.1.2","RHEA:18481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid sulfur-nitrogen bonds","termid":"GO:0016826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyclamate sulfohydrolase activity","secondary_identifiers":["MetaCyc:CYCLAMATE-SULFOHYDROLASE-RXN","UM-BBD_reactionID:r0755","KEGG_REACTION:R02564"],"synonyms":[{"name":"cyclamate sulfamatase activity","type":"exact"},{"name":"cyclamate sulfamidase activity","type":"related"},{"name":"cyclamate sulphohydrolase activity","type":"exact"},{"name":"cyclohexylsulfamate sulfamidase activity","type":"related"},{"name":"cyclohexylsulfamate sulfohydrolase activity","type":"related"}],"termid":"GO:0018789"}


id: PATO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A peramorphic growth quality which is due to an increased rate.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peramorphic growth","termid":"PATO:0001752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accelerated growth","termid":"PATO:0001753"}


id: MONDO:0005694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the cecum. Representative examples of benign neoplasms include lipoma and leiomyoma. Representative examples of malignant neoplasms include carcinoma, lymphoma, and sarcoma. Cecal adenomas always exhibit epithelial dysplasia and are considered premalignant neoplasms.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cecal disorder","termid":"MONDO:0002031"},{"relation_name":"is_a","term_name":"colonic neoplasm","termid":"MONDO:0005401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cecal neoplasm","secondary_identifiers":["UMLS:C0007528","MEDGEN:2922","NCIT:C4433","DOID:1517","SCTID:126839008","MESH:D002430","EFO:0009255"],"synonyms":[{"name":"caecum neoplasm","type":"exact"},{"name":"caecum neoplasm (disease)","type":"exact"},{"name":"caecum tumor","type":"exact"},{"name":"caecum tumour","type":"exact"},{"name":"cecal benign neoplasm","type":"related"},{"name":"cecum neoplasm","type":"exact"},{"name":"cecum tumor","type":"exact"},{"name":"cecum tumour","type":"exact"},{"name":"neoplasm of caecum","type":"exact"},{"name":"neoplasm of cecum","type":"exact"},{"name":"neoplasm of the cecum","type":"exact"},{"name":"tumor of caecum","type":"exact"},{"name":"tumor of cecum","type":"exact"},{"name":"tumor of the cecum","type":"exact"},{"name":"tumour of caecum","type":"exact"},{"name":"tumour of cecum","type":"exact"},{"name":"tumour of the cecum","type":"exact"}],"termid":"MONDO:0005694","xrefs":{"Monarch":{"xref_id":"0005694"}}}


id: PBO:0058416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4785","termid":"PBO:0058416"}


id: MONDO:0016421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Toxic oil syndrome is a rare intoxication, due to consumption of a rapeseed oil denatured with aniline 2%, characterized by generalized vascular lesions affecting all organs and vessels (including veins and arteries) and presenting with severe incapacitating myalgias, marked peripheral eosinophilia and pulmonary infiltrates.","definition_xrefs":["Orphanet:227972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic oil syndrome","secondary_identifiers":["SCTID:239910001","MedDRA:10051222","GARD:20566"],"termid":"MONDO:0016421","xrefs":{"Monarch":{"xref_id":"0016421"}}}


id: PR:P30261
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P30261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.02c","synonyms":[{"name":"Spom972h-cdc27","type":"exact"},{"name":"cell division control protein 27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30261"}


id: PBO:0073420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seizure related 6 homolog like","termid":"PBO:0073420"}


id: PBO:0080518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family member 4, pseudogene","termid":"PBO:0080518"}


id: PBO:0070521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 20","termid":"PBO:0070521"}


id: PBO:0058877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10393","termid":"PBO:0058877"}


id: MONDO:0008301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Guttmacher syndrome is an extremely rare syndrome characterized by hypoplastic thumbs and halluces, 5th finger clinobrachydactyly, postaxial polydactyly of the hands, short or uniphalangeal 2nd toes with absent nails and hypospadias.","definition_xrefs":["Orphanet:2957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guttmacher syndrome","secondary_identifiers":["OMIM:176305","SCTID:722452004","MESH:C538278","DOID:0111544","MEDGEN:401304","UMLS:C1867801","GARD:4470"],"synonyms":[{"name":"Guttmacher syndrome","type":"exact"},{"name":"autosomal dominant preaxial deficiency, postaxial polydactyly, and hypospadias","type":"related"},{"name":"preaxial deficiency, postaxial polydactyly and hypospadias","type":"related"},{"name":"preaxial deficiency, postaxial polydactyly, and hypospadias","type":"related"},{"name":"preaxial deficiency-postaxial polydactyly-hypospadias syndrome","type":"exact"}],"termid":"MONDO:0008301","xrefs":{"Monarch":{"xref_id":"0008301"}}}


