# terms

id: PBO:0044798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 11, pseudogene","termid":"PBO:0044798"}


id: MONDO:0044259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Two types of melanin, the red pheomelanin and the black eumelanin, are present in human skin. {22:Valverde et al. (1995)} noted that eumelanin is photoprotective, whereas pheomelanin may contribute to UV-induced skin damage because of its potential to generate free radicals in response to ultraviolet radiation. Individuals with red hair have a predominance of pheomelanin in hair and skin and/or a reduced ability to produce eumelanin, which may explain why they fail to tan and are at risk from ultraviolet radiation. In mammals, the relative proportions of pheomelanin and eumelanin are regulated by melanocyte-stimulating hormone (see OMIM:176830), which acts via its receptor (MC1R) on melanocytes to increase the synthesis of eumelanin, and also via the product of the agouti locus (AGTI; OMIM:600201), which antagonizes this action.","definition_xrefs":["OMIM:266300"],"gene_count":0,"genotype_count":0,"name":"obsolete skin/hair/eye pigmentation, variation in, 2 (obsolete MONDO:0044259)","synonyms":[{"name":"Blond hair/fair skin","type":"related"},{"name":"Red hair color","type":"related"},{"name":"Rha","type":"related"},{"name":"SHEP2","type":"related"},{"name":"UV-induced skin damage","type":"exact"},{"name":"UV-induced skin damage, susceptibility to","type":"related"},{"name":"hair color 2","type":"related"},{"name":"skin/hair/eye pigmentation 2, blond hair/fair skin","type":"exact"},{"name":"skin/hair/eye pigmentation 2, red hair/fair skin","type":"exact"},{"name":"skin/hair/eye pigmentation, variation IN, 2","type":"related"}],"termid":"MONDO:0044259","xrefs":{"Monarch":{"xref_id":"0044259"}}}


id: MONDO:0001522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by a fascination with fire and recurrent episodes of fire setting during which the individual experiences a rising subjective sense of tension before the fire setting and a sense of gratification or relief when setting the fire. There is no ulterior motive (such as monetary gain or the expression of political ideology) to the fire setting.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impulse control disorder","termid":"MONDO:0001162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyromania","secondary_identifiers":["UMLS:C0016142","SCTID:600009","ICD9:312.33","MEDGEN:42028","NCIT:C94334","ICD10CM:F63.1","DOID:12402","icd11.foundation:1532500290","MESH:D005391"],"synonyms":[{"name":"firesetting behavior","type":"exact"},{"name":"firesetting behaviour","type":"exact"},{"name":"pathological firesetting","type":"exact"}],"termid":"MONDO:0001522","xrefs":{"Monarch":{"xref_id":"0001522"}}}


id: GO:2000757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein acetylation","termid":"GO:1901984"},{"relation_name":"is_a","term_name":"regulation of peptidyl-lysine acetylation","termid":"GO:2000756"},{"relation_name":"negatively_regulates","term_name":"peptidyl-lysine acetylation","termid":"GO:0018394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-lysine acetylation","termid":"GO:2000757"}


id: PBO:0087094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L9A; homologous to mammalian ribosomal protein L9 and bacterial L6; RPL9A has a paralog, RPL9B, that arose from a single-locus duplication","termid":"PBO:0087094"}


id: PBO:0028317
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_LTR-derived_RNA_level","termid":"PBO:0028317"}


id: GO:0001938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of endothelial cell proliferation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell proliferation","termid":"GO:0001936"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"positively_regulates","term_name":"endothelial cell proliferation","termid":"GO:0001935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell proliferation","synonyms":[{"name":"activation of endothelial cell proliferation","type":"narrow"},{"name":"stimulation of endothelial cell proliferation","type":"narrow"},{"name":"up regulation of endothelial cell proliferation","type":"exact"},{"name":"up-regulation of endothelial cell proliferation","type":"exact"},{"name":"upregulation of endothelial cell proliferation","type":"exact"}],"termid":"GO:0001938"}


id: MONDO:0100143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A COVID-19 infection that involves respiratory failure, septic shock, and/or multiple organ dysfunction.","gene_count":0,"genotype_count":0,"name":"obsolete critical COVID-19 infection (obsolete MONDO:0100143)","secondary_identifiers":["DOID:0081012"],"termid":"MONDO:0100143","xrefs":{"Monarch":{"xref_id":"0100143"}}}


id: GO:0016703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and one oxygen atom is incorporated into a donor.","definition_xrefs":["EC:1.13.12.-","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","termid":"GO:0016701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}


id: PBO:0073952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 1","termid":"PBO:0073952"}


id: PBO:0034634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_segregation_during_meiosis_I_with_split_kinetochore_and_normal_chromosome_separation","termid":"PBO:0034634"}


id: FYPO:0001524
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of L-thialysine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to L-thialysine","synonyms":[{"name":"resistance to L-thialysine during mitotic cell cycle","type":"related"},{"name":"resistance to L-thialysine during vegetative growth","type":"exact"},{"name":"resistance to thialysine","type":"broad"},{"name":"resistant to L-thialysine","type":"exact"}],"termid":"FYPO:0001524"}


id: PBO:0041451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 53","termid":"PBO:0041451"}


id: GO:1905243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',5-triiodo-L-thyronine stimulus.","definition_xrefs":["PMID:21382270","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to 3,3',5-triiodo-L-thyronine","termid":"GO:1905242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 3,3',5-triiodo-L-thyronine","synonyms":[{"name":"cellular response to Liothyronin","type":"exact"},{"name":"cellular response to Liothyronine","type":"exact"},{"name":"cellular response to Liothyroninum","type":"exact"}],"termid":"GO:1905243"}


id: PBO:0027830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ascospore_release_from_ascus","termid":"PBO:0027830"}


id: MONDO:1012354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy, non-human animal","termid":"MONDO:1011872"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy, dog","secondary_identifiers":["OMIA:001292-9615"],"termid":"MONDO:1012354","xrefs":{"Monarch":{"xref_id":"1012354"}}}


id: PBO:0048848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonadotropin releasing hormone 1","termid":"PBO:0048848"}


id: PBO:0066133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASSF10 divergent transcript","termid":"PBO:0066133"}


id: MONDO:0003517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma which may be cystic; it is composed entirely of well differentiated, adult-type tissues, without evidence of fetal-type tissues.","definition_xrefs":["NCIT:C9015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma","termid":"MONDO:0002601"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature teratoma","secondary_identifiers":["SCTID:254875009","DOID:5566","ICDO:9080/0","UMLS:C1368910","MEDGEN:277967","NANDO:2200105","ONCOTREE:VMT"],"synonyms":[{"name":"mature teratoma","type":"exact"}],"termid":"MONDO:0003517","xrefs":{"Monarch":{"xref_id":"0003517"}}}


id: MONDO:0036045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperthyroxinemia","termid":"MONDO:0005333"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"euthyroid dysprealbuminemic hyperthyroxinemia","secondary_identifiers":["Orphanet:597939","UMLS:C5680265","GARD:22401","MEDGEN:1842463"],"synonyms":[{"name":"Euthyroid dystransthyretinemic hyperthyroxinemia","type":"exact"}],"termid":"MONDO:0036045","xrefs":{"Monarch":{"xref_id":"0036045"}}}


id: MONDO:0002926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant neoplasm with melanocytic differentiation characterized by the presence of polygonal or spindle shaped clear cells. This sarcoma usually affects the tendons and aponeuroses and is associated with a poor prognosis due to recurrences and metastases.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"clear cell sarcoma","secondary_identifiers":["EFO:0008498","UMLS:C0206651","MESH:D018227","ICD9:171.9","SCTID:402561003","DOID:4233","NANDO:2200062","ONCOTREE:CCS","ICDO:9044/3","MEDGEN:104909","NCIT:C3745"],"synonyms":[{"name":"adult soft part clear cell sarcoma","type":"exact"},{"name":"chordoid sarcoma","type":"exact"},{"name":"clear cell sarcoma (morphologic abnormality)","type":"exact"},{"name":"clear cell sarcoma - not kidney","type":"exact"},{"name":"clear cell sarcoma of soft parts","type":"exact"},{"name":"clear cell sarcoma of soft tissue","type":"exact"},{"name":"clear cell sarcoma/malignant melanoma of soft parts (excluding clear cell sarcoma of the kidney)","type":"exact"},{"name":"malignant melanoma of soft parts","type":"related"},{"name":"malignant melanoma of soft tissues","type":"exact"},{"name":"malignant melanoma of the soft parts","type":"exact"},{"name":"melanoma, malignant, of soft parts","type":"exact"}],"termid":"MONDO:0002926","xrefs":{"Monarch":{"xref_id":"0002926"}}}


id: MONDO:0008364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An episodic vasoconstriction resulting in discoloration of the skin and pain in the affected areas, often involving fingers or toes. Classically associated with triphasic color changes (white, blue, red) but may be biphasic. Often occurs in response to cold temperatures or emotional stress. May be primary or secondary to an underlying autoimmune disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"peripheral vascular disease","termid":"MONDO:0005294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Raynaud disease","secondary_identifiers":["OMIM:179600","MESH:D011928","SCTID:195295006","UMLS:C0034734","EFO:1001145","ICD9:443.0","DOID:10300","ICD10CM:I73.0","MEDGEN:20473","NCIT:C116359"],"synonyms":[{"name":"Raynaud disease","type":"exact"},{"name":"Raynaud syndrome","type":"exact"},{"name":"Raynaud's disease","type":"exact"},{"name":"Raynaud's syndrome","type":"exact"},{"name":"Raynaud's syndrome (disorder) [ambiguous]","type":"exact"},{"name":"cold fingers, hereditary","type":"related"},{"name":"secondary Raynaud disease","type":"exact"},{"name":"secondary Raynaud phenomenon","type":"exact"},{"name":"secondary Raynaud's disease","type":"exact"},{"name":"secondary Raynaud's phenomenon","type":"exact"}],"termid":"MONDO:0008364","xrefs":{"Monarch":{"xref_id":"0008364"}}}


id: FYPO:0002624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the nucleus, visible as foci or dots by microscopy, is abnormally localized such that fewer dots are observed than in normal (wild type) cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased punctate nuclear protein localization","synonyms":[{"name":"decreased punctate nuclear protein localisation","type":"exact"},{"name":"decreased punctate nuclear protein localization during mitotic cell cycle","type":"related"},{"name":"decreased punctate nuclear protein localization during vegetative growth","type":"exact"},{"name":"reduced punctate nuclear protein localization","type":"exact"}],"termid":"FYPO:0002624"}


id: GO:0006527
data:
  {"annotated_genes":["SJAG_03398","SJAG_00495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[70838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[113511,78648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine metabolic process","termid":"GO:0006525"},{"relation_name":"is_a","term_name":"glutamine family amino acid catabolic process","termid":"GO:0009065"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_03398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"arginine catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"arginine breakdown","type":"exact"},{"name":"arginine catabolism","type":"exact"},{"name":"arginine degradation","type":"exact"}],"termid":"GO:0006527","terms_by_termid":{"GO:0010121":null,"GO:0019544":null,"GO:0019547":null}}


id: PBO:0087705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; component of the Middle domain of mediator; required for regulation of RNA polymerase II activity; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087705"}


id: PATO:0001409
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's resembling a long tapered rod.","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle-shaped","termid":"PATO:0001409"}


id: GO:0032822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell proliferation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of natural killer cell proliferation","termid":"GO:0032819"},{"relation_name":"is_a","term_name":"regulation of natural killer cell proliferation involved in immune response","termid":"GO:0032820"},{"relation_name":"positively_regulates","term_name":"natural killer cell proliferation involved in immune response","termid":"GO:0002324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell proliferation involved in immune response","synonyms":[{"name":"activation of natural killer cell proliferation during immune response","type":"narrow"},{"name":"positive regulation of NK cell proliferation during immune response","type":"related"},{"name":"positive regulation of natural killer cell proliferation during immune response","type":"related"},{"name":"stimulation of natural killer cell proliferation during immune response","type":"narrow"},{"name":"up regulation of natural killer cell proliferation during immune response","type":"related"},{"name":"up-regulation of natural killer cell proliferation during immune response","type":"related"},{"name":"upregulation of natural killer cell proliferation during immune response","type":"related"}],"termid":"GO:0032822"}


id: GO:1901594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a capsazepine stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to capsazepine","termid":"GO:1901594"}


id: PBO:0080197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 5","termid":"PBO:0080197"}


id: MONDO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete variable age at onset electroclinical syndrome (obsolete MONDO:0000416)","termid":"MONDO:0000416","xrefs":{"Monarch":{"xref_id":"0000416"}}}


id: PBO:0060394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 2B","termid":"PBO:0060394"}


id: PBO:0071882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 20","termid":"PBO:0071882"}


id: PBO:0048944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi SNAP receptor complex member 2","termid":"PBO:0048944"}


id: PR:P26659
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TFIIH basal transcription factor complex helicase XPD subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11472:SF1","OMA:SCHPO00261","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair helicase rad15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.12","secondary_identifiers":["UniProtKB:P26659"],"synonyms":[{"name":"DNA repair helicase RAD3 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ERCC2","type":"exact"},{"name":"protein rhp3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P26659"}


id: FYPO:0007452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plus ends end of microtubules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:15809031","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to microtubule end during mitotic interphase","termid":"FYPO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to microtubule plus-end","synonyms":[{"name":"normal protein localisation to microtubule plus-end","type":"exact"},{"name":"normal protein localization to microtubule plus-end during mitotic cell cycle","type":"related"},{"name":"normal protein localization to microtubule plus-end during vegetative growth","type":"exact"}],"termid":"FYPO:0007452"}


id: PBO:0030698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_catalase_activity","termid":"PBO:0030698"}


id: GO:0052241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a specific chemical on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052241)","synonyms":[{"name":"positive chemotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052241"}


id: FYPO:0000775
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[119608,119604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[119598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_04551":null},"genotype_count":4,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610","SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck2delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal protein phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000775","terms_by_termid":{"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null}}


id: PBO:0071151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 16","termid":"PBO:0071151"}


id: GO:0055020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle fiber development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle fiber development","termid":"GO:0055018"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle cell differentiation","termid":"GO:2000727"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell development","termid":"GO:0055013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle fiber development","synonyms":[{"name":"activation of cardiac muscle fiber development","type":"narrow"},{"name":"positive regulation of cardiac muscle fibre development","type":"exact"},{"name":"positive regulation of heart muscle fiber development","type":"exact"},{"name":"stimulation of cardiac muscle fiber development","type":"narrow"},{"name":"up regulation of cardiac muscle fiber development","type":"exact"},{"name":"up-regulation of cardiac muscle fiber development","type":"exact"},{"name":"upregulation of cardiac muscle fiber development","type":"exact"}],"termid":"GO:0055020"}


id: PBO:0043285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member M","termid":"PBO:0043285"}


id: GO:0047431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxy-6-methylpyridine-3,4-dicarboxylate + H+ = 5-hydroxy-6-methylpyridine-3-carboxylate + CO2.","definition_xrefs":["RHEA:13669","EC:4.1.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-decarboxylase activity","secondary_identifiers":["MetaCyc:4.1.1.51-RXN","KEGG_REACTION:R03461"],"synonyms":[{"name":"3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-carboxy-lyase (3-hydroxy-2-methylpyridine-5-carboxylate-forming)","type":"related"},{"name":"3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-carboxy-lyase activity","type":"related"}],"termid":"GO:0047431"}


id: MONDO:0013232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mseleni joint disease (MJD) is a rare and crippling chondrodysplasia, reported mainly in the Maputaland region in northern Kwazulu Natal, South Africa, characterized by a bilateral and uniform arthropathy of the joints that primarily and most severely affects the hip but that can also affect many other joints (i.e. knees, ankles, wrists, shoulders, elbows), and that manifests with pain and stiffness that progressively limits joint movement, eventually compromising a patient's ability to walk. Severe short staure and brachydactyly have been reported in a few patients with MJD.","definition_xrefs":["Orphanet:2619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"brachydactylous dwarfism, Mseleni type","secondary_identifiers":["MEDGEN:419408","SCTID:715470008","UMLS:C2931420","GARD:960","icd11.foundation:419953164","OMIM:613342","MESH:C537086"],"synonyms":[{"name":"Mseleni JOINT disease","type":"related"},{"name":"Mseleni joint disease","type":"exact"},{"name":"brachydactylous dwarfism Mseleni type","type":"related"},{"name":"brachydactylous dwarfs of Mseleni","type":"related"}],"termid":"MONDO:0013232","xrefs":{"Monarch":{"xref_id":"0013232"}}}


id: PBO:0108511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 and Rpd3L histone deacetylase complex subunit Sds3","termid":"PBO:0108511"}


id: GO:1902869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amacrine cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:mr","GOC:TermGenie","PMID:16872597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"amacrine cell differentiation","termid":"GO:0035881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amacrine cell differentiation","synonyms":[{"name":"regulation of amacrine neuron differentiation","type":"exact"}],"termid":"GO:1902869"}


id: PBO:0089975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-glucan synthase adaptor protein Smi1","termid":"PBO:0089975"}


id: PR:Q9USK8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ags1 gene.","definition_xrefs":["UniProtKB:Q9USK8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase ags1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.01","synonyms":[{"name":"Spom972h-ags1","type":"exact"},{"name":"cell wall alpha-1,4-glucan synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USK8"}


id: PBO:0081345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 148","termid":"PBO:0081345"}


id: PBO:0061740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 3","termid":"PBO:0061740"}


id: GO:0035560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pheophorbide a + H2O = pyropheophorbide a + methanol + CO2. The reaction occurs in two steps; pheophoridase catalyzes the conversion of pheophorbide a to a precursor of pyropheophorbide a, C-13(2)-carboxylpyropheophorbide a, by demethylation, and then the precursor is decarboxylated non-enzymatically to yield pyropheophorbide a.","definition_xrefs":["RHEA:32483","PMID:16228561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"pheophorbidase activity","secondary_identifiers":["EC:3.1.1.82"],"synonyms":[{"name":"PPD activity","type":"related"},{"name":"phedase activity","type":"related"},{"name":"pheophoridase activity","type":"related"}],"termid":"GO:0035560"}


id: MONDO:0002919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the posterior cranial fossa.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior cranial fossa meningioma","secondary_identifiers":["MEDGEN:290609","UMLS:C1565950","DOID:4211","NCIT:C6775"],"synonyms":[{"name":"meningioma (disease) of posterior cranial fossa","type":"exact"},{"name":"meningioma of posterior cranial fossa","type":"exact"},{"name":"meningioma of the posterior cranial fossa","type":"exact"},{"name":"posterior cranial fossa meningioma (disease)","type":"exact"}],"termid":"MONDO:0002919","xrefs":{"Monarch":{"xref_id":"0002919"}}}


id: PBO:0109651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A antisense RNA 1","termid":"PBO:0109651"}


id: PBO:0109010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 143 Y-linked pseudogene","termid":"PBO:0109010"}


id: PBO:0048895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 16, pseudogene","termid":"PBO:0048895"}


id: GO:0046247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of terpenes, any of a large group of hydrocarbons made up of isoprene units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid catabolic process","termid":"GO:0008300"},{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"terpene catabolic process","synonyms":[{"name":"terpene breakdown","type":"exact"},{"name":"terpene catabolism","type":"exact"},{"name":"terpene degradation","type":"exact"}],"termid":"GO:0046247"}


id: GO:0034606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The response by the male to a hermaphrodite after initial contact following mate finding. The male stops forward locomotion, presses the ventral side of his tail against his partner's body, and begins moving backward along the hermaphrodite. Male response behavior is initiated when sensory neurons located in the rays of his tail contact a potential mate.","definition_xrefs":["WB_REF:WBPaper00002109","PMID:18050467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hermaphrodite contact","termid":"GO:0034606"}


id: PBO:0111352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Utp13","termid":"PBO:0111352"}


id: PBO:0073670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein alpha","termid":"PBO:0073670"}


id: PBO:0089384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone for translation factor EF2, Armadillo-type fold, Hgh1","termid":"PBO:0089384"}


id: PBO:0047634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLT3 interacting zinc finger 1","termid":"PBO:0047634"}


id: PBO:0074488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMYD family member 5","termid":"PBO:0074488"}


id: MOD:01134
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescein labelling of peptide N-terminal using NHS ester","termid":"MOD:01134"}


id: FYPO:0004017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cytochrome-c oxidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"},{"relation_name":"is_a","term_name":"normal transmembrane transporter activity","termid":"FYPO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000002","FYPO:0002114","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal cytochrome-c oxidase activity","termid":"FYPO:0004017"}


id: FYPO:0004715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer, but larger, vacuoles than normal when the cell is subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large vacuoles present in decreased numbers during vegetative growth","termid":"FYPO:0002795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"large vacuoles present in decreased numbers during salt stress","synonyms":[{"name":"enlarged vacuoles present in decreased numbers during salt stress","type":"exact"},{"name":"large vacuoles present in decreased numbers during salt stress during mitotic cell cycle","type":"related"},{"name":"large vacuoles present in decreased numbers during salt stress during vegetative growth","type":"exact"},{"name":"large vacuoles present in reduced numbers during salt stress","type":"exact"}],"termid":"FYPO:0004715"}


id: GO:0090255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to imaginal disc-derived wing morphogenesis.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090255"}


id: GO:1905689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of diacylglycerol kinase activity.","definition_xrefs":["GOC:PARL","GOC:bc","GOC:TermGenie","PMID:23091060","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of diacylglycerol kinase activity (obsolete GO:1905689)","synonyms":[{"name":"activation of 1,2-diacylglycerol kinase (phosphorylating)","type":"narrow"},{"name":"activation of 1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"activation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"activation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"activation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"activation of DG kinase activity","type":"narrow"},{"name":"activation of DGK activity","type":"narrow"},{"name":"activation of arachidonoyl-specific diacylglycerol kinase activity","type":"narrow"},{"name":"activation of diacylglycerol kinase activity","type":"narrow"},{"name":"activation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"activation of diglyceride kinase activity","type":"narrow"},{"name":"activation of sn-1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"positive regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"positive regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"positive regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"positive regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"positive regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"positive regulation of DG kinase activity","type":"exact"},{"name":"positive regulation of DGK activity","type":"exact"},{"name":"positive regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"positive regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"positive regulation of diglyceride kinase activity","type":"exact"},{"name":"positive regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"up regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"up regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"up regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"up regulation of DG kinase activity","type":"exact"},{"name":"up regulation of DGK activity","type":"exact"},{"name":"up regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"up regulation of diglyceride kinase activity","type":"exact"},{"name":"up regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"up-regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"up-regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"up-regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"up-regulation of DG kinase activity","type":"exact"},{"name":"up-regulation of DGK activity","type":"exact"},{"name":"up-regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"up-regulation of diglyceride kinase activity","type":"exact"},{"name":"up-regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"upregulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"upregulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"upregulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"upregulation of DG kinase activity","type":"exact"},{"name":"upregulation of DGK activity","type":"exact"},{"name":"upregulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"upregulation of diglyceride kinase activity","type":"exact"},{"name":"upregulation of sn-1,2-diacylglycerol kinase activity","type":"exact"}],"termid":"GO:1905689"}


id: PBO:0083824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); cooperates with Duo1p and Pse1p to connect the DASH complex with the microtubules (MT); couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; Ipl1p target for regulating kinetochore-MT attachments","termid":"PBO:0083824"}


id: GO:0033276
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that does not contain either a TATA-binding protein (TBP) or a TBP-like factor, but is composed of several TAFIIs and other proteins, including a histone acetyltransferase. This complex is able to nucleate transcription initiation by RNA polymerase II, can mediate transcriptional activation, and has histone acetyltransferase activity.","definition_xrefs":["PMID:10373431","PMID:9603525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"},{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005654","GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFTC complex","termid":"GO:0033276"}


