# terms

id: MONDO:0004547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the testis and is characterized by the presence of a meshwork of small vacuolated cells resulting in a honeycomb appearance.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular yolk sac tumor","termid":"MONDO:0003402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"reticular pattern testicular yolk sac tumor","secondary_identifiers":["UMLS:C1515308","NCIT:C39923","DOID:8392","MEDGEN:271773"],"synonyms":[{"name":"testicular yolk Sac tumor, microcystic pattern","type":"exact"},{"name":"testicular yolk Sac tumor, reticular pattern","type":"exact"}],"termid":"MONDO:0004547","xrefs":{"Monarch":{"xref_id":"0004547"}}}


id: PATO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male fertility which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"male fertile","termid":"PATO:0000891"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased male fertility","synonyms":[{"name":"low male fertility","type":"exact"}],"termid":"PATO:0001833"}


id: GO:0005950
data:
  {"annotated_genes":["SJAG_01455","SJAG_02505"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103811,114963],"is_not":false,"summary":null,"term":"GO:0005950"}]},"cv_name":"cellular_component","definition":"A heterotetrameric enzyme complex made up of two components I and two components II. Catalyzes the formation of anthranilate, pyruvate and L-glutamate from chorismate and L-glutamine.","definition_xrefs":["PMID:4886290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"anthranilate synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ANTHRANSYN-CPLX"],"termid":"GO:0005950","terms_by_termid":{"GO:0005950":null}}


id: PBO:0111345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein","termid":"PBO:0111345"}


id: PBO:0029654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat_shock","termid":"PBO:0029654"}


id: MONDO:0008510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Symphalangism with multiple anomalies of hands and feet is an exceedingly rare syndrome described in one family and characterized by proximal symphalangism and multiple hand and feet disorders (syndactyly, clinodactyly, hypoplasia of the thenar and hypothenar eminences, and a distinctive dermatoglyphic pattern). There have been no further descriptions in the literature since 1981.","definition_xrefs":["Orphanet:3246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symphalangism","termid":"MONDO:0000151"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symphalangism with multiple anomalies of hands and feet","secondary_identifiers":["GARD:5077","UMLS:C1861391","MEDGEN:348859","SCTID:732955001","OMIM:185750","MESH:C566098"],"synonyms":[{"name":"Learman syndrome","type":"exact"},{"name":"symphalangism with multiple anomalies of hands and feet","type":"exact"}],"termid":"MONDO:0008510","xrefs":{"Monarch":{"xref_id":"0008510"}}}


id: GO:0140647
data:
  {"annotated_genes":["SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69689],"is_not":false,"summary":null,"term":"GO:0140647"}]},"cv_name":"biological_process","definition":"A electron transport chain in which one or more electron carriers operate to transfer electrons from donors to a cytochrome P450 protein or domain. Electron carriers operating in this chain include FAD-containing flavoproteins or domains, FMN domains, ferredoxins and cytochrome b5. The reduced cytochrome P450 functions as the terminal oxidase and participates in a wide range of biochemical pathways.","definition_xrefs":["PMID:16042601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transport chain","termid":"GO:0022900"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"P450-containing electron transport chain","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["Wikipedia:P450-containing_systems"],"synonyms":[{"name":"P450-containing system","type":"related"}],"termid":"GO:0140647","terms_by_termid":{"GO:0140647":null}}


id: SO:0000820
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a chloroplast.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chloroplast_sequence","termid":"SO:0000745"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloroplast_chromosome","synonyms":[{"name":"chloroplast chromosome","type":"exact"}],"termid":"SO:0000820"}


id: GO:0060531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquires specialized structural and functions of a neuroendocrine cell of the prostate gland acinus.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in prostate gland development","termid":"GO:0060742"},{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"prostate glandular acinus development","termid":"GO:0060525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroendocrine cell differentiation involved in prostate gland acinus development","termid":"GO:0060531"}


id: MONDO:1012517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"exercise induced metabolic myopathy, non-human animal","termid":"MONDO:1011805"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exercise induced metabolic myopathy, dog","secondary_identifiers":["OMIA:002140-9615"],"termid":"MONDO:1012517","xrefs":{"Monarch":{"xref_id":"1012517"}}}


id: MONDO:0060777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually solitary polypoid lesion that arises from the cervix. It usually affects women in their reproductive years. It is characterized by the presence of a connective tissue core and overlying epithelium.","definition_xrefs":["NCIT:C40200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical polyp","termid":"MONDO:0000751"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical fibroepithelial polyp","secondary_identifiers":["UMLS:C1516413","MEDGEN:308945"],"synonyms":[{"name":"Cervical fibroepithelial polyp","type":"exact"},{"name":"uterine cervix fibroepithelial polyp","type":"exact"}],"termid":"MONDO:0060777","xrefs":{"Monarch":{"xref_id":"0060777"}}}


id: MONDO:0600001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glutaminase deficiency is characterized by refractory seizures, respiratory failure, brain abnormalities and death in the neonatal period, though milder cases with spastic ataxia-dysarthria have also been reported. This condition is caused by mutations in the glutaminase (GLS) gene.","definition_xrefs":["PMID:30970188","PMID:30575854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glutamine metabolism","termid":"MONDO:0017352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"glutaminase deficiency","synonyms":[{"name":"glutaminase deficiency","type":"exact"}],"termid":"MONDO:0600001","xrefs":{"Monarch":{"xref_id":"0600001"}}}


id: SO:0001491
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The status of a whole genome sequence, with less than 1 error per 100,000 base pairs.","definition_xrefs":["DOI:10.1126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"whole_genome_sequence_status","termid":"SO:0001499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"finished_genome","synonyms":[{"name":"finished","type":"exact"},{"name":"finished genome","type":"exact"}],"termid":"SO:0001491"}


id: PBO:0076430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 6","termid":"PBO:0076430"}


id: GO:0032395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an MHC class II protein complex and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","ISBN:0781735149","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"MHC class II receptor activity","synonyms":[{"name":"T cell receptor activity","type":"related"},{"name":"alpha-beta T cell receptor activity","type":"related"},{"name":"gamma-delta T cell receptor activity","type":"related"}],"termid":"GO:0032395"}


id: PBO:0109316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair WLM domain metallopeptidase Wss1","termid":"PBO:0109316"}


id: GO:0033110
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the two lipid bilayers surrounding a Cvt vesicle, a vesicle that functions in the cytoplasm-to-vacuole targeting (Cvt) pathway.","definition_xrefs":["PMID:20065092","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"Cvt vesicle","termid":"GO:0033107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Cvt vesicle membrane","synonyms":[{"name":"cytoplasm to vacuole targeting vesicle membrane","type":"exact"},{"name":"cytoplasm-to-vacuole targeting vesicle membrane","type":"exact"}],"termid":"GO:0033110"}


id: PBO:0001002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine transporter Thi9","termid":"PBO:0001002"}


id: FYECO:0000329
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which formamide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ formamide","termid":"FYECO:0000329"}


id: PBO:0049233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRM5 antisense RNA 1","termid":"PBO:0049233"}


id: GO:0070441
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the Bruton tyrosine protein kinase Btk, which is implicated in mammalian X-linked immunodeficiencies, with the beta and gamma subunits of a heterotrimeric G protein.","definition_xrefs":["PMID:7972043","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"G-protein beta/gamma-Btk complex","synonyms":[{"name":"G protein complex (BTK, GNG1, GNG2)","type":"related"},{"name":"G protein complex (Btk, Gng2, Gnb1)","type":"related"}],"termid":"GO:0070441"}


id: PBO:0111929
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin ADOP ribosylation factor GTPase activating protein family","termid":"PBO:0111929"}


id: MONDO:0013007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of combined immunodeficiency due to Calcium release activated Ca2+ (CRAC) channel dysfunction characterized by recurrent infections, congenital myopathy, ectodermal dysplasia and anhydrosis.","definition_xrefs":["Orphanet:317428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency due to CRAC channel dysfunction","termid":"MONDO:0015695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to ORAI1 deficiency","secondary_identifiers":["OMIM:612782","MESH:C557826","icd11.foundation:677672007","DOID:0111976","MEDGEN:440578","GARD:10524","UMLS:C2748568"],"synonyms":[{"name":"CID due to ORAI1 deficiency","type":"exact"},{"name":"IMD9","type":"related"},{"name":"immune dysfunction with T-cell inactivation due to calcium entry defect 1","type":"related"},{"name":"immunodeficiency 9","type":"related"},{"name":"immunodeficiency type 9","type":"exact"}],"termid":"MONDO:0013007","xrefs":{"Monarch":{"xref_id":"0013007"}}}


id: PBO:0069343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 603, pseudogene","termid":"PBO:0069343"}


id: GO:0044273
data:
  {"annotated_genes":["SJAG_03316","SJAG_00903","SJAG_01612","SJAG_02247","SJAG_04858","SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[76984,102576,74019,78922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006751"},{"annotations":[114241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00903":null,"SJAG_01612":null,"SJAG_02247":null,"SJAG_03316":null,"SJAG_03671":null,"SJAG_04858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfur compound catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"sulfur catabolic process","type":"narrow"},{"name":"sulfur catabolism","type":"narrow"},{"name":"sulfur compound breakdown","type":"exact"},{"name":"sulfur compound catabolism","type":"exact"},{"name":"sulfur compound degradation","type":"exact"}],"termid":"GO:0044273","terms_by_termid":{"GO:0006751":null,"GO:0015938":null,"GO:0019450":null}}


id: GO:0014062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of serotonin.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"serotonin secretion","termid":"GO:0001820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of serotonin secretion","synonyms":[{"name":"regulation of serotonin release","type":"related"}],"termid":"GO:0014062"}


id: PBO:0041278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 4","termid":"PBO:0041278"}


id: GO:1901472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Golgi calcium ion export.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"regulates","term_name":"release of sequestered calcium ion into cytosol by Golgi","termid":"GO:0061454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of Golgi calcium ion export","termid":"GO:1901472"}


id: MONDO:1012147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, non-human animal","termid":"MONDO:1011713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, horse","secondary_identifiers":["OMIA:000621-9796"],"termid":"MONDO:1012147","xrefs":{"Monarch":{"xref_id":"1012147"}}}


id: PBO:0108599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-negatively_regulates_characteristic","termid":"PBO:0108599"}


id: GO:1904667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin protein ligase activity.","definition_xrefs":["GO_REF:0000059","PMID:26216882","GOC:dph","GOC:TermGenie","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ubiquitin-protein transferase activity","termid":"GO:0051444"},{"relation_name":"is_a","term_name":"regulation of ubiquitin protein ligase activity","termid":"GO:1904666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ubiquitin protein ligase activity","secondary_identifiers":["GO:0060564","GO:1904190"],"synonyms":[{"name":"down regulation of E3","type":"related"},{"name":"down regulation of protein ubiquitination activity","type":"exact"},{"name":"down regulation of ubiquitin ligase activity","type":"exact"},{"name":"down regulation of ubiquitin protein ligase activity","type":"exact"},{"name":"down-regulation of E3","type":"related"},{"name":"down-regulation of protein ubiquitination activity","type":"exact"},{"name":"down-regulation of ubiquitin ligase activity","type":"exact"},{"name":"down-regulation of ubiquitin protein ligase activity","type":"exact"},{"name":"downregulation of E3","type":"related"},{"name":"downregulation of protein ubiquitination activity","type":"exact"},{"name":"downregulation of ubiquitin ligase activity","type":"exact"},{"name":"downregulation of ubiquitin protein ligase activity","type":"exact"},{"name":"inhibition of E3","type":"related"},{"name":"inhibition of protein ubiquitination activity","type":"narrow"},{"name":"inhibition of ubiquitin ligase activity","type":"narrow"},{"name":"inhibition of ubiquitin protein ligase activity","type":"narrow"},{"name":"negative regulation of APC activity during mitotic cell cycle","type":"related"},{"name":"negative regulation of APC-Cdc20 complex activity","type":"narrow"},{"name":"negative regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"negative regulation of APC/C activity during mitotic cell cycle","type":"related"},{"name":"negative regulation of E3","type":"related"},{"name":"negative regulation of anaphase-promoting complex activity during mitotic cell cycle","type":"related"},{"name":"negative regulation of cyclosome activity during mitotic cell cycle","type":"related"},{"name":"negative regulation of mitotic anaphase-promoting complex activity","type":"related"},{"name":"negative regulation of protein ubiquitination activity","type":"exact"},{"name":"negative regulation of ubiquitin ligase activity","type":"exact"}],"termid":"GO:1904667"}