id: PBO:0002767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINT/PCI domain","termid":"PBO:0002767"}


id: PBO:0060494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylneuraminate synthase","termid":"PBO:0060494"}


id: GO:0009734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by the binding of the plant hormone auxin to a receptor, and ending with modulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:18647826","GOC:mah","PMID:16990790","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to auxin stimulus","termid":"GO:0071365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"auxin-activated signaling pathway","synonyms":[{"name":"auxin mediated signaling pathway","type":"related"},{"name":"auxin mediated signalling","type":"exact"},{"name":"auxin signal transduction","type":"exact"},{"name":"auxin signaling","type":"exact"},{"name":"auxin-regulated transcription","type":"related"}],"termid":"GO:0009734"}


id: MONDO:0020390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal origin of the pulmonary artery","termid":"MONDO:0015239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary artery coming from patent ductus arteriosus","secondary_identifiers":["MEDGEN:756326","Orphanet:99049","GARD:19619","UMLS:C3163916"],"termid":"MONDO:0020390","xrefs":{"Monarch":{"xref_id":"0020390"}}}


id: PBO:0045335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK9 antisense RNA 1","termid":"PBO:0045335"}


id: GO:1990770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry in the intestine between the stomach and the large intestine.","definition_xrefs":["PMID:11991626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"},{"relation_name":"part_of","term_name":"intestine smooth muscle contraction","termid":"GO:0014827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"small intestine smooth muscle contraction","termid":"GO:1990770"}


id: PBO:0045480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmocollin 2","termid":"PBO:0045480"}


id: FYPO:0009019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which the poportion of cells with two nuclei is higher than normal.","definition_xrefs":["PMID:34984977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"increased vegetative cell population binucleate index","synonyms":[{"name":"higher proportion of binucleate cells during vegetative growth","type":"exact"},{"name":"more cells with two nuclei during vegetative growth","type":"exact"}],"termid":"FYPO:0009019"}


id: PBO:0058196
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4489","termid":"PBO:0058196"}


id: GO:0090359
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of abscisic acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of abscisic acid biosynthetic process","termid":"GO:0010115"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"abscisic acid biosynthetic process","termid":"GO:0009688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of abscisic acid biosynthetic process","synonyms":[{"name":"negative regulation of abscisic acid biosynthesis","type":"exact"}],"termid":"GO:0090359"}


id: GO:0030330
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction in response to DNA damage","termid":"GO:0042770"},{"relation_name":"is_a","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"DNA damage response, signal transduction by p53 class mediator","secondary_identifiers":["GO:0006976"],"synonyms":[{"name":"DNA damage response, activation of p53","type":"related"},{"name":"TP53 signaling pathway","type":"related"},{"name":"p53 signaling pathway","type":"related"},{"name":"p53-mediated DNA damage response","type":"broad"}],"termid":"GO:0030330"}


id: MONDO:0012926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the MMP20 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 2","termid":"MONDO:0015048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta hypomaturation type 2A2","secondary_identifiers":["GARD:15563","UMLS:C2675858","DOID:0110060","OMIM:612529","MEDGEN:436540","MESH:C567279"],"synonyms":[{"name":"AI2A2","type":"exact"},{"name":"MMP20 amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in MMP20","type":"exact"},{"name":"amelogenesis imperfecta hypomaturation type IIA2","type":"exact"},{"name":"amelogenesis imperfecta pigmented hypomaturation type 2","type":"exact"},{"name":"amelogenesis imperfecta type IIA2","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIA2","type":"related"},{"name":"amelogenesis imperfecta, pigmented hypomaturation type, 2","type":"related"},{"name":"amelogenesis imperfecta, type IIA2","type":"exact"}],"termid":"MONDO:0012926","xrefs":{"Monarch":{"xref_id":"0012926"}}}


id: PBO:0089646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras GEF Ste6","termid":"PBO:0089646"}


id: GO:0052475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the cell mediated immune response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont cell-mediated immune response (obsolete GO:0052475)","synonyms":[{"name":"negative regulation by organism of symbiont cell-based immune response","type":"exact"},{"name":"negative regulation by organism of symbiont cell-mediated immune response","type":"exact"}],"termid":"GO:0052475"}


id: PBO:0038994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen dependent TFPI regulating protein","termid":"PBO:0038994"}