id: PBO:0077456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 6","termid":"PBO:0077456"}


id: MONDO:0000654
data:
  {"annotated_genes":["SJAG_02855","SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the connective and soft tissue. Representative examples include lipoma, leiomyoma, fibroma, and osteoma.","definition_xrefs":["NCIT:C53684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system benign neoplasm","termid":"MONDO:0000636"},{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"connective and soft tissue neoplasm","termid":"MONDO:0044334"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_02855":null},"genotype_count":0,"is_obsolete":false,"name":"benign connective and soft tissue neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060123","MEDGEN:83866","NCIT:C3377","SCTID:387837005","UMLS:C0347481"],"synonyms":[{"name":"benign connective and soft tissue neoplasm","type":"exact"},{"name":"benign connective and soft tissue tumor","type":"exact"},{"name":"benign connective and soft tissue tumour","type":"exact"},{"name":"benign mesenchymal cell neoplasm","type":"exact"},{"name":"benign neoplasm of the soft tissue and bone","type":"exact"},{"name":"benign tumor of the soft tissue and bone","type":"exact"},{"name":"benign tumour of the soft tissue and bone","type":"exact"},{"name":"connective and soft tissue neoplasm, benign","type":"exact"},{"name":"connective tissue benign neoplasm","type":"exact"},{"name":"neoplasm of soft tissue","type":"related"},{"name":"neoplasm of soft tissues","type":"related"},{"name":"soft tissue benign neoplasm","type":"related"},{"name":"tumor of the soft tissue","type":"related"},{"name":"tumour of the soft tissue","type":"related"}],"termid":"MONDO:0000654","terms_by_termid":{"MONDO:0007908":null,"MONDO:0010621":null},"xrefs":{"Monarch":{"xref_id":"0000654"}}}


id: MONDO:0014389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, glycogen storage disorder characterized by polyglucosan accumulation in various tissues, manifesting with progressive proximal muscle weakness in the lower limbs and rapidly progressive, usually dilated, cardiomyopathy. Hepatic involvement and growth retardation may be associated. Early-onset immunodeficiency and autoinflammation, presenting with recurrent bacterial infections, have also been reported.","definition_xrefs":["Orphanet:397937"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuromuscular disease with dilated cardiomyopathy (obsolete MONDO:0016334)","termid":"MONDO:0016334"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neurometabolic disease (obsolete MONDO:0019058)","termid":"MONDO:0019058"},{"relation_name":"is_a","term_name":"polyglucosan body myopathy","termid":"MONDO:0000192"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"polyglucosan body myopathy 1 with or without immunodeficiency","secondary_identifiers":["NANDO:2200766","UMLS:C4014605","OMIM:615895","MEDGEN:863042","GARD:17643"],"synonyms":[{"name":"PGBM1","type":"exact"},{"name":"polyglucosan body myopathy 1 with or without immunodeficiency","type":"exact"},{"name":"polyglucosan body myopathy type 1","type":"exact"},{"name":"polyglucosan body myopathy, early-onset, with or without immunodeficiency","type":"exact"}],"termid":"MONDO:0014389","xrefs":{"Monarch":{"xref_id":"0014389"}}}


id: GO:0071938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement any form of vitamin A into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Vitamin A is any of several retinoid derivatives of beta-carotene, primarily retinol, retinal, or retinoic acid.","definition_xrefs":["GOC:mah","PMID:16011460","PMID:1924551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"vitamin A transport","synonyms":[{"name":"vitamin A uptake and transport","type":"related"}],"termid":"GO:0071938"}


id: GO:0099108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Activation potassium ion channel activity via direct interaction with a potassium ion channel during G protein-coupled receptor signaling.","definition_xrefs":["PMID:9429760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activator activity","termid":"GO:0099104"},{"relation_name":"is_a","term_name":"ion channel regulator activity involved in G protein-coupled receptor signaling pathway","termid":"GO:0099107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005215"},{"rel_name":"regulates","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"regulates","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"positively_regulates","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0022857","GO:0098772","GO:0005215"],"is_obsolete":false,"name":"potassium channel activator activity involved in G protein-coupled receptor signaling pathway","synonyms":[{"name":"potassium channel activator activity involved in G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0099108"}


id: GO:1990938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of one or more of its own aspartate amino acid residues, or an aspartate residue on an identical protein.","definition_xrefs":["PMID:26134396","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-aspartic acid phosphorylation","termid":"GO:0018217"},{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-aspartic acid autophosphorylation","synonyms":[{"name":"aspartyl autophosphorylation","type":"exact"},{"name":"peptidyl-aspartate autophosphorylation","type":"exact"}],"termid":"GO:1990938"}


id: PBO:0002717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein kinase regulatory subunit Atg13","termid":"PBO:0002717"}


id: FYPO:0006810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which large chromosomal rearrangements occur less frequently than in wild type cells. Chromosomal rearrangements may include deletions, duplications, inversions, and translocations.","definition_xrefs":["PMID:30652128","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased gross chromosomal rearrangement","synonyms":[{"name":"decreased occurrence of gross chromosomal rearrangement","type":"exact"}],"termid":"FYPO:0006810"}


id: GO:1905020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of methionine-tRNA ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:1665486"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of methionine-tRNA ligase activity (obsolete GO:1905020)","synonyms":[{"name":"activation of L-methionine:tRNAMet ligase (AMP-forming)","type":"narrow"},{"name":"activation of MetRS activity","type":"narrow"},{"name":"activation of methionine translase activity","type":"narrow"},{"name":"activation of methionine-tRNA ligase activity","type":"narrow"},{"name":"activation of methionyl-tRNA synthetase activity","type":"narrow"},{"name":"activation of methionyl-transfer RNA synthetase activity","type":"narrow"},{"name":"activation of methionyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"activation of methionyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"positive regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"positive regulation of MetRS activity","type":"exact"},{"name":"positive regulation of methionine translase activity","type":"exact"},{"name":"positive regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"positive regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"positive regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"up regulation of MetRS activity","type":"exact"},{"name":"up regulation of methionine translase activity","type":"exact"},{"name":"up regulation of methionine-tRNA ligase activity","type":"exact"},{"name":"up regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"up regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"up regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up-regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"up-regulation of MetRS activity","type":"exact"},{"name":"up-regulation of methionine translase activity","type":"exact"},{"name":"up-regulation of methionine-tRNA ligase activity","type":"exact"},{"name":"up-regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"up-regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up-regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"upregulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"upregulation of MetRS activity","type":"exact"},{"name":"upregulation of methionine translase activity","type":"exact"},{"name":"upregulation of methionine-tRNA ligase activity","type":"exact"},{"name":"upregulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"upregulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"upregulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"upregulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905020"}


id: PBO:0047883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(q15)","termid":"PBO:0047883"}


id: MONDO:0043349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A reactive, well-circumscribed vascular lesion. It is characterized by the formation of thin papillae projecting within the lumen of blood vessels. The papillae are lined by plump endothelial cells. Blood clots are also present.","definition_xrefs":["NCIT:C4391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiomatosis","termid":"MONDO:0024461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intravascular papillary endothelial hyperplasia","secondary_identifiers":["SCTID:238770007","icd11.foundation:1397961760","UMLS:C0343083","Orphanet:673525","MEDGEN:91005"],"synonyms":[{"name":"Masson lesion","type":"exact"},{"name":"Masson pseudotumor","type":"exact"},{"name":"Masson's pseudoangiosarcoma","type":"related"},{"name":"Masson's pseudosarcoma","type":"exact"},{"name":"Masson's pseudotumor","type":"exact"},{"name":"Masson's tumor","type":"related"},{"name":"Masson's tumour","type":"related"},{"name":"Masson's vegetant hemangioma","type":"exact"},{"name":"Masson's vegetant intravascular hemangio-endothelioma","type":"related"},{"name":"intravascular papillary endothelial hyperplasia","type":"exact"},{"name":"masson's pseudosarcoma","type":"related"},{"name":"papillary endothelial hyperplasia","type":"exact"}],"termid":"MONDO:0043349","xrefs":{"Monarch":{"xref_id":"0043349"}}}


id: PBO:0027111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_cell_wall_disassembly_at_cell_fusion_site","termid":"PBO:0027111"}


id: PBO:0082585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin-binding ATPase that regulates histone gene expression; only bromodomain-containing AAA-ATPase in yeast; bromodomain interacts with N-terminal tail of histone H3; relocalizes to cytosol in response to hypoxia; human ortholog ANCCA is coactivator of both estrogen and androgen receptors, and increased expression of ANCCA is associated with breast and prostate cancers with poor prognoses","termid":"PBO:0082585"}


id: PBO:0109812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protoporphyrinogen IX import factor, TMEM14 family","termid":"PBO:0109812"}


id: FYPO:0002060
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119681,119683,119685,119682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000674"}],"single_locus_phenotype":[{"annotations":[119400,119412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004481"},{"annotations":[119577,119718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000082"},{"annotations":[119668,119670,119684,119629,119669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000080"},{"annotations":[119501,119542,119808,119804,119812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001355"},{"annotations":[119461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001690"},{"annotations":[119531,119484,119532,119533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001357"},{"annotations":[119567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001408"},{"annotations":[119694,119779,119767,119513,119628,119458,119530,119459,119768,119627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001234"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in the population are viable in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell population","termid":"FYPO:0002058"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_00409":null,"SJAG_00426":null,"SJAG_00429":null,"SJAG_00514":null,"SJAG_00601":null,"SJAG_01242":null,"SJAG_01355":null,"SJAG_01794":null,"SJAG_01946":null,"SJAG_02527":null,"SJAG_02592":null,"SJAG_02763":null,"SJAG_03198":null,"SJAG_03449":null,"SJAG_03453":null,"SJAG_03575":null,"SJAG_03720":null,"SJAG_03892":null,"SJAG_04464":null,"SJAG_04697":null,"SJAG_04703":null,"SJAG_05207":null},"genotype_count":29,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta":{"display_name":"apc2-361(E548K ts) 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id: MONDO:0007995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated microphthalmia","termid":"MONDO:0000062"},{"relation_name":"is_a","term_name":"isolated anophthalmia-microphthalmia syndrome","termid":"MONDO:0016764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with cataract 1","secondary_identifiers":["MEDGEN:320475","OMIM:156850","UMLS:C1834919","MESH:C563582"],"synonyms":[{"name":"MCOPCT1","type":"exact"},{"name":"cataract, congenital, with microphthalmia","type":"related"},{"name":"congenital cataract with microphthalmia","type":"related"},{"name":"microphthalmia with cataract 1","type":"related"},{"name":"microphthalmia, isolated, with cataract 1","type":"exact"}],"termid":"MONDO:0007995","xrefs":{"Monarch":{"xref_id":"0007995"}}}


id: MONDO:0000235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Rocky mountain spotted fever (obsolete MONDO:0000235)","termid":"MONDO:0000235","xrefs":{"Monarch":{"xref_id":"0000235"}}}


id: PBO:0069128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 378, pseudogene","termid":"PBO:0069128"}


id: MOD:01997
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino or imino hydrogen with a butanoyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butanoylated residue","termid":"MOD:01996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-butanoylated residue","synonyms":[{"name":"N-butanoyl","type":"exact"},{"name":"N-butanoylation","type":"exact"},{"name":"N-butyryl","type":"exact"},{"name":"N-butyrylation","type":"exact"},{"name":"NButRes","type":"exact"}],"termid":"MOD:01997"}


id: MONDO:0007869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kyrle disease is rare condition that affects the skin. People with this condition generally develop large papules with central keratin (a protein found in the skin, hair and nails) plugs throughout their body. These lesions are typically not painful but may cause severe itching. Although it can affect both men and women throughout life, the average age of onset is 30 years. The cause of the disease is currently unknown; however, it is often associated with certain conditions such as diabetes mellitus, kidney disease, liver abnormalities, and congestive heart failure. In some families, the condition appears to be inherited but an underlying genetic cause has not been identified. Treatment aims to address the associated signs and symptoms and any additional disease that may be present. Lesions often heal spontaneously but new ones continue to develop.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kyrle disease","secondary_identifiers":["MESH:C538130","OMIM:149500","MEDGEN:75516","SCTID:34042008","UMLS:C0263382"],"synonyms":[{"name":"Kyrle disease","type":"exact"},{"name":"Kyrle's disease","type":"related"},{"name":"hyperkeratosis follicularis et parafollicularis in cutem penetrans","type":"related"}],"termid":"MONDO:0007869","xrefs":{"Monarch":{"xref_id":"0007869"}}}


id: PBO:0003886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S9 (predicted)","termid":"PBO:0003886"}


id: PBO:0004598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MYND type","termid":"PBO:0004598"}


id: MONDO:0022321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"2-methylacetoacetyl CoA thiolase deficiency","secondary_identifiers":["GARD:8382","UMLS:C2930874","MESH:C535307","MEDGEN:419652"],"termid":"MONDO:0022321","xrefs":{"Monarch":{"xref_id":"0022321"}}}


id: PBO:0078038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 28","termid":"PBO:0078038"}


id: SO:0000598
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000598 edited_by_C_insertion_and_dinucleotide_insertion (obsolete SO:0000598)","synonyms":[{"name":"transcript_edited_by_C-insertion_and_dinucleotide_insertion","type":"related"}],"termid":"SO:0000598"}


id: PBO:0039483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A6, pseudogene","termid":"PBO:0039483"}


id: PBO:0003986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATPase, Arb family ABCF2-like (predicted)","termid":"PBO:0003986"}


id: GO:0061677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-gluconate = pyruvate + D-glyceraldehyde.","definition_xrefs":["RHEA:35583","GOC:dph","PMID:12824170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-D-gluconate aldolase activity","secondary_identifiers":["EC:4.1.2.51","MetaCyc:DHDOGALDOL-RXN","GO:0043725"],"synonyms":[{"name":"2-keto-3-deoxygluconate aldolase activity","type":"exact"},{"name":"KDG aldolase activity","type":"exact"}],"termid":"GO:0061677"}


id: GO:0070999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of gravity in which a sensory mechanical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of gravity","termid":"GO:0009590"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"sensory perception of gravity","termid":"GO:0070998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception of gravity","termid":"GO:0070999"}


id: MONDO:0013146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Brugada syndrome in which the cause of the disease is a mutation in the SCN3B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Brugada syndrome","termid":"MONDO:0015263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Brugada syndrome 7","secondary_identifiers":["MEDGEN:413472","DOID:0110224","OMIM:613120","MESH:C567734","GARD:15620","UMLS:C2751088"],"synonyms":[{"name":"BRGDA7","type":"exact"},{"name":"Brugada syndrome 7","type":"exact"},{"name":"Brugada syndrome caused by mutation in SCN3B","type":"exact"},{"name":"Brugada syndrome type 7","type":"exact"},{"name":"SCN3B Brugada syndrome","type":"exact"},{"name":"atrial fibrillation, familial, 16","type":"related"}],"termid":"MONDO:0013146","xrefs":{"Monarch":{"xref_id":"0013146"}}}


id: PBO:0069884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1172, pseudogene","termid":"PBO:0069884"}


id: MONDO:0033485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 19 with or without polydactyly","secondary_identifiers":["OMIM:617895","MEDGEN:1635837","UMLS:C4693524","DOID:0080295"],"synonyms":[{"name":"SRTD19","type":"related"},{"name":"short-rib thoracic dysplasia 19 with or without polydactyly","type":"exact"}],"termid":"MONDO:0033485","xrefs":{"Monarch":{"xref_id":"0033485"}}}


id: GO:0042004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Promotion of female sex and sexual phenotypes in the hermaphroditic soma. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hermaphrodite somatic sex determination","termid":"GO:0042001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"feminization of hermaphrodite soma","termid":"GO:0042004"}


id: MONDO:0009878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined pituitary hormone deficiencies, genetic form in which the cause of the disease is a mutation in the PROP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"panhypopituitarism","termid":"MONDO:0019591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"pituitary hormone deficiency, combined, 2","secondary_identifiers":["MEDGEN:209236","GARD:15222","OMIM:262600","UMLS:C0878683","MESH:C563172"],"synonyms":[{"name":"CPHD2","type":"related"},{"name":"Hanhart dwarfism","type":"related"},{"name":"PROP1 combined pituitary hormone deficiencies, genetic form","type":"exact"},{"name":"ateliotic dwarfism with hypogonadism","type":"related"},{"name":"combined pituitary hormone deficiencies, genetic form caused by mutation in PROP1","type":"exact"},{"name":"panhypopituitarism","type":"related"},{"name":"pituitary dwarfism 3","type":"related"},{"name":"pituitary hormone deficiency, combined, 2","type":"exact"},{"name":"pituitary hormone deficiency, combined, type 2","type":"exact"}],"termid":"MONDO:0009878","xrefs":{"Monarch":{"xref_id":"0009878"}}}


id: GO:0034107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["PMID:12905029","GOC:add","PMID:14754397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of erythrocyte clearance","termid":"GO:0034106"},{"relation_name":"negatively_regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte clearance","synonyms":[{"name":"negative regulation of RBC clearance","type":"exact"},{"name":"negative regulation of neocytolysis","type":"narrow"},{"name":"negative regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034107"}


id: PBO:0075195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 7","termid":"PBO:0075195"}


id: MONDO:0005459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic disorder caused by protozoa of the Trypanosoma brucei species. It is transmitted by flies and is endemic in various regions of Sub-Saharan Africa. Signs and symptoms include fever, joint pain, headache, and significant swelling of the lymph nodes. If left untreated, the parasitic infection causes anemia, heart, kidney, and endocrine failure, and neurologic damage. Subsequently patients develop confusion, disruption of the sleep cycle, and mental deterioration. The infection may lead to coma and death.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trypanosomiasis","termid":"MONDO:0000940"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human African trypanosomiasis","secondary_identifiers":["DOID:10112","MedDRA:10001461","Orphanet:3385","EFO:0005225","GARD:7826","UMLS:C0041228","MEDGEN:21714","NCIT:C84541","SCTID:27031003","MESH:D014353","ICD9:086.5","MONDO:0018073"],"synonyms":[{"name":"Africam sleeping sickness","type":"exact"},{"name":"African sleeping sickness","type":"exact"},{"name":"African trypanosomiasis","type":"exact"},{"name":"sleeping sickness","type":"exact"}],"termid":"MONDO:0005459","xrefs":{"Monarch":{"xref_id":"0005459"}}}


id: MONDO:0044241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mydriatic response to pharmacologic agents (obsolete MONDO:0044241)","secondary_identifiers":["OMIM:159410"],"synonyms":[{"name":"mydriatic response to pharmacologic agents","type":"related"}],"termid":"MONDO:0044241","xrefs":{"Monarch":{"xref_id":"0044241"}}}


id: PR:O59817
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- efr3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein efr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.08","synonyms":[{"name":"Spom972h-efr3","type":"exact"}],"termid":"PR:O59817"}


id: GO:0010499
data:
  {"annotated_genes":["SJAG_02625","SJAG_00591","SJAG_05252","SJAG_00837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71066,75642,77282,79340],"is_not":false,"summary":null,"term":"GO:0010499"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds that is mediated by the proteasome but do not involve ubiquitin.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00591":null,"SJAG_00837":null,"SJAG_02625":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"proteasomal ubiquitin-independent protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0010499","terms_by_termid":{"GO:0010499":null}}


id: MOD:01853
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-lysinoalanine either by forming a cross-link with peptidyl-cysteine or peptidyl-serine, or by condensation with free serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysinoalanine","termid":"MOD:01853"}


id: PBO:0001277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex subunit Swc4","termid":"PBO:0001277"}


id: GO:0106098
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts both as N-acetylglutamate synthase (NAGS) catalysing the production of N-Acetylglutamate from glutamate and acetyl-CoA, and as N-acetylglutamate kinase (NAGK) catalysing the reaction ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamyl 5-phosphate.","definition_xrefs":["PMID:11553611","GOC:lnp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetyltransferase complex","termid":"GO:0031248"},{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"NAGS/NAGK complex","termid":"GO:0106098"}


id: GO:1990151
data:
  {"annotated_genes":["SJAG_02392","SJAG_01373","SJAG_03915","SJAG_03011","SJAG_00851","SJAG_01196"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96186,91303],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903067"},{"annotations":[114352,91636,116482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990896"},{"annotations":[104063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at the cell tip.","definition_xrefs":["PMID:22768263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00851":null,"SJAG_01196":null,"SJAG_01373":null,"SJAG_02392":null,"SJAG_03011":null,"SJAG_03915":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to cell tip","type":"exact"}],"termid":"GO:1990151","terms_by_termid":{"GO:0099117":null,"GO:1903067":null,"GO:1990896":null}}


id: GO:1900558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving austinol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"austinol metabolic process","synonyms":[{"name":"austinol metabolism","type":"exact"}],"termid":"GO:1900558"}


id: MONDO:0014289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Macrocephaly-developmental delay syndrome is a rare, intellectual disability syndrome characterized by macrocephaly, mild dysmorphic features (frontal bossing, long face, hooded eye lids with small, downslanting palpebral fissures, broad nasal bridge, and prominent chin), global neurodevelopmental delay, behavioral abnormalities (e.g. anxiety, stereotyped movements) and absence or generalized tonic-clonic seizures. Additional features reported in some patients include craniosynostosis, fifth finger clinodactyly, recurrent pneumonia, and hepatosplenomegally.","definition_xrefs":["Orphanet:397612"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrocephaly-developmental delay syndrome","secondary_identifiers":["DOID:0081206","GARD:17630","MEDGEN:816555","OMIM:615637","UMLS:C3810225"],"synonyms":[{"name":"MRT41","type":"related"},{"name":"intellectual disability, autosomal recessive 41","type":"related"},{"name":"intellectual disability, autosomal recessive type 41","type":"exact"},{"name":"mental retardation, autosomal recessive 41","type":"related"},{"name":"mental retardation, autosomal recessive type 41","type":"exact"}],"termid":"MONDO:0014289","xrefs":{"Monarch":{"xref_id":"0014289"}}}


id: GO:0044182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a group of unicellular organisms grow in a threadlike, filamentous shape.","definition_xrefs":["GOC:mtg_cambridge_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"}


id: GO:0097560
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the left caudal basal body, extending cytoplasmically and exiting at the posterior end of the cell body.","definition_xrefs":["GOC:giardia","ISBN:9780124260207","PMID:5961344","PMID:16607022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left caudal flagellum","synonyms":[{"name":"left caudal cilium","type":"exact"}],"termid":"GO:0097560"}


id: MONDO:0022691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebello-olivary atrophy","synonyms":[{"name":"Cerebelloolivary atrophy","type":"related"}],"termid":"MONDO:0022691","xrefs":{"Monarch":{"xref_id":"0022691"}}}


id: MONDO:0004975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive, neurodegenerative disease characterized by loss of function and death of nerve cells in several areas of the brain leading to loss of cognitive function such as memory and language.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dementia","termid":"MONDO:0001627"},{"relation_name":"is_a","term_name":"tauopathy","termid":"MONDO:0005574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Alzheimer disease","secondary_identifiers":["ICD9:290.1","HP:0002511","ICD10CM:G30","MESH:D000544","icd11.foundation:1611724421","DOID:10652","ICD9:331.0","NIFSTD:birnlex_2092","MEDGEN:1853","UMLS:C0002395","SCTID:142811000119104","NCIT:C2866","Orphanet:238616"],"synonyms":[{"name":"AD","type":"exact"},{"name":"Alzheimer dementia","type":"exact"},{"name":"Alzheimer disease","type":"exact"},{"name":"Alzheimer disease, familial","type":"narrow"},{"name":"Alzheimer's dementia","type":"exact"},{"name":"Alzheimer's disease","type":"exact"},{"name":"Alzheimers dementia","type":"exact"},{"name":"Alzheimers disease","type":"exact"},{"name":"presenile and senile dementia","type":"exact"}],"termid":"MONDO:0004975","xrefs":{"Monarch":{"xref_id":"0004975"}}}