id: PBO:0090174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GEF, implicated in endosomal transport","termid":"PBO:0090174"}


id: MONDO:0021011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"choreatic disease","termid":"MONDO:0001595"},{"relation_name":"is_a","term_name":"NKX2-1 related choreoathetosis and congenital hypothyroidism with or without pulmonary dysfunction","termid":"MONDO:0100520"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary progressive chorea without dementia","secondary_identifiers":["OMIM:118700","MEDGEN:98278","UMLS:C0393584"],"synonyms":[{"name":"BCH","type":"related"},{"name":"BHC","type":"exact"},{"name":"chorea, benign hereditary","type":"exact"},{"name":"chorea, hereditary benign","type":"exact"},{"name":"hereditary progressive chorea without dementia","type":"exact"}],"termid":"MONDO:0021011","xrefs":{"Monarch":{"xref_id":"0021011"}}}


id: PBO:0113422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B12.6; contacts DNA; mutations affect transcription start site selection and fidelity of transcription; positively regulates ATG1 transcription as a key regulator of autophagy","termid":"PBO:0113422"}


id: PBO:0043253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 11","termid":"PBO:0043253"}


id: PBO:0042245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 7","termid":"PBO:0042245"}


id: GO:0033451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GUA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0060090","GO:0003723"],"is_obsolete":false,"name":"GUA codon-amino acid adaptor activity","synonyms":[{"name":"GTA codon-amino acid adaptor activity","type":"exact"},{"name":"valine tRNA","type":"related"}],"termid":"GO:0033451"}


id: SO:0001824
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe increase in cds length that inserts one or more codons into the coding sequence within an existing codon.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_insertion","termid":"SO:0001821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disruptive_inframe_insertion","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:disruptive_inframe_insertion","type":"exact"},{"name":"disruptive increase in CDS length","type":"exact"},{"name":"disruptive inframe insertion","type":"exact"},{"name":"snpEff:CODON_CHANGE_PLUS_CODON_INSERTION","type":"exact"}],"termid":"SO:0001824"}


id: PBO:0071887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 25","termid":"PBO:0071887"}


id: GO:0014051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gamma-aminobutyric acid by a cell or a tissue. The gamma-aminobutyric acid is the principal inhibitory neurotransmitter in the brain but is also found in several extraneural tissues.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-aminobutyric acid transport","termid":"GO:0015812"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gamma-aminobutyric acid secretion","synonyms":[{"name":"GABA secretion","type":"exact"}],"termid":"GO:0014051"}


id: PBO:0082005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 5 pseudogene 1","termid":"PBO:0082005"}


id: MONDO:0859237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-methylglutaconic aciduria, type VIIA","secondary_identifiers":["MEDGEN:1813022","DOID:0081133","UMLS:C5676967","OMIM:619835"],"termid":"MONDO:0859237","xrefs":{"Monarch":{"xref_id":"0859237"}}}


id: GO:2000597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of optic nerve formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of optic nerve formation","termid":"GO:2000595"},{"relation_name":"positively_regulates","term_name":"optic nerve formation","termid":"GO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of optic nerve formation","synonyms":[{"name":"positive regulation of CN II biosynthesis","type":"related"},{"name":"positive regulation of CN II formation","type":"related"}],"termid":"GO:2000597"}


id: GO:0110013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of aggregation involved in sorocarp development. Aggregation involved in sorocarp development is the process whose specific outcome is the progression of the aggregate over time, from its formation to the point when a slug is formed. Aggregate development begins in response to starvation and continues by the chemoattractant-mediated movement of cells toward each other. The aggregate is a multicellular structure that gives rise to the slug.","definition_xrefs":["PMID:28257811","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of aggregation involved in sorocarp development","termid":"GO:0060176"},{"relation_name":"positively_regulates","term_name":"aggregation involved in sorocarp development","termid":"GO:0031152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aggregation involved in sorocarp development","termid":"GO:0110013"}


id: PR:O74457
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-alpha-acetyltransferase 20 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23091:SF5","PRO:DNx","OMA:SCHPO04414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal acetyltransferase B complex catalytic subunit naa20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.12","secondary_identifiers":["UniProtKB:O74457"],"synonyms":[{"name":"NatB Nalpha terminal acetyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NatB complex subunit naa20 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NAA20","type":"exact"}],"termid":"PR:O74457"}


id: PBO:0053988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1305","termid":"PBO:0053988"}


id: PATO:0001331
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality inhering in a bearer by virtue of the bearer's having odour.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odor","termid":"PATO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorous","termid":"PATO:0001331"}


id: MONDO:0007612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gingival fibromatosis-progressive deafness syndrome is characterized by gingival fibromatosis associated with progressive sensorineural hearing loss. It has been described in two families (with at least 16 affected members spanning five generations in one of the families, and five affected members spanning three generations in the other family). It is transmitted as an autosomal dominant trait.","definition_xrefs":["Orphanet:2027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gingival fibromatosis-progressive deafness syndrome","secondary_identifiers":["MESH:C535886","OMIM:135550","UMLS:C1851112","MEDGEN:341928","SCTID:722449007","GARD:3056"],"synonyms":[{"name":"GFD","type":"related"},{"name":"Jones syndrome","type":"exact"},{"name":"familial gingival fibromatosis associated with progressive deafness","type":"related"},{"name":"fibromatosis, gingival, with progressive deafness","type":"related"},{"name":"gingival fibromatosis with progressive deafness","type":"related"},{"name":"gingival fibromatosis with sensorineural hearing loss","type":"related"}],"termid":"MONDO:0007612","xrefs":{"Monarch":{"xref_id":"0007612"}}}


id: PBO:0065497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMG3 pseudogene 2","termid":"PBO:0065497"}


id: PBO:0058440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5004","termid":"PBO:0058440"}


id: MONDO:0031028
data:
  {"annotated_genes":["SJAG_00567","SJAG_03634","SJAG_03278"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87200,87201,87202],"is_not":false,"summary":null,"term":"MONDO:0031028"}]},"cv_name":"mondo","definition":"A developmental and epileptic encephalopathy characterized by onset of seizures and pituitary insufficiency in the first weeks or months of life with profoundly impaired development that has material basis in homozygous or compound heterozygous mutation in the HID1 gene on chromosome 17q25.","definition_xrefs":["DOID:0070391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00567":null,"SJAG_03278":null,"SJAG_03634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 105 with hypopituitarism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1823963","OMIM:619983","UMLS:C5774190"],"synonyms":[{"name":"DEE105","type":"exact"},{"name":"developmental and epileptic encephalopathy 105 with hypopituitarism","type":"exact"}],"termid":"MONDO:0031028","terms_by_termid":{"MONDO:0031028":null},"xrefs":{"Monarch":{"xref_id":"0031028"}}}


id: PBO:0052715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 7","termid":"PBO:0052715"}


id: GO:0034173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 11 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 11 signaling pathway","termid":"GO:0034171"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 11 signaling pathway","termid":"GO:0034170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 11 signaling pathway","synonyms":[{"name":"positive regulation of TLR11 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 11 signalling pathway","type":"exact"}],"termid":"GO:0034173"}


id: PR:Q9C1W5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02627","PANTHER:PTHR12388:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.10","secondary_identifiers":["UniProtKB:Q9C1W5"],"synonyms":[{"name":"Spom972h-PAM16","type":"exact"},{"name":"presequence translocated-associated motor subunit pam16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C1W5"}


id: PR:P87242
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An HD domain-containing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04312","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HD domain-containing protein C4G3.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.17","secondary_identifiers":["UniProtKB:P87242"],"synonyms":[{"name":"Spom972h-HDDC2","type":"exact"}],"termid":"PR:P87242"}


id: MONDO:0013145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Brugada syndrome in which the cause of the disease is a mutation in the KCNE3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Brugada syndrome","termid":"MONDO:0015263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Brugada syndrome 6","secondary_identifiers":["UMLS:C2751089","MESH:C567735","MEDGEN:413473","OMIM:613119","DOID:0110223","GARD:15619"],"synonyms":[{"name":"BRGDA6","type":"exact"},{"name":"Brugada syndrome 6","type":"exact"},{"name":"Brugada syndrome caused by mutation in KCNE3","type":"exact"},{"name":"Brugada syndrome type 6","type":"exact"},{"name":"KCNE3 Brugada syndrome","type":"exact"}],"termid":"MONDO:0013145","xrefs":{"Monarch":{"xref_id":"0013145"}}}


id: PBO:0086009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cytosol; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0086009"}


id: MONDO:0014103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the IL17RD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 18 with or without anosmia","secondary_identifiers":["DOID:0090076","GARD:15929","ICD10CM:E23.0","UMLS:C3808975","OMIM:615267","MEDGEN:815305"],"synonyms":[{"name":"HH18","type":"related"},{"name":"IL17RD hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 18 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism 18 with or without anosmia, Autosomal recessive, Autosomal dominant, Digenic dominant","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in IL17RD","type":"exact"}],"termid":"MONDO:0014103","xrefs":{"Monarch":{"xref_id":"0014103"}}}


id: MONDO:0002076
data:
  {"annotated_genes":["SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008259"}]},"cv_name":"mondo","definition":"Abnormal presence of air in the pleural cavity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleural disorder","termid":"MONDO:0002037"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02231":null},"genotype_count":0,"is_obsolete":false,"name":"pneumothorax","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1946559257","MESH:D011030","HP:0002107","UMLS:C0032326","ICD9:512.8","MEDGEN:19365","NCIT:C38006","SCTID:36118008","DOID:1673"],"synonyms":[{"name":"pneumothorax","type":"exact"},{"name":"pneumothorax (disease)","type":"exact"}],"termid":"MONDO:0002076","terms_by_termid":{"MONDO:0008259":null},"xrefs":{"Monarch":{"xref_id":"0002076"}}}


id: FYPO:0006077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 9 of histone H3 occurs to a greater extent than normal at ribosomal DNA.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at rDNA during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at rDNA during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at rDNA during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 methylation at ribosomal DNA during vegetative growth","type":"exact"},{"name":"increased histone H3K9 methylation at rDNA during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at rDNA during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at rDNA during vegetative growth","type":"exact"}],"termid":"FYPO:0006077"}


id: GO:0018496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,6-dihydroxycyclohexane-1-carboxyl-CoA = 2 H+ + 2 e- + 6-oxo-2-hydroxycyclohexane-1-carboxyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,6-dihydroxycyclohexane-1-carboxyl-CoA dehydrogenase activity (obsolete GO:0018496)","termid":"GO:0018496"}


id: PR:O14200
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pxa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PXA domain protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.07c","synonyms":[{"name":"Spom972h-pxa1","type":"exact"}],"termid":"PR:O14200"}


id: PBO:0031215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_oxidation_during_vegetative_growth","termid":"PBO:0031215"}


id: PBO:0085237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis/trans-isomerase; activator of the phosphotyrosyl phosphatase activity of PP2A; involved in G1 phase progression, microtubule dynamics, bud morphogenesis and DNA repair; required for rapid reduction of Sgs1p levels in response to rapamycin; subunit of the Tap42p-Sit4p-Rrd1p complex; protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085237"}


id: PBO:0055301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2728","termid":"PBO:0055301"}