id: PBO:0065514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein prenyltransferase alpha subunit repeat containing 1","termid":"PBO:0065514"}


id: PBO:0017861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght4","termid":"PBO:0017861"}


id: GO:0045159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class II myosin, any member of the class of 'conventional' double-headed myosins that includes muscle myosin.","definition_xrefs":["GOC:mah","PMID:27697842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0008092","GO:0003674"],"is_obsolete":false,"name":"myosin II binding","termid":"GO:0045159"}


id: GO:0048285
data:
  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id: PBO:0087566
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of succinate dehydrogenase and of TIM22 translocase; functions as cytochrome b subunit of succinate dehydrogenase, which couples oxidation of succinate to transfer of electrons to ubiquinone as part of the TCA cycle and the mitochondrial respiratory chain; also required for mitochondrial inner membrane protein import as part of the TIM22 complex; SDH3 has a paralog, SHH3, that arose from the whole genome duplication","termid":"PBO:0087566"}


id: GO:0051555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavonols, a member of a class of vascular pigments formed by consecutive oxidative processes from the flavonoid intermediates flavanones and dihydroflavonols. Flavonols are the most widespread of the flavonoids and have a wide array of physiological activities.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone biosynthetic process","termid":"GO:0051553"},{"relation_name":"is_a","term_name":"flavonol metabolic process","termid":"GO:0051554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonol biosynthetic process","secondary_identifiers":["MetaCyc:PWY-3101"],"termid":"GO:0051555"}


id: PBO:0049911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexosaminidase D","termid":"PBO:0049911"}


id: MONDO:0859306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay with variable intellectual disability and dysmorphic facies","secondary_identifiers":["MEDGEN:1824015","OMIM:620098","UMLS:C5774242"],"termid":"MONDO:0859306","xrefs":{"Monarch":{"xref_id":"0859306"}}}


id: MONDO:0021189
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703","SJAG_01665","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86896,86897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0025708"},{"annotations":[86900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030296"},{"annotations":[86691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030329"},{"annotations":[87258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013452"},{"annotations":[86892,86893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859157"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of intestinal motility.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01665":null,"SJAG_02431":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal motility disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:586448","UMLS:C0400865"],"synonyms":[{"name":"disorder of intestinal motility","type":"exact"}],"termid":"MONDO:0021189","terms_by_termid":{"MONDO:0013452":null,"MONDO:0025708":null,"MONDO:0030296":null,"MONDO:0030329":null,"MONDO:0859157":null},"xrefs":{"Monarch":{"xref_id":"0021189"}}}


id: PBO:0082272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Amphiphysin-like lipid raft protein; N-BAR domain protein that interacts with Rvs167p and regulates polarization of the actin cytoskeleton, endocytosis, cell polarity, cell fusion and viability following starvation or osmotic stress","termid":"PBO:0082272"}


id: PBO:0074531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA E","termid":"PBO:0074531"}


id: MONDO:0011516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early response to neural induction gene","secondary_identifiers":["MEDGEN:344332","OMIM:605105","UMLS:C1854633"],"synonyms":[{"name":"Erni","type":"related"},{"name":"early response to neural induction gene","type":"exact"}],"termid":"MONDO:0011516","xrefs":{"Monarch":{"xref_id":"0011516"}}}


id: PBO:0078474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotropin releasing hormone degrading enzyme","termid":"PBO:0078474"}


id: PR:O13713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nab2 gene.","definition_xrefs":["UniProtKB:O13713","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear polyadenylated RNA-binding protein nab2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.06c","synonyms":[{"name":"Spom972h-nab2","type":"exact"}],"termid":"PR:O13713"}


id: GO:0140453
data:
  {"annotated_genes":["SJAG_04055","SJAG_04666","SJAG_01186","SJAG_03164","SJAG_02013","SJAG_03815","SJAG_02381","SJAG_01529","SJAG_01664","SJAG_04187","SJAG_00436","SJAG_04567","SJAG_03794"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91150,92757,95371,96861,101028,104519,105315,110308,110309,115799,115800,117017,118880],"is_not":false,"summary":null,"term":"GO:0140453"}]},"cv_name":"cellular_component","definition":"Reversible aggregate of misfolded proteins and chaperones formed to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00436":null,"SJAG_01186":null,"SJAG_01529":null,"SJAG_01664":null,"SJAG_02013":null,"SJAG_02381":null,"SJAG_03164":null,"SJAG_03794":null,"SJAG_03815":null,"SJAG_04055":null,"SJAG_04187":null,"SJAG_04567":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"protein aggregate center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PAC","type":"broad"},{"name":"protein aggregate centre","type":"exact"}],"termid":"GO:0140453","terms_by_termid":{"GO:0140453":null}}