id: MONDO:0006629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Noninflammatory degenerative disease of the hip joint which usually appears in late middle or old age. It is characterized by growth or maturational disturbances in the femoral neck and head, as well as acetabular dysplasia. A dominant symptom is pain on weight-bearing or motion.","definition_xrefs":["MESH:D015207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis","termid":"MONDO:0005178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, hip","secondary_identifiers":["UMLS:C0029410","NCIT:C34876","EFO:1000786","MEDGEN:14530"],"synonyms":[{"name":"hip osteoarthritis","type":"exact"}],"termid":"MONDO:0006629","xrefs":{"Monarch":{"xref_id":"0006629"}}}


id: PBO:0063394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6IP pseudogene 1","termid":"PBO:0063394"}


id: FYECO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zymolyase was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ zymolyase","termid":"FYECO:0000298"}


id: GO:1905014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 'de novo' NAD biosynthetic process from L-tryptophan.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of L-tryptophan metabolic process","termid":"GO:0090358"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide biosynthetic process","termid":"GO:1900373"},{"relation_name":"is_a","term_name":"positive regulation of NAD metabolic process","termid":"GO:1902690"},{"relation_name":"is_a","term_name":"regulation of 'de novo' NAD biosynthetic process from L-tryptophan","termid":"GO:1905012"},{"relation_name":"positively_regulates","term_name":"'de novo' NAD biosynthetic process from L-tryptophan","termid":"GO:0034354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086","GO:0006520"],"is_obsolete":false,"name":"positive regulation of 'de novo' NAD biosynthetic process from L-tryptophan","synonyms":[{"name":"activation of 'de novo' NAD biosynthetic process from tryptophan","type":"narrow"},{"name":"activation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"positive regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"broad"},{"name":"positive regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"up regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"up regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"up-regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"up-regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"upregulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"upregulation of de novo NAD biosynthetic process from tryptophan","type":"related"}],"termid":"GO:1905014"}


id: GO:1903076
data:
  {"annotated_genes":["SJAG_04597","SJAG_03970","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[94747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[96187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to plasma membrane.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:TermGenie","GOC:rl","PMID:11602640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1905963","GO:0090003"],"synonyms":[{"name":"regulation of establishment of protein localisation in plasma membrane","type":"related"},{"name":"regulation of establishment of protein localization in plasma membrane","type":"related"},{"name":"regulation of establishment of protein localization to plasma membrane","type":"related"},{"name":"regulation of protein localisation in plasma membrane","type":"related"},{"name":"regulation of protein localization in plasma membrane","type":"exact"},{"name":"regulation of protein targeting to plasma membrane","type":"related"},{"name":"regulation of protein-plasma membrane targeting","type":"related"}],"termid":"GO:1903076","terms_by_termid":{"GO:0042997":null,"GO:0140325":null,"GO:1903077":null}}


id: PBO:0058210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4502","termid":"PBO:0058210"}


id: MONDO:0009041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A recessive syndrome characterized by craniosynostosis, intellectual disability, seizures, choroidal coloboma, dysplastic kidneys, bat ears, cleft lip and palate, and beaked nose.","definition_xrefs":["PMID:7172471"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"excluded_subClassOf","term_name":"coloboma","termid":"MONDO:0001476"},{"relation_name":"excluded_subClassOf","term_name":"cystic kidney disease","termid":"MONDO:0002473"},{"relation_name":"excluded_subClassOf","term_name":"cleft lip","termid":"MONDO:0004747"},{"relation_name":"excluded_subClassOf","term_name":"cleft palate","termid":"MONDO:0016064"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniosynostosis-intellectual disability-clefting syndrome","secondary_identifiers":["OMIM:218650","MEDGEN:387829","UMLS:C1857472","MESH:C537906","MESH:C565663"],"synonyms":[{"name":"Baraitser Rodeck garner syndrome","type":"exact"},{"name":"craniosynostosis intellectual disability clefting syndrome","type":"related"},{"name":"craniosynostosis mental retardation clefting syndrome","type":"related"},{"name":"craniosynostosis, intellectual disability, seizures, choroidal coloboma, dysplastic kidneys, bat ears, cleft lip and palate, and beaked nose","type":"related"},{"name":"craniosynostosis, mental retardation, seizures, choroidal coloboma, dysplastic kidneys, bat ears, cleft lip and palate, and beaked nose","type":"related"},{"name":"craniosynostosis-intellectual disability-clefting syndrome","type":"exact"},{"name":"craniosynostosis-mental retardation-clefting syndrome","type":"exact"}],"termid":"MONDO:0009041","xrefs":{"Monarch":{"xref_id":"0009041"}}}


id: PBO:0068794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 31, pseudogene","termid":"PBO:0068794"}


id: GO:0010359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anion channel activity.","definition_xrefs":["PMID:17319842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transmembrane transport","termid":"GO:1903959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of anion channel activity","termid":"GO:0010359"}


id: MONDO:0011527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth disease type 4E (CMT4E) is a congenital, hypomyelinating subtype of Charcot-Marie-Tooth disease type 4 characterized by a Dejerine-Sottas syndrome-like phenotype (incl. hypotonia and/or delayed motor development in infancy), extremely slow nerve conduction velocities, potential respiratory dysfunction, cranial nerve involvement, and the typical CMT phenotype, i.e. distal muscle weakness and atrophy, sensory loss, and foot deformity.","definition_xrefs":["Orphanet:99951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 4","termid":"MONDO:0018995"},{"relation_name":"is_a","term_name":"neuropathy, congenital hypomelinating","termid":"MONDO:0033352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 4E","secondary_identifiers":["UMLS:C4721436","DOID:0110195","icd11.foundation:225958466","SCTID:763135001","GARD:9203","MEDGEN:1648303","MESH:C535301","OMIM:605253","NORD:1506"],"synonyms":[{"name":"CHN","type":"related"},{"name":"CHN1","type":"related"},{"name":"CMT 4E","type":"related"},{"name":"CMT4E","type":"exact"},{"name":"Charcot Marie Tooth disease type 4E","type":"related"},{"name":"Charcot-Marie-Tooth disease type 4E","type":"exact"},{"name":"Charcot-Marie-Tooth disease, type 4E","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy type 4E","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 4E","type":"related"},{"name":"NEUROPATHY, CONGENITAL HYPOMYELINATING, 1, AUTOSOMAL RECESSIVE","type":"related"},{"name":"Neuropathy, Congenital Hypomyelination","type":"exact"},{"name":"autosomal recessive congenital hypomyelinating neuropathy","type":"exact"},{"name":"autosomal recessive congenital hypomyelinating or amyelinating neuropathy","type":"exact"},{"name":"congenital hypomyelinating neuropathy (CHN)","type":"related"},{"name":"congenital hypomyelination neuropathy","type":"related"},{"name":"hypomyelinating neuropathy, congenital, 1","type":"exact"},{"name":"hypomyelination, Severe congenital","type":"related"},{"name":"neuropathy, congenital hypomyelinating","type":"related"},{"name":"neuropathy, congenital hypomyelinating or AMYELINATING, autosomal recessive","type":"related"},{"name":"neuropathy, congenital hypomyelinating, 1","type":"exact"},{"name":"neuropathy, congenital hypomyelinating, autosomal dominant","type":"related"}],"termid":"MONDO:0011527","xrefs":{"Monarch":{"xref_id":"0011527"}}}


id: GO:0007506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the gonadal mesoderm over time, from its formation to the mature structure. The gonadal mesoderm is the middle layer of the three primary germ layers of the embryo which will go on to form the gonads of the organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"mesoderm development","termid":"GO:0007498"},{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"part_of","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gonadal mesoderm development","termid":"GO:0007506"}


id: GO:0019776
data:
  {"annotated_genes":["SJAG_06309","SJAG_01561","SJAG_03136"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72659,110080,110586],"is_not":false,"summary":null,"term":"GO:0019776"}]},"cv_name":"molecular_function","definition":"Catalysis of the covalent attachment of the ubiquitin-like protein Atg8 family modifier to phosphatidylethanolamine or phosphatidylserine on a membrane.","definition_xrefs":["PMID:12826404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01561":null,"SJAG_03136":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0140096","GO:0003824","GO:0019787"],"is_obsolete":false,"name":"Atg8-family ligase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5681981"],"synonyms":[{"name":"APG8 ligase activity","type":"exact"},{"name":"Atg8 ligase activity","type":"narrow"},{"name":"Atg8-like ligase activity","type":"exact"}],"termid":"GO:0019776","terms_by_termid":{"GO:0019776":null}}


id: GO:0051370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to Z-band alternatively spliced PDZ motif protein (ZASP). ZASP is a Z-band protein specifically expressed in heart and skeletal muscle. This protein contains N-terminal PDZ domain and C-terminal LIM domain.","definition_xrefs":["PMID:11699871","PMID:10427098"],"gene_count":0,"genotype_count":0,"name":"obsolete ZASP binding (obsolete GO:0051370)","synonyms":[{"name":"Z-band alternatively spliced PDZ-motif protein binding","type":"exact"},{"name":"ZASP binding","type":"exact"}],"termid":"GO:0051370"}


id: MONDO:0013877
data:
  {"annotated_genes":["SJAG_01924"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86513],"is_not":false,"summary":null,"term":"MONDO:0013877"}]},"cv_name":"mondo","definition":"An autosomal recessive metabolic disorder characterized by delayed psychomotor development and lactic acidosis with a normal lactate/pyruvate ratio resulting from impaired mitochondrial pyruvate oxidation.","definition_xrefs":["PMID:22628558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"pyruvate metabolism disorder","termid":"MONDO:0016789"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01924":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"mitochondrial pyruvate carrier deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:447784","MEDGEN:766521","UMLS:C3553607","DOID:0080363","GARD:17771","OMIM:614741"],"synonyms":[{"name":"MPYCD","type":"related"},{"name":"mitochondrial pyruvate carrier deficiency","type":"exact"}],"termid":"MONDO:0013877","terms_by_termid":{"MONDO:0013877":null},"xrefs":{"Monarch":{"xref_id":"0013877"}}}


id: PBO:0089103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auxin family transmembrane transporter","termid":"PBO:0089103"}


id: PBO:0050198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 15","termid":"PBO:0050198"}


id: SO:0000421
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inverted repeat (SO:0000294) occurring at the 3-prime termini of a DNA transposon.","direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat","termid":"SO:0000481"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_terminal_inverted_repeat","synonyms":[{"name":"3' TIR","type":"exact"},{"name":"three prime terminal inverted repeat","type":"exact"}],"termid":"SO:0000421"}


id: PBO:0058191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4484","termid":"PBO:0058191"}


id: PBO:0047645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 2","termid":"PBO:0047645"}


id: PBO:0047215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 223 member A","termid":"PBO:0047215"}


id: PR:Q9URT8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3402 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URT8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L34-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.15","synonyms":[{"name":"60S ribosomal protein L34-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl3402","type":"exact"}],"termid":"PR:Q9URT8"}


id: PBO:0038937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 5 (class III), chi polypeptide","termid":"PBO:0038937"}


id: FYPO:0004077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype that results in the formation of an ascus that contains a single spore that is larger than normal.","definition_xrefs":["PomBase:vw","PMID:15331764","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus with fewer than four spores","termid":"FYPO:0003066"},{"relation_name":"output_of","term_name":"abolished meiosis I","termid":"FYPO:0003378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000121","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with single large spore","synonyms":[{"name":"abnormal ascospore formation resulting in formation of ascus with single large spore","type":"exact"},{"name":"abnormal sporulation resulting in formation of single-spored asci","type":"exact"}],"termid":"FYPO:0004077"}


id: MONDO:0015983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare genetic syndromic intellectual disability.","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic syndromic intellectual disability (obsolete MONDO:0015983)","secondary_identifiers":["Orphanet:183763"],"synonyms":[{"name":"rare genetic syndromic intellectual disability","type":"exact"}],"termid":"MONDO:0015983","xrefs":{"Monarch":{"xref_id":"0015983"}}}


id: GO:0033299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of lysosomal enzymes by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"secretion of lysosomal enzymes","termid":"GO:0033299"}


id: PBO:0050528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hippocalcin","termid":"PBO:0050528"}


id: _global:host_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"_global:symbiotically_interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"host_of","secondary_identifiers":["RO:0002453"],"termid":"_global:host_of"}


id: MONDO:0971014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class II deficiency","termid":"MONDO:0008855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"MHC class II deficiency 3","secondary_identifiers":["MEDGEN:347175","UMLS:C1859536","OMIM:620816"],"termid":"MONDO:0971014","xrefs":{"Monarch":{"xref_id":"0971014"}}}


id: PBO:0061321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member A8","termid":"PBO:0061321"}


id: GO:0099631
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cytoplasmic component of the postsynaptic endocytic zone.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"postsynaptic endocytic zone","termid":"GO:0098843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"postsynaptic endocytic zone cytoplasmic component","termid":"GO:0099631"}


id: FYPO:0007274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitochondrion inheritance is abnormal. Mitochondrion inheritance is a cellular process that results in the distribution of mitochondria into daughter cells after mitosis or meiosis, mediated by interactions between mitochondria and the cytoskeleton.","definition_xrefs":["PomBase:mah","GO:0000001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal mitochondrion inheritance","synonyms":[{"name":"abnormal mitochondrial inheritance","type":"exact"}],"termid":"FYPO:0007274"}


id: PBO:0051874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISM1 antisense RNA 1","termid":"PBO:0051874"}


id: PBO:0067879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 181","termid":"PBO:0067879"}


id: MONDO:0032941
data:
  {"annotated_genes":["SJAG_03233"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85856],"is_not":false,"summary":null,"term":"MONDO:0032941"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 27","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1719756","OMIM:618827","UMLS:C5394215"],"synonyms":[{"name":"MYOPIA 27","type":"related"},{"name":"MYP27","type":"related"}],"termid":"MONDO:0032941","terms_by_termid":{"MONDO:0032941":null},"xrefs":{"Monarch":{"xref_id":"0032941"}}}


id: PBO:0110405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYGO2 and SHC1 antisense RNA 1","termid":"PBO:0110405"}


id: GO:0047896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylulose 5-phosphate + formaldehyde = glyceraldehyde 3-phosphate + glycerone.","definition_xrefs":["MetaCyc:FORMALDEHYDE-TRANSKETOLASE-RXN","EC:2.2.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016744"}],"interesting_parent_ids":["GO:0016744","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"formaldehyde transketolase activity","secondary_identifiers":["RHEA:24264"],"synonyms":[{"name":"D-xylulose-5-phosphate:formaldehyde glycolaldehydetransferase activity","type":"related"},{"name":"DHAS activity","type":"related"},{"name":"dihydroxyacetone synthase activity","type":"related"},{"name":"glycerone synthase activity","type":"related"}],"termid":"GO:0047896"}


id: PBO:0003981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR7 ortholog","termid":"PBO:0003981"}


id: MONDO:0007468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete DNA, satellite, alpha type (obsolete MONDO:0007468)","secondary_identifiers":["OMIM:126410"],"synonyms":[{"name":"DNA, satellite, alpha type","type":"exact"}],"termid":"MONDO:0007468","xrefs":{"Monarch":{"xref_id":"0007468"}}}


id: PBO:0054944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2358","termid":"PBO:0054944"}


id: PATO:0000977
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000977 absolute permeability value (obsolete PATO:0000977)","termid":"PATO:0000977"}


id: FYPO:0003844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation does not occur over all or part of the chromosomes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome condensation","termid":"FYPO:0000214"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000337","FYPO:0000293","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"abolished mitotic chromosome condensation","synonyms":[{"name":"abolished chromosome condensation during mitotic cell cycle","type":"related"},{"name":"abolished mitotic chromosome condensation during vegetative growth","type":"exact"},{"name":"mitotic chromosome condensation abolished","type":"exact"}],"termid":"FYPO:0003844"}


id: MONDO:0010866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by osteopetrosis, agenesis of the corpus callosum, cerebral atrophy and a small hippocampus.","definition_xrefs":["Orphanet:85179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis","termid":"MONDO:0017198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile osteopetrosis with neuroaxonal dysplasia","secondary_identifiers":["UMLS:C1838258","DOID:0070343","MEDGEN:373924","MESH:C536055","icd11.foundation:1434293148","GARD:10082","SCTID:724226009","OMIM:600329"],"synonyms":[{"name":"osteopetrosis and infantile neuroaxonal dystrophy","type":"related"}],"termid":"MONDO:0010866","xrefs":{"Monarch":{"xref_id":"0010866"}}}


id: PBO:0005415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase Meu8 (predicted)","termid":"PBO:0005415"}


id: PR:Q9Y7Q1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lto1 gene.","definition_xrefs":["UniProtKB:Q9Y7Q1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ORAOV1 family protein C191.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.08","synonyms":[{"name":"Spom972h-lto1","type":"exact"}],"termid":"PR:Q9Y7Q1"}


id: GO:0051233
data:
  {"annotated_genes":["SJAG_01805","SJAG_00762","SJAG_03959","SJAG_00930","SJAG_03345","SJAG_03073","SJAG_00697","SJAG_00082","SJAG_01371","SJAG_00840","SJAG_04464","SJAG_01909","SJAG_02045","SJAG_04412","SJAG_00723","SJAG_02336","SJAG_01297","SJAG_01837","SJAG_03048","SJAG_04140","SJAG_02266","SJAG_04745","SJAG_01429","SJAG_04841","SJAG_02542"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101740,103851,118987,116963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990385"},{"annotations":[108558,111319,111496,112199,116964,117874,100854,101366,94131,90329,95104,103853,76680,115456,91318,118989,103971,96089,92263,91719,102664,77538,89597,89960,79247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990023"}]},"cv_name":"cellular_component","definition":"The area in the center of the spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PMID:15296749","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle","termid":"GO:0005819"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00697":null,"SJAG_00723":null,"SJAG_00762":null,"SJAG_00840":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01429":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01909":null,"SJAG_02045":null,"SJAG_02266":null,"SJAG_02336":null,"SJAG_02542":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03345":null,"SJAG_03959":null,"SJAG_04140":null,"SJAG_04412":null,"SJAG_04464":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"spindle midzone","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"central spindle","type":"exact"},{"name":"spindle equator","type":"exact"}],"termid":"GO:0051233","terms_by_termid":{"GO:1990023":null,"GO:1990385":null}}


id: PBO:0084395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0084395"}


id: MONDO:0018476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"combined dystonia","termid":"MONDO:0020065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia-aphonia syndrome","secondary_identifiers":["MEDGEN:1675660","UMLS:C5190573","Orphanet:412217","GARD:21739"],"termid":"MONDO:0018476","xrefs":{"Monarch":{"xref_id":"0018476"}}}


id: MONDO:0005320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic or pathological injury to the tibia in which the continuity of the bone is broken.","definition_xrefs":["EFO:0003944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tibia fracture","secondary_identifiers":["SCTID:31978002","MESH:D013978"],"synonyms":[{"name":"bone fracture of tibia","type":"exact"},{"name":"tibia bone fracture","type":"exact"}],"termid":"MONDO:0005320","xrefs":{"Monarch":{"xref_id":"0005320"}}}


id: PATO:0001365
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having spines, thorns or similar thin projections on its surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spiny","termid":"PATO:0001365"}


id: MONDO:0016135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary neurologic disease with peripheral neuropathy (obsolete MONDO:0016135)","secondary_identifiers":["Orphanet:207025"],"termid":"MONDO:0016135","xrefs":{"Monarch":{"xref_id":"0016135"}}}


id: MONDO:0005465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal mental state resulting from an abuse of methamphetamine","definition_xrefs":["EFO:0005242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychotic disorder","termid":"MONDO:0005485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"methamphetamine-induced psychosis","termid":"MONDO:0005465","xrefs":{"Monarch":{"xref_id":"0005465"}}}


id: PBO:0028953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_cell_during_recovery_from_stationary_phase","termid":"PBO:0028953"}


id: GO:0039619
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=4 symmetry. The T=4 capsid is composed of 12 pentameric and 30 hexameric capsomeres.","definition_xrefs":["VZ:808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=4 icosahedral viral capsid","termid":"GO:0039619"}


id: MONDO:0035642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited acute myeloid leukemia","termid":"MONDO:0017893"},{"relation_name":"is_a","term_name":"mixed phenotype acute leukemia","termid":"MONDO:0020743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"mixed phenotype acute leukemia with t(v;11q23.3)","secondary_identifiers":["GARD:22357","MEDGEN:443130","Orphanet:589595","NCIT:C82203","UMLS:C2826048","ICD10CM:C92.6"],"synonyms":[{"name":"MPAL with t(v;11q23.3); KMT2A rearranged","type":"exact"},{"name":"MPAL with t(v;11q23.3); MLL rearranged","type":"exact"}],"termid":"MONDO:0035642","xrefs":{"Monarch":{"xref_id":"0035642"}}}


id: PBO:0091605
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2 sequence errors 5368262TC->T 5368273 and G->GT would change amino acids PPIYGL to PPYTVL","termid":"PBO:0091605"}


id: PBO:0063518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDXDC2P-NPIPB14P readthrough, transcribed pseudogene","termid":"PBO:0063518"}


id: PBO:0079313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 6B","termid":"PBO:0079313"}


id: GO:0045589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of differentiation of regulatory T cells.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"regulates","term_name":"regulatory T cell differentiation","termid":"GO:0045066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of regulatory T cell differentiation","secondary_identifiers":["Reactome:R-HSA-8877330"],"synonyms":[{"name":"regulation of regulatory T cell development","type":"related"},{"name":"regulation of regulatory T lymphocyte differentiation","type":"exact"},{"name":"regulation of regulatory T-cell differentiation","type":"exact"},{"name":"regulation of regulatory T-lymphocyte differentiation","type":"exact"},{"name":"regulation of suppressor T cell differentiation","type":"exact"},{"name":"regulation of suppressor T lymphocyte differentiation","type":"exact"},{"name":"regulation of suppressor T-cell differentiation","type":"exact"},{"name":"regulation of suppressor T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045589"}


id: PBO:0028186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_in_plasma_membrane","termid":"PBO:0028186"}


id: MONDO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign papillary neoplasm that arises from the vagina and is characterized by the presence of a fibrovascular stalk lined by normal squamous epithelium. There is no evidence of atypia or relation to human papillomavirus.","definition_xrefs":["NCIT:C6374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign vaginal neoplasm","termid":"MONDO:0000647"},{"relation_name":"is_a","term_name":"vaginal squamous tumor","termid":"MONDO:0001806"},{"relation_name":"is_a","term_name":"squamous papilloma","termid":"MONDO:0001825"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal squamous papilloma","secondary_identifiers":["UMLS:C1336943","DOID:137","MEDGEN:234983"],"synonyms":[{"name":"squamous papilloma of the vagina","type":"exact"},{"name":"squamous papilloma of vagina","type":"exact"},{"name":"vagina squamous papilloma","type":"exact"},{"name":"vaginal squamous papilloma","type":"exact"}],"termid":"MONDO:0001779","xrefs":{"Monarch":{"xref_id":"0001779"}}}


id: GO:0015539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: hexuronate(out) + cation(out) = hexuronate(in) + cation(in). The hexuronate may be glucuronate or galacturonate.","definition_xrefs":["TC:2.A.1.14.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"hexuronate:monoatomic cation symporter activity","synonyms":[{"name":"hexuronate (glucuronate/galacturonate) porter activity","type":"narrow"},{"name":"hexuronate porter activity","type":"related"},{"name":"hexuronate:cation symporter activity","type":"broad"}],"termid":"GO:0015539"}


id: PBO:0088170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing protein of unknown function; binds to Mca1p, a caspase-related protease that regulates H2O2-induced apoptosis; overexpression causes G1 phase growth arrest and clonal death that is suppressed by overexpression of MCA1","termid":"PBO:0088170"}