id: MONDO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the rectum. Representative examples of benign neoplasms include lipoma and leiomyoma. Representative examples of malignant neoplasms include carcinoma, lymphoma, and sarcoma. Rectal adenomas always exhibit epithelial dysplasia and are considered premalignant neoplasms.","definition_xrefs":["NCIT:C3350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal disorder","termid":"MONDO:0001593"},{"relation_name":"is_a","term_name":"colorectal neoplasm","termid":"MONDO:0005335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal neoplasm","secondary_identifiers":["MEDGEN:11148","MESH:D012004","DOID:1984","SCTID:126847008","UMLS:C0034885"],"synonyms":[{"name":"neoplasm of rectum","type":"exact"},{"name":"neoplasm of the rectum","type":"exact"},{"name":"rectal neoplasm","type":"exact"},{"name":"rectal tumor","type":"exact"},{"name":"rectal tumour","type":"exact"},{"name":"rectum neoplasm","type":"exact"},{"name":"rectum neoplasm (disease)","type":"exact"},{"name":"rectum tumor","type":"exact"},{"name":"rectum tumour","type":"exact"},{"name":"tumor of rectum","type":"exact"},{"name":"tumor of the rectum","type":"exact"},{"name":"tumour of rectum","type":"exact"},{"name":"tumour of the rectum","type":"exact"}],"termid":"MONDO:0002165","xrefs":{"Monarch":{"xref_id":"0002165"}}}


id: MONDO:0017856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete ARX-related epileptic encephalopathy (obsolete MONDO:0015921)","termid":"MONDO:0015921"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked spasticity-intellectual disability-epilepsy syndrome","secondary_identifiers":["MEDGEN:1376165","Orphanet:3175","UMLS:C4510949","GARD:16622"],"termid":"MONDO:0017856","xrefs":{"Monarch":{"xref_id":"0017856"}}}


id: GO:0051470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ectoine across a membrane by means of some agent such as a transporter or a pore. Ectoine (1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid) is a tetrahydropyrimidine commonly synthesized by halophilic bacteria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"ectoine transmembrane transport","synonyms":[{"name":"ectoine transport","type":"related"}],"termid":"GO:0051470"}


id: MONDO:1012408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal hamartomatous polyposis and ganglioneuromatosis, non-human animal","termid":"MONDO:1011820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal hamartomatous polyposis and ganglioneuromatosis, dog","secondary_identifiers":["OMIA:001515-9615"],"termid":"MONDO:1012408","xrefs":{"Monarch":{"xref_id":"1012408"}}}


id: PBO:0059963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 8","termid":"PBO:0059963"}


id: PBO:0070302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 8","termid":"PBO:0070302"}


id: PBO:0069525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 794, pseudogene","termid":"PBO:0069525"}


id: PBO:0073666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIPA1L1 antisense RNA 1","termid":"PBO:0073666"}


id: GO:0070563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the vitamin D receptor signaling pathway activity.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin D receptor signaling pathway","termid":"GO:0070562"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"vitamin D receptor signaling pathway","termid":"GO:0070561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of vitamin D receptor signaling pathway","synonyms":[{"name":"down regulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"down-regulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"downregulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"inhibition of vitamin D receptor signaling pathway","type":"narrow"},{"name":"negative regulation of VDR signaling pathway","type":"exact"},{"name":"negative regulation of VDR signalling pathway","type":"exact"},{"name":"negative regulation vitamin D receptor signalling pathway","type":"exact"}],"termid":"GO:0070563"}


id: PBO:0082038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-deoxyglucose-6-phosphate phosphatase; member of a family of low molecular weight phosphatases; confers 2-deoxyglucose resistance when overexpressed; DOG1 has a paralog, DOG2, that arose from a single-locus duplication; the last half of DOG1 and DOG2 are subject to gene conversions among S. cerevisiae, S. paradoxus, and S. mikatae","termid":"PBO:0082038"}


id: PBO:0081970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZRANB2 divergent transcript","termid":"PBO:0081970"}


id: GO:0045568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 2.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of TRAIL receptor 2 biosynthetic process (obsolete GO:0045568)","synonyms":[{"name":"activation of TRAIL receptor 2 biosynthetic process","type":"narrow"},{"name":"positive regulation of TRAIL receptor 2 anabolism","type":"exact"},{"name":"positive regulation of TRAIL receptor 2 biosynthesis","type":"exact"},{"name":"positive regulation of TRAIL receptor 2 formation","type":"exact"},{"name":"positive regulation of TRAIL receptor 2 synthesis","type":"exact"},{"name":"stimulation of TRAIL receptor 2 biosynthetic process","type":"narrow"},{"name":"up regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"up-regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"upregulation of TRAIL receptor 2 biosynthetic process","type":"exact"}],"termid":"GO:0045568"}


id: GO:0072596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in a chloroplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"},{"relation_name":"is_a","term_name":"protein localization to chloroplast","termid":"GO:0072598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to chloroplast","synonyms":[{"name":"establishment of protein localisation to chloroplast","type":"exact"}],"termid":"GO:0072596"}


id: PBO:0048982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain containing 8","termid":"PBO:0048982"}


id: PBO:0011111
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion library version 2. has incorrect strain","termid":"PBO:0011111"}


id: GO:1990842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis in the embryo or fetus during pregnancy.","definition_xrefs":["PMID:22738222"],"gene_count":0,"genotype_count":0,"name":"obsolete response to prenatal stress (obsolete GO:1990842)","synonyms":[{"name":"response to PNS","type":"exact"}],"termid":"GO:1990842"}


id: PBO:0084156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity sulfate permease; sulfate uptake is mediated by specific sulfate transporters Sul1p and Sul2p, which control the concentration of endogenous activated sulfate intermediates","termid":"PBO:0084156"}


id: FYPO:0006838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which linear element maturation is abnormal. Linear element maturation is the close association of assembled LinE complexes with chromatin during meiotic prophase to form mature linear elements.","definition_xrefs":["PomBase:mah","PMID:30640914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal linear element assembly","termid":"FYPO:0000900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal linear element maturation","synonyms":[{"name":"LinE chromosome loading","type":"exact"},{"name":"LinE focus formation","type":"exact"}],"termid":"FYPO:0006838"}


id: PBO:0083556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene HUL4/YJR036C; deletion mutant has decreased spore survival in Drosophila feces","termid":"PBO:0083556"}


id: MONDO:0017289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pleuropulmonary blastoma","termid":"MONDO:0011014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fetal lung interstitial tumor","secondary_identifiers":["MEDGEN:1830091","NCIT:C190105","GARD:21118","Orphanet:284362","UMLS:C5679952"],"synonyms":[{"name":"FLIT","type":"exact"},{"name":"flit","type":"exact"},{"name":"immature interstitial mesenchymal tumor","type":"exact"},{"name":"immature interstitial mesenchymal tumour","type":"exact"}],"termid":"MONDO:0017289","xrefs":{"Monarch":{"xref_id":"0017289"}}}


id: GO:0052850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dihydrocurcumin + NADP+ = curcumin + H+ + NADPH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrocurcumin (NADP+) reductase activity (obsolete GO:0052850)","synonyms":[{"name":"NADPH-dependent dihydrocurcumin reductase activity","type":"exact"},{"name":"dihydrocurcumin reductase (NADPH) activity","type":"exact"}],"termid":"GO:0052850"}


id: PBO:0072697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN and SH3 domain containing 2","termid":"PBO:0072697"}


id: PBO:0077560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 267","termid":"PBO:0077560"}


id: PBO:0091659
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric Reductase in Pombe","termid":"PBO:0091659"}


id: PATO:0002403
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Affecting all regions without specificity of distribution.","definition_xrefs":["PATOC:MPTH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"generalized","synonyms":[{"name":"generalised","type":"exact"}],"termid":"PATO:0002403"}


id: PR:Q9Y7I8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zuo1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7I8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zuotin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.01c","synonyms":[{"name":"DnaJ-related protein zuo1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"J protein zuo1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-zuo1","type":"exact"},{"name":"ribosome-associated complex subunit zuo1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7I8"}


id: GO:0031028
data:
  {"annotated_genes":["SJAG_03353","SJAG_03681","SJAG_00078","SJAG_01386","SJAG_01188","SJAG_00229","SJAG_04468","SJAG_00600","SJAG_04455","SJAG_03508","SJAG_00883","SJAG_06270","SJAG_04943","SJAG_03048","SJAG_04597","SJAG_03376","SJAG_01805","SJAG_00526","SJAG_00082","SJAG_01464","SJAG_03936","SJAG_04776","SJAG_03342","SJAG_02514","SJAG_02169","SJAG_01790","SJAG_03631","SJAG_03592","SJAG_02232"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74528,89583,94755,101262,106702,107456],"is_not":false,"summary":null,"term":"GO:0031028"},{"annotations":[92072,105361,91067,107546,101592,93270,107851,116205,93186,95972,110477,93804,73126,99914,107411],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031030"},{"annotations":[90344,94149,102700,87878,110833],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031031"},{"annotations":[113674,104815,90306],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031029"}]},"cv_name":"biological_process","definition":"The series of molecular signals, mediated by the small GTPase Ras, that results in the initiation of contraction of the contractile ring, at the beginning of cytokinesis and cell division by septum formation. The pathway coordinates chromosome segregation with mitotic exit and cytokinesis.","definition_xrefs":["PMID:16775007","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00082":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00883":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02232":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03376":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03936":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"septation initiation signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SIN","type":"exact"},{"name":"septation initiation network","type":"exact"},{"name":"septation initiation signaling cascade","type":"related"},{"name":"septation initiation signalling","type":"exact"}],"termid":"GO:0031028","terms_by_termid":{"GO:0031028":null,"GO:0031029":null,"GO:0031030":null,"GO:0031031":null}}


id: MOD:00172
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-alanyl-glycosylphosphatidylinositolethanolamine.","definition_xrefs":["PubMed:7682556","PubMed:7744038","RESID:AA0163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylphosphatidylinositolated residue","termid":"MOD:00818"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:00764","MOD:01155"],"is_obsolete":false,"name":"N-alanyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPIAla","type":"exact"},{"name":"LIPID GPI-anchor amidated alanine","type":"exact"},{"name":"N-alanyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"MOD:00172"}


id: PBO:0083145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF DAL81/YIR023W","termid":"PBO:0083145"}


id: PBO:0058721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6849","termid":"PBO:0058721"}


id: PBO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAPADILINO syndrome","termid":"PBO:0002375"}


id: FYPO:0000670
data:
  {"alleles_by_uniquename":{"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119704,119702,119703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000671"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is abnormal. Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["GO:0051306","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"part_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":3,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000641","FYPO:0001320","FYPO:0000337","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid separation","references_by_uniquename":{"PMID:24184107":null},"single_locus_annotated_genes":["SJAG_03449"],"single_locus_genotype_uniquenames":["man1delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal mitotic chromosome separation","type":"exact"},{"name":"abnormal sister chromatid separation during mitosis","type":"exact"},{"name":"abnormal sister chromatid separation during mitotic cell cycle","type":"related"},{"name":"abnormal sister chromatid separation during vegetative growth","type":"exact"},{"name":"aneuploidy","type":"related"},{"name":"mitotic chromosome missegregation","type":"related"}],"termid":"FYPO:0000670","terms_by_termid":{"FYPO:0000671":null}}


id: PBO:0001128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanosine-diphosphatase Gda1","termid":"PBO:0001128"}


id: MONDO:0023007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disorder, characterized by under-development of bone marrow and neurological disorders such as weakness on one side of the body, agenesis of corpus callosum and hydrocephalus.","definition_xrefs":["PMID:2264478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"bone marrow disorder","termid":"MONDO:0003225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"Drachtman Weinblatt Sitarz syndrome","secondary_identifiers":["MEDGEN:419292","UMLS:C2930947","GARD:1913","MESH:C535603"],"synonyms":[{"name":"Drachtman Weinblatt Sitarz syndrome","type":"exact"},{"name":"marrow hypoplasia associated with congenital neurologic anomalies","type":"related"}],"termid":"MONDO:0023007","xrefs":{"Monarch":{"xref_id":"0023007"}}}