id: MONDO:0014746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"SLC39A8-CDG","secondary_identifiers":["GARD:17846","DOID:0070266","MEDGEN:899837","OMIM:616721","Orphanet:468699","UMLS:C4225234"],"synonyms":[{"name":"CDG IIn","type":"related"},{"name":"CDG syndrome type IIn","type":"exact"},{"name":"CDG-IIn","type":"exact"},{"name":"CDG2N","type":"exact"},{"name":"SLC39A8 deficiency","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIn","type":"exact"},{"name":"congenital disorder of glycosylation type 2n","type":"exact"},{"name":"congenital disorder of glycosylation type IIn","type":"exact"},{"name":"congenital disorder of glycosylation, type IIn","type":"exact"}],"termid":"MONDO:0014746","xrefs":{"Monarch":{"xref_id":"0014746"}}}


id: GO:0061514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-34 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:18467591","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-34-mediated signaling pathway","termid":"GO:0061514"}


id: MONDO:0015966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary eye tumor (obsolete MONDO:0015966)","secondary_identifiers":["Orphanet:183619"],"synonyms":[{"name":"genetic eye tumor","type":"related"}],"termid":"MONDO:0015966","xrefs":{"Monarch":{"xref_id":"0015966"}}}


id: MONDO:1010976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Huntington disease that occurs in Rhesus monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease, non-human animal","termid":"MONDO:1010231"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huntington disease, Rhesus monkey","secondary_identifiers":["OMIA:000485-9544"],"termid":"MONDO:1010976","xrefs":{"Monarch":{"xref_id":"1010976"}}}


id: PBO:0057826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3145","termid":"PBO:0057826"}


id: GO:0050036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonate + NAD+ = 3-dehydro-L-threonate + H+ + NADH.","definition_xrefs":["RHEA:23376","EC:1.1.1.129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-threonate 3-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03733","MetaCyc:L-THREONATE-3-DEHYDROGENASE-RXN"],"synonyms":[{"name":"L-threonate:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"L-threonic acid dehydrogenase activity","type":"related"},{"name":"threonate dehydrogenase activity","type":"related"}],"termid":"GO:0050036"}


id: MONDO:0100355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A classic (severe) or non-classic (mild or intermediate) form of a genetic disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"classic or non-classic genetic disease presentation","termid":"MONDO:0100355","xrefs":{"Monarch":{"xref_id":"0100355"}}}


id: MONDO:0016641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"limb transversal defect-cardiac anomaly syndrome","secondary_identifiers":["UMLS:C2931047","MESH:C535856","Orphanet:2492","MEDGEN:419705"],"synonyms":[{"name":"Hecht-Scott syndrome","type":"exact"}],"termid":"MONDO:0016641","xrefs":{"Monarch":{"xref_id":"0016641"}}}


id: PBO:0080741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWTR1 intronic transcript 1","termid":"PBO:0080741"}


id: GO:1905431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a microcystin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:26055554","GO_REF:0000065","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"microcystin transport","termid":"GO:1905431"}


id: PBO:0116785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YAP1 divergent transcript","termid":"PBO:0116785"}


id: SO:0000633
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA with either a single protein product, or for which the regions encoding all its protein products overlap.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"monocistronic","termid":"SO:0000878"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"},{"relation_name":"is_a","term_name":"monocistronic_transcript","termid":"SO:0000665"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocistronic_mRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Monocistronic_mRNA"],"synonyms":[{"name":"monocistronic mRNA","type":"exact"},{"name":"monocistronic processed transcript","type":"exact"}],"termid":"SO:0000633"}


id: PBO:0055509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2943","termid":"PBO:0055509"}


id: PBO:0058431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4801","termid":"PBO:0058431"}


id: MONDO:0020728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypouricemia, renal","termid":"MONDO:0968951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hypouricemia, renal 1","secondary_identifiers":["UMLS:C0473219","MEDGEN:141632","OMIM:220150"],"synonyms":[{"name":"Dalmatian hypouricemia","type":"related"},{"name":"RHUC1","type":"related"},{"name":"hypouricemia, renal, 1","type":"related"},{"name":"hypouricemia, renal, type 1","type":"related"},{"name":"renal hypouricemia","type":"related"}],"termid":"MONDO:0020728","xrefs":{"Monarch":{"xref_id":"0020728"}}}