id: GO:1900604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tensidol A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"tensidol A metabolic process","termid":"GO:1900603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"tensidol A catabolic process","synonyms":[{"name":"tensidol A breakdown","type":"exact"},{"name":"tensidol A catabolism","type":"exact"},{"name":"tensidol A degradation","type":"exact"}],"termid":"GO:1900604"}


id: GO:0046606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the centrosome cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of centrosome cycle","termid":"GO:0046605"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"negatively_regulates","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of centrosome cycle","synonyms":[{"name":"down regulation of centrosome cycle","type":"exact"},{"name":"down-regulation of centrosome cycle","type":"exact"},{"name":"downregulation of centrosome cycle","type":"exact"},{"name":"inhibition of centrosome cycle","type":"narrow"}],"termid":"GO:0046606"}


id: PBO:0028494
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_degradation_via_N-end_rule_pathway_during_meiosis","termid":"PBO:0028494"}


id: PBO:0085882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in and induced by the endoplasmic reticulum unfolded protein response (UPR); SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0085882"}


id: GO:0033798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,3',5'-triiodo-L-thyronine + iodide + acceptor + H+ = L-thyroxine + acceptor-H2.","definition_xrefs":["RHEA:18897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"thyroxine 5-deiodinase activity","secondary_identifiers":["EC:1.21.99.3","MetaCyc:1.97.1.11-RXN"],"synonyms":[{"name":"acceptor:3,3',5'-triiodo-L-thyronine oxidoreductase (iodinating) activity","type":"related"},{"name":"diiodothyronine 5'-deiodinase activity","type":"broad"},{"name":"inner ring-deiodinating pathway","type":"exact"},{"name":"iodothyronine 5-deiodinase activity","type":"related"},{"name":"iodothyronine inner ring monodeiodinase activity","type":"related"},{"name":"type III iodothyronine deiodinase activity","type":"narrow"}],"termid":"GO:0033798"}


id: PBO:0053158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDLR antisense RNA 1","termid":"PBO:0053158"}


id: SO:0001556
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which increases the translational product level with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_level_variant","termid":"SO:0001553"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_translational_product_level","synonyms":[{"name":"increase translational product level","type":"exact"}],"termid":"SO:0001556"}


id: GO:0032093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SAM (Sterile Alpha Motif) domain, which is a 70-amino acid protein sequence that participates in protein-protein, protein-lipid, and protein-RNA interactions and is conserved from lower to higher eukaryotes.","definition_xrefs":["GOC:mcc","PMID:16337230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"SAM domain binding","synonyms":[{"name":"Sterile Alpha Motif domain binding","type":"exact"}],"termid":"GO:0032093"}


id: PBO:0089159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L13","termid":"PBO:0089159"}


id: MONDO:0021298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the oropharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx carcinoma in situ","termid":"MONDO:0000372"},{"relation_name":"is_a","term_name":"oropharyngeal carcinoma","termid":"MONDO:0044926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma in situ of oropharynx","secondary_identifiers":["NCIT:C4590","icd11.foundation:364791852","MEDGEN:83852","SCTID:92668003","UMLS:C0347099"],"synonyms":[{"name":"carcinoma in situ of oropharynx","type":"exact"},{"name":"carcinoma in situ of the oropharynx","type":"exact"},{"name":"oropharyngeal cancer stage 0","type":"exact"},{"name":"oropharyngeal carcinoma in situ","type":"exact"},{"name":"oropharynx carcinoma in situ","type":"exact"},{"name":"oropharynx in situ carcinoma","type":"exact"},{"name":"stage 0 carcinoma of oropharynx","type":"exact"},{"name":"stage 0 carcinoma of the oropharynx","type":"exact"},{"name":"stage 0 oropharyngeal cancer","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma aJCC v6","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma aJCC v6 and v7","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma aJCC v7","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma in situ","type":"exact"},{"name":"stage 0 oropharyngeal throat cancer","type":"exact"},{"name":"stage 0 oropharynx carcinoma","type":"exact"}],"termid":"MONDO:0021298","xrefs":{"Monarch":{"xref_id":"0021298"}}}


id: GO:0019556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-histidine into other compounds, including glutamate and formamide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"L-histidine catabolic process","termid":"GO:0006548"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"},{"relation_name":"is_a","term_name":"formamide metabolic process","termid":"GO:0043606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-histidine catabolic process to glutamate and formamide","secondary_identifiers":["MetaCyc:HISDEG-PWY"],"synonyms":[{"name":"histidine breakdown to glutamate and formamide","type":"exact"},{"name":"histidine catabolic process to glutamate and formamide","type":"broad"},{"name":"histidine degradation to glutamate and formamide","type":"exact"}],"termid":"GO:0019556"}


id: PBO:0059018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 7","termid":"PBO:0059018"}


id: PBO:0063708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 2 like 1","termid":"PBO:0063708"}


id: MONDO:0014895
data:
  {"annotated_genes":["SJAG_04351"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86484],"is_not":false,"summary":null,"term":"MONDO:0014895"}]},"cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the GUF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infantile spasms","termid":"MONDO:0018097"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 40","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310737","DOID:0080427","GARD:16182","MEDGEN:934704","OMIM:617065"],"synonyms":[{"name":"DEE40","type":"exact"},{"name":"EIEE40","type":"exact"},{"name":"GUF1 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 40","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in GUF1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 40","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 40; EIEE40","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 40","type":"exact"}],"termid":"MONDO:0014895","terms_by_termid":{"MONDO:0014895":null},"xrefs":{"Monarch":{"xref_id":"0014895"}}}


id: PBO:0062244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BK member 1 pseudogene","termid":"PBO:0062244"}


id: GO:0018504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-1,2-dihydrobenzene-1,2-diol + NAD+ = catechol + NADH + H+.","definition_xrefs":["EC:1.3.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cis-1,2-dihydrobenzene-1,2-diol dehydrogenase activity","secondary_identifiers":["RHEA:15457","UM-BBD_enzymeID:r0080","MetaCyc:1.3.1.19-RXN"],"synonyms":[{"name":"cis-1,2-dihydrobenzene-1,2-diol:NAD+ oxidoreductase activity","type":"related"},{"name":"cis-1,2-dihydrocyclohexa-3,5-diene (nicotinamide adenine dinucleotide) oxidoreductase activity","type":"related"},{"name":"cis-benzene glycol dehydrogenase activity","type":"related"}],"termid":"GO:0018504"}


id: MONDO:0002989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm composed of fibroblastic spindle cells in a whorled storiform pattern. It is characterized by the presence of foam cells, inflammatory cells, hemosiderin deposition and stromal hemorrhage.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytoma","termid":"MONDO:0005509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign fibrous histiocytoma","secondary_identifiers":["ICDO:8830/0","NCIT:C3739","UMLS:C0206644","MEDGEN:60199","MESH:D018219","DOID:4415"],"synonyms":[{"name":"benign fibrous histiocytoma","type":"exact"},{"name":"benign fibrous histiocytoma (morphologic abnormality)","type":"exact"},{"name":"fibrous histiocytoma","type":"exact"},{"name":"fibrous histiocytoma NOS (morphologic abnormality)","type":"exact"},{"name":"fibroxanthoma","type":"exact"},{"name":"fibroxanthoma NOS (morphologic abnormality)","type":"exact"},{"name":"histiocytoma, fibrous, benign","type":"exact"}],"termid":"MONDO:0002989","xrefs":{"Monarch":{"xref_id":"0002989"}}}


id: GO:0099071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microtubule bundle that undergoes changes in length, and in which microtubule sliding takes place.","definition_xrefs":["PMID:26124291","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle","termid":"GO:0097427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dynamic microtubule bundle","termid":"GO:0099071"}


id: GO:0043326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of folate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"response to folic acid","termid":"GO:0051593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to folate","termid":"GO:0043326"}


id: GO:0021872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nerve cells are generated in the forebrain. This includes the production of neuroblasts from and their differentiation into neurons.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of neurons","termid":"GO:0048699"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain generation of neurons","synonyms":[{"name":"generation of neurons in forebrain","type":"exact"}],"termid":"GO:0021872"}


id: PBO:0067361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 460, pseudogene","termid":"PBO:0067361"}


id: MONDO:0024569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy plus syndrome","termid":"MONDO:0014720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328","MONDO:0000426"],"is_obsolete":false,"name":"optic atrophy 8","secondary_identifiers":["DOID:0111439","MEDGEN:898923","OMIM:616648","GARD:16148","UMLS:C4085249"],"synonyms":[{"name":"OPA8","type":"exact"},{"name":"optic atrophy 8","type":"exact"}],"termid":"MONDO:0024569","xrefs":{"Monarch":{"xref_id":"0024569"}}}


id: MONDO:1012206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"paroxysm, non-human animal","termid":"MONDO:1011628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysm, chicken","secondary_identifiers":["OMIA:000772-9031"],"termid":"MONDO:1012206","xrefs":{"Monarch":{"xref_id":"1012206"}}}


id: MONDO:0013150
data:
  {"annotated_genes":["SJAG_04840"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030676"}]},"cv_name":"mondo","definition":"Infantile dystonia-parkinsonism (IPD) is an extremely rare inherited neurological syndrome that presents in early infancy with hypokinetic parkinsonism and dystonia and that can be fatal.","definition_xrefs":["Orphanet:238455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"combined dystonia","termid":"MONDO:0020065"},{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"parkinsonism-dystonia, infantile","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567730","NCIT:C129866","OMIMPS:613135","UMLS:C2751067","MEDGEN:413468","GARD:10484","SCTID:722763000"],"synonyms":[{"name":"IPD","type":"exact"},{"name":"PARKINSONISM-dystonia, infantile","type":"exact"},{"name":"PKDYS","type":"exact"},{"name":"Parkinsonism-dystonia infantile","type":"exact"},{"name":"dopamine transporter deficiency syndrome","type":"exact"},{"name":"infantile Parkinsonism-dystonia","type":"exact"},{"name":"parkinsonism-dystonia, infantile","type":"exact"}],"termid":"MONDO:0013150","terms_by_termid":{"MONDO:0030676":null},"xrefs":{"Monarch":{"xref_id":"0013150"}}}


id: PATO:0001930
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue the bearer's having or exhibiting variation its shape.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability of shape","termid":"PATO:0001929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant shape","termid":"PATO:0001930"}


id: GO:0140282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + lipid II + ATP + H2O = L-glutamate + beta-D-GlcNAc(1->4)-Mur2Ac(oyl-L-Ala-D-isoGln-L-Lys-D-Ala-D-Ala)-diphospho-di-trans,octa-cis-undecaprenol + ADP + phosphate.","definition_xrefs":["PMID:22291598","RHEA:57928","PMID:30154570","PMID:30093673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carbon-nitrogen ligase activity on lipid II","secondary_identifiers":["EC:6.3.5.13"],"synonyms":[{"name":"L-glutamate--lipid II transaminase activity","type":"exact"},{"name":"undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl pentapeptide amidotransferase (glutamine-hydrolyzing) activity","type":"exact"}],"termid":"GO:0140282"}


id: GO:0102554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 S-adenosyl-L-methionine + a [2-oxoglutarate-dehydrogenase E2 protein] N6-octanoyl-L-lysine + 2 a sulfurated [sulfur carrier] = 2 L-methionine + 2 5'-deoxyadenosine + 2 H+ + a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine + 2 an unsulfurated [sulfur carrier].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoyl synthase activity (acting on 2-oxoglutarate-dehydrogenase E2 protein (obsolete GO:0102554)","termid":"GO:0102554"}


id: PBO:0046682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation termination factor 1","termid":"PBO:0046682"}


id: PBO:0071414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 20","termid":"PBO:0071414"}


id: PBO:0002812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I upstream activation factor complex subunit Rrn10","termid":"PBO:0002812"}


id: PBO:0045933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor like GTPase 1","termid":"PBO:0045933"}


id: PBO:0068022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 327","termid":"PBO:0068022"}


id: PATO:0002245
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A force which relative high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"force","termid":"PATO:0001035"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased force","synonyms":[{"name":"increased force amplitude","type":"exact"}],"termid":"PATO:0002245"}


id: PBO:0066458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 11, pseudogene","termid":"PBO:0066458"}


id: GO:0075262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of spore-bearing organ development, a process in which hyphae grow into special aggregates called fruiting bodies that produce new spores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"}


id: PBO:0081468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 341","termid":"PBO:0081468"}


id: PBO:0108946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-C transcription factor pseudogene 3","termid":"PBO:0108946"}


id: PBO:0060791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S2","termid":"PBO:0060791"}


id: GO:0000270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving peptidoglycans, any of a class of glycoconjugates found only in bacterial cell walls and consisting of long glycan strands of alternating residues of beta-(1,4) linked N-acetylglucosamine and N-acetylmuramic acid, cross-linked by short peptides.","definition_xrefs":["PMID:33139480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidoglycan metabolic process","secondary_identifiers":["GO:0009284"],"synonyms":[{"name":"murein metabolic process","type":"exact"},{"name":"murein metabolism","type":"exact"},{"name":"peptidoglycan metabolism","type":"exact"}],"termid":"GO:0000270"}


id: PBO:0085061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity; GTPase activity positively regulated by the GTPase activating protein (GAP) Rgd1p","termid":"PBO:0085061"}


id: MONDO:1010318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GAPO syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAPO syndrome, non-human animal","secondary_identifiers":["OMIA:002544"],"termid":"MONDO:1010318","xrefs":{"Monarch":{"xref_id":"1010318"}}}


id: PBO:0057105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 196a-2","termid":"PBO:0057105"}


id: GO:0086014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in an atrial cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential involved in contraction","termid":"GO:0086002"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell to AV node cell signaling","termid":"GO:0086026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}


id: PBO:0028342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_post-anaphase_array_morphology","termid":"PBO:0028342"}


id: PBO:0083141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps 3' end of ORF HOT1/YMR172W","termid":"PBO:0083141"}


id: PBO:0030466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pantothenate_import","termid":"PBO:0030466"}


id: PBO:0112980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-keto sterol reductase; catalyzes last of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; Erg27 protein is mainly ER-localized in strains devoid of mtDNA (rho° cells); mutants are sterol auxotrophs; mutation is functionally complemented by human HSD17B7","termid":"PBO:0112980"}


id: GO:0140739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a NLRP6 inflammasome complex.","definition_xrefs":["PMID:30674671","PMID:34678144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex assembly","termid":"GO:0140632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"NLRP6 inflammasome complex assembly","termid":"GO:0140739"}


id: PBO:0087396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Strand exchange protein; forms helical filament with DNA that searches for homology; involved in recombinational repair of DNA DSBs during vegetative growth and meiosis; phosphorylation by Cdc28p in G2/M phase promotes DNA binding, strand invasion, and primer extension; L1 and L2 motifs of DNA binding site I have critical roles in ensuring DNA fidelity during meiotic recombination; RAD51 and RAD4 pathways confer resistance to benzo[a]pyrene dihydrodiol; homolog of Dmc1p and bacterial RecA","termid":"PBO:0087396"}


id: MONDO:0014669
data:
  {"annotated_genes":["SJAG_04225"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85441],"is_not":false,"summary":null,"term":"MONDO:0014669"}]},"cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the DRAM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04225":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 21","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16125","UMLS:C4049066","MEDGEN:891534","DOID:0081447","OMIM:616502"],"synonyms":[{"name":"CORD21","type":"related"},{"name":"DRAM2 cone-rod dystrophy","type":"exact"},{"name":"cone-rod dystrophy 21","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in DRAM2","type":"exact"},{"name":"cone-rod dystrophy type 21","type":"exact"},{"name":"retinal dystrophy with early macular involvement","type":"related"}],"termid":"MONDO:0014669","terms_by_termid":{"MONDO:0014669":null},"xrefs":{"Monarch":{"xref_id":"0014669"}}}


id: FYPO:0004303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished phosphatase activity","synonyms":[{"name":"phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0004303"}


id: PBO:0079455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor candidate 8","termid":"PBO:0079455"}


id: MONDO:0000699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete homocarnosinosis (obsolete MONDO:0000699)","termid":"MONDO:0000699","xrefs":{"Monarch":{"xref_id":"0000699"}}}


id: PATO:0001124
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001124 pressure value (obsolete PATO:0001124)","termid":"PATO:0001124"}


id: GO:0039665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Induction of organellar membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with a viral capsid. Results in release of the virus contents from an organelle into the host cell cytoplasm.","definition_xrefs":["VZ:985","GOC:bf","GOC:jl","UniProtKB-KW:KW-1173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"symbiont entry into host cell via permeabilization of host membrane","termid":"GO:0140267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"permeabilization of host organelle membrane involved in viral entry into host cell","synonyms":[{"name":"viral entry into host cell via permeabilization of host organelle membrane","type":"related"},{"name":"viral membrane-penetration protein","type":"related"},{"name":"viral penetration via host endosomal membrane disruption by virus","type":"exact"},{"name":"viral penetration via perforation of host organellar membrane by virus","type":"exact"},{"name":"viral penetration via permeabilization of host organellar membrane","type":"exact"}],"termid":"GO:0039665"}


id: PBO:0060505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 5","termid":"PBO:0060505"}


id: GO:0039551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of host IRF3 (interferon regulatory factor-3) by promoting the ubiquitin-dependent degradation of IRF3, mediated by the proteasome.","definition_xrefs":["VZ:757"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF3 activity by positive regulation of IRF3 catabolic process (obsolete GO:0039551)","synonyms":[{"name":"promotion by virus of proteosome-dependent IRF3 degradation","type":"exact"}],"termid":"GO:0039551"}


id: MONDO:0004265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute, usually bacterial infection affecting the endometrium. It is characterized by the presence of neutrophils or microabscesses in the endometrial glands. Symptoms include fever, lower abdominal pain, and vaginal discharge.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometritis","termid":"MONDO:0000918"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute endometritis","secondary_identifiers":["SCTID:67667007","UMLS:C0238103","DOID:7528","icd11.foundation:1197441046","ICD9:615.0","MEDGEN:68654","NCIT:C27022"],"synonyms":[{"name":"endometritis, acute","type":"exact"}],"termid":"MONDO:0004265","xrefs":{"Monarch":{"xref_id":"0004265"}}}


id: MONDO:0017259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic diseases with anterior uveitis (obsolete MONDO:0017259)","secondary_identifiers":["Orphanet:280926"],"termid":"MONDO:0017259","xrefs":{"Monarch":{"xref_id":"0017259"}}}


id: MONDO:0017721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Sandhoff disease","termid":"MONDO:0010006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0002561","MONDO:0005328","MONDO:0002039","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"Sandhoff disease, infantile form","secondary_identifiers":["MEDGEN:199669","GARD:7604","SCTID:238018004","Orphanet:309155","UMLS:C0751490"],"synonyms":[{"name":"Hexosaminidases A and B deficiency, infantile form","type":"exact"},{"name":"infantile GM2 gangliosidosis 0 variant","type":"exact"}],"termid":"MONDO:0017721","xrefs":{"Monarch":{"xref_id":"0017721"}}}


id: GO:0061123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of positive chemotaxis","termid":"GO:0050928"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP","termid":"GO:0061118"},{"relation_name":"negatively_regulates","term_name":"chemotaxis to cAMP","termid":"GO:0043327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis to cAMP","termid":"GO:0061123"}


id: MONDO:0054804
data:
  {"annotated_genes":["SJAG_03161"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86368],"is_not":false,"summary":null,"term":"MONDO:0054804"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03161":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly 21, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16278","MEDGEN:1646916","UMLS:C4693831","OMIM:617983"],"synonyms":[{"name":"MCPH21","type":"related"},{"name":"microcephaly 21, PRIMARY, autosomal recessive","type":"related"}],"termid":"MONDO:0054804","terms_by_termid":{"MONDO:0054804":null},"xrefs":{"Monarch":{"xref_id":"0054804"}}}


id: MONDO:0007048
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85559],"is_not":false,"summary":null,"term":"MONDO:0007048"}]},"cv_name":"mondo","definition":"A rare genetic skin keratinization disorder with an autosomal dominant mode of inheritance. It is characterized by numerous flesh-colored warty papules on the back of the hands, medial aspect of the feet, knees, and elbows.","definition_xrefs":["NCIT:C27519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis","termid":"MONDO:0006566"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acrokeratosis verruciformis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050606","OMIM:101900","ICD9:757.39","MEDGEN:75589","Orphanet:79151","EFO:1000666","MedDRA:10069445","SCTID:400085009","UMLS:C0265971","GARD:16707"],"synonyms":[{"name":"AKV","type":"related"},{"name":"AKV of Hopf","type":"exact"},{"name":"Hopf disease","type":"exact"},{"name":"acrokeratosis verruciformis","type":"exact"},{"name":"acrokeratosis verruciformis of Hopf","type":"exact"}],"termid":"MONDO:0007048","terms_by_termid":{"MONDO:0007048":null},"xrefs":{"Monarch":{"xref_id":"0007048"}}}


id: GO:0033004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mast cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of mast cell activation","termid":"GO:0033003"},{"relation_name":"negatively_regulates","term_name":"mast cell activation","termid":"GO:0045576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell activation","termid":"GO:0033004"}


id: PBO:0091131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H Rnh1","termid":"PBO:0091131"}


id: PBO:0081801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 730","termid":"PBO:0081801"}


id: PBO:0029666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0029666"}


id: PBO:0058679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6807","termid":"PBO:0058679"}


id: FYPO:0000183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of polyadenylated mRNA from the nucleus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA export from nucleus","termid":"FYPO:0000204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abnormal poly(A)+ mRNA export from nucleus","synonyms":[{"name":"abnormal poly(A)+ mRNA export from nucleus during mitotic cell cycle","type":"related"},{"name":"abnormal poly(A)+ mRNA export from nucleus during vegetative growth","type":"exact"},{"name":"abnormal polyadenylated mRNA export from nucleus","type":"exact"}],"termid":"FYPO:0000183"}


id: PBO:0027179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_heterochromatin_assembly_involved_in_chromatin_silencing_at_centromere_outer_repeat","termid":"PBO:0027179"}


id: GO:0019111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrol + X-SO3(-) = HX + phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrol sulfotransferase activity (obsolete GO:0019111)","synonyms":[{"name":"phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0019111"}


id: MONDO:0004572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An affective disorder characterized by periods of depression and hypomania. These may be separated by periods of normal mood.","definition_xrefs":["MESH:D003527"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"mood disorder","termid":"MONDO:0005371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclothymic disorder","secondary_identifiers":["ICD9:301.10","MEDGEN:1198","ICD9:301.13","ICD10CM:F34.0","UMLS:C0010598","ICD9:301.1","SCTID:76105009","DOID:845","icd11.foundation:1427638883"],"synonyms":[{"name":"affective personality disorder","type":"exact"},{"name":"cycloid personality","type":"exact"},{"name":"cyclothymia","type":"exact"},{"name":"cyclothymic personality","type":"exact"}],"termid":"MONDO:0004572","xrefs":{"Monarch":{"xref_id":"0004572"}}}


id: MONDO:0021047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, malignant, or borderline circumscribed biphasic neoplasm that arises from the breast. It usually affects middle-aged women. It is characterized by the presence of a double layer of epithelial cells that are arranged in clefts, surrounded by a spindle cell mesenchymal (stromal) component.","definition_xrefs":["NCIT:C7575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllodes tumor","termid":"MONDO:0005078"},{"relation_name":"is_a","term_name":"breast fibroepithelial neoplasm","termid":"MONDO:0021046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast phyllodes tumor","secondary_identifiers":["MEDGEN:65943","SCTID:712989008","UMLS:C0238031","ONCOTREE:PT"],"synonyms":[{"name":"breast cystosarcoma phyllodes","type":"exact"},{"name":"breast phyllodes neoplasm","type":"exact"},{"name":"breast phyllodes tumor","type":"exact"},{"name":"cystosarcoma phyllodes of breast","type":"exact"},{"name":"cystosarcoma phyllodes of the breast","type":"exact"},{"name":"cystosarcoma phylloides - breast","type":"exact"},{"name":"cystosarcoma phylloides of the breast","type":"exact"},{"name":"phyllodes breast neoplasm","type":"exact"},{"name":"phyllodes breast tumor","type":"exact"},{"name":"phyllodes breast tumour","type":"exact"},{"name":"phyllodes neoplasm of breast","type":"exact"},{"name":"phyllodes neoplasm of the breast","type":"exact"},{"name":"phyllodes tumor of breast","type":"exact"},{"name":"phyllodes tumor of the breast","type":"exact"},{"name":"phyllodes tumour of breast","type":"exact"},{"name":"phyllodes tumour of the breast","type":"exact"}],"termid":"MONDO:0021047","xrefs":{"Monarch":{"xref_id":"0021047"}}}