id: PBO:0074860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 46","termid":"PBO:0074860"}


id: PBO:0078343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 9-1","termid":"PBO:0078343"}


id: MONDO:0022504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis spinal muscular atrophy","termid":"MONDO:0022504","xrefs":{"Monarch":{"xref_id":"0022504"}}}


id: GO:0150060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular amylin, or another ligand, combining with an amylin receptor 2 (AMY2), a G protein-coupled receptor complex, on the surface of the target cell. The AMY2 signaling pathway can also be initiated by adrenomedullin (AM/ADM).","definition_xrefs":["GOC:aruk","GOC:bc","PMID:22500019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor signaling pathway","termid":"GO:0097647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"amylin receptor 2 signaling pathway","synonyms":[{"name":"AMY2 signaling pathway","type":"exact"}],"termid":"GO:0150060"}


id: PBO:0060552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroblastoma associated transcript 1","termid":"PBO:0060552"}


id: PBO:0079896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 5","termid":"PBO:0079896"}


id: MOD:00723
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to either N2-acetyl-L-lysine, or N6-acetyl-L-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylated residue","termid":"MOD:00408"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetylated L-lysine","synonyms":[{"name":"NAcLys","type":"exact"}],"termid":"MOD:00723"}


id: GO:0034007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + H2O = (S)-linalool + diphosphate.","definition_xrefs":["EC:4.2.3.25","RHEA:24116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"S-linalool synthase activity","secondary_identifiers":["KEGG_REACTION:R07631","MetaCyc:4.2.3.25-RXN"],"synonyms":[{"name":"3S-linalool synthase activity","type":"related"},{"name":"LIS","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [(3S)-linalool-forming] activity","type":"related"}],"termid":"GO:0034007"}


id: PBO:0074028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 16","termid":"PBO:0074028"}


id: MONDO:0006822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Klatskin's tumor (obsolete MONDO:0006822)","termid":"MONDO:0006822","xrefs":{"Monarch":{"xref_id":"0006822"}}}


id: GO:0031831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5B serotonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 5B serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 5B receptor binding","type":"exact"},{"name":"type 5B serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031831"}


id: GO:0099096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The giant, cup-shaped axon terminal of a vestibular afferent neuron, serving as a post-synaptic contact to a type I hair cell.","definition_xrefs":["PMID:10706428","PMID:25355208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon terminus","termid":"GO:0043679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vestibular calyx terminal","termid":"GO:0099096"}


id: GO:0080011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3-epoxysqualene = baruol. Baruol is also known as D:B-Friedo-Baccharan-5,21-dien-3-ol.","definition_xrefs":["PMID:17705488","RHEA:31987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"baruol synthase activity","secondary_identifiers":["MetaCyc:RXN-9685","EC:5.4.99.57"],"termid":"GO:0080011"}


id: SO:1000057
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The changed codon has the same translation product as the original codon.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000057 sequence_variant_causing_synonymous_codon_change_in_transcript (obsolete SO:1000057)","synonyms":[{"name":"mutation causing synonymous codon change in transcript","type":"related"},{"name":"sequence variant causing synonymous codon change in transcript","type":"exact"}],"termid":"SO:1000057"}


id: PBO:0048986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC-rich promoter binding protein 1","termid":"PBO:0048986"}


id: GO:0009532
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proteinaceous ground substance of plastids.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid stroma","termid":"GO:0009532"}


id: GO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the instar larva or pupa over time, from its formation to the mature structure. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"instar larval or pupal development","termid":"GO:0002165"}


id: MONDO:0060564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"HELIX syndrome","secondary_identifiers":["OMIM:617671","MEDGEN:1621482","GARD:17967","Orphanet:528105","UMLS:C4522164"],"synonyms":[{"name":"HELIX","type":"exact"},{"name":"HELIX syndrome","type":"exact"},{"name":"hypohidrosis, electrolyte imbalance, lacrimal gland dysfunction, ichthyosis, and xerostomia","type":"related"},{"name":"hypohidrosis-electrolyte imbalance-lacrimal gland dysfunction-ichthyosis-xerostomia syndrome","type":"exact"}],"termid":"MONDO:0060564","xrefs":{"Monarch":{"xref_id":"0060564"}}}


id: PBO:0077894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taperin","termid":"PBO:0077894"}


id: GO:0035495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of disassembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"SNARE complex disassembly","termid":"GO:0035494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of SNARE complex disassembly","termid":"GO:0035495"}


id: PBO:0070967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 5","termid":"PBO:0070967"}


id: GO:0110015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of elastin catabolism, the chemical reactions and pathways resulting in the breakdown of elastin.","definition_xrefs":["GOC:rph","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"regulation of elastin catabolic process","termid":"GO:0060310"},{"relation_name":"is_a","term_name":"positive regulation of glycoprotein metabolic process","termid":"GO:1903020"},{"relation_name":"positively_regulates","term_name":"elastin catabolic process","termid":"GO:0060309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"positive regulation of elastin catabolic process","termid":"GO:0110015"}


id: PBO:0070761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 17","termid":"PBO:0070761"}


id: PR:Q9HDX8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An L-gulonolactone oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-arabinono-1,4-lactone oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.12c","secondary_identifiers":["UniProtKB:Q9HDX8"],"synonyms":[{"name":"ALO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"L-galactono-gamma-lactone oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAPB1A10.12c","type":"related"},{"name":"Spom972h-Gulo","type":"exact"}],"termid":"PR:Q9HDX8"}


id: GO:0003103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of diuresis. Diuresis is the process of renal water excretion.","definition_xrefs":["GOC:mtg_cardio"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of diuresis (obsolete GO:0003103)","synonyms":[{"name":"positive regulation of diuresis","type":"exact"}],"termid":"GO:0003103"}


id: MONDO:0003614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign neoplasm characterized by the presence of smooth muscle cells growing within veins.","definition_xrefs":["NCIT:C4518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyomatosis","termid":"MONDO:0003295"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intravenous leiomyomatosis","secondary_identifiers":["ICD9:238.1","SCTID:254883003","UMLS:C0346200","DOID:5729","MEDGEN:83417"],"synonyms":[{"name":"intravenous leiomyomatosis","type":"exact"}],"termid":"MONDO:0003614","xrefs":{"Monarch":{"xref_id":"0003614"}}}


id: PBO:0079280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase","termid":"PBO:0079280"}


id: PBO:0028525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9K14_acetylation","termid":"PBO:0028525"}


id: GO:1904034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of t-SNARE clustering.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22528485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of t-SNARE clustering","termid":"GO:1904032"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to membrane","termid":"GO:1905477"},{"relation_name":"positively_regulates","term_name":"t-SNARE clustering","termid":"GO:1990656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of t-SNARE clustering","synonyms":[{"name":"activation of t-SNARE clustering","type":"narrow"},{"name":"up regulation of t-SNARE clustering","type":"exact"},{"name":"up-regulation of t-SNARE clustering","type":"exact"},{"name":"upregulation of t-SNARE clustering","type":"exact"}],"termid":"GO:1904034"}


id: MONDO:0008578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toe, rotated fifth","secondary_identifiers":["MEDGEN:348254","OMIM:189150","UMLS:C1861060"],"synonyms":[{"name":"toe, rotated fifth","type":"exact"}],"termid":"MONDO:0008578","xrefs":{"Monarch":{"xref_id":"0008578"}}}


id: GO:0008656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the rate of proteolysis catalyzed by a cysteine-type endopeptidase involved in the apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activator activity involved in apoptotic process","termid":"GO:0016505"},{"relation_name":"is_a","term_name":"cysteine-type endopeptidase regulator activity involved in apoptotic process","termid":"GO:0043028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"positively_regulates","termid":"GO:0140096"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"positively_regulates","termid":"GO:0016787"},{"rel_name":"positively_regulates","termid":"GO:0008233"},{"rel_name":"regulates","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"positively_regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0008233","GO:0098772","GO:0003824","GO:0140096","GO:0140677","GO:0016787","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"cysteine-type endopeptidase activator activity involved in apoptotic process","secondary_identifiers":["Reactome:R-HSA-449073","Reactome:R-HSA-205117"],"synonyms":[{"name":"caspase activator activity","type":"broad"}],"termid":"GO:0008656"}


id: PBO:0086749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; predicted to contain a transmembrane domain; not an essential gene; YNL095C has a paralog, ECM3, that arose from the whole genome duplication","termid":"PBO:0086749"}


id: FYPO:0004263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after entering stationary phase, under conditions of nitrogen limitation, such as in a medium that contains a low level of NH4Cl and no other nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal viability in stationary phase","termid":"FYPO:0001310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal viability in stationary phase during nitrogen limitation","synonyms":[{"name":"normal cell population viability in stationary phase during nitrogen limitation","type":"exact"}],"termid":"FYPO:0004263"}


id: GO:0003997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2,3-saturated acyl-CoA + O2 = a (2E)-enoyl-CoA + H2O2.","definition_xrefs":["RHEA:38959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"acyl-CoA oxidase activity","secondary_identifiers":["EC:1.3.3.6","MetaCyc:RXN-11026","Reactome:R-HSA-192335","Reactome:R-HSA-193369","Reactome:R-HSA-2066787","Reactome:R-HSA-390256"],"synonyms":[{"name":"acyl coenzyme A oxidase activity","type":"related"},{"name":"acyl-CoA:oxygen 2-oxidoreductase activity","type":"related"},{"name":"fatty acyl-CoA oxidase activity","type":"related"},{"name":"fatty acyl-coenzyme A oxidase activity","type":"related"}],"termid":"GO:0003997"}


id: PBO:0114282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, F-box","termid":"PBO:0114282"}


id: GO:0009328
data:
  {"annotated_genes":["SJAG_02206","SJAG_03626"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77925,79242],"is_not":false,"summary":null,"term":"GO:0009328"}]},"cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the ligation of phenylalanine to tRNA(Phe), forming L-phenylalanyl-tRNA(Phe).","definition_xrefs":["PMID:20223217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02206":null,"SJAG_03626":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"phenylalanine-tRNA ligase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0009328","terms_by_termid":{"GO:0009328":null}}


id: PATO:0001074
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001074 absolute impulse (obsolete PATO:0001074)","termid":"PATO:0001074"}


id: PBO:0108614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 15","termid":"PBO:0108614"}


id: PBO:0113227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb-related transcription factor; involved in regulating basal and induced expression of genes of the purine and histidine biosynthesis pathways; controls cellular ATP levels; also involved in regulation of meiotic recombination at specific genes","termid":"PBO:0113227"}


id: GO:0004789
data:
  {"annotated_genes":["SJAG_00381"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77503],"is_not":false,"summary":null,"term":"GO:0004789"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-amino-2-methyl-5-diphosphomethylpyrimidine + 4-methyl-5-(2-phosphoethyl)-thiazole + H+ = diphosphate + thiamine phosphate.","definition_xrefs":["RHEA:22328","EC:2.5.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"thiamine-phosphate diphosphorylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R03223","MetaCyc:THI-P-SYN-RXN"],"synonyms":[{"name":"2-methyl-4-amino-5-hydroxymethylpyrimidine-diphosphate:4-methyl-5-(2-phosphoethyl)thiazole 2-methyl-4-aminopyrimidine-5-methenyltransferase activity","type":"related"},{"name":"TMP diphosphorylase activity","type":"related"},{"name":"TMP pyrophosphorylase activity","type":"related"},{"name":"TMP-PPase activity","type":"related"},{"name":"thiamin-phosphate diphosphorylase activity","type":"exact"},{"name":"thiamin-phosphate pyrophosphorylase activity","type":"exact"},{"name":"thiamine monophosphate pyrophosphorylase activity","type":"related"},{"name":"thiamine phosphate pyrophosphorylase activity","type":"related"},{"name":"thiamine-phosphate pyrophosphorylase activity","type":"exact"},{"name":"thiamine-phosphate synthase activity","type":"related"}],"termid":"GO:0004789","terms_by_termid":{"GO:0004789":null}}