id: MONDO:0020173
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A benign neoplasm that involves the skin of eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palpebral epidermal tumor","termid":"MONDO:0020172"},{"relation_name":"is_a","term_name":"benign eyelid neoplasm","termid":"MONDO:0021605"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"benign tumor of palpebral epidermis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:98582"],"synonyms":[{"name":"skin of eyelid benign neoplasm","type":"exact"}],"termid":"MONDO:0020173","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0020173"}}}


id: MONDO:0014390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypotrichosis in which the cause of the disease is a mutation in the KRT71 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"isolated familial wooly hair disorder","termid":"MONDO:0008686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 13","secondary_identifiers":["GARD:16029","DOID:0110710","MEDGEN:863053","OMIM:615896","UMLS:C4014616"],"synonyms":[{"name":"HYPT13","type":"exact"},{"name":"KRT71 hypotrichosis","type":"exact"},{"name":"hypotrichosis 13","type":"exact"},{"name":"hypotrichosis caused by mutation in KRT71","type":"exact"},{"name":"hypotrichosis type 13","type":"exact"},{"name":"hypotrichosis with woolly hair","type":"exact"},{"name":"hypotrichosis with wooly hair","type":"exact"},{"name":"hypt13","type":"exact"}],"termid":"MONDO:0014390","xrefs":{"Monarch":{"xref_id":"0014390"}}}


id: PR:Q9USH8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glucosidase 2 subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04545","PRO:DNx","PANTHER:PTHR12630:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase 2 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.02","secondary_identifiers":["UniProtKB:Q9USH8"],"synonyms":[{"name":"Spom972h-PRKCSH","type":"exact"},{"name":"alpha-glucosidase 2 subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USH8"}


id: GO:0097379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a dorsal spinal cord interneuron is directed to a specific target site in the posterior direction along the anterior-posterior body axis in response to a combination of attractive and repulsive cues. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.","definition_xrefs":["GOC:yaf","PMID:19545367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior axon guidance","termid":"GO:0033564"},{"relation_name":"is_a","term_name":"dorsal spinal cord interneuron axon guidance","termid":"GO:0097378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal spinal cord interneuron posterior axon guidance","synonyms":[{"name":"dorsal interneuron caudal axon projection","type":"related"}],"termid":"GO:0097379"}


id: MONDO:0001925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal dystrophy in systemic or cerebroretinal lipidoses","secondary_identifiers":["DOID:14253","UMLS:C0154861","SCTID:15059000","SCTID:192788009","ICD9:362.71","MEDGEN:1843490"],"termid":"MONDO:0001925","xrefs":{"Monarch":{"xref_id":"0001925"}}}


id: MONDO:0011478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth and developintellectual disability, ocular ptosis, cardiac defect, and anal atresia","secondary_identifiers":["UMLS:C1858182","MEDGEN:346757","OMIM:604690","MESH:C565755"],"synonyms":[{"name":"Roca syndrome","type":"related"},{"name":"Roca-Weidemann syndrome","type":"related"},{"name":"growth and developintellectual disability, ocular ptosis, cardiac defect, and anal atresia","type":"exact"},{"name":"growth and developmental retardation, ocular ptosis, cardiac defect, and anal atresia","type":"exact"}],"termid":"MONDO:0011478","xrefs":{"Monarch":{"xref_id":"0011478"}}}


id: PBO:0046107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E","termid":"PBO:0046107"}


id: PBO:0055945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 53","termid":"PBO:0055945"}


id: PBO:0085666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nucleolar integrity and processing of pre-rRNA; has a role in processing rRNA for the 60S ribosome subunit; transcript is induced in response to cytotoxic stress but not genotoxic stress; relocalizes from nucleus to nucleolus upon DNA replication stress","termid":"PBO:0085666"}


id: GO:0051675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of pullulan to isopanose (6-alpha-maltosylglucose).","definition_xrefs":["EC:3.2.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"isopullulanase activity","secondary_identifiers":["MetaCyc:3.2.1.57-RXN"],"synonyms":[{"name":"pullulan 4-glucanohydrolase (isopanose-forming) activity","type":"exact"}],"termid":"GO:0051675"}


id: GO:1903359
data:
  {"annotated_genes":["SJAG_00596","SJAG_04947"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100411,104846],"is_not":false,"summary":null,"term":"GO:1903359"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a lateral cortical node.","definition_xrefs":["GOC:TermGenie","PMID:25009287","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"lateral cortical node assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Skb1-containing cortical node assembly","type":"exact"},{"name":"Skb1-containing cortical node formation","type":"exact"},{"name":"lateral cortical node formation","type":"exact"}],"termid":"GO:1903359","terms_by_termid":{"GO:1903359":null}}