id: PBO:0048911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member F","termid":"PBO:0048911"}


id: PBO:0004671
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem fusion protein in S. cerevisiae, SPBC21C3.07c is related to the C-terminal region of YOR239W","termid":"PBO:0004671"}


id: PATO:0001906
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's participation in movement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"movement quality","termid":"PATO:0001906"}


id: PBO:0108907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1191 pseudogene 1","termid":"PBO:0108907"}


id: PBO:0089666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent chromatin remodeller/ubiquitin-protein ligase E3 Rad8","termid":"PBO:0089666"}


id: GO:0042640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair.","definition_xrefs":["PMID:12230507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cycle phase","termid":"GO:0044851"},{"relation_name":"part_of","term_name":"hair follicle maturation","termid":"GO:0048820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anagen","synonyms":[{"name":"hair growth","type":"related"}],"termid":"GO:0042640"}


id: MONDO:0006267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma with cavernous vascular spaces arising from the liver. It is the most frequent benign tumor of the liver and usually affects young females.","definition_xrefs":["NCIT:C96839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver hemangioma","termid":"MONDO:0002404"},{"relation_name":"is_a","term_name":"cavernous hemangioma","termid":"MONDO:0003155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0005570"],"is_obsolete":false,"name":"liver cavernous hemangioma","secondary_identifiers":["MEDGEN:482990","UMLS:C3282904"],"synonyms":[{"name":"cavernous hemangioma of liver","type":"exact"},{"name":"liver cavernous hemangioma","type":"exact"}],"termid":"MONDO:0006267","xrefs":{"Monarch":{"xref_id":"0006267"}}}


id: MONDO:0016223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile hemangioma of rare localization","secondary_identifiers":["MEDGEN:825458","GARD:20453","SCTID:703270004","Orphanet:210589","UMLS:C3839613"],"termid":"MONDO:0016223","xrefs":{"Monarch":{"xref_id":"0016223"}}}


id: PBO:0082134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin filament binding protein that enhances actin ring formation; IQGAP family member required for assembly and contraction of the AMR, prior to cytokinesis; localizes to the contractile ring during anaphase in an Mlc1p-dependent manner, recruiting Myo1p and Hof1p to the site, and promoting cytokinetic core complex assembly; specifies bud-site selection, localizing axial markers Bud4p and Cdc12p; regulated by Cdc28p; relocalizes from the bud neck to the cytoplasm upon replication stress","termid":"PBO:0082134"}


id: PBO:0090973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tat binding protein 1(TBP-1)-interacting protein (TBPIP) homolog","termid":"PBO:0090973"}


id: PBO:0047499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flap structure-specific endonuclease 1","termid":"PBO:0047499"}


id: PBO:0046304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENAH actin regulator","termid":"PBO:0046304"}


id: FYPO:0005907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to nucleus during cellular response to heat","synonyms":[{"name":"normal protein localisation to nucleus during cellular response to heat","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0005907"}


id: FYPO:0000582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of spore germination is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spore germination","termid":"FYPO:0000305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of spore germination","synonyms":[{"name":"reduced rate of spore germination","type":"exact"},{"name":"spore germination: decreased rate","type":"related"}],"termid":"FYPO:0000582"}


id: PBO:0041500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 71B, pseudogene","termid":"PBO:0041500"}


id: PBO:0039449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and LEM domain containing 2","termid":"PBO:0039449"}


id: PBO:0018227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein involved in beta-tubulin folding Alp41","termid":"PBO:0018227"}


id: GO:0009798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of a pattern along a line or around a point.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axis specification","synonyms":[{"name":"axis determination","type":"related"}],"termid":"GO:0009798"}


id: GO:0005792
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete microsome (obsolete GO:0005792)","secondary_identifiers":["Wikipedia:Microsome"],"synonyms":[{"name":"microsomal membrane","type":"related"},{"name":"microsome","type":"exact"}],"termid":"GO:0005792"}


id: MONDO:0004750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of disorders characterized by an impairment in the development of an individual's language capabilities, which is in contrast to his/her non-verbal intellect.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"communication disorder","termid":"MONDO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"language disorder","secondary_identifiers":["MEDGEN:44069","MESH:D007806","HP:0002463","DOID:93","NCIT:C97155","UMLS:C0023015"],"termid":"MONDO:0004750","xrefs":{"Monarch":{"xref_id":"0004750"}}}


id: PBO:0090356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase beta subunit Lsc2","termid":"PBO:0090356"}


id: PBO:0043504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 3B","termid":"PBO:0043504"}


id: PATO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000184 arousal (obsolete PATO:0000184)","termid":"PATO:0000184"}


id: GO:0007106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cytokinesis, protein recruitment (obsolete GO:0007106)","synonyms":[{"name":"cytokinesis, protein recruitment","type":"exact"}],"termid":"GO:0007106"}


id: MONDO:0020617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--ok (obsolete MONDO:0020617)","secondary_identifiers":["OMIM:111380"],"synonyms":[{"name":"BLOOD GROUP--OK","type":"related"},{"name":"OK","type":"related"},{"name":"blood group, OK","type":"exact"}],"termid":"MONDO:0020617","xrefs":{"Monarch":{"xref_id":"0020617"}}}


id: PBO:0036336
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by mouse DLP1","termid":"PBO:0036336"}


id: GO:1903431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell maturation.","definition_xrefs":["PMID:17459944","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of cell maturation","termid":"GO:1903429"},{"relation_name":"positively_regulates","term_name":"cell maturation","termid":"GO:0048469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell maturation","synonyms":[{"name":"activation of cell maturation","type":"narrow"},{"name":"activation of functional differentiation","type":"related"},{"name":"positive regulation of functional differentiation","type":"related"},{"name":"up regulation of cell maturation","type":"exact"},{"name":"up regulation of functional differentiation","type":"related"},{"name":"up-regulation of cell maturation","type":"exact"},{"name":"up-regulation of functional differentiation","type":"related"},{"name":"upregulation of cell maturation","type":"exact"},{"name":"upregulation of functional differentiation","type":"related"}],"termid":"GO:1903431"}


id: GO:1904313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methamphetamine hydrochloride stimulus.","definition_xrefs":["PMID:22174933","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methamphetamine hydrochloride","synonyms":[{"name":"response to methamphetamine HCL","type":"exact"}],"termid":"GO:1904313"}


id: GO:0106303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannogen, a mannose-containing polysaccharide that is a major energy reserve in Leishmania.","definition_xrefs":["PMID:16766650","PMID:31513773","PMID:12902334","PMID:31662278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"mannogen metabolic process","synonyms":[{"name":"beta-1,2-mannan metabolic process","type":"related"},{"name":"mannogen metabolism","type":"related"}],"termid":"GO:0106303"}


id: FYPO:0003244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mRNA splicing via the spliceosome takes place normally for some, but is decreased for other, specific introns.","definition_xrefs":["PMID:23754748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome","termid":"FYPO:0003029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000294","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased mRNA splicing, via spliceosome, intron-specific","synonyms":[{"name":"differential pre-mRNA splicing defects","type":"exact"},{"name":"intron-specific abnormal mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"intron-specific abnormal mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"intron-specific abnormal nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"intron-specific mRNA splicing defects","type":"exact"}],"termid":"FYPO:0003244"}


id: GO:0031036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament assembly","termid":"GO:0031034"},{"relation_name":"is_a","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0030036","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"myosin II filament assembly","synonyms":[{"name":"myosin II polymerization","type":"related"}],"termid":"GO:0031036"}


id: MONDO:0044351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Schistosoma intercalatum.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schistosomiasis","termid":"MONDO:0015254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schistosoma intercalatum infectious disease","secondary_identifiers":["ICD9:120.8","MEDGEN:124448","NCIT:C35364","SCTID:52179003","UMLS:C0276932"],"synonyms":[{"name":"Schistosoma intercalatum caused disease or disorder","type":"exact"},{"name":"Schistosoma intercalatum disease or disorder","type":"exact"},{"name":"infection by Schistosoma intercalatum","type":"exact"},{"name":"infection caused by Schistosoma intercalatum","type":"related"}],"termid":"MONDO:0044351","xrefs":{"Monarch":{"xref_id":"0044351"}}}


id: PBO:0056239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mago homolog, exon junction complex subunit","termid":"PBO:0056239"}


id: GO:1903511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving orotic acid.","definition_xrefs":["PMID:10727948","GO_REF:0000068","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"orotic acid metabolic process","synonyms":[{"name":"orotic acid metabolism","type":"exact"}],"termid":"GO:1903511"}


id: GO:0007484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the genitalia over time, from formation as part of the genital disc to the mature structure. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:sensu","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia development","termid":"GO:0048806"},{"relation_name":"part_of","term_name":"genital disc development","termid":"GO:0035215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived genitalia development","synonyms":[{"name":"genital development","type":"broad"}],"termid":"GO:0007484"}


id: MONDO:0008659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"transcobalamin I deficiency","secondary_identifiers":["OMIM:193090","Orphanet:2967","SCTID:237933007","UMLS:C0342700","GARD:4522","MEDGEN:90993","MESH:C562798"],"synonyms":[{"name":"Haptocorrin deficiency","type":"exact"},{"name":"R Binder deficiency with lactoferrin deficiency","type":"related"},{"name":"TCI deficiency","type":"exact"},{"name":"Tcn1 deficiency","type":"related"},{"name":"cobalamin Pseudodeficiency due to transcobalamin deficiency","type":"related"},{"name":"cobalamin R Binder Protein deficiency","type":"related"},{"name":"transcobalamin 1 deficiency","type":"related"},{"name":"transcobalamin 1 deficiency with lactoferrin deficiency","type":"related"},{"name":"transcobalamin I deficiency","type":"exact"},{"name":"transcobalamin-1 deficiency","type":"exact"}],"termid":"MONDO:0008659","xrefs":{"Monarch":{"xref_id":"0008659"}}}


id: GO:0004616
data:
  {"annotated_genes":["SJAG_03852"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80743],"is_not":false,"summary":null,"term":"GO:0004616"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-D-gluconate + NADP+ = D-ribulose 5-phosphate + CO2 + NADPH + H+.","definition_xrefs":["EC:1.1.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"phosphogluconate dehydrogenase (decarboxylating) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:10116","Reactome:R-HSA-71299","MetaCyc:RXN-9952"],"synonyms":[{"name":"6-phospho-D-gluconate dehydrogenase activity","type":"related"},{"name":"6-phospho-D-gluconate:NADP+ 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"6-phosphogluconate dehydrogenase (decarboxylating)","type":"related"},{"name":"6-phosphogluconic carboxylase activity","type":"related"},{"name":"6-phosphogluconic dehydrogenase activity","type":"broad"},{"name":"6PGD activity","type":"related"},{"name":"phosphogluconic acid dehydrogenase activity","type":"related"}],"termid":"GO:0004616","terms_by_termid":{"GO:0004616":null}}


id: GO:0097057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex comprising tumor necrosis factor (TNF) receptor-associated factor 2 (TRAF2) and glutathione S-transferase pi 1 (GSTP1). This complex is thought to disrupt the TNF signaling cascade, thus down-regulating inflammatory responses.","definition_xrefs":["PMID:16636664","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TRAF2-GSTP1 complex","termid":"GO:0097057"}


id: PBO:0058395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4767","termid":"PBO:0058395"}


id: PBO:0071962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS6KA2 antisense RNA 1","termid":"PBO:0071962"}


id: PBO:0072536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 66","termid":"PBO:0072536"}


id: FYPO:0000482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic recombination","termid":"FYPO:0000481"},{"relation_name":"is_a","term_name":"decreased DNA recombination during vegetative growth","termid":"FYPO:0002340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitotic recombination","synonyms":[{"name":"decreased mitotic recombination during mitotic cell cycle","type":"related"},{"name":"decreased mitotic recombination during vegetative growth","type":"exact"},{"name":"mitotic recombination: decreased","type":"related"},{"name":"reduced mitotic recombination","type":"exact"}],"termid":"FYPO:0000482"}


id: PBO:0047148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM181A antisense RNA 1","termid":"PBO:0047148"}


id: PBO:0005191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine deaminase (predicted)","termid":"PBO:0005191"}


id: PBO:0001399
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.16.1.18","termid":"PBO:0001399"}


id: MONDO:0020307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A childhood-onset self-limited focal epilepsy syndrome characterized by the onset in early childhood of focal autonomic seizures that are often prolonged. The EEG commonly shows high amplitude focal spikes typically activated by sleep. Seizures are infrequent in most patients. Seizures are self-limiting with remission typically within a few years from onset.","direct_ancestors":[{"relation_name":"is_a","term_name":"self-limited childhood occipital epilepsy","termid":"MONDO:0007558"},{"relation_name":"is_a","term_name":"childhood-onset self-limited focal epilepsy syndrome","termid":"MONDO:0800502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"self-limited epilepsy with autonomic seizures","secondary_identifiers":["MEDGEN:581520","SCTID:230387008","UMLS:C0393676","Orphanet:98815","ICD9:345.80","GARD:19581"],"synonyms":[{"name":"Panayiotopoulos syndrome","type":"exact"},{"name":"SeLEAS","type":"exact"},{"name":"benign childhood occipital epilepsy, Panayiotopoulos type","type":"exact"},{"name":"early onset benign occipital epilepsy","type":"exact"},{"name":"early-onset benign childhood occipital epilepsy","type":"exact"}],"termid":"MONDO:0020307","xrefs":{"Monarch":{"xref_id":"0020307"}}}


id: PBO:0081617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 546","termid":"PBO:0081617"}


id: PBO:0030386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cortex_morphology","termid":"PBO:0030386"}


id: PBO:0039161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 6","termid":"PBO:0039161"}


id: FYPO:0003291
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein does not contain galactose residues. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio, and the galactose residues are connected by alpha-1,2 linkages.","definition_xrefs":["PMID:9125114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0003290","FYPO:0005447"],"is_obsolete":false,"name":"galactose absent from glycoprotein glycan","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"alpha 1,2-linked galactose residues absent from glycoprotein","type":"exact"},{"name":"galactose absent from glycoprotein oligosaccharide","type":"related"}],"termid":"FYPO:0003291","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: PBO:0052346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 2C","termid":"PBO:0052346"}


id: PBO:0081761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF691 divergent transcript","termid":"PBO:0081761"}


id: GO:1900496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of butyryl-CoA biosynthetic process from acetyl-CoA.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid biosynthetic process","termid":"GO:0045723"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:1900494"},{"relation_name":"positively_regulates","term_name":"butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:0044579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0006629","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of butyryl-CoA biosynthetic process from acetyl-CoA","synonyms":[{"name":"activation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"activation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"narrow"},{"name":"positive regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"up-regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up-regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"upregulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"upregulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"}],"termid":"GO:1900496"}


id: GO:0060934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to His-Purkinje cell fates and their capacity to differentiate into His-Purkinje cells. These cells form the fibers that regulate cardiac muscle contraction in the ventricles.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"His-Purkinje system cell differentiation","termid":"GO:0060932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"His-Purkinje system cell fate commitment","termid":"GO:0060934"}


id: GO:0032332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chondrocyte differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chondrocyte differentiation","termid":"GO:0032330"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of cartilage development","termid":"GO:0061036"},{"relation_name":"positively_regulates","term_name":"chondrocyte differentiation","termid":"GO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chondrocyte differentiation","synonyms":[{"name":"activation of chondrocyte differentiation","type":"narrow"},{"name":"stimulation of chondrocyte differentiation","type":"narrow"},{"name":"up regulation of chondrocyte differentiation","type":"exact"},{"name":"up-regulation of chondrocyte differentiation","type":"exact"},{"name":"upregulation of chondrocyte differentiation","type":"exact"}],"termid":"GO:0032332"}


id: GO:0035861
data:
  {"annotated_genes":["SJAG_01644","SJAG_02098","SJAG_01573","SJAG_01698","SJAG_03906","SJAG_03026","SJAG_01648","SJAG_02072","SJAG_02616","SJAG_02460","SJAG_01605","SJAG_04183","SJAG_00757","SJAG_02828","SJAG_01533","SJAG_01832","SJAG_02990","SJAG_02575","SJAG_04190","SJAG_03780","SJAG_00640","SJAG_01205","SJAG_02708","SJAG_01680","SJAG_02079","SJAG_04142","SJAG_05295","SJAG_05239","SJAG_00250","SJAG_04791","SJAG_01708","SJAG_05372","SJAG_01419","SJAG_01849","SJAG_03680","SJAG_01429","SJAG_05012","SJAG_02771","SJAG_03855","SJAG_05196","SJAG_00399","SJAG_01076","SJAG_03615","SJAG_04816","SJAG_00727","SJAG_03722","SJAG_02294","SJAG_02545","SJAG_03454","SJAG_01486","SJAG_03898","SJAG_05232","SJAG_03923","SJAG_04239","SJAG_05373","SJAG_02200","SJAG_03941","SJAG_01410","SJAG_02521","SJAG_01677"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71486,72074,74639,75595,75615,77496,78326,79159,79765,88971,89501,89631,89932,90541,90625,91768,91875,93016,94004,94279,96339,96504,96843,97243,97447,97477,97747,99284,99375,99511,100901,100931,100963,101368,103130,103210,103268,103641,104369,104466,104534,104736,107965,108055,108099,109621,111130,111525,111813,111856,112032,112820,114587,116551,116813,117096,117502,117597,118019,119011],"is_not":false,"summary":null,"term":"GO:0035861"}]},"cv_name":"cellular_component","definition":"A region of a chromosome at which a DNA double-strand break has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix.","definition_xrefs":["PMID:21035408","GOC:vw","GOC:bf","GOC:mah","PMID:20096808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of DNA damage","termid":"GO:0090734"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00250":null,"SJAG_00399":null,"SJAG_00640":null,"SJAG_00727":null,"SJAG_00757":null,"SJAG_01076":null,"SJAG_01205":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01429":null,"SJAG_01486":null,"SJAG_01533":null,"SJAG_01573":null,"SJAG_01605":null,"SJAG_01644":null,"SJAG_01648":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01832":null,"SJAG_01849":null,"SJAG_02072":null,"SJAG_02079":null,"SJAG_02098":null,"SJAG_02200":null,"SJAG_02294":null,"SJAG_02460":null,"SJAG_02521":null,"SJAG_02545":null,"SJAG_02575":null,"SJAG_02616":null,"SJAG_02708":null,"SJAG_02771":null,"SJAG_02828":null,"SJAG_02990":null,"SJAG_03026":null,"SJAG_03454":null,"SJAG_03615":null,"SJAG_03680":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03906":null,"SJAG_03923":null,"SJAG_03941":null,"SJAG_04142":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04239":null,"SJAG_04791":null,"SJAG_04816":null,"SJAG_05012":null,"SJAG_05196":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_05295":null,"SJAG_05372":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"site of double-strand break","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA damage foci","type":"related"},{"name":"DNA damage focus","type":"related"},{"name":"IRIF","type":"related"},{"name":"ionizing radiation-induced foci","type":"related"},{"name":"site of DSB","type":"exact"}],"termid":"GO:0035861","terms_by_termid":{"GO:0035861":null}}


id: GO:0022848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Selectively enables the transmembrane transfer of a cation by a channel that opens upon binding acetylcholine.","definition_xrefs":["GOC:mah","PMID:2466967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005231"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"},{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential","termid":"GO:1904315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0038023","GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"acetylcholine-gated monoatomic cation-selective channel activity","secondary_identifiers":["GO:0004889","GO:0016904"],"synonyms":[{"name":"acetylcholine-activated cation-selective channel activity","type":"exact"},{"name":"acetylcholine-gated cation channel activity","type":"exact"},{"name":"acetylcholine-gated cation-selective channel activity","type":"broad"},{"name":"ionotropic acetylcholine receptor activity","type":"exact"},{"name":"nAChR","type":"exact"},{"name":"nicotinergic acetylcholine receptor activity","type":"exact"},{"name":"nicotinic acetylcholine-activated cation-selective channel activity","type":"exact"}],"termid":"GO:0022848"}


id: MONDO:0006017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete western equine encephalitis (obsolete MONDO:0006017)","termid":"MONDO:0006017","xrefs":{"Monarch":{"xref_id":"0006017"}}}


id: PBO:0030084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_tip","termid":"PBO:0030084"}


id: PBO:0034693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K16_acetylation_at_telomere","termid":"PBO:0034693"}


id: PBO:0040000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 13A","termid":"PBO:0040000"}


id: GO:0005156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor receptor inhibiting ligand activity (obsolete GO:0005156)","synonyms":[{"name":"EGF receptor inhibiting ligand activity","type":"exact"},{"name":"EGFR inhibiting ligand activity","type":"exact"},{"name":"epidermal growth factor receptor inhibiting ligand activity","type":"exact"}],"termid":"GO:0005156"}


id: MONDO:0007060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the SPATA16 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"},{"relation_name":"is_a","term_name":"male infertility due to globozoospermia","termid":"MONDO:0015746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 6","secondary_identifiers":["DOID:0070167","MEDGEN:96048","UMLS:C0403825","GARD:15032","OMIM:102530","SCTID:236818008"],"synonyms":[{"name":"SPATA16 azoospermia","type":"exact"},{"name":"SPGF6","type":"related"},{"name":"acrosome malformation of spermatozoa","type":"related"},{"name":"azoospermia caused by mutation in SPATA16","type":"exact"},{"name":"globozoospermia","type":"related"},{"name":"round-headed spermatozoa","type":"related"},{"name":"spermatogenic failure 6","type":"exact"},{"name":"spermatogenic failure type 6","type":"exact"},{"name":"spermatozoa, round-headed","type":"related"}],"termid":"MONDO:0007060","xrefs":{"Monarch":{"xref_id":"0007060"}}}


id: PBO:0039205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 8","termid":"PBO:0039205"}


id: PBO:0034769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, ATP:ADP antiporter, calcium binding subfamily (predicted)","termid":"PBO:0034769"}


id: PBO:0065726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader-Willi region non-protein coding RNA 3","termid":"PBO:0065726"}


id: MONDO:0035009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thrombotic disease","termid":"MONDO:0000831"},{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"isolated mesenteric vein thrombosis","secondary_identifiers":["Orphanet:583861","GARD:22339","icd11.foundation:213868120"],"termid":"MONDO:0035009","xrefs":{"Monarch":{"xref_id":"0035009"}}}


id: PR:Q9P7Q1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.02c gene.","definition_xrefs":["UniProtKB:Q9P7Q1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacid dehydrogenase homolog 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.02c","synonyms":[{"name":"Spom972h-SPAC186.02c","type":"exact"}],"termid":"PR:Q9P7Q1"}


id: PBO:0016542
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human U2AF1","termid":"PBO:0016542"}


id: PBO:0059601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 13","termid":"PBO:0059601"}


id: PBO:0067262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 336, pseudogene","termid":"PBO:0067262"}


id: PBO:0088179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-binding mitochondrial intermembrane space (IMS) protein; involved in a disulfide relay system for IMS import of cysteine-containing proteins; binds Mia40p and stimulates its Erv1p-dependent oxidation, probably by sequestering zinc","termid":"PBO:0088179"}