id: PBO:0050104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 14","termid":"PBO:0050104"}


id: PBO:0029264
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_binding_during_cellular_response_to_ionizing_radiation","termid":"PBO:0029264"}


id: MONDO:0004188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spindle cell melanoma that involves the iris.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell intraocular melanoma","termid":"MONDO:0003744"},{"relation_name":"is_a","term_name":"iris melanoma","termid":"MONDO:0004064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"iris spindle cell melanoma","secondary_identifiers":["DOID:7328","MEDGEN:232672","UMLS:C1334287","NCIT:C6098"],"synonyms":[{"name":"iris spindle cell melanoma","type":"exact"},{"name":"spindle cell melanoma of iris","type":"exact"},{"name":"spindle cell melanoma of the iris","type":"exact"}],"termid":"MONDO:0004188","xrefs":{"Monarch":{"xref_id":"0004188"}}}


id: GO:2000408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T cell extravasation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular extravasation","termid":"GO:0002692"},{"relation_name":"is_a","term_name":"negative regulation of T cell migration","termid":"GO:2000405"},{"relation_name":"is_a","term_name":"regulation of T cell extravasation","termid":"GO:2000407"},{"relation_name":"negatively_regulates","term_name":"T cell extravasation","termid":"GO:0072683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell extravasation","synonyms":[{"name":"negative regulation of T lymphocyte extravasation","type":"exact"},{"name":"negative regulation of T-cell extravasation","type":"exact"},{"name":"negative regulation of T-lymphocyte extravasation","type":"exact"}],"termid":"GO:2000408"}


id: GO:0044739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism positively regulates the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of acid-sensing ion channel in another organism (obsolete GO:0044739)","synonyms":[{"name":"positive regulation of ASIC channel in other organism","type":"exact"},{"name":"positive regulation of acid-sensing ion channel in other organism","type":"exact"}],"termid":"GO:0044739"}


id: PBO:0017613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination endonuclease Rec12","termid":"PBO:0017613"}


id: SO:0001126
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of five consecutive residues and two hydrogen bonds in which: residue(i) is Serine (S) or Threonine (T), the side-chain O of residue(i) is H-bonded to the main-chain NH of residue(i+2) or (i+3) , the main-chain CO group of residue(i) is H-bonded to the main-chain NH of residue(i+3) or (i+4).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"serine_threonine_motif","secondary_identifiers":["BS:00229"],"synonyms":[{"name":"serine/threonine motif","type":"exact"},{"name":"st motif","type":"exact"},{"name":"st_motif","type":"exact"}],"termid":"SO:0001126"}


id: GO:0102992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + 2-methylbutyronitrile + NADPH + O2 = H2O + NADP + 2-hydroxy-2-methylbutyronitrile.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-methylbutyronitrile hydroxylase activity (obsolete GO:0102992)","termid":"GO:0102992"}


id: PBO:0082954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic proteinase A (Pep4p) inhibitor; dependent on Pbs2p and Hog1p protein kinases for osmotic induction; intrinsically unstructured, N-terminal half becomes ordered in the active site of proteinase A upon contact","termid":"PBO:0082954"}


id: FYPO:0006737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the proportion of cells in the population remains viable after entering stationary phase does not change in the presence of alpha-hibitakanine. Normally, wild-type cell populations survive longer in the presence of alpha-hibitakanine than in its absence.","definition_xrefs":["PMID:29900664","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"stationary phase viability unaffected by alpha-hibitakanine","synonyms":[{"name":"chronological lifespan unaffected by alpha-hibitakanine","type":"related"},{"name":"loss of chronological lifespan extension by alpha-hibitakanine","type":"related"},{"name":"loss of stationary phase viability extension in presence of alpha-hibitakanine","type":"exact"}],"termid":"FYPO:0006737"}


id: GO:0120331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of an endothelial tube.","definition_xrefs":["PMID:23239824","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"endothelial tube morphogenesis","termid":"GO:0061154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial tube formation","termid":"GO:0120331"}


id: GO:0060220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a photoreceptor cell in a camera-type eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell fate commitment","termid":"GO:0042706"},{"relation_name":"part_of","term_name":"camera-type eye photoreceptor cell differentiation","termid":"GO:0060219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"}


id: PBO:0028284
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_Ku-0063794","termid":"PBO:0028284"}


id: MONDO:0021932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trypanosomiasis caused by infection by Trypanosoma brucei gambiense.","definition_xrefs":["NCIT:C35084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human African trypanosomiasis","termid":"MONDO:0005459"},{"relation_name":"is_a","term_name":"skin infection","termid":"MONDO:0021201"},{"relation_name":"is_a","term_name":"parasitic skin disorder","termid":"MONDO:0024610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"infection by Trypanosoma gambiense","secondary_identifiers":["MEDGEN:11933","SCTID:75809006","UMLS:C0041232","ICD9:086.3"],"synonyms":[{"name":"Gambian sleeping sickness","type":"related"},{"name":"Gambian trypanosomiasis","type":"related"},{"name":"Gambiense trypanosomiasis infection","type":"related"},{"name":"Infection by Trypanosoma gambiense","type":"exact"},{"name":"Infection caused by Trypanosoma gambiense","type":"related"},{"name":"chronic sleeping sickness","type":"related"}],"termid":"MONDO:0021932","xrefs":{"Monarch":{"xref_id":"0021932"}}}


id: FYPO:0003908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from antisense transcription of genes that are expressed in response to stress measured in a cell is greater than normal. All stress-responsive genes, or a specific subset of such genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased antisense RNA level","termid":"FYPO:0003557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased stress response gene antisense RNA level","synonyms":[{"name":"increased antisense RNA level at stress response genes","type":"related"},{"name":"increased level of stress response gene antisense transcripts","type":"exact"},{"name":"increased stress response gene antisense RNA accumulation","type":"related"},{"name":"increased stress response gene antisense RNA level during mitotic cell cycle","type":"related"},{"name":"increased stress response gene antisense RNA level during vegetative growth","type":"exact"},{"name":"increased stress response gene antisense transcript level","type":"exact"}],"termid":"FYPO:0003908"}


id: PBO:0088810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, LARP1 family Slr1","termid":"PBO:0088810"}


id: GO:1905410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic cohesin unloading.","definition_xrefs":["PMID:26687354","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic cohesin unloading (obsolete GO:1905410)","termid":"GO:1905410"}


id: GO:0033838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a flavonol 3-O-beta-D-glucoside = UDP + a flavonol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"flavonol-3-O-glucoside glucosyltransferase activity","secondary_identifiers":["RHEA:18893","MetaCyc:2.4.1.239-RXN"],"synonyms":[{"name":"UDP-glucose:flavonol-3-O-glucoside 2''-O-beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0033838"}


id: PR:000050595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A microtubule protein alp7 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Ser-50, Ser-51, Thr-100, Thr-116, and Thr-131 of the amino acid sequence represented by UniProtKB:Q9URY2. Example: UniProtKB:Q9URY2, Ser-50/Ser-51, MOD:00046|Thr-100/Thr-116/Thr-131, MOD:00047.","definition_xrefs":["PomBase:MLR","PMID:24790093","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule protein alp7 (Schizosaccharomyces pombe)","termid":"PR:000050514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alp7/Phos:(S50,S51,T100,T116,T131)","pombase_gene_id":"SPAC890.02c","synonyms":[{"name":"PomBase_original_PRO_term_name: microtubule protein alp7 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-alp7/Phos:2","type":"exact"},{"name":"UniProtKB:Q9URY2, Ser-50/Ser-51, MOD:00046|Thr-100/Thr-116/Thr-131, MOD:00047","type":"narrow"},{"name":"alp7/Phos:(S50,S51,T100,T116,T131)","type":"exact"}],"termid":"PR:000050595"}


id: PBO:0063309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycomb group ring finger 3","termid":"PBO:0063309"}


id: PR:Q9HDZ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csr101 gene.","definition_xrefs":["UniProtKB:Q9HDZ5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C589.09, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.09","synonyms":[{"name":"Spom972h-csr101","type":"exact"}],"termid":"PR:Q9HDZ5"}


id: PBO:0038466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 5","termid":"PBO:0038466"}


id: PBO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc3","termid":"PBO:0002327"}


id: PBO:0063381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 1 ligand 2","termid":"PBO:0063381"}


id: CHEBI:16356
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-cyclic GMP","termid":"CHEBI:16356"}


id: MONDO:0015268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Medullary sponge kidney (MSK) is a birth defect of the tubules - tiny tubes inside the kidneys. In a normal kidney, urine flows through these tubules as it is being formed. In MSK, tiny sacs called cysts form in the medulla (the inner part of the kidney), creating a sponge-like appearance. The cysts keep urine from flowing freely through the tubules. MSK is present at birth but symptoms typically do not occur until adolescence or adulthood. Problems caused by MSK include blood in the urine, kidney stones, and urinary tract infections. MSK rarely leads to more serious problems, such as total kidney failure. There is no cure for this condition, so treatment is aimed at removing kidney stones and treating urinary tract infections with antibiotics.","direct_ancestors":[{"relation_name":"is_a","term_name":"cystic kidney disease","termid":"MONDO:0002473"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"medullary sponge kidney","secondary_identifiers":["SCTID:236443009","UMLS:C0022681","MESH:D007691","NCIT:C34751","NANDO:2200173","NORD:1421","MedDRA:10027104","MEDGEN:5970","icd11.foundation:1723148250","ICD9:753.17","GARD:232","Orphanet:1309"],"synonyms":[{"name":"Cacchi Ricci disease","type":"related"},{"name":"Cacchi-Ricci disease","type":"exact"},{"name":"Cacchi-Ricci syndrome","type":"related"},{"name":"MSK","type":"exact"},{"name":"Precalicial canalicular ectasia","type":"exact"},{"name":"Precalyceal canalicular ectasia","type":"related"},{"name":"cystic dilatation of renal collecting tubes","type":"related"},{"name":"sponge kidney","type":"related"}],"termid":"MONDO:0015268","xrefs":{"Monarch":{"xref_id":"0015268"}}}


id: PR:Q10189
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo12 gene.","definition_xrefs":["UniProtKB:Q10189","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis-specific protein spo12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.15c","synonyms":[{"name":"Spom972h-spo12","type":"exact"}],"termid":"PR:Q10189"}


id: PBO:0041327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 80","termid":"PBO:0041327"}


id: MONDO:0015572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral malformation due to abnormal neuronal migration (obsolete MONDO:0015572)","secondary_identifiers":["Orphanet:163209"],"synonyms":[{"name":"brain malformation due to abnormal neuronal migration","type":"exact"},{"name":"non-syndromic cerebral malformation due to abnormal neuronal migration","type":"related"}],"termid":"MONDO:0015572","xrefs":{"Monarch":{"xref_id":"0015572"}}}


id: PBO:0058882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10398","termid":"PBO:0058882"}


id: FYPO:0003188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the import of protein into the nucleus is abnormal. Import of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular protein transport during vegetative growth","termid":"FYPO:0000215"},{"relation_name":"is_a","term_name":"abnormal nuclear export","termid":"FYPO:0000506"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"},{"relation_name":"is_a","term_name":"abnormal nuclear import","termid":"FYPO:0001217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein import into nucleus during vegetative growth","synonyms":[{"name":"abnormal protein import into nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003188"}