id: MONDO:0054861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 63","secondary_identifiers":["DOID:0081224","GARD:16475","OMIM:618095","UMLS:C4748167","MEDGEN:1648348"],"synonyms":[{"name":"MRT63","type":"related"},{"name":"intellectual disability, autosomal recessive 63","type":"exact"},{"name":"mental retardation, autosomal recessive 63","type":"related"}],"termid":"MONDO:0054861","xrefs":{"Monarch":{"xref_id":"0054861"}}}


id: PBO:0088660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 7, Pre10","termid":"PBO:0088660"}


id: MONDO:0024609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive squamous cell carcinoma arising from the vulva. Risk factors include the human papilloma virus and cigarette smoking. Precursor lesions include the vulvar intraepithelial neoplasia, lichen sclerosus with associated squamous cell hyperplasia, and chronic granulomatous vulvar disease such as granuloma inguinale. Symptoms include vulvar pruritus or irritation, discharge, bleeding, and pain. The following morphologic variants have been identified: keratinizing, non-keratinizing, basaloid, warty, verrucous, keratoacanthoma-like, and squamous cell carcinoma with tumor giant cells. Risk factors for recurrence include advanced stage, tumor diameter greater than 2.5 cm, multifocality, capillary-like space involvement, associated vulvar intraepithelial neoplasia grades 2 or 3, and margins of resection involved by tumor. (WHO, 2003)","definition_xrefs":["NCIT:C4052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar squamous neoplasm","termid":"MONDO:0002195"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"vulvar carcinoma","termid":"MONDO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar squamous cell carcinoma","secondary_identifiers":["UMLS:C0280856","EFO:1000624","MEDGEN:79201","Orphanet:494448","GARD:22005","SCTID:254895003","icd11.foundation:146824338","DOID:2101"],"synonyms":[{"name":"epidermoid carcinoma of the vulva","type":"exact"},{"name":"epidermoid carcinoma of vulva","type":"exact"},{"name":"epidermoid cell carcinoma of the vulva","type":"exact"},{"name":"epidermoid cell carcinoma of vulva","type":"exact"},{"name":"mammalian vulva squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of the vulva","type":"exact"},{"name":"squamous cell carcinoma of vulva","type":"exact"},{"name":"vulva epidermoid carcinoma","type":"exact"},{"name":"vulva epidermoid cell carcinoma","type":"exact"},{"name":"vulva squamous cell carcinoma","type":"exact"},{"name":"vulvar epidermoid carcinoma","type":"exact"},{"name":"vulvar epidermoid cell carcinoma","type":"exact"},{"name":"vulvar squamous cell cancer","type":"exact"},{"name":"vulvar squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0024609","xrefs":{"Monarch":{"xref_id":"0024609"}}}


id: PBO:0044699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 pseudogene 2","termid":"PBO:0044699"}


id: MONDO:0006692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system disorder caused by demyelination within the central basis pontis of the brain. It is characterized by spastic quadriplegia, pseudobulbar palsy and encephalopathy. It is observed in patients with severe hyponatremia, particularly when the hyponatremia is corrected too rapidly.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"central pontine myelinolysis","secondary_identifiers":["DOID:636","ICD10CM:G37.2","ICD9:341.8","MedDRA:10007968","MEDGEN:64511","MESH:D017590","SCTID:6807001","icd11.foundation:558060012","NCIT:C84623","EFO:1000857","UMLS:C0206083"],"synonyms":[{"name":"osmotic demyelination syndrome","type":"exact"}],"termid":"MONDO:0006692","xrefs":{"Monarch":{"xref_id":"0006692"}}}


id: PBO:0077073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIA1 cytotoxic granule associated RNA binding protein","termid":"PBO:0077073"}


id: PBO:0083889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of nuclear pore complex (NPC); contributes directly to nucleocytoplasmic transport; induces membrane tubulation, which may contribute to nuclear pore assembly; ASM4 has a paralog, NUP53, that arose from the whole genome duplication","termid":"PBO:0083889"}


id: PBO:0017650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seh1-associated complex subunit Seh1","termid":"PBO:0017650"}


id: PBO:0050013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, A","termid":"PBO:0050013"}


id: PR:Q09901
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gto2 gene.","definition_xrefs":["UniProtKB:Q09901","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized family 31 glucosidase C30D11.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.01c","synonyms":[{"name":"Spom972h-gto2","type":"exact"}],"termid":"PR:Q09901"}