id: MONDO:0011350
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85905,85906],"is_not":false,"summary":null,"term":"MONDO:0011350"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the MYH9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1863659","GARD:9726","OMIM:603622","MEDGEN:350942","DOID:0110548"],"synonyms":[{"name":"DFNA17","type":"narrow"},{"name":"MYH9 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 17","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 17","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in MYH9","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 17","type":"narrow"},{"name":"cochleosaccular degeneration","type":"related"},{"name":"deafness, autosomal dominant 17","type":"narrow"},{"name":"deafness, autosomal dominant nonsyndromic sensorineural 17","type":"narrow"},{"name":"deafness, autosomal dominant type 17","type":"narrow"},{"name":"late-onset progressive hereditary hearing impairment due to cochleosaccular degeneration","type":"related"},{"name":"nonsyndromic hereditary deafness DFNA17","type":"narrow"}],"termid":"MONDO:0011350","terms_by_termid":{"MONDO:0011350":null},"xrefs":{"Monarch":{"xref_id":"0011350"}}}


id: GO:0061230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesonephric juxtaglomerulus cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerulus cell fate commitment","termid":"GO:0072150"},{"relation_name":"part_of","term_name":"mesonephric juxtaglomerulus cell differentiation","termid":"GO:0061207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric juxtaglomerulus cell fate commitment","termid":"GO:0061230"}


id: MONDO:0010053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spherocytosis in which the cause of the disease is a mutation in the SPTA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spherocytosis","termid":"MONDO:0019350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hereditary spherocytosis type 3","secondary_identifiers":["DOID:0110918","MEDGEN:394798","UMLS:C2678338","GARD:15236","OMIM:270970","MESH:C567489"],"synonyms":[{"name":"HS3","type":"exact"},{"name":"SPH3","type":"exact"},{"name":"SPTA1 hereditary spherocytosis","type":"exact"},{"name":"hereditary spherocytosis 3","type":"exact"},{"name":"hereditary spherocytosis caused by mutation in SPTA1","type":"exact"},{"name":"spherocytosis, hereditary, 3","type":"related"},{"name":"spherocytosis, type 3","type":"related"}],"termid":"MONDO:0010053","xrefs":{"Monarch":{"xref_id":"0010053"}}}


id: PBO:0065367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSD2 antisense RNA 1","termid":"PBO:0065367"}


id: GO:0042414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving epinephrine, a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.","definition_xrefs":["ISBN:0198506732","GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epinephrine metabolic process","synonyms":[{"name":"adrenaline metabolic process","type":"exact"},{"name":"adrenaline metabolism","type":"exact"},{"name":"epinephrine metabolism","type":"exact"}],"termid":"GO:0042414"}


id: PBO:0001436
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human MAPRE1","termid":"PBO:0001436"}


id: PBO:0050663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 1 like","termid":"PBO:0050663"}


id: MONDO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete methylmalonic aciduria and homocystinuria (obsolete MONDO:0000059)","termid":"MONDO:0000059","xrefs":{"Monarch":{"xref_id":"0000059"}}}


id: SO:0000931
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a guide_RNA that base-pairs to a target mRNA.","definition_xrefs":["SO:jk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guide_RNA_region","termid":"SO:0000930"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anchor_region","synonyms":[{"name":"anchor region","type":"exact"}],"termid":"SO:0000931"}


id: PBO:0081665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 587","termid":"PBO:0081665"}


id: PBO:0027144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_G2_DNA_damage_checkpoint","termid":"PBO:0027144"}


id: PBO:0028307
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_cellular_response_to_methylglyoxal","termid":"PBO:0028307"}


id: GO:0090152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the mitochondrial membrane that contributes to mitochondrial fission.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007005","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to mitochondrial membrane involved in mitochondrial fission","synonyms":[{"name":"establishment of protein localisation in mitochondrial membrane involved in mitochondrial fission","type":"exact"},{"name":"establishment of protein localization in mitochondrial membrane involved in mitochondrial fission","type":"exact"}],"termid":"GO:0090152"}


id: MOD:00515
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex HexNAc(2)","definition_xrefs":["PubMed:111247","PubMed:5490222","Unimod:147","PubMed:1694179","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"HexNAc2dHex1 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(2)dHex(1)","type":"related"},{"name":"HexNAc2dHex1","type":"related"}],"termid":"MOD:00515"}


id: MONDO:0005869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myiasis (obsolete MONDO:0005869)","termid":"MONDO:0005869","xrefs":{"Monarch":{"xref_id":"0005869"}}}


id: GO:0002508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction in the central lymphoid organs: the thymus and bone marrow.","definition_xrefs":["GOC:jal","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central tolerance induction","termid":"GO:0002508"}


id: PBO:0031627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sporulation_frequency","termid":"PBO:0031627"}


id: GO:0004850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine + phosphate = uracil + alpha-D-ribose 1-phosphate.","definition_xrefs":["EC:2.4.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-nucleoside phosphorylase activity","termid":"GO:0016154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"uridine phosphorylase activity","secondary_identifiers":["MetaCyc:URPHOS-RXN","RHEA:24388","Reactome:R-HSA-74372","Reactome:R-HSA-74376"],"synonyms":[{"name":"UPH","type":"related"},{"name":"UPase activity","type":"related"},{"name":"UrdPase activity","type":"related"},{"name":"pyrimidine phosphorylase activity","type":"broad"},{"name":"uridine:phosphate alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0004850"}


id: PBO:0059762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 36","termid":"PBO:0059762"}


id: PBO:0071661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 2","termid":"PBO:0071661"}


id: GO:2001302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipoxin A4. Lipoxin A4 is a C20 hydroxy fatty acid having (5S)-, (6R)- and (15S)-hydroxy groups as well as (7E)- (9E)-, (11Z)- and (13E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"lipoxin metabolic process","termid":"GO:2001300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lipoxin A4 metabolic process","synonyms":[{"name":"LXA4 metabolic process","type":"exact"},{"name":"LXA4 metabolism","type":"exact"},{"name":"lipoxin A4 metabolism","type":"exact"}],"termid":"GO:2001302"}


id: GO:1903118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of urate within an organism or cell.","definition_xrefs":["GOC:TermGenie","PMID:22306318","GO_REF:0000072","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete urate homeostasis (obsolete GO:1903118)","termid":"GO:1903118"}


id: GO:0031937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chromatin silencing.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chromatin silencing (obsolete GO:0031937)","synonyms":[{"name":"activation of chromatin silencing","type":"narrow"},{"name":"positive regulation of heterochromatic silencing","type":"exact"},{"name":"stimulation of chromatin silencing","type":"narrow"},{"name":"up regulation of chromatin silencing","type":"exact"},{"name":"up-regulation of chromatin silencing","type":"exact"},{"name":"upregulation of chromatin silencing","type":"exact"}],"termid":"GO:0031937"}


id: PBO:0067073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 104, pseudogene","termid":"PBO:0067073"}


id: GO:0141064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that contributes to the onset of de novo transcription from the zygotic genome as part of the maternal-to-zygote transition in gene expression. The zygote overcomes the silencing that has been established. The cause of this silencing could be due to several factors: chromatin modifications leading to repression, or lack of adequate transcription machinery.","definition_xrefs":["PMID:19204068","PMID:20808952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"part_of","term_name":"maternal-to-zygotic transition of gene expression","termid":"GO:0160021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"zygotic genome activation","synonyms":[{"name":"ZGA","type":"broad"}],"termid":"GO:0141064"}


id: MONDO:0004023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hepatoblastoma (obsolete MONDO:0004023)","termid":"MONDO:0004023","xrefs":{"Monarch":{"xref_id":"0004023"}}}


id: PBO:0078867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 2","termid":"PBO:0078867"}


id: MONDO:0007190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, chronic lymphocytic, susceptibility to, 2","secondary_identifiers":["UMLS:C1868683","MEDGEN:358385","OMIM:109543"],"synonyms":[{"name":"B-cell malignancy, low-grade","type":"related"},{"name":"Clls2","type":"related"},{"name":"disrupted in B-cell malignancy","type":"related"},{"name":"leukemia, chronic lymphocytic, B-cell","type":"related"},{"name":"leukemia, chronic lymphocytic, susceptibility to, 2","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0007190","xrefs":{"Monarch":{"xref_id":"0007190"}}}


id: PBO:0080142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasodilator stimulated phosphoprotein","termid":"PBO:0080142"}


id: MONDO:0015702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency","termid":"MONDO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-B+ severe combined immunodeficiency due to CD45 deficiency","secondary_identifiers":["GARD:17052","UMLS:C5679579","MEDGEN:1842877","DOID:0060014","Orphanet:169157"],"synonyms":[{"name":"CD45 deficiency","type":"exact"},{"name":"T-B+ SCID due to CD45 deficiency","type":"exact"}],"termid":"MONDO:0015702","xrefs":{"Monarch":{"xref_id":"0015702"}}}


id: PBO:0087584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); necessary for maintaining sister chromatid cohesion in prophase I of meiosis by inhibiting premature ubiquitination and subsequent degradation of substrates by the APC(Ama1) ubiquitin ligase","termid":"PBO:0087584"}


id: GO:0032809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The plasma membrane of a neuron cell body - excludes the plasma membrane of cell projections such as axons and dendrites.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell body membrane","termid":"GO:0044298"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"neuronal cell body membrane","synonyms":[{"name":"neuron cell body membrane","type":"exact"},{"name":"neuronal cell soma membrane","type":"exact"}],"termid":"GO:0032809"}


id: GO:0099093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a calcium ion (Ca2+) is transported out of the mitochondrial matrix, and into the cytosol.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial calcium ion transmembrane transport","termid":"GO:0006851"},{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"},{"relation_name":"is_a","term_name":"export from the mitochondrion","termid":"GO:0170037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"calcium export from the mitochondrion","synonyms":[{"name":"calcium ion transmembrane export from mitochondrion","type":"exact"},{"name":"mitochondrial calcium ion export","type":"broad"},{"name":"mitochondrial calcium release","type":"exact"}],"termid":"GO:0099093"}


id: GO:1902498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein autoubiquitination.","definition_xrefs":["GOC:rb","PMID:24069405","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ubiquitination","termid":"GO:0031396"},{"relation_name":"regulates","term_name":"protein autoubiquitination","termid":"GO:0051865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein autoubiquitination","synonyms":[{"name":"regulation of protein auto-ubiquitination","type":"exact"},{"name":"regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"regulation of protein autoubiquitinylation","type":"exact"},{"name":"regulation of protein self-ubiquitination","type":"exact"},{"name":"regulation of protein self-ubiquitinylation","type":"exact"}],"termid":"GO:1902498"}


id: GO:0102866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (8Z,11Z,14Z)-icosatrienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (5Z,8Z,11Z,14Z)-eicosatetraenoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O. Also converts an (8Z,11Z,14Z,17Z)-eicosatetraenoyl-containing glycerolipid into a (5Z,8Z,11Z,14Z,17Z)-eicosapentaenoyl-containing glycerolipid.","definition_xrefs":["EC:1.14.19.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"acyl-lipid (8-3)-desaturase activity","synonyms":[{"name":"Delta(5)-fatty-acid desaturase activity","type":"exact"},{"name":"acyl-lipid 5-desaturase activity","type":"related"},{"name":"di-homo-gamma-linolenate delta5 desaturase activity","type":"related"}],"termid":"GO:0102866"}


id: GO:0052727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-antheraxanthin = all-trans-capsanthin.","definition_xrefs":["RHEA:17373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"capsanthin synthase activity","secondary_identifiers":["MetaCyc:RXN-7947"],"synonyms":[{"name":"CCS","type":"broad"},{"name":"capsanthin-capsorubin synthase activity","type":"broad"},{"name":"ketoxanthophyll synthase activity","type":"broad"}],"termid":"GO:0052727"}


id: MOD:01671
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(L-isoaspartyl)-L-threonine, using free L-asparagine and releasing ammonia.","definition_xrefs":["PubMed:8706862","RESID:AA0525#THR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"O-(L-isoaspartyl)-L-threonine","termid":"MOD:01978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoaspartyl)-L-threonine (active site intermediate)","synonyms":[{"name":"(2S)-2-amino-4-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-4-oxobutanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-3-amino-3-carboxypropanoyl]oxy)propanoic acid","type":"exact"},{"name":"ACT_SITE O-isoaspartyl threonine intermediate","type":"exact"},{"name":"O(beta)-(beta-aspartyl)threonine","type":"exact"},{"name":"O-(L-isoaspartyl)-L-threonine","type":"exact"},{"name":"O3-(isoaspartyl)-threonine","type":"exact"}],"termid":"MOD:01671"}


id: MONDO:0015613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dentin dysplasia (DD) is a rare disorder belonging to the group of hereditary dentin defects and is characterized by abnormal dentin structure and root development resulting in abnormal tooth development. It encompasses two subtypes: DD type I and DD type II.","definition_xrefs":["Orphanet:1653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth hard tissue disease","termid":"MONDO:0002220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin dysplasia","secondary_identifiers":["icd11.foundation:1262020657","ICD9:520.5","SCTID:109492001","GARD:16575","MESH:D003805","UMLS:C0011430","DOID:701","MEDGEN:8310"],"synonyms":[{"name":"DD","type":"exact"},{"name":"dentinal dysplasia","type":"exact"}],"termid":"MONDO:0015613","xrefs":{"Monarch":{"xref_id":"0015613"}}}


id: PR:Q1MTP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iss9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1MTP1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THP3 homolog C2A9.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.11c","synonyms":[{"name":"Spom972h-iss9","type":"exact"}],"termid":"PR:Q1MTP1"}


id: FYPO:0001833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoglycerate mutase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal phosphoglycerate mutase activity","termid":"FYPO:0001831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased phosphoglycerate mutase activity","termid":"FYPO:0001833"}


id: GO:0097082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a vascular smooth muscle cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell fate specification","termid":"GO:0042694"},{"relation_name":"part_of","term_name":"vascular associated smooth muscle cell fate commitment","termid":"GO:0097081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell fate specification","synonyms":[{"name":"vascular smooth muscle cell fate specification","type":"exact"}],"termid":"GO:0097082"}


id: FYPO:0005160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle progression is normal (i.e. indistinguishable from wild type) after exposure to hydroxyurea.","definition_xrefs":["PomBase:mah","PMID:16849602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cycle progression following cellular response to hydroxyurea","synonyms":[{"name":"normal cell cycle progression following HU exposure","type":"exact"},{"name":"normal cell cycle progression following cellular response to HU","type":"exact"}],"termid":"FYPO:0005160"}


id: PBO:0018153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex subunit Nts1","termid":"PBO:0018153"}


id: PBO:0068380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 181","termid":"PBO:0068380"}


id: PBO:0059711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 19","termid":"PBO:0059711"}


id: MONDO:0022772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vascular sarcoma that commonly occurs in the lower extremities. It occurs predominantly in elderly male patients of southern European ancestry. It is characterized by the presence of purple, red-blue, or dark brown macular lesions, plaques and nodules. This disease is usually slow growing, although it can spread to the lungs and the gastrointestinal tract. If necessary, cutaneous lesions can be treated with radiation.","definition_xrefs":["NCIT:C9112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kaposi's sarcoma","termid":"MONDO:0005055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"classic Kaposi sarcoma","secondary_identifiers":["icd11.foundation:1595913346","MEDGEN:78931","UMLS:C0279084"],"synonyms":[{"name":"Kaposi sarcoma classical type","type":"exact"},{"name":"Kaposi sarcoma, classic","type":"exact"},{"name":"Kaposi's sarcoma, classical type","type":"exact"},{"name":"classic Kaposi sarcoma","type":"exact"},{"name":"classic Kaposi's sarcoma","type":"exact"}],"termid":"MONDO:0022772","xrefs":{"Monarch":{"xref_id":"0022772"}}}


id: PBO:0017462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_part_that_occurs_in","termid":"PBO:0017462"}


id: FYPO:0001881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form actin filaments that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0004803"],"is_obsolete":false,"name":"elongated actin filaments","synonyms":[{"name":"elongated actin filaments during mitotic cell cycle","type":"exact"},{"name":"elongated actin filaments during vegetative growth","type":"exact"},{"name":"elongated microfilaments","type":"related"},{"name":"increased actin filament length during vegetative growth","type":"exact"},{"name":"long actin filaments during vegetative growth","type":"exact"}],"termid":"FYPO:0001881"}


id: PATO:0001457
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process inhering in bearer by virtue of the bearer's disposition to respond to stimulation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality of a process","termid":"PATO:0002062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitivity of a process","synonyms":[{"name":"sensitivity of occurrent","type":"exact"}],"termid":"PATO:0001457"}


id: GO:0044386
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. Occurring in a host cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete integral to host endoplasmic reticulum membrane (obsolete GO:0044386)","termid":"GO:0044386"}


id: GO:1904130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of convergent extension involved in neural plate elongation.","definition_xrefs":["GOC:TermGenie","GOC:dph","GO_REF:0000058","PMID:24892953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"regulates","term_name":"convergent extension involved in neural plate elongation","termid":"GO:0022007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of convergent extension involved in neural plate elongation","termid":"GO:1904130"}


id: PBO:0027367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch","termid":"PBO:0027367"}


id: MONDO:0013755
data:
  {"annotated_genes":["SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86978],"is_not":false,"summary":null,"term":"MONDO:0013755"}]},"cv_name":"mondo","definition":"Any de Barsy syndrome in which the cause of the disease is a mutation in the PYCR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"de Barsy syndrome","termid":"MONDO:0017569"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0019303","MONDO:0006025"],"is_obsolete":false,"name":"PYCR1-related de Barsy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3280799","GARD:17340","MEDGEN:482429","OMIM:614438","Orphanet:293633","DOID:0070138"],"synonyms":[{"name":"ARCL3B","type":"exact"},{"name":"De Barsy syndrome B","type":"exact"},{"name":"PYCR1 de Barsy syndrome","type":"exact"},{"name":"PYCR1 deficiency","type":"exact"},{"name":"autosomal recessive cutis laxa type IIIB","type":"related"},{"name":"cutis laxa, autosomal recessive, type 3B","type":"related"},{"name":"cutis laxa, autosomal recessive, type IIIB","type":"related"},{"name":"de Barsy syndrome caused by mutation in PYCR1","type":"exact"},{"name":"pyrroline-5-carboxylate reductase 1 deficiency","type":"exact"}],"termid":"MONDO:0013755","terms_by_termid":{"MONDO:0013755":null},"xrefs":{"Monarch":{"xref_id":"0013755"}}}


id: PBO:0080260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 23 pseudogene","termid":"PBO:0080260"}


id: MONDO:0021210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the trachea.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal disorder","termid":"MONDO:0002567"},{"relation_name":"is_a","term_name":"respiratory tract neoplasm","termid":"MONDO:0020641"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trachea neoplasm","secondary_identifiers":["EFO:1001437","HP:0100551","GTR:AN0505660","UMLS:C0040582","GTR:AN0481062","NCIT:C3419","MESH:D014134","MEDGEN:21602"],"synonyms":[{"name":"neoplasm of the trachea","type":"exact"},{"name":"neoplasm of trachea","type":"exact"},{"name":"trachea neoplasm (disease)","type":"exact"},{"name":"trachea tumor","type":"exact"},{"name":"trachea tumour","type":"exact"},{"name":"tracheal neoplasm","type":"exact"},{"name":"tracheal tumor","type":"exact"},{"name":"tracheal tumour","type":"exact"},{"name":"tumor of the trachea","type":"exact"},{"name":"tumor of trachea","type":"exact"},{"name":"tumour of the trachea","type":"exact"},{"name":"tumour of trachea","type":"exact"}],"termid":"MONDO:0021210","xrefs":{"Monarch":{"xref_id":"0021210"}}}


id: PBO:0087615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; required for establishment and maintenance of chromosome condensation, chromosome segregation and chromatin binding by the complex; required for tRNA genes clustering at the nucleolus; required for replication slow zone breakage following Mec1p inactivation; transcription is cell cycle regulated, peaking in mitosis and declining in G1; protein is constitutively degraded by the proteasome; rate limiting for condensin recruitment to chromatin","termid":"PBO:0087615"}


id: GO:0052790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: chitooligosaccharide with N-acetylglucosamine at nonreducing terminal + H2O = chitooligosaccharide with glucosamine at nonreducing terminal + acetate. This reaction is the deacetylation of a chitooligosaccharide at the nonreducing N-acetylglucosamine residue; chitooligosaccharide are composed of (1->4)-linked D-glucosamine (GlcN) and N-acetyl-D-glucosamine (GlcNAc) in varying proportions.","definition_xrefs":["PMID:8986807","PMID:8421697","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chitooligosaccharide deacetylase activity (obsolete GO:0052790)","termid":"GO:0052790"}


id: PBO:0071670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 2","termid":"PBO:0071670"}


id: PBO:0059278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L37","termid":"PBO:0059278"}


id: PBO:0049390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 3, mitochondrial","termid":"PBO:0049390"}


id: GO:0000148
data:
  {"annotated_genes":["SJAG_01453","SJAG_03587","SJAG_02222","SJAG_01288","SJAG_05285"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60186,62896,64418,69669,102949],"is_not":false,"summary":null,"term":"GO:0000148"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the transfer of a glucose group from UDP-glucose to a (1->3)-beta-D-glucan chain.","definition_xrefs":["PMID:7983071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01288":null,"SJAG_01453":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"1,3-beta-D-glucan synthase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"(1->3)-beta-glucan synthase complex","type":"exact"},{"name":"1,3-beta-glucan synthase complex","type":"exact"}],"termid":"GO:0000148","terms_by_termid":{"GO:0000148":null}}


id: GO:0034925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyrene + O2 + 2 H+ + 2 e- = pyrene-4,5-oxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrene 4,5-monooxygenase activity (obsolete GO:0034925)","termid":"GO:0034925"}


id: PR:Q9Y7K2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase mTOR that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02637","PANTHER:PTHR11139:SF9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase tor2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.07c","secondary_identifiers":["UniProtKB:Q9Y7K2"],"synonyms":[{"name":"PI3-kinase tor2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PI3K tor2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-3-kinase tor2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MTOR","type":"exact"}],"termid":"PR:Q9Y7K2"}


id: GO:0160216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-lactoyl-L-lysyl-[protein] = (S)-lactate + L-lysyl-[protein].","definition_xrefs":["PMID:35044827","RHEA:81387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"deacylase activity","termid":"GO:0160215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"protein lysine delactylase activity","termid":"GO:0160216"}


id: GO:0075113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of transmembrane receptor-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host transmembrane receptor-mediated signal transduction (obsolete GO:0075113)","synonyms":[{"name":"positive regulation by symbiont of host transmembrane receptor-mediated signal transduction","type":"exact"}],"termid":"GO:0075113"}


id: GO:0033790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxymethylfurfural + NAD(P)H + H+ = 2,5-bis-hydroxymethylfuran + NAD(P)+.","definition_xrefs":["PMID:16652391","GOC:mah","GOC:jp","PMID:15338422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxymethylfurfural reductase activity","termid":"GO:0033790"}


id: PBO:0090257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase complex subunit H","termid":"PBO:0090257"}


id: PBO:0004494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTR family peptide transporter (predicted)","termid":"PBO:0004494"}


id: PBO:0090397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Vps4","termid":"PBO:0090397"}


id: MONDO:0019263
data:
  {"annotated_genes":["SJAG_01841"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"}]},"cv_name":"mondo","definition":"Erythropoietic protoporphyria (EPP) is an inherited disorder of the heme metabolic pathway characterized by accumulation of protoporphyrin in blood, erythrocytes and tissues, and cutaneous manifestations of photosensitivity.","definition_xrefs":["Orphanet:79278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythropoietic protoporphyria","termid":"MONDO:0001676"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0019142","MONDO:0005093","MONDO:0004335","MONDO:0005066","MONDO:0002515"],"is_obsolete":false,"name":"autosomal erythropoietic protoporphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200815","GARD:4527","MedDRA:10015289"],"synonyms":[{"name":"EPP","type":"exact"}],"termid":"MONDO:0019263","terms_by_termid":{"MONDO:0008319":null},"xrefs":{"Monarch":{"xref_id":"0019263"}}}