id: MONDO:0020711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid hormone resistance syndrome characterized by resistance in peripheral tissues but not in the pituitary.","definition_xrefs":["PMID:8475937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid hormone resistance syndrome","termid":"MONDO:0001328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"selective peripheral resistance to thyroid hormone","synonyms":[{"name":"PerRTH","type":"exact"}],"termid":"MONDO:0020711","xrefs":{"Monarch":{"xref_id":"0020711"}}}


id: GO:0060758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Foraging behavior in which an anatomical part of the organism is inserted into the substrate to locate food.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"foraging behavior","termid":"GO:0060756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"foraging behavior by probing substrate","termid":"GO:0060758"}


id: PBO:0084637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mevalonate kinase; acts in the biosynthesis of isoprenoids and sterols, including ergosterol, from mevalonate; human MVK functionally complements the lethality of the erg12 null mutation","termid":"PBO:0084637"}


id: MONDO:0008728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common form of congenital adrenal hyperplasia (CAH), characterized by simple virilizing or salt wasting forms that can manifest with genital ambiguity in females and with adrenal insufficiency (in both sexes), and that presents with dehydration, hypoglycemia in the neonatal period (that can be lethal if untreated), and hyperandrogenia.","definition_xrefs":["Orphanet:90794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"congenital adrenal hyperplasia","termid":"MONDO:0018479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"classic congenital adrenal hyperplasia due to 21-hydroxylase deficiency","secondary_identifiers":["OMIM:201910","NCIT:C131087","UMLS:C2936858","GARD:12665","NANDO:2200374","MESH:C535979","SCTID:717261006","NANDO:1200399","MEDGEN:424833","SCTID:124221007"],"synonyms":[{"name":"21 hydroxylase deficiency","type":"related"},{"name":"21-OHD","type":"exact"},{"name":"21-hydroxylase deficiency","type":"related"},{"name":"CYP21 deficiency","type":"related"},{"name":"adrenal hyperplasia 3","type":"related"},{"name":"adrenal hyperplasia, congenital, due to 21-HYDROXYLASE deficiency","type":"related"},{"name":"adrenal hyperplasia, congenital, due to 21-hydroxylase deficiency","type":"related"},{"name":"classic 21-OHD CAH","type":"exact"},{"name":"classic congenital adrenal hyperplasia due to 21-hydroxylase deficiency","type":"exact"},{"name":"congenital adrenal hyperplasia 1","type":"related"},{"name":"congenital adrenal hyperplasia due to 21-hydroxylase deficiency","type":"related"},{"name":"hyperandrogenism, Nonclassic type, due to 21-Hydroxylase deficiency","type":"related"}],"termid":"MONDO:0008728","xrefs":{"Monarch":{"xref_id":"0008728"}}}


id: PBO:0050307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 9","termid":"PBO:0050307"}


id: MONDO:0014885
data:
  {"annotated_genes":["SJAG_00108"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86473],"is_not":false,"summary":null,"term":"MONDO:0014885"}]},"cv_name":"mondo","definition":"Any Hermansky-Pudlak syndrome in which the cause of the disease is a mutation in the AP3D1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome","termid":"MONDO:0019312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00108":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0005093"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:664511","OMIM:617050","MEDGEN:934713","UMLS:C4310746","GARD:16180"],"synonyms":[{"name":"AP3D1 Hermansky-Pudlak syndrome","type":"exact"},{"name":"HPS10","type":"exact"},{"name":"Hermansky-Pudlak syndrome 10","type":"exact"},{"name":"Hermansky-Pudlak syndrome 10; HPS10","type":"exact"},{"name":"Hermansky-Pudlak syndrome caused by mutation in AP3D1","type":"exact"},{"name":"Hermansky-Pudlak syndrome type 10","type":"exact"}],"termid":"MONDO:0014885","terms_by_termid":{"MONDO:0014885":null},"xrefs":{"Monarch":{"xref_id":"0014885"}}}


id: GO:0035870
data:
  {"annotated_genes":["SJAG_04487","SJAG_03797"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99315,118904],"is_not":false,"summary":null,"term":"GO:0035870"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dITP + H2O = dIMP + H+ + diphosphate.","definition_xrefs":["RHEA:28342","GOC:dgf","PMID:21548881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03797":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0047429"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0047429"],"is_obsolete":false,"name":"dITP diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03531","Reactome:R-HSA-2509838","MetaCyc:RXN0-1602"],"synonyms":[{"name":"2'-deoxyinosine-5'-triphosphate pyrophosphohydrolase activity","type":"exact"},{"name":"dITP pyrophosphatase activity","type":"exact"},{"name":"deoxyinosine triphosphate pyrophosphatase activity","type":"exact"}],"termid":"GO:0035870","terms_by_termid":{"GO:0035870":null}}


id: GO:0075278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of telium development, a process that leads to the formation of a teliospore-bearing sorus of the rust fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of telium development","termid":"GO:0075276"},{"relation_name":"negatively_regulates","term_name":"telium development","termid":"GO:0075275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of telium development","termid":"GO:0075278"}


id: GO:0015483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a long-chain fatty acid from one side of a membrane to the other. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons. This transporter is a porin and so enables the energy independent passage of substances, sized less than 1000 Da, across a membrane. The transmembrane portions of porins consist exclusively of beta-strands which form a beta-barrel. They are found in the outer membranes of Gram-negative bacteria, mitochondria, plastids and possibly acid-fast Gram-positive bacteria.","definition_xrefs":["GOC:mtg_transport","TC:1.B.9.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transmembrane transporter activity","termid":"GO:0005324"},{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"long-chain fatty acid transporting porin activity","termid":"GO:0015483"}


id: PBO:0052351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 4A","termid":"PBO:0052351"}


id: GO:0020036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A disk-like structure that appears at the periphery of a red blood cell infected by an apicomplexan parasite, characterized by a translucent lumen and an electron-dense coat of variable thickness; often appears to be tethered to the host cell membrane by fibrous connections with the erythrocyte cytoskeleton.","definition_xrefs":["PMID:16705161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Maurer's cleft","synonyms":[{"name":"Maurers cleft","type":"exact"}],"termid":"GO:0020036"}


id: PBO:0004624
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.2.4","termid":"PBO:0004624"}


id: PBO:0003080
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains HSE element","termid":"PBO:0003080"}


id: PBO:0051240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-51-2 (pseudogene)","termid":"PBO:0051240"}


id: GO:0086086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an AV node cardiac muscle cell contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in AV node cell action potential repolarization","synonyms":[{"name":"voltage-gated potassium channel activity involved in AV node cardiac muscle cell action potential repolarization","type":"exact"},{"name":"voltage-gated potassium channel activity involved in atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086086"}


id: PBO:0052961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynureninase pseudogene 1","termid":"PBO:0052961"}


id: PBO:0111915
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBAP2/UBAP2L","termid":"PBO:0111915"}


id: PR:P87311
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC31F10.10c gene.","definition_xrefs":["UniProtKB:P87311","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYND-type zinc finger protein C31F10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.10c","synonyms":[{"name":"Spom972h-SPBC31F10.10c","type":"exact"}],"termid":"PR:P87311"}


id: PBO:0009082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Cfh4 (predicted)","termid":"PBO:0009082"}


id: GO:0001956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a neurotransmitter.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter transport","termid":"GO:0051590"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of neurotransmitter secretion","synonyms":[{"name":"activation of neurotransmitter secretion","type":"narrow"},{"name":"stimulation of neurotransmitter secretion","type":"narrow"},{"name":"up regulation of neurotransmitter secretion","type":"exact"},{"name":"up-regulation of neurotransmitter secretion","type":"exact"},{"name":"upregulation of neurotransmitter secretion","type":"exact"}],"termid":"GO:0001956"}


id: PBO:0062316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 1","termid":"PBO:0062316"}


id: PBO:0048246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12G","termid":"PBO:0048246"}


id: PBO:0069315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 573, pseudogene","termid":"PBO:0069315"}


id: GO:0034893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-nitrodimethylamine + O2 + 2 H+ + 2 e- = N-nitromethylamine + formaldehyde + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N-nitrodimethylamine hydroxylase activity (obsolete GO:0034893)","termid":"GO:0034893"}


id: FYPO:0001417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms an equatorial microtubule organizing center in an abnormal location. The normal location is at the center of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0002399","FYPO:0001320"],"is_obsolete":false,"name":"mislocalized eMTOC","synonyms":[{"name":"mislocalised eMTOC","type":"exact"},{"name":"mislocalized eMTOC during mitotic cell cycle","type":"related"},{"name":"mislocalized eMTOC during vegetative growth","type":"exact"},{"name":"mislocalized equatorial microtubule organizing center","type":"exact"}],"termid":"FYPO:0001417"}


id: FYPO:0005031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which more ribonucleotides than normal are incorporated into the lagging strand during mitotic DNA replication.","definition_xrefs":["PMID:25664722","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ribonucleotide incorporation into DNA","termid":"FYPO:0007680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased ribonucleotide incorporation on lagging strand","synonyms":[{"name":"increased rNMP incorporation on lagging strand","type":"related"},{"name":"increased rNTP incorporation on lagging strand","type":"related"},{"name":"increased ribonucleotide residue incorporation on lagging strand","type":"exact"}],"termid":"FYPO:0005031"}


id: MONDO:0002419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurological disorder presenting in childhood that is characterized by motor and/or phonic tics that occur daily or nearly daily for one to twelve months and are not attributed to an identifiable cause.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tic disorder","termid":"MONDO:0002420"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient tic disorder","secondary_identifiers":["ICD9:307.21","ICD10CM:F95.0","MEDGEN:52814","NCIT:C116767","SCTID:56573006","UMLS:C0040702","DOID:2768"],"synonyms":[{"name":"benign Tic disorder of childhood","type":"exact"}],"termid":"MONDO:0002419","xrefs":{"Monarch":{"xref_id":"0002419"}}}


id: PBO:0066968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 270","termid":"PBO:0066968"}


id: MOD:01009
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenated proline","termid":"MOD:01009"}


id: PBO:0027574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_envelope_morphology_during_mitosis","termid":"PBO:0027574"}


id: FYPO:0005638
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during the first meiotic nuclear division results in the connection of a single kinetochore to both spindle poles.","definition_xrefs":["PMID:21920317","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal attachment of spindle microtubules to kinetochore during meiosis I","termid":"FYPO:0000209"},{"relation_name":"is_a","term_name":"merotelic kinetochore attachment","termid":"FYPO:0002651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"merotelic kinetochore attachment during meiosis I","synonyms":[{"name":"merotelic attachment of spindle microtubules to kinetochore during meiosis I","type":"exact"},{"name":"merotelic kinetochore attachment during M phase of meiosis I","type":"exact"},{"name":"merotelic kinetochore attachment during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005638"}


id: PBO:0081313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 93","termid":"PBO:0081313"}


id: PBO:0001242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0136 family protein","termid":"PBO:0001242"}


id: PBO:0060412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 40, NatD catalytic subunit","termid":"PBO:0060412"}


id: PATO:0002202
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Handedness where the organism preferentially uses the left hand or foot for tasks requiring the use of a single hand or foot or a dominant hand or foot.","definition_xrefs":["birnlex:2038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"handedness","termid":"PATO:0002201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"left handedness","termid":"PATO:0002202"}


id: GO:0044280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Electron dense material observed coating the cytoplasmic face of the plasma membrane in certain regions of a neuron, e.g., the axon initial segment; the nodal membrane at the Node of Ranvier.","definition_xrefs":["NIF_Subcellular:sao1938587839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extrinsic component of cytoplasmic side of plasma membrane","termid":"GO:0031234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"subplasmalemmal coating","termid":"GO:0044280"}


id: PBO:0076286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spleen associated tyrosine kinase","termid":"PBO:0076286"}