id: MONDO:0010880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary hemorrhagic telangiectasia in which the cause of the disease is a mutation in the ACVRL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemorrhagic telangiectasia","termid":"MONDO:0019180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"telangiectasia, hereditary hemorrhagic, type 2","secondary_identifiers":["OMIM:600376","UMLS:C1838163","GARD:9901","MEDGEN:324960"],"synonyms":[{"name":"ACVRL1 hereditary hemorrhagic telangiectasia","type":"exact"},{"name":"HHT2","type":"related"},{"name":"ORW2","type":"related"},{"name":"Osler Weber Rendu syndrome type 2","type":"related"},{"name":"hereditary hemorrhagic telangiectasia caused by mutation in ACVRL1","type":"exact"},{"name":"hereditary hemorrhagic telangiectasia type 2","type":"related"},{"name":"pulmonary arterial hypertension, hereditary hemorrhagic telangiectasia-related","type":"related"},{"name":"telangiectasia hereditary hemorrhagic type 2","type":"related"},{"name":"telangiectasia, hereditary hemorrhagic, type 2","type":"exact"}],"termid":"MONDO:0010880","xrefs":{"Monarch":{"xref_id":"0010880"}}}


id: FYPO:0002183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and cells with normal morphology (i.e. size, shape, and structure). The cells with normal morphology arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and cells with normal morphology (obsolete FYPO:0002183)","termid":"FYPO:0002183"}


id: PBO:0067222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 291, pseudogene","termid":"PBO:0067222"}


id: MOD:00136
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to pyruvic acid.","definition_xrefs":["PubMed:8464063","PubMed:10085076","RESID:AA0127#CYS","Unimod:382","PubMed:3042771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"pyruvic acid","termid":"MOD:01154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"pyruvic acid (Cys)","synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Cys)","type":"exact"},{"name":"Pyruv(Cys)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:00136"}


id: PBO:0053645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 693","termid":"PBO:0053645"}


id: GO:0032705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-21 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-21 production","termid":"GO:0032665"},{"relation_name":"negatively_regulates","term_name":"interleukin-21 production","termid":"GO:0032625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-21 production","secondary_identifiers":["GO:0045391"],"synonyms":[{"name":"down regulation of interleukin-21 production","type":"exact"},{"name":"down-regulation of interleukin-21 production","type":"exact"},{"name":"downregulation of interleukin-21 production","type":"exact"},{"name":"negative regulation of interleukin-21 biosynthetic process","type":"narrow"}],"termid":"GO:0032705"}


id: GO:0051120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 12S-5Z,8Z,10E,14Z-12-hydro(pero)xy-eicosa-5,8,10,14-tetraenoic acid = (5Z,9E,14Z)-(8,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate. 12S-5Z,8Z,10E,14Z-12-hydro(pero)xy-eicosa-5,8,10,14-tetraenoic acid is also known as 12S-HpETE, and (5Z,9E,14Z)-(8,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate as hepoxilin A3.","definition_xrefs":["PMID:15123652"],"gene_count":0,"genotype_count":0,"name":"obsolete hepoxilin A3 synthase activity (obsolete GO:0051120)","secondary_identifiers":["Reactome:R-HSA-2161794","Reactome:R-HSA-8942208"],"termid":"GO:0051120"}


id: PBO:0088576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc82","termid":"PBO:0088576"}


id: PBO:0081085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 15","termid":"PBO:0081085"}


id: FYPO:0005084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at ribosomal RNA (rRNA) genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:21151114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at ncRNA gene","termid":"FYPO:0005083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to chromatin at rRNA gene","synonyms":[{"name":"normal protein localisation to chromatin at rRNA gene","type":"exact"},{"name":"normal protein localization to chromatin at rDNA","type":"exact"},{"name":"normal protein localization to chromatin at rRNA gene during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at rRNA gene during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at ribosomal DNA","type":"exact"}],"termid":"FYPO:0005084"}


id: GO:1904645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a amyloid-beta stimulus.","definition_xrefs":["PMID:23555824","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amyloid-beta","synonyms":[{"name":"response to beta-amyloid","type":"exact"},{"name":"response to beta-amyloids","type":"related"}],"termid":"GO:1904645"}