id: GO:0009099
data:
  {"annotated_genes":["SJAG_06635","SJAG_04098","SJAG_04149","SJAG_00396","SJAG_03985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58687,64047,76454,77346,80295],"is_not":false,"summary":null,"term":"GO:0009099"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of valine, 2-amino-3-methylbutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valine metabolic process","termid":"GO:0006573"},{"relation_name":"is_a","term_name":"pyruvate family amino acid biosynthetic process","termid":"GO:0009079"},{"relation_name":"is_a","term_name":"branched-chain amino acid biosynthetic process","termid":"GO:0009082"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00396":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-valine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"secondary_identifiers":["MetaCyc:VALSYN-PWY"],"synonyms":[{"name":"valine anabolism","type":"exact"},{"name":"valine biosynthesis","type":"exact"},{"name":"valine formation","type":"exact"},{"name":"valine synthesis","type":"exact"}],"termid":"GO:0009099","terms_by_termid":{"GO:0009099":null}}


id: PBO:0033745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_circular_minichromosome_loss_during_vegetative_growth","termid":"PBO:0033745"}


id: MOD:01797
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal 1'-phosphohistidine residue to 1'-phosphohistidine immonium ion.","definition_xrefs":["PubMed:20847263","PubMed:17690871","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"1'-phospho-L-histidine","termid":"MOD:00044"},{"relation_name":"is_a","term_name":"phosphohistidine immonium ion","termid":"MOD:01791"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-phosphohistidine immonium ion","synonyms":[{"name":"2-((1-phosphono-1H-imidazol-4-yl)ethaniminium","type":"exact"},{"name":"Ntau-phosphorylated L-histidine","type":"exact"}],"termid":"MOD:01797"}


id: GO:0009841
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A Clp endopeptidase complex located in the mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase Clp complex","termid":"GO:0009368"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitochondrial endopeptidase Clp complex","termid":"GO:0009841"}


id: PBO:0003896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S21","termid":"PBO:0003896"}


id: PBO:0072776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum amyloid A like 1","termid":"PBO:0072776"}


id: PBO:0059407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S33 pseudogene 4","termid":"PBO:0059407"}


id: PBO:0066846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 146","termid":"PBO:0066846"}


id: MONDO:0008125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 5","secondary_identifiers":["DOID:0080083","MEDGEN:318994","MESH:C563503","UMLS:C1833909","OMIM:164800"],"synonyms":[{"name":"NDNC5","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 5","type":"related"},{"name":"nonsyndromic congenital nail disorder type 5","type":"exact"},{"name":"onycholysis, hereditary distal","type":"related"},{"name":"onycholysis, partial, with scleronychia","type":"related"}],"termid":"MONDO:0008125","xrefs":{"Monarch":{"xref_id":"0008125"}}}


id: PBO:0038760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 5","termid":"PBO:0038760"}


id: PBO:0050314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 16","termid":"PBO:0050314"}


id: PBO:0057347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 542","termid":"PBO:0057347"}


id: PBO:0059498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"msh homeobox 1","termid":"PBO:0059498"}


id: PR:O94468
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mag2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.11","synonyms":[{"name":"3-methyladenine DNA glycosidase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"3MEA DNA glycosylase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mag2","type":"exact"}],"termid":"PR:O94468"}


id: MONDO:1011150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ankylosing spondylitis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ankylosing spondylitis, non-human animal","termid":"MONDO:1010292"},{"relation_name":"is_a","term_name":"rheumatoid arthritis, dog","termid":"MONDO:1011153"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankylosing spondylitis, dog","secondary_identifiers":["OMIA:000046-9615"],"termid":"MONDO:1011150","xrefs":{"Monarch":{"xref_id":"1011150"}}}


id: GO:0002117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the amphibian larva over time, from its formation to the mature structure. Amphibian larvae, sometimes called pollywogs or tadpoles, hatch from eggs and begin to grow limbs and other adult physical features at various times, depending on the species, before they metamorphose into the adult form.","definition_xrefs":["PMID:27143402","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval development","termid":"GO:0002164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amphibian larval development","termid":"GO:0002117"}


id: MONDO:0012482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"West-Nile encephalitis","termid":"MONDO:0019376"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"West Nile virus, susceptibility to","secondary_identifiers":["UMLS:C1835867","MEDGEN:372145","OMIM:610379"],"synonyms":[{"name":"WNV, susceptibility to","type":"related"},{"name":"West Nile virus, susceptibility to","type":"exact"}],"termid":"MONDO:0012482","xrefs":{"Monarch":{"xref_id":"0012482"}}}


id: MONDO:0005911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by fever, conjunctivitis, and pharyngitis resulting from infection by adenovirus.","definition_xrefs":["NCIT:C34924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pharyngoconjunctival fever","secondary_identifiers":["DOID:13801","ICD9:077.2","MEDGEN:14722","SCTID:70385007","UMLS:C0031351","MESH:D000258"],"synonyms":[{"name":"Adenoviral pharyngoconjunctivitis","type":"exact"},{"name":"pharyngo-conjunctival fever","type":"exact"},{"name":"pharyngoconjunctival fever","type":"exact"}],"termid":"MONDO:0005911","xrefs":{"Monarch":{"xref_id":"0005911"}}}


id: SO:2000061
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence referred to by an entry in a databank such as GenBank or SwissProt.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"databank_entry","synonyms":[{"name":"accession","type":"related"},{"name":"databank entry","type":"exact"}],"termid":"SO:2000061"}


id: PBO:0081721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF649 antisense RNA 1","termid":"PBO:0081721"}


id: GO:0019549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glutamate into succinate, that includes the conversion of 4-aminobutyrate to succinate semialdehyde by the pyruvate-dependent gamma aminobutyrate (GABA) transaminase.","definition_xrefs":["GOC:bf","MetaCyc:PWY-4321","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate catabolic process to succinate via succinate semialdehyde (obsolete GO:0019549)","termid":"GO:0019549"}


id: PBO:0086739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; partially overlaps verified gene ERV2/YPR037C but doesn't share phenotypes; also overlaps dubious ORF YPR039W; null mutant displays increased levels of spontaneous Rad52p foci, increased biofilm information, different altered sensitivities to various chemcicals","termid":"PBO:0086739"}


id: PBO:0089184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps51","termid":"PBO:0089184"}


id: GO:0070778
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96889],"is_not":false,"summary":null,"term":"GO:0070778"}]},"cv_name":"biological_process","definition":"The directed movement of L-aspartate across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate transmembrane transport","termid":"GO:0015810"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"L-aspartate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0089712"],"synonyms":[{"name":"L-aspartate transport","type":"broad"}],"termid":"GO:0070778","terms_by_termid":{"GO:0070778":null}}


id: PBO:0059086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MON2 antisense RNA 1","termid":"PBO:0059086"}


id: MONDO:1010419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narcolepsy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narcolepsy, non-human animal","termid":"MONDO:1010003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy, domestic cat","secondary_identifiers":["OMIA:000703-9685"],"termid":"MONDO:1010419","xrefs":{"Monarch":{"xref_id":"1010419"}}}


id: PBO:0084857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; protein abundance increases in response to DNA replication stress","termid":"PBO:0084857"}


id: _global:capable_of_negatively_regulating
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Holds between c and p if and only if c is capable of some activity a, and a negatively regulates p.","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_regulating","termid":"_global:capable_of_regulating"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_negatively_regulating","secondary_identifiers":["RO:0002597"],"termid":"_global:capable_of_negatively_regulating"}


id: PBO:0034729
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"although this is demonstrated to be a DNA polymerase epsilon interactor and named Dpb3, it appears to be the ortholog of S. cerevisiae BUR6 and human DRAP1. The Dpb3 ortholog appears to be the recently identified SPCC16C4.22","termid":"PBO:0034729"}


id: PBO:0002657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation diffusion family zinc membrane transporter Cis4","termid":"PBO:0002657"}


id: PBO:0067010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 18, pseudogene","termid":"PBO:0067010"}


id: PBO:0028709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0028709"}


id: MONDO:0002847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from skeletal muscle.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle neoplasm","termid":"MONDO:0002848"},{"relation_name":"is_a","term_name":"muscle cancer","termid":"MONDO:0005864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"skeletal muscle cancer","secondary_identifiers":["UMLS:C1334619","DOID:4043","MEDGEN:233669","NCIT:C6516"],"synonyms":[{"name":"cancer of skeletal muscle tissue","type":"exact"},{"name":"malignant neoplasm of skeletal muscle","type":"exact"},{"name":"malignant neoplasm of skeletal muscle tissue","type":"exact"},{"name":"malignant neoplasm of the skeletal muscle","type":"exact"},{"name":"malignant skeletal muscle neoplasm","type":"exact"},{"name":"malignant skeletal muscle tissue neoplasm","type":"exact"},{"name":"malignant skeletal muscle tumor","type":"exact"},{"name":"malignant skeletal muscle tumour","type":"exact"},{"name":"malignant tumor of skeletal muscle","type":"exact"},{"name":"malignant tumor of the skeletal muscle","type":"exact"},{"name":"malignant tumour of skeletal muscle","type":"exact"},{"name":"malignant tumour of the skeletal muscle","type":"exact"},{"name":"skeletal muscle tissue cancer","type":"exact"}],"termid":"MONDO:0002847","xrefs":{"Monarch":{"xref_id":"0002847"}}}


id: PBO:0000855
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.1","termid":"PBO:0000855"}


id: MONDO:0011068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus in which the cause of the disease is a mutation in the CTLA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 12","secondary_identifiers":["DOID:0110751","MESH:C563326","OMIM:601388","MEDGEN:318618","UMLS:C1832392"],"synonyms":[{"name":"CTLA4 type 1 diabetes mellitus","type":"exact"},{"name":"IDDM12","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 12","type":"related"},{"name":"diabetes mellitus, insulin-dependent, type 12","type":"exact"},{"name":"insulin-dependent diabetes mellitus 12","type":"exact"},{"name":"type 1 diabetes mellitus caused by mutation in CTLA4","type":"exact"}],"termid":"MONDO:0011068","xrefs":{"Monarch":{"xref_id":"0011068"}}}


id: PBO:0028757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1_phase_entry_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028757"}


id: MONDO:0013117
data:
  {"annotated_genes":["SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85887],"is_not":false,"summary":null,"term":"MONDO:0013117"}]},"cv_name":"mondo","definition":"Any progressive external ophthalmoplegia with mitochondrial DNA deletions in which the cause of the disease is a mutation in the RRM2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant progressive external ophthalmoplegia","termid":"MONDO:0008003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320","MONDO:0004069","MONDO:0000426","MONDO:0005066"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:413981","UMLS:C2751319","DOID:0111518","OMIM:613077","GARD:16501","MESH:C567768"],"synonyms":[{"name":"PEOA5","type":"related"},{"name":"RRM2B progressive external ophthalmoplegia with mitochondrial DNA deletions","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions caused by mutation in RRM2B","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 5","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant type 5","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal dominant 5","type":"related"}],"termid":"MONDO:0013117","terms_by_termid":{"MONDO:0013117":null},"xrefs":{"Monarch":{"xref_id":"0013117"}}}


id: GO:0010795
data:
  {"annotated_genes":["SJAG_01672"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904775"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquinone biosynthesis. Ubiquinone biosynthesis consists of the chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"regulates","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006744"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006744","GO:0008150"],"is_obsolete":false,"name":"regulation of ubiquinone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010795","terms_by_termid":{"GO:1904775":null}}


id: SO:0002380
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for pseudouridylation_guide_snoRNA. A snoRNA that specifies the site of pseudouridylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H_ACA_box_snoRNA_gene","termid":"SO:0002376"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridylation_guide_snoRNA_gene","synonyms":[{"name":"pseudouridylation guide snoRNA gene","type":"exact"}],"termid":"SO:0002380"}


id: PBO:0051810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif and ubiquitin domain containing","termid":"PBO:0051810"}


id: GO:0034646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid monolayer that surrounds and encloses an organelle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"intracellular organelle","termid":"GO:0043229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organelle-enclosing lipid monolayer","termid":"GO:0034646"}


id: PBO:0034589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_lysophosphatidylethanolamine_level","termid":"PBO:0034589"}


id: MONDO:0035235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare subtype of pyoderma gangrenosum disease characterized by rapidly progressive, single or multiple, painful, aseptic ulcers which present overhanging, violaceous and undermined borders, surrounding induration and erythema, and granulation tissue (occasionally necrotic tissue and/or a purulent exudate) at the base, mainly affecting the legs (but other body surfaces may also be involved), leading to chronic ulcerations and often regressing with cribriform mutilating scars. The disease presents a chronic relapsing course and systemic features (e.g. fever, malaise, arthralgia, myalgia) may be associated.","definition_xrefs":["Orphanet:538863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyoderma gangrenosum","termid":"MONDO:0018824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"classic pyoderma gangrenosum","secondary_identifiers":["ICD10CM:L88","GARD:22220","MEDGEN:1814456","UMLS:C5680157"],"synonyms":[{"name":"Ulcerative pyoderma gangrenosum","type":"exact"}],"termid":"MONDO:0035235","xrefs":{"Monarch":{"xref_id":"0035235"}}}


id: GO:0060434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the bronchus is generated and organized. The bronchus is the portion of the airway that connects to the lungs.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"bronchus development","termid":"GO:0060433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bronchus morphogenesis","termid":"GO:0060434"}


id: PBO:0002638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentafunctional aromatic polypeptide Aro1 (predicted)","termid":"PBO:0002638"}


id: MONDO:0009927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any 3MC syndrome in which the cause of the disease is a mutation in the COLEC11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3MC syndrome","termid":"MONDO:0017398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3MC syndrome 2","secondary_identifiers":["Orphanet:2998","GARD:18428","UMLS:C0796279","MESH:C535586","MEDGEN:167115","DOID:0060576","EFO:1001977","OMIM:265050"],"synonyms":[{"name":"3MC syndrome 2","type":"exact"},{"name":"3MC syndrome caused by mutation in COLEC11","type":"exact"},{"name":"3MC syndrome type 2","type":"exact"},{"name":"3MC2","type":"related"},{"name":"3Mc syndrome type 2","type":"exact"},{"name":"COLEC11 3MC syndrome","type":"exact"},{"name":"Carnevale syndrome","type":"related"},{"name":"Carnevale syndrome, formerly","type":"related"},{"name":"Osa syndrome","type":"related"},{"name":"oculo-skeletal-abdominal syndrome","type":"related"},{"name":"ptosis of eyelids with diastasis recti and hip dysplasia","type":"related"}],"termid":"MONDO:0009927","xrefs":{"Monarch":{"xref_id":"0009927"}}}


id: GO:0042975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a peroxisome proliferator activated receptor, alpha, beta or gamma.","definition_xrefs":["GOC:jl","PMID:12769781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"peroxisome proliferator activated receptor binding","synonyms":[{"name":"PPAR binding","type":"exact"}],"termid":"GO:0042975"}


id: MONDO:0100212
data:
  {"annotated_genes":["SJAG_02326","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86214,86215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100221"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"IFAP syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:327007","UMLS:C1839988","GARD:2952","Orphanet:2273","OMIMPS:308205"],"synonyms":[{"name":"IFAP syndrome","type":"exact"},{"name":"ichthyosis follicularis-alopecia-photophobia syndrome","type":"exact"},{"name":"ichthyosis follicularis-atrichia-photophobia syndrome","type":"exact"}],"termid":"MONDO:0100212","terms_by_termid":{"MONDO:0100221":null},"xrefs":{"Monarch":{"xref_id":"0100212"}}}


id: MONDO:0006846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe hypertension that is characterized by rapid onset of extremely high blood pressure and hypertension-mediated organ damage.","definition_xrefs":["NCIT:P378","PMID:30165516","PMID:38658108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertensive disorder","termid":"MONDO:0005044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hypertension","secondary_identifiers":["MEDGEN:9374","MESH:D006974","UMLS:C0020540","SCTID:70272006","DOID:10824","EFO:1001031","MedDRA:10025600"],"synonyms":[{"name":"MHT","type":"broad"},{"name":"accelerated-malignant hypertension","type":"exact"},{"name":"hypertensive emergency","type":"exact"},{"name":"malignant phase hypertension","type":"exact"}],"termid":"MONDO:0006846","xrefs":{"Monarch":{"xref_id":"0006846"}}}


id: GO:0047198
data:
  {"annotated_genes":["SJAG_01899"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88575],"is_not":false,"summary":null,"term":"GO:0047198"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-substituted L-cysteine + acetyl-CoA = S-substituted N-acetyl-L-cysteine + CoA + H+.","definition_xrefs":["RHEA:19213","EC:2.3.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid N-acetyltransferase activity","termid":"GO:0140085"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01899":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"L-cysteine-S-conjugate N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R04950","MetaCyc:2.3.1.80-RXN","Reactome:R-HSA-5433066"],"synonyms":[{"name":"acetyl-CoA:S-substituted L-cysteine N-acetyltransferase activity","type":"related"},{"name":"cysteine-S-conjugate N-acetyltransferase activity","type":"exact"}],"termid":"GO:0047198","terms_by_termid":{"GO:0047198":null}}


id: GO:0036244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a neutral pH (pH close to 7) stimulus. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["Wikipedia:PH","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to neutral pH","termid":"GO:0036176"},{"relation_name":"is_a","term_name":"cellular response to pH","termid":"GO:0071467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to neutral pH","termid":"GO:0036244"}


id: PBO:0087111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal stalk protein P1 alpha; involved in the interaction between translational elongation factors and the ribosome; free (non-ribosomal) P1 stimulates the phosphorylation of the eIF2 alpha subunit (Sui2p) by Gcn2p; accumulation of P1 in the cytoplasm is regulated by phosphorylation and interaction with the P2 stalk component","termid":"PBO:0087111"}


id: PBO:0046926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 43 member B","termid":"PBO:0046926"}


id: MONDO:0100544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A precancerous condition characterized by the gradual, clonal expansion of hematopoietic stem and progenitor cells carrying specific, disruptive, and recurrent genetic variants, in individuals without clear diagnosis of hematological malignancies. It is associated with an increased risk of developing hematologic cancers.","definition_xrefs":["NCIT:C155821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clonal hematopoiesis","termid":"MONDO:0100542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"age-related clonal hematopoiesis","secondary_identifiers":["MEDGEN:1670618","UMLS:C4722404"],"synonyms":[{"name":"ARCH","type":"exact"}],"termid":"MONDO:0100544","xrefs":{"Monarch":{"xref_id":"0100544"}}}


id: PBO:0066696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability 2","termid":"PBO:0066696"}


id: MONDO:0009323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Halothane hepatitis","secondary_identifiers":["MESH:C562477","SCTID:235873001","MEDGEN:66842","OMIM:234350","UMLS:C0241913"],"synonyms":[{"name":"Halothane hepatitis","type":"exact"}],"termid":"MONDO:0009323","xrefs":{"Monarch":{"xref_id":"0009323"}}}


id: MONDO:0019241
data:
  {"annotated_genes":["SJAG_01216","SJAG_03316","SJAG_01612","SJAG_00988","SJAG_01995","SJAG_01162","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009825"},{"annotations":[86579,86580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009285"},{"annotations":[86260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[86135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009947"},{"annotations":[86564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[87212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[85506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009593"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01162":null,"SJAG_01216":null,"SJAG_01351":null,"SJAG_01612":null,"SJAG_01995":null,"SJAG_03316":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of the gamma-glutamyl cycle","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79196","icd11.foundation:34853044","UMLS:C0268517","SCTID:9128006","GARD:18970","MEDGEN:541345"],"synonyms":[{"name":"disorder of gamma-glutamyl cycle","type":"related"},{"name":"disorder of the gamma-glutamyl cycle","type":"related"}],"termid":"MONDO:0019241","terms_by_termid":{"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009285":null,"MONDO:0009593":null,"MONDO:0009825":null,"MONDO:0009947":null,"MONDO:0019531":null},"xrefs":{"Monarch":{"xref_id":"0019241"}}}


id: GO:0097577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining iron ions such that they are separated from other components of a biological system.","definition_xrefs":["PMID:3099306","GOC:mr"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of iron ion (obsolete GO:0097577)","synonyms":[{"name":"iron ion retention","type":"exact"},{"name":"iron ion sequestering","type":"exact"},{"name":"iron ion sequestration","type":"exact"},{"name":"iron ion storage","type":"exact"},{"name":"retention of iron ion","type":"exact"},{"name":"sequestration of iron ion","type":"exact"},{"name":"storage of iron ion","type":"exact"}],"termid":"GO:0097577"}


id: PBO:0068724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 13, pseudogene","termid":"PBO:0068724"}


id: PBO:0033757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle_pole_body_duplication","termid":"PBO:0033757"}


id: PBO:0067035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 49, pseudogene","termid":"PBO:0067035"}


id: PATO:0001322
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is 180 degrees to another entity.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"straight angle to","termid":"PATO:0001322"}


id: GO:0097601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retina homeostatic process preventing the degeneration of a retina blood vessel.","definition_xrefs":["GOC:jh2","PMID:23093773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retina homeostasis","termid":"GO:0001895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina blood vessel maintenance","synonyms":[{"name":"maintenance of choriocapillaris","type":"narrow"},{"name":"maintenance of retina blood vessel","type":"exact"},{"name":"maintenance of retinal blood vessel","type":"exact"}],"termid":"GO:0097601"}


id: MONDO:0013287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal agammaglobulinemia in which the cause of the disease is a mutation in the IGLL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal agammaglobulinemia","termid":"MONDO:0011096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"agammaglobulinemia 2, autosomal recessive","secondary_identifiers":["OMIM:613500","UMLS:C3150750","MEDGEN:462100","GARD:15672","DOID:0060024","DOID:0081135"],"synonyms":[{"name":"AGM2","type":"exact"},{"name":"IGLL1 autosomal agammaglobulinemia","type":"exact"},{"name":"agammaglobulinemia 2, autosomal recessive","type":"exact"},{"name":"agammaglobulinemia, autosomal recessive, due to IGLL1 defect","type":"exact"},{"name":"autosomal agammaglobulinemia caused by mutation in IGLL1","type":"exact"},{"name":"lambda 5 deficiency","type":"exact"}],"termid":"MONDO:0013287","xrefs":{"Monarch":{"xref_id":"0013287"}}}


id: PBO:0057070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 151a","termid":"PBO:0057070"}


id: PBO:0017073
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae RPR1","termid":"PBO:0017073"}


id: PomGeneEx:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A qualifier that describes a level of protein observed under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein expression level","termid":"PomGeneEx:0000010"}


id: PBO:0046998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A1","termid":"PBO:0046998"}


id: GO:1900952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 18-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"regulation of 18-methylnonadec-1-ene biosynthetic process","termid":"GO:1900950"},{"relation_name":"is_a","term_name":"positive regulation of 18-methylnonadec-1-ene metabolic process","termid":"GO:1900955"},{"relation_name":"positively_regulates","term_name":"18-methylnonadec-1-ene biosynthetic process","termid":"GO:1900881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of 18-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"activation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"activation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"activation of 18-methylnonadec-1-ene biosynthetic process","type":"narrow"},{"name":"activation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"activation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900952"}


id: MONDO:0008637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bifid uvula is a fissure type embryopathy affecting the uvula at the back of the soft palate.","definition_xrefs":["Orphanet:99771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate","termid":"MONDO:0016064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifid uvula","secondary_identifiers":["MEDGEN:1646931","SCTID:18910001","UMLS:C4551488","GARD:19687","icd11.foundation:684398038","OMIM:192100"],"synonyms":[{"name":"bifidity of the uvula","type":"exact"},{"name":"uvula, bifid","type":"related"},{"name":"uvula, cleft","type":"related"},{"name":"uvular cleft","type":"exact"}],"termid":"MONDO:0008637","xrefs":{"Monarch":{"xref_id":"0008637"}}}