id: GO:0051782
data:
  {"annotated_genes":["SJAG_00845","SJAG_04943","SJAG_00526","SJAG_04455","SJAG_01464","SJAG_02169","SJAG_03508","SJAG_00883","SJAG_06270","SJAG_03592","SJAG_02514","SJAG_01386","SJAG_02795","SJAG_04551","SJAG_00229","SJAG_03048","SJAG_03681","SJAG_03353","SJAG_01790"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[102681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[104012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[93185,99991,102460,107410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902413"},{"annotations":[102686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[73126,91067,107851,93270,107411,93804,107546,92072,95972,99914,110477,116205,105361,93186,101592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"negatively_regulates","term_name":"cell division","termid":"GO:0051301"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00526":null,"SJAG_00845":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_02169":null,"SJAG_02514":null,"SJAG_02795":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04455":null,"SJAG_04551":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell division","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell division","type":"exact"},{"name":"down-regulation of cell division","type":"exact"},{"name":"downregulation of cell division","type":"exact"},{"name":"inhibition of cell division","type":"narrow"}],"termid":"GO:0051782","terms_by_termid":{"GO:0031030":null,"GO:1902413":null,"GO:1903472":null,"GO:1903500":null,"GO:1905757":null,"GO:2000432":null}}


id: GO:0008581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of the Gly76-Lys48 isopeptide bond of polyubiquitin.","definition_xrefs":["MEROPS:c19p001","ISBN:0120793709"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-specific protease 5 activity (obsolete GO:0008581)","synonyms":[{"name":"ubiquitin isopeptidase T activity","type":"exact"},{"name":"ubiquitin-specific protease 5 activity","type":"exact"}],"termid":"GO:0008581"}


id: MONDO:0004125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well-circumscribed benign smooth muscle neoplasm arising from the rectum. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal leiomyoma","termid":"MONDO:0003299"},{"relation_name":"is_a","term_name":"benign neoplasm of rectum","termid":"MONDO:0021462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectum leiomyoma","secondary_identifiers":["MEDGEN:233390","DOID:7160","NCIT:C5552","UMLS:C1335682"],"synonyms":[{"name":"leiomyoma of rectum","type":"exact"},{"name":"leiomyoma of the rectum","type":"exact"},{"name":"rectal leiomyoma","type":"exact"},{"name":"rectum leiomyoma","type":"exact"}],"termid":"MONDO:0004125","xrefs":{"Monarch":{"xref_id":"0004125"}}}


id: GO:0000406
data:
  {"annotated_genes":["SJAG_01076","SJAG_02226","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100909,106395,117110],"is_not":false,"summary":null,"term":"GO:0000406"}]},"cv_name":"molecular_function","definition":"Binding to a DNA segment that contains double-stranded DNA flanked by a region of single-stranded DNA.","definition_xrefs":["GOC:elh","PMID:16781730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01419":null,"SJAG_02226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"double-strand/single-strand DNA junction binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000406","terms_by_termid":{"GO:0000406":null}}


id: PBO:0050164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 20","termid":"PBO:0050164"}


id: PBO:0112606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-22 sterol desaturase (cytochrome P450) Erg5","termid":"PBO:0112606"}


id: MONDO:0010585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked form of ectodermal dysplasia which results from mutations of the gene encoding ectodysplasin.","definition_xrefs":["MESH:D053358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"hypohidrotic ectodermal dysplasia","termid":"MONDO:0016535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"X-linked hypohidrotic ectodermal dysplasia","secondary_identifiers":["Orphanet:181","SCTID:239007005","GARD:10427","icd11.foundation:941793098","UMLS:C0162359","DOID:0111664","MEDGEN:57890","OMIM:305100"],"synonyms":[{"name":"CST syndrome","type":"related"},{"name":"Christ-Siemens-Touraine syndrome","type":"exact"},{"name":"Eda1","type":"related"},{"name":"X-linked anhidrotic ectodermal dysplasia","type":"exact"},{"name":"X-linked hypohidrotic ectodermal dysplasia","type":"exact"},{"name":"XHED","type":"exact"},{"name":"Xlhed","type":"related"},{"name":"anhidrotic ectodermal dysplasia X-linked","type":"related"},{"name":"ectodermal dysplasia 1","type":"related"},{"name":"ectodermal dysplasia 1, hypohidrotic, X-linked","type":"related"},{"name":"ectodermal dysplasia 1, hypohidrotic, X-linked, X-linked recessive","type":"exact"},{"name":"ectodermal dysplasia 1, hypohidrotic/hair/Tooth type, X-linked","type":"related"},{"name":"ectodermal dysplasia, anhidrotic, X-linked","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic, 1","type":"related"},{"name":"hypohidrotic ectodermal dysplasia X-linked","type":"related"},{"name":"hypohidrotic ectodermal dysplasia, X-linked","type":"exact"}],"termid":"MONDO:0010585","xrefs":{"Monarch":{"xref_id":"0010585"}}}


id: GO:0018131
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052837"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of oxazole or thiazole, five-membered heterocyclic ring structures containing an oxygen and a sulfur, respectively, in the 1-position and a nitrogen in the 3-position.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole or thiazole metabolic process","termid":"GO:0046484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxazole or thiazole biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"oxazole or thiazole anabolism","type":"exact"},{"name":"oxazole or thiazole biosynthesis","type":"exact"},{"name":"oxazole or thiazole formation","type":"exact"},{"name":"oxazole or thiazole synthesis","type":"exact"}],"termid":"GO:0018131","terms_by_termid":{"GO:0052837":null}}


id: MONDO:0003510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor predominantly affecting young men and often associated with cryptorchidism. Seminoma is the most frequently seen malignant testicular germ cell tumor, followed by embryonal carcinoma and yolk sac tumor.","definition_xrefs":["NCIT:C9063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"},{"relation_name":"is_a","term_name":"testicular germ cell tumor","termid":"MONDO:0010108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant testicular germ cell tumor","secondary_identifiers":["UMLS:C0855197","DOID:5556","ICD9:186.9","MEDGEN:163616","SCTID:713646001"],"synonyms":[{"name":"malignant germ cell neoplasm of testis","type":"exact"},{"name":"malignant germ cell neoplasm of the testis","type":"exact"},{"name":"malignant germ cell tumor of testis","type":"exact"},{"name":"malignant germ cell tumor of the testis","type":"exact"},{"name":"malignant germ cell tumour of testis","type":"exact"},{"name":"malignant germ cell tumour of the testis","type":"exact"},{"name":"malignant testicular germ cell neoplasm","type":"exact"},{"name":"malignant testicular germ cell tumor","type":"exact"},{"name":"testicular ca. (no germ/tropho.)","type":"exact"},{"name":"testicular cancer","type":"broad"},{"name":"testicular cancer (excluding germ cell or trophoblastic cancer)","type":"exact"},{"name":"testicular germ cell cancer","type":"exact"},{"name":"testicular malignant germ cell cancer","type":"related"}],"termid":"MONDO:0003510","xrefs":{"Monarch":{"xref_id":"0003510"}}}


id: PBO:0005231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1941 family protein","termid":"PBO:0005231"}


id: GO:1903110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single-strand break repair via homologous recombination.","definition_xrefs":["GO_REF:0000058","PMID:24339919","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"regulates","term_name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"regulation of single-strand break repair via homologous recombination","termid":"GO:1903110"}


id: GO:0052106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a community of single-celled organisms living in intimate contact with a host organism monitors population density by detecting the concentration of small diffusible signal molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete quorum sensing involved in interaction with host (obsolete GO:0052106)","synonyms":[{"name":"quorum sensing during interaction with host","type":"related"}],"termid":"GO:0052106"}


id: MONDO:0011589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia with coloboma 2","secondary_identifiers":["MEDGEN:343030","OMIM:605738","UMLS:C1854018","MESH:C565300","GARD:15385"],"synonyms":[{"name":"MCOPCB2","type":"exact"},{"name":"microphthalmia, colobomatous, isolated 2","type":"related"},{"name":"microphthalmia, isolated, with coloboma 2","type":"related"}],"termid":"MONDO:0011589","xrefs":{"Monarch":{"xref_id":"0011589"}}}


id: PATO:0000279
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility quality of inhering in a male by virtue of the bearer's disposition to initiate, sustain, or support reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male fertility","termid":"PATO:0000279"}


id: GO:1902448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of shade avoidance.","definition_xrefs":["GOC:TermGenie","PMID:23763263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of shade avoidance","termid":"GO:1902446"},{"relation_name":"positively_regulates","term_name":"shade avoidance","termid":"GO:0009641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of shade avoidance","synonyms":[{"name":"activation of shade avoidance","type":"narrow"},{"name":"up regulation of shade avoidance","type":"exact"},{"name":"up-regulation of shade avoidance","type":"exact"},{"name":"upregulation of shade avoidance","type":"exact"}],"termid":"GO:1902448"}


id: MONDO:1010492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, pig","secondary_identifiers":["OMIA:001041-9823"],"termid":"MONDO:1010492","xrefs":{"Monarch":{"xref_id":"1010492"}}}


id: GO:0110143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bound organelle that envelops particles of magnetic iron minerals in magnetotactic bacteria. Magnetosomes form linear chains that align along the cellular motility axis at midcell and function in bacterial navigation along the Earth's magnetic field. They are formed by invagination of the cell inner membrane; in some species they remain connected to the inner membrane, in others they pinch off to form independent intracellular vesicles.","definition_xrefs":["PMID:27620945","GOC:aa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"magnetosome","termid":"GO:0110143"}


id: PBO:0017464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_gene_product","termid":"PBO:0017464"}


id: PBO:0083566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF DNF2/YDR093W","termid":"PBO:0083566"}


id: PBO:0066537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 3","termid":"PBO:0066537"}


id: MONDO:0011594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian dysgenesis, hypergonadotropic, with short stature and recurrent metabolic acidosis","secondary_identifiers":["MEDGEN:460321","UMLS:C3148970","OMIM:605756"],"synonyms":[{"name":"gonadal dysgenesis, hypergonadotropic, 20 type, with short stature and recurrent metabolic acidosis","type":"related"},{"name":"ovarian dysgenesis, hypergonadotropic, with short stature and recurrent metabolic acidosis","type":"exact"}],"termid":"MONDO:0011594","xrefs":{"Monarch":{"xref_id":"0011594"}}}


id: PATO:0001143
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001143 ig e concentration value (obsolete PATO:0001143)","termid":"PATO:0001143"}


id: FYPO:0001713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of malate into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal malate import","synonyms":[{"name":"abnormal malate import across plasma membrane","type":"exact"},{"name":"abnormal malate import during mitotic cell cycle","type":"related"},{"name":"abnormal malate import during vegetative growth","type":"exact"},{"name":"abnormal malate import into cell","type":"exact"},{"name":"abnormal malate uptake","type":"exact"},{"name":"abnormal malic acid import","type":"related"}],"termid":"FYPO:0001713"}


id: SO:0000291
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a repeating trinucleotide sequence (three bases).","direct_ancestors":[{"relation_name":"is_a","term_name":"microsatellite","termid":"SO:0000289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide_repeat_microsatellite_feature","synonyms":[{"name":"dinucleotide repeat microsatellite marker","type":"related"},{"name":"rinucleotide repeat microsatellite","type":"exact"},{"name":"trinucleotide repeat microsatellite feature","type":"exact"},{"name":"trinucleotide repeat microsatellite locus","type":"exact"}],"termid":"SO:0000291"}


id: PBO:0046402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythrocyte membrane protein band 4.1 like 5","termid":"PBO:0046402"}


id: MONDO:0700128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Down syndrome in which the extra (partial or total) copy of chromosome 21 genetic material is attached to another chromosome.","definition_xrefs":["PMID:20691415","PMID:29218069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Down syndrome","termid":"MONDO:0008608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation Down syndrome","secondary_identifiers":["UMLS:C1269751","MEDGEN:693553"],"synonyms":[{"name":"Robertsonian Translocation Trisomy 21","type":"narrow"}],"termid":"MONDO:0700128","xrefs":{"Monarch":{"xref_id":"0700128"}}}