id: PBO:0113092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic copper-zinc superoxide dismutase; also sulfide oxidase; detoxifies superoxide and hydrogen sulfide; stabilizes Yck1p and Yck2p kinases in glucose to repress respiration; phosphorylated by Dun1p, enters nucleus under oxidative stress to promote transcription of stress response genes; abundance increases under DNA replication stress; localization to mitochondrial intermembrane space is modulated by MICOS complex; human ortholog SOD1 implicated in ALS complements a null allele","termid":"PBO:0113092"}


id: MONDO:0022380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characterized by acute lymphoblastic leukemia with the presence of congenital sporadic aniridia, the absence of an iris, where neither parent has aniridia.","definition_xrefs":["PMID:2735788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute lymphoblastic leukemia congenital sporadic aniridia","termid":"MONDO:0022380","xrefs":{"Monarch":{"xref_id":"0022380"}}}


id: PBO:0050562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRG and FETUB antisense RNA 1","termid":"PBO:0050562"}


id: PBO:0075011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-22","termid":"PBO:0075011"}


id: MONDO:0030507
data:
  {"annotated_genes":["SJAG_03698","SJAG_03418"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86428,86429],"is_not":false,"summary":null,"term":"MONDO:0030507"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03418":null,"SJAG_03698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 61","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5562048","DOID:0112350","OMIM:619672","MEDGEN:1794258"],"synonyms":[{"name":"SPGF61","type":"exact"}],"termid":"MONDO:0030507","terms_by_termid":{"MONDO:0030507":null},"xrefs":{"Monarch":{"xref_id":"0030507"}}}


id: PBO:0071154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 19","termid":"PBO:0071154"}


id: GO:0042299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3-epoxysqualene = lupeol. This reaction is the cyclization of (S)-2,3-epoxysqualene (2,3-oxidosqualene) to lupeol.","definition_xrefs":["MetaCyc:RXN-111","PMID:9883589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"lupeol synthase activity","secondary_identifiers":["EC:5.4.99.41","RHEA:31383"],"synonyms":[{"name":"oxidosqualene:lupeol cyclase activity","type":"exact"}],"termid":"GO:0042299"}


id: MONDO:0003171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A astrocytoma that involves the pineal body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diencephalic astrocytomas","termid":"MONDO:0003169"},{"relation_name":"is_a","term_name":"pineal gland cancer","termid":"MONDO:0003249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal gland astrocytoma","secondary_identifiers":["MEDGEN:83711","NCIT:C8274","DOID:4858","UMLS:C0280795"],"synonyms":[{"name":"astrocytoma (excluding glioblastoma) of pineal body","type":"exact"},{"name":"astrocytoma of pineal gland","type":"exact"},{"name":"astrocytoma of the pineal gland","type":"exact"},{"name":"pineal astrocytic tumor","type":"exact"},{"name":"pineal astrocytic tumour","type":"exact"},{"name":"pineal astrocytoma","type":"exact"},{"name":"pineal body astrocytoma","type":"exact"},{"name":"pineal body astrocytoma (excluding glioblastoma)","type":"exact"}],"termid":"MONDO:0003171","xrefs":{"Monarch":{"xref_id":"0003171"}}}


id: PBO:0026969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actin_cortical_patches_present_in_decreased_numbers","termid":"PBO:0026969"}


id: PBO:0028848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_stability_during_cellular_response_to_UV","termid":"PBO:0028848"}


id: MONDO:0100045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"epidermodysplasia verruciformis, susceptibility to","termid":"MONDO:0100043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermodysplasia verruciformis, susceptibility to, 1","secondary_identifiers":["OMIM:226400","MEDGEN:1648341","UMLS:C4722564"],"synonyms":[{"name":"EV1","type":"exact"},{"name":"epidermodysplasia verruciformis 1","type":"exact"}],"termid":"MONDO:0100045","xrefs":{"Monarch":{"xref_id":"0100045"}}}


id: PBO:0084494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein involved in meiotic recombination; involved in DMC1-dependent meiotic recombination; forms heterodimer with Mei5p; proposed to be an assembly factor for Dmc1p","termid":"PBO:0084494"}


id: PBO:0029652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_histidine","termid":"PBO:0029652"}


id: MOD:01070
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a pentafluorophenyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentafluorophenyl modified residue","synonyms":[{"name":"Pfp","type":"exact"}],"termid":"MOD:01070"}


id: GO:0004601
data:
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id: PBO:0044837
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id: PBO:0009381
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id: GO:0010507
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id: PBO:0048837
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id: PR:Q10408
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id: MONDO:0019714
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id: GO:0086069
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id: PBO:0062594
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id: MONDO:0015567
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id: PBO:0028374
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id: GO:1902531
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