id: PBO:0000491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptin family","termid":"PBO:0000491"}


id: FYPO:0006434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical node of a cell is decreased, and the protein is instead detected distributed throughout the cell cortex. There may be little or no protein detected at the medial cortical node.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to medial cortical node","termid":"FYPO:0006326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to medial cortical node, with protein distributed in cell cortex, during vegetative growth","synonyms":[{"name":"cortical drift","type":"related"},{"name":"decreased protein localisation to medial cortical node during vegetative growth, with protein distributed in cell cortex","type":"exact"},{"name":"decreased protein localisation to medial cortical node, with protein distributed in cell cortex, during vegetative growth","type":"exact"},{"name":"decreased protein localization to cytokinetic nodes, with protein distributed in cell cortex, during vegetative growth","type":"related"},{"name":"decreased protein localization to medial cortical node during vegetative growth, with protein distributed in cell cortex","type":"exact"},{"name":"decreased protein localization to medial cortical node during vegetative growth, with protein distributed in cortex","type":"exact"},{"name":"decreased protein localization to medial cortical node, with protein distributed in cell cortex, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to medial cortical node, with protein distributed in cortex, during vegetative growth","type":"exact"},{"name":"decreased protein recruitment to medial cortical node, with protein distributed in cell cortex, during vegetative growth","type":"related"},{"name":"reduced protein localization to medial cortical node during vegetative growth, with protein distributed in cell cortex","type":"exact"},{"name":"reduced protein localization to medial cortical node, with protein distributed in cell cortex, during vegetative growth","type":"exact"}],"termid":"FYPO:0006434"}


id: PBO:0082935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic ATPase that is a ribosome-associated molecular chaperone; functions with J-protein partner Zuo1p; may be involved in the folding of newly-synthesized polypeptide chains; member of the HSP70 family; SSB2 has a paralog, SSB1, that arose from the whole genome duplication","termid":"PBO:0082935"}


id: SO:0001643
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A telomerase RNA gene is a non coding RNA gene the RNA product of which is a component of telomerase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase_RNA_gene","secondary_identifiers":["http:http\\://en.wikipedia.org/wiki/Telomerase_RNA_component"],"synonyms":[{"name":"TERC","type":"exact"},{"name":"Telomerase RNA component","type":"exact"},{"name":"telomerase RNA gene","type":"exact"}],"termid":"SO:0001643"}


id: GO:0005898
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-13; consists of two chains, interleukin-13 receptor alpha1 chain and interleukin-4 receptor alpha chain.","definition_xrefs":["PMID:8552669","PMID:9013879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interleukin-13 receptor complex","synonyms":[{"name":"IL-13 receptor complex","type":"exact"}],"termid":"GO:0005898"}


id: PBO:0002583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal signaling protein (predicted)","termid":"PBO:0002583"}


id: MONDO:0009405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cervical hypertrichosis peripheral neuropathy is a rare syndrome characterized by the association of congenital hypertrichosis in the anterior cervical region with peripheral sensory and motor neuropathy. It has been described in three members of the same family and in one unrelated boy. Associated features in the familial cases include retinal anomalies, spina bifida, kyphoscoliosis and hallux valgus, while that in the non-familial case includes developmental delay. An autosomal recessive mode of inheritance is suggested. There have been no further descriptions in the literature since 1993.","definition_xrefs":["Orphanet:2218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"cervical hypertrichosis-peripheral neuropathy syndrome","secondary_identifiers":["GARD:1226","MESH:C565492","UMLS:C1855902","OMIM:239840","MEDGEN:341004"],"synonyms":[{"name":"cervical hypertrichosis peripheral neuropathy","type":"related"},{"name":"hypertrichosis, congenital anterior cervical, with peripheral sensory and motor neuropathy","type":"related"}],"termid":"MONDO:0009405","xrefs":{"Monarch":{"xref_id":"0009405"}}}


id: PBO:0042851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 61","termid":"PBO:0042851"}


id: PBO:0030381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cycloheximide","termid":"PBO:0030381"}


id: GO:0061607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propionyl-CoA + peptide = CoA + N-alpha-propionylpeptide. This reaction is the propionylation of the N-terminal amino acid residue of a peptide or protein.","definition_xrefs":["PMID:23043182","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptide alpha-N-propionyltransferase activity","synonyms":[{"name":"N-terminal propionyltransferase activity","type":"exact"}],"termid":"GO:0061607"}


id: MONDO:0032567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital growth hormone deficiency","termid":"MONDO:0000050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated growth hormone deficiency, type 4","secondary_identifiers":["MEDGEN:1648300","UMLS:C4722273","OMIM:618157"],"synonyms":[{"name":"Dwarfism of Sindh","type":"related"},{"name":"IGHD4","type":"related"},{"name":"ISOLATED GROWTH HORMONE DEFICIENCY, TYPE IV","type":"related"},{"name":"Isolated Growth Hormone Deficiency, Type Ib","type":"related"},{"name":"Isolated Growth Hormone Deficiency, Type Ib, Formerly","type":"related"},{"name":"growth hormone deficiency, isolated, type IV","type":"exact"}],"termid":"MONDO:0032567","xrefs":{"Monarch":{"xref_id":"0032567"}}}


id: PBO:0073055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCYL2 pseudogene 1","termid":"PBO:0073055"}


id: PBO:0072593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoschisin 1","termid":"PBO:0072593"}


id: MONDO:0013701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MRT32 (obsolete MONDO:0013701)","secondary_identifiers":["OMIM:614339"],"termid":"MONDO:0013701","xrefs":{"Monarch":{"xref_id":"0013701"}}}


id: PBO:0051921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 4","termid":"PBO:0051921"}


id: PBO:0040894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein receptor type 1B","termid":"PBO:0040894"}


id: MOD:01573
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01573"}


id: FYPO:0007467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which trimethylation of lysine at position 9 of histone H3 occurs to a greater extent than normal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation","termid":"FYPO:0007466"},{"relation_name":"is_a","term_name":"abnormal histone modification during G0","termid":"FYPO:0007470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 methylation during G0","synonyms":[{"name":"increased histone H3 K9 methylation during G0","type":"exact"},{"name":"increased histone H3-K9 methylation during cell quiescence","type":"exact"},{"name":"increased histone H3-K9 methylation during quiescence","type":"exact"},{"name":"increased histone H3K9me during G0","type":"exact"},{"name":"increased histone lysine H3 K9 methylation during G0","type":"exact"}],"termid":"FYPO:0007467"}


id: SO:0000206
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repetitive element, a few hundred base pairs long, that is dispersed throughout the genome. A common human SINE is the Alu element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_LTR_retrotransposon","termid":"SO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SINE_element","secondary_identifiers":["http://en.wikipedia.org/wiki/Short_interspersed_nuclear_element"],"synonyms":[{"name":"SINE element","type":"exact"},{"name":"Short interspersed element","type":"exact"},{"name":"Short interspersed nuclear element","type":"exact"}],"termid":"SO:0000206"}


id: PBO:0025489
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA Like Protein","termid":"PBO:0025489"}


id: MONDO:1012480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cervical vertebral compressive myelopathy, non-human animal","termid":"MONDO:1011891"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical vertebral compressive myelopathy, mountain zebra","secondary_identifiers":["OMIA:001894-9791"],"termid":"MONDO:1012480","xrefs":{"Monarch":{"xref_id":"1012480"}}}


id: PBO:0083390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps IES1/YFL013C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083390"}


id: GO:0023040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which information is sent from one location to another, within a living organism or between living organisms, via ionic flux.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signaling via ionic flux (obsolete GO:0023040)","synonyms":[{"name":"signaling via ionic flux","type":"exact"},{"name":"signalling via ionic flux","type":"exact"}],"termid":"GO:0023040"}


id: GO:0043172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ferredoxin, any simple, nonenzymatic iron-sulfur protein that is characterized by having equal numbers of atoms of iron and labile sulfur. Iron and sulfur atoms are present in one or two clusters of two or four atoms of each.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete ferredoxin biosynthetic process (obsolete GO:0043172)","synonyms":[{"name":"ferredoxin anabolism","type":"exact"},{"name":"ferredoxin biosynthesis","type":"exact"},{"name":"ferredoxin formation","type":"exact"},{"name":"ferredoxin synthesis","type":"exact"}],"termid":"GO:0043172"}


id: PBO:0039763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine phosphoribosyltransferase","termid":"PBO:0039763"}


id: MONDO:0014820
data:
  {"annotated_genes":["SJAG_02656"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86182],"is_not":false,"summary":null,"term":"MONDO:0014820"}]},"cv_name":"mondo","definition":"Any mitochondrial DNA depletion syndrome in which the cause of the disease is a mutation in the OPA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 14 (cardioencephalomyopathic type)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080336","UMLS:C4225163","OMIM:616896","MEDGEN:903789"],"synonyms":[{"name":"MTDPS14","type":"exact"},{"name":"OPA1 mitochondrial DNA depletion syndrome","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 14 (cardioencephalomyopathic type)","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 14 (cardioencephalomyopathic type); MTDPS14","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 14 (encephalocardiomyopathic type)","type":"exact"},{"name":"mitochondrial DNA depletion syndrome caused by mutation in OPA1","type":"exact"}],"termid":"MONDO:0014820","terms_by_termid":{"MONDO:0014820":null},"xrefs":{"Monarch":{"xref_id":"0014820"}}}


id: FYPO:0005176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ferric-chelate reductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal ferric-chelate reductase activity","termid":"FYPO:0001847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"increased ferric-chelate reductase activity","termid":"FYPO:0005176"}


id: MONDO:0013100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 8","secondary_identifiers":["OMIM:613055","GARD:15609","MEDGEN:414420","UMLS:C2751607","MESH:C567802"],"synonyms":[{"name":"ATFB8","type":"exact"},{"name":"atrial fibrillation, familial, 8","type":"exact"}],"termid":"MONDO:0013100","xrefs":{"Monarch":{"xref_id":"0013100"}}}


id: GO:1990767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the uptake of a prostaglandin receptor into an endocytic vesicle.","definition_xrefs":["PMID:15937517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor internalization","termid":"GO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"prostaglandin receptor internalization","termid":"GO:1990767"}


id: GO:0006418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, to be used in ribosome-mediated polypeptide synthesis.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation","termid":"GO:0043039"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399","GO:0006520"],"is_obsolete":false,"name":"tRNA aminoacylation for protein translation","secondary_identifiers":["MetaCyc:TRNA-CHARGING-PWY","Reactome:R-HSA-379724"],"synonyms":[{"name":"tRNA charging","type":"narrow"}],"termid":"GO:0006418"}


id: GO:0061307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a cardiac neural crest cell that will migrate to the heart and contribute to its development. Cardiac neural crest cells are specialized cells that migrate toward the heart from the third, fourth and sixth pharyngeal arches.","definition_xrefs":["GOC:mtg_heart","PMID:19705442","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell differentiation","termid":"GO:0014033"},{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neural crest cell differentiation involved in heart development","termid":"GO:0061307"}


id: GO:0061229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric juxtaglomerulus cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerulus cell development","termid":"GO:0072142"},{"relation_name":"part_of","term_name":"mesonephric juxtaglomerulus cell differentiation","termid":"GO:0061207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric juxtaglomerulus cell development","termid":"GO:0061229"}


id: MONDO:0007318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alagille (AGS) syndrome is variably characterized by chronic cholestasis due to paucity of intrahepatic bile ducts, peripheral pulmonary artery stenosis, vertebrae segmentation anomalies, characteristic facies, posterior embryotoxon/anterior segment abnormalities, pigmentary retinopathy, and dysplastic kidneys.","definition_xrefs":["Orphanet:52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0005267","MONDO:0005328"],"is_obsolete":false,"name":"Alagille syndrome","secondary_identifiers":["DOID:9245","icd11.foundation:1249656206","NANDO:1200918","NANDO:2200931","NANDO:1200919","OMIMPS:118450","SCTID:31742004","MEDGEN:39014","UMLS:C0085280","MedDRA:10053870","NCIT:C35139","ICD9:759.89","NORD:748","GARD:804","MESH:D016738"],"synonyms":[{"name":"Alagille syndrome","type":"exact"},{"name":"Alagille-Watson syndrome","type":"exact"},{"name":"Arteriohepatic dysplasia","type":"exact"},{"name":"Cardiovertebral syndrome","type":"related"},{"name":"Hepatofacioneurocardiovertebral syndrome","type":"related"},{"name":"Watson Alagille syndrome","type":"related"},{"name":"Watson-Miller syndrome","type":"related"},{"name":"hepatic ductular hypoplasia","type":"related"},{"name":"paucity of interlobular bile ducts","type":"related"},{"name":"syndromic bile duct paucity","type":"exact"}],"termid":"MONDO:0007318","xrefs":{"Monarch":{"xref_id":"0007318"}}}


id: MONDO:0014978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any preimplantation embryonic lethality in which the cause of the disease is a mutation in the PADI6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"gene_count":0,"genotype_count":0,"name":"obsolete preimplantation embryonic lethality 2 (obsolete MONDO:0014978)","secondary_identifiers":["OMIM:617234"],"synonyms":[{"name":"PADI6 preimplantation embryonic lethality","type":"exact"},{"name":"PREMBL2","type":"exact"},{"name":"preimplantation embryonic lethality 2","type":"exact"},{"name":"preimplantation embryonic lethality 2; PREMBL2","type":"exact"},{"name":"preimplantation embryonic lethality caused by mutation in PADI6","type":"exact"},{"name":"preimplantation embryonic lethality type 2","type":"exact"}],"termid":"MONDO:0014978","xrefs":{"Monarch":{"xref_id":"0014978"}}}


id: MONDO:0010704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mildest form of otopalatodigital syndrome spectrum disorder that is characterized by a generalized skeletal dysplasia, mild intellectual disability, conductive hearing loss, and typical facial anomalies.","definition_xrefs":["Orphanet:90650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"otopalatodigital syndrome","termid":"MONDO:0019027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopalatodigital syndrome type 1","secondary_identifiers":["GARD:5121","icd11.foundation:1442049882","MEDGEN:78542","DOID:0111783","NCIT:C118845","OMIM:311300","SCTID:54036001","UMLS:C0265251","ICD9:759.89"],"synonyms":[{"name":"OPD 1 syndrome","type":"exact"},{"name":"OPD I syndrome","type":"exact"},{"name":"OPD syndrome","type":"related"},{"name":"OPD syndrome 1","type":"exact"},{"name":"OPD1","type":"exact"},{"name":"Taybi syndrome","type":"exact"},{"name":"frontootopalatodigital osteodysplasia","type":"related"},{"name":"oto-palato-digital syndrome type 1","type":"exact"},{"name":"otopalatodigital spectrum disorder","type":"related"},{"name":"otopalatodigital syndrome, type 1","type":"exact"},{"name":"otopalatodigital syndrome, type I","type":"exact"},{"name":"otopalatodigital syndrome, type I, X-linked dominant","type":"exact"}],"termid":"MONDO:0010704","xrefs":{"Monarch":{"xref_id":"0010704"}}}


id: GO:0061806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA recombination within centromeric DNA.","definition_xrefs":["GOC:mah","GOC:dph","PMID:27697832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA recombination at centromere","synonyms":[{"name":"regulation of centromeric recombination","type":"exact"}],"termid":"GO:0061806"}


id: PBO:0051400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining-constant/OR18 (pseudogene)","termid":"PBO:0051400"}


id: GO:0071922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a process in which a cohesin complex is transported to, or maintained at, a part of a chromosome that is organized into chromatin.","definition_xrefs":["GOC:lb","PMID:17113138","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cohesin loading (obsolete GO:0071922)","synonyms":[{"name":"regulation of cohesin association with chromatin","type":"exact"},{"name":"regulation of cohesin localisation to chromatin","type":"exact"},{"name":"regulation of cohesin localization to chromatin","type":"exact"}],"termid":"GO:0071922"}


id: MONDO:0014461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the FEZF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 22 with or without anosmia","secondary_identifiers":["MEDGEN:863425","OMIM:616030","GARD:16050","UMLS:C4014988","DOID:0090081","ICD10CM:E23.0"],"synonyms":[{"name":"FEZF1 hypogonadotropic hypogonadism","type":"exact"},{"name":"HH22","type":"related"},{"name":"hypogonadotropic hypogonadism 22 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism 22, with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in FEZF1","type":"exact"}],"termid":"MONDO:0014461","xrefs":{"Monarch":{"xref_id":"0014461"}}}


id: FYPO:0003089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at sites within the eukaryotic rDNA repeat spacer is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000293","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal replication fork arrest at rDNA repeats","synonyms":[{"name":"abnormal replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"abnormal replication fork arrest at ribosomal DNA repeats","type":"exact"}],"termid":"FYPO:0003089"}


id: GO:0006163
data:
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chemical reactions and pathways involving a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic 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id: FYPO:0007616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to diuron. Cells stop growing (and may die) at a concentration of diuron that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to diuron","synonyms":[{"name":"sensitive to 3-(3,4-dichlorophenyl)-1,1-dimethylurea","type":"exact"},{"name":"sensitive to DCMU","type":"exact"},{"name":"sensitive to diuron during mitotic cell cycle","type":"related"},{"name":"sensitive to diuron during vegetative growth","type":"exact"}],"termid":"FYPO:0007616"}


id: GO:0097054
data:
  {"annotated_genes":["SJAG_04145","SJAG_03266","SJAG_04054"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59835,111542,118037],"is_not":false,"summary":null,"term":"GO:0097054"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate biosynthetic process","termid":"GO:0006537"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03266":null,"SJAG_04054":null,"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-glutamate biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"L-glutamate anabolism","type":"exact"},{"name":"L-glutamate biosynthesis","type":"exact"},{"name":"L-glutamate formation","type":"exact"},{"name":"L-glutamate synthesis","type":"exact"}],"termid":"GO:0097054","terms_by_termid":{"GO:0097054":null}}


id: GO:0120022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the glucagon family peptide hormone (e.g. glucagon, glucagon-like peptides, oxyntomodulin, glicentin, ADCYAP1, GHRH, secretin, VIP, GIP).","definition_xrefs":["PMID:17715056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"glucagon family peptide binding","secondary_identifiers":["GO:0120024"],"synonyms":[{"name":"glucagon binding","type":"narrow"},{"name":"glucagon-like peptide binding","type":"narrow"}],"termid":"GO:0120022"}


id: PBO:0013479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase/ serine hydrolase family fusion protein Dfr1","termid":"PBO:0013479"}


id: MONDO:0001127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tendinitis that involves the tibialis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tendinitis","termid":"MONDO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"tibialis tendinitis","secondary_identifiers":["MEDGEN:510515","ICD9:726.72","UMLS:C0158321","DOID:10810","SCTID:50127006"],"synonyms":[{"name":"tendinitis of tibialis","type":"exact"},{"name":"tibialis tendinitis","type":"exact"}],"termid":"MONDO:0001127","xrefs":{"Monarch":{"xref_id":"0001127"}}}


id: GO:0035028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a leading edge cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"leading edge cell fate commitment","termid":"GO:0035027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leading edge cell fate determination","termid":"GO:0035028"}


id: GO:0004951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with cholecystokinin and transmitting the signal across the membrane by activating an associated G-protein to initiate a change in cell activity. Cholecystokinin can act as a neuropeptide or as a gastrointestinal hormone.","definition_xrefs":["PMID:9835394","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"cholecystokinin receptor activity","synonyms":[{"name":"CCK receptor activity","type":"exact"}],"termid":"GO:0004951"}


id: MONDO:0020364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Posterior polymorphous corneal dystrophy (PPCD) is a rare mild subtype of posterior corneal dystrophy characterized by small aggregates of apparent vesicles bordered by a gray haze at the level of Descemet membrane, generally with no effect on vision.","definition_xrefs":["Orphanet:98973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal endothelial dystrophy","termid":"MONDO:0000766"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"posterior corneal dystrophy","termid":"MONDO:0020214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"posterior polymorphous corneal dystrophy","secondary_identifiers":["UMLS:C0339284","DOID:0060457","icd11.foundation:935421185","GARD:16882","MEDGEN:87382","OMIMPS:122000"],"synonyms":[{"name":"PPCD","type":"exact"},{"name":"Schlichting dystrophy","type":"exact"},{"name":"corneal dystrophy, posterior polymorphous","type":"exact"},{"name":"hereditary polymorphus posterior corneal dystrophy","type":"exact"},{"name":"posterior polymorphous dystrophy","type":"exact"}],"termid":"MONDO:0020364","xrefs":{"Monarch":{"xref_id":"0020364"}}}


id: PBO:0047811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box M1","termid":"PBO:0047811"}


id: GO:0015753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-xylose is transported across a lipid bilayer, from one side of a membrane to the other. D-xylose (the naturally occurring enantiomer is always D-) is a constituent of plant polysaccharides.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transport","termid":"GO:0015750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"D-xylose transmembrane transport","synonyms":[{"name":"D-xylose transport","type":"related"}],"termid":"GO:0015753"}


id: GO:0098556
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the rough endoplasmic reticulum membrane that faces the cytoplasm.","definition_xrefs":["GOC:dos","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of endoplasmic reticulum membrane","termid":"GO:0098554"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005789","GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of rough endoplasmic reticulum membrane","termid":"GO:0098556"}


id: FYPO:0004107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G2 phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"},{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during mitotic G2 phase","synonyms":[{"name":"normal protein accumulation during mitotic G2 phase","type":"related"},{"name":"normal protein level during G2 phase of mitotic cell cycle","type":"related"},{"name":"normal protein level during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004107"}


id: GO:0000188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK activity (obsolete GO:0000188)","synonyms":[{"name":"inactivation of MAPK during sporulation","type":"narrow"},{"name":"termination of MAPK activity","type":"exact"}],"termid":"GO:0000188"}


id: GO:0071433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of cell wall organization that results in the restoration of the cell wall following damage.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall repair","termid":"GO:0071433"}


id: PBO:0071842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 37","termid":"PBO:0071842"}


id: PBO:0077102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 9","termid":"PBO:0077102"}


id: MONDO:0012871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Jervell and Lange-Nielsen syndrome in which the cause of the disease is a mutation in the KCNE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jervell and Lange-Nielsen syndrome","termid":"MONDO:0002441"},{"relation_name":"is_a","term_name":"long QT syndrome 5","termid":"MONDO:0013372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Jervell and Lange-Nielsen syndrome 2","secondary_identifiers":["UMLS:C2676723","MEDGEN:394108","MESH:C567343","GARD:10364","OMIM:612347"],"synonyms":[{"name":"JLNS2","type":"related"},{"name":"Jervell and Lange-Nielsen syndrome 2","type":"exact"},{"name":"Jervell and Lange-Nielsen syndrome caused by mutation in KCNE1","type":"exact"},{"name":"Jervell and Lange-Nielsen syndrome type 2","type":"exact"},{"name":"KCNE1 Jervell and Lange-Nielsen syndrome","type":"exact"}],"termid":"MONDO:0012871","xrefs":{"Monarch":{"xref_id":"0012871"}}}


id: PBO:0034683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_non-growing_cell_tip","termid":"PBO:0034683"}


id: MOD:00892
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to D-serine.","definition_xrefs":["PubMed:18025465","PubMed:6893271","RESID:AA0195#CYS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-serine","termid":"MOD:00891"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"D-serine (Cys)","synonyms":[{"name":"(R)-2-amino-3-hydroxypropanoic acid","type":"exact"},{"name":"D-serine","type":"exact"},{"name":"MOD_RES D-serine (Cys)","type":"exact"}],"termid":"MOD:00892"}


id: PBO:0045753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin converting enzyme 1","termid":"PBO:0045753"}