id: PBO:0002851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-3 peroxisome import protein (predicted)","termid":"PBO:0002851"}


id: PBO:0063813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 2","termid":"PBO:0063813"}


id: PBO:0029332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2A_phosphorylation","termid":"PBO:0029332"}


id: PBO:0053112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase 2","termid":"PBO:0053112"}


id: PBO:0040013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 2","termid":"PBO:0040013"}


id: MONDO:0014643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital cataract-microcephaly-nevus flammeus simplex-severe intellectual disability syndrome","secondary_identifiers":["Orphanet:464738","OMIM:616449","MEDGEN:897292","GARD:17821","UMLS:C4225323"],"synonyms":[{"name":"BASEL-Vanagaite-SMIRIN-YOSEF syndrome","type":"related"},{"name":"BVSYS","type":"related"},{"name":"Basel-Vanagait-Smirin-Yosef syndrome","type":"exact"}],"termid":"MONDO:0014643","xrefs":{"Monarch":{"xref_id":"0014643"}}}


id: PR:O94334
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein pof13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.01c","synonyms":[{"name":"Spom972h-pof13","type":"exact"}],"termid":"PR:O94334"}


id: GO:0000266
data:
  {"annotated_genes":["SJAG_01212","SJAG_05261","SJAG_02848","SJAG_03464","SJAG_01594","SJAG_04732","SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66966,99581],"is_not":false,"summary":null,"term":"GO:0000266"},{"annotations":[103078,95307,102820],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090149"},{"annotations":[116606],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0090258"},{"annotations":[109190],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090141"}]},"cv_name":"biological_process","definition":"The division of a mitochondrion within a cell to form two or more separate mitochondrial compartments.","definition_xrefs":["PMID:11038192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"},{"relation_name":"is_a","term_name":"organelle fission","termid":"GO:0048285"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01212":null,"SJAG_01594":null,"SJAG_02848":null,"SJAG_03464":null,"SJAG_04203":null,"SJAG_04732":null,"SJAG_05261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"mitochondrial fission","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial division","type":"exact"},{"name":"mitochondrial proliferation","type":"related"}],"termid":"GO:0000266","terms_by_termid":{"GO:0000266":null,"GO:0090141":null,"GO:0090149":null,"GO:0090258":null}}


id: PBO:0091562
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FolliculiN-interacting Protein","termid":"PBO:0091562"}


id: FYPO:0001433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of decamethylenediguanidine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to decamethylenediguanidine","synonyms":[{"name":"resistance to Anticoman","type":"exact"},{"name":"resistance to decamethylenediguanidine during mitotic cell cycle","type":"related"},{"name":"resistance to decamethylenediguanidine during vegetative growth","type":"exact"},{"name":"resistant to decamethylenediguanidine","type":"exact"}],"termid":"FYPO:0001433"}


id: PBO:0017578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein Eos1 (predicted)","termid":"PBO:0017578"}


id: PBO:0056534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylcrotonyl-CoA carboxylase subunit 2","termid":"PBO:0056534"}


id: MONDO:0001531
data:
  {"annotated_genes":["SJAG_03204","SJAG_02839","SJAG_02093","SJAG_00108","SJAG_02453","SJAG_03115","SJAG_03712","SJAG_01466","SJAG_02091","SJAG_01732"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86469,86470,86468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018794"},{"annotations":[86675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009206"},{"annotations":[86473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014885"},{"annotations":[86333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[85564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012465"},{"annotations":[87629,87628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008559"},{"annotations":[86272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010518"}]},"cv_name":"mondo","definition":"A condition in which there is a deviation from or interruption of the normal coagulation properties of the blood.","definition_xrefs":["NCIT:C2902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_01466":null,"SJAG_01732":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02453":null,"SJAG_02839":null,"SJAG_03115":null,"SJAG_03204":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"blood coagulation disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:287.8","DOID:1247","ICD9:286.9","MESH:D001778","EFO:0009314","ICD9:286","MEDGEN:604","SCTID:64779008","UMLS:C0005779"],"synonyms":[{"name":"blood coagulation disorder","type":"exact"},{"name":"coagulation defect","type":"exact"},{"name":"coagulation disorder","type":"exact"},{"name":"coagulation disorder, blood","type":"exact"},{"name":"coagulation disorders, blood","type":"exact"},{"name":"coagulopathy","type":"exact"},{"name":"disorder, blood coagulation","type":"exact"},{"name":"disorders, blood coagulation","type":"exact"},{"name":"postpartum coagulation defect","type":"exact"},{"name":"postpartum coagulation defect with delivery","type":"exact"}],"termid":"MONDO:0001531","terms_by_termid":{"MONDO:0008559":null,"MONDO:0009206":null,"MONDO:0010518":null,"MONDO:0011997":null,"MONDO:0012465":null,"MONDO:0014885":null,"MONDO:0018794":null},"xrefs":{"Monarch":{"xref_id":"0001531"}}}


id: MONDO:0015561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aleukemic mast cell leukemia (obsolete MONDO:0015561)","termid":"MONDO:0015561","xrefs":{"Monarch":{"xref_id":"0015561"}}}


id: MONDO:0004545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant peripheral nerve sheath tumor occurring during adulthood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant peripheral nerve sheath tumor","termid":"MONDO:0017827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult malignant schwannoma","secondary_identifiers":["DOID:8369","UMLS:C0278622","MEDGEN:75845","NCIT:C7814"],"synonyms":[{"name":"adult MPNST","type":"exact"},{"name":"adult malignant neoplasm of peripheral nerve sheath","type":"exact"},{"name":"adult malignant neoplasm of the peripheral nerve sheath","type":"exact"},{"name":"adult malignant neurilemmoma","type":"exact"},{"name":"adult malignant peripheral nerve sheath neoplasm","type":"exact"},{"name":"adult malignant peripheral nerve sheath tumor","type":"exact"},{"name":"adult malignant peripheral nerve sheath tumour","type":"exact"},{"name":"adult malignant schwannoma","type":"exact"},{"name":"adult malignant tumor of peripheral nerve sheath","type":"exact"},{"name":"adult malignant tumor of the peripheral nerve sheath","type":"exact"},{"name":"adult malignant tumour of peripheral nerve sheath","type":"exact"},{"name":"adult malignant tumour of the peripheral nerve sheath","type":"exact"},{"name":"malignant peripheral nerve sheath tumor","type":"broad"},{"name":"malignant peripheral nerve sheath tumour","type":"broad"}],"termid":"MONDO:0004545","xrefs":{"Monarch":{"xref_id":"0004545"}}}


id: PBO:0050563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRG pseudogene 1","termid":"PBO:0050563"}


id: GO:0140696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxyglutarate + a quinone = 2-oxoglutarate + a quinol.","definition_xrefs":["RHEA:58664","PMID:30498244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(S)-2-hydroxyglutarate dehydrogenase activity","secondary_identifiers":["EC:1.1.5.13"],"synonyms":[{"name":"L-2-hydroxyglutarate dehydrogenase activity","type":"exact"}],"termid":"GO:0140696"}


id: PBO:0069021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 266, pseudogene","termid":"PBO:0069021"}


id: PBO:0043557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type IV alpha 6 chain","termid":"PBO:0043557"}


id: PBO:0028734
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_L-selenoneine_level_during_vegetative_growth","termid":"PBO:0028734"}


id: FYPO:0004133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of reactive oxygen species (ROS) measured in a cell that is subject to nitrogen starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal reactive oxygen species level during nitrogen starvation","synonyms":[{"name":"normal ROS accumulation during nitrogen starvation","type":"related"},{"name":"normal ROS level during nitrogen starvation","type":"exact"},{"name":"normal cellular reactive oxygen species level during nitrogen starvation","type":"exact"},{"name":"normal reactive oxygen species level during nitrogen depletion","type":"exact"},{"name":"normal reactive oxygen species level during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0004133"}


id: GO:0014038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Schwann cell differentiation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"regulates","term_name":"Schwann cell differentiation","termid":"GO:0014037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell differentiation","termid":"GO:0014038"}


id: GO:0060825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands contributing to the anterior/posterior pattern of the neural plate.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:0060825"}


id: PBO:0061086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 4","termid":"PBO:0061086"}


id: GO:0005751
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains the 13 polypeptide subunits of cytochrome c oxidase, including cytochrome a and cytochrome a3. Catalyzes the oxidation of reduced cytochrome c by dioxygen (O2).","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex IV (obsolete GO:0005751)","termid":"GO:0005751"}


id: PBO:0043429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 1","termid":"PBO:0043429"}


id: PBO:0027410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_thioredoxin_peroxidase_activity","termid":"PBO:0027410"}


id: PBO:0052323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1328 pseudogene 1","termid":"PBO:0052323"}


id: PBO:0049523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Q variant histone 1, pseudogene","termid":"PBO:0049523"}


id: PBO:0056006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5","termid":"PBO:0056006"}


id: PBO:0072910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCAN domain containing 3","termid":"PBO:0072910"}


id: PBO:0070381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho associated coiled-coil containing protein kinase 2","termid":"PBO:0070381"}


id: GO:0019364
data:
  {"annotated_genes":["SJAG_00839","SJAG_02135","SJAG_02369","SJAG_04048","SJAG_01310","SJAG_02107","SJAG_05314","SJAG_00027","SJAG_02796","SJAG_02009","SJAG_03828","SJAG_04334","SJAG_03091","SJAG_04495","SJAG_06621","SJAG_00605","SJAG_03373","SJAG_04192","SJAG_02945","SJAG_03660","SJAG_06622","SJAG_00461","SJAG_00685","SJAG_03903","SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94863,106147,116652,105778,109702,109700,98590,103698,95352,105776,105777,78210,109703,98318,109698,103954,106146,109697,109699,109701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[72570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[72573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[73408,76377],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[70420],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.","definition_xrefs":["GOC:vw","GOC:pde","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"pyridine nucleotide metabolic process","termid":"GO:0019362"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyridine nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyridine nucleotide breakdown","type":"exact"},{"name":"pyridine nucleotide catabolism","type":"exact"},{"name":"pyridine nucleotide degradation","type":"exact"}],"termid":"GO:0019364","terms_by_termid":{"GO:0006110":null,"GO:0006742":null,"GO:0019677":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: PBO:0068078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 384","termid":"PBO:0068078"}


id: FYPO:0005498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements occurs to a greater extent than normal during a cellular response to miconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription from CRE promoter","termid":"FYPO:0005495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"increased transcription from CRE promoter during cellular response to miconazole","synonyms":[{"name":"expression of CRE target genes increased during cellular response to miconazole","type":"related"},{"name":"increased transcription from CRE promoter during cellular response to miconazole during mitotic cell cycle","type":"related"},{"name":"increased transcription from CRE promoter during cellular response to miconazole during vegetative growth","type":"exact"}],"termid":"FYPO:0005498"}


id: MONDO:1010423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paroxysmal dyskinesia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dyskinesia, non-human animal","termid":"MONDO:1010004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysmal dyskinesia, domestic cat","secondary_identifiers":["OMIA:001543-9685"],"termid":"MONDO:1010423","xrefs":{"Monarch":{"xref_id":"1010423"}}}


id: FYPO:0005330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of pyrimidine-pyrimidone 6-4 photoproducts by error-free translesion synthesis occurs to a lower extent than normal.","definition_xrefs":["PMID:20453833","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-free translesion synthesis","termid":"FYPO:0005323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000293"],"is_obsolete":false,"name":"decreased error-free translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts","synonyms":[{"name":"decreased error-free translesion synthesis across TT-(6-4)","type":"exact"},{"name":"decreased error-free translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during mitotic cell cycle","type":"related"},{"name":"decreased error-free translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during vegetative growth","type":"exact"}],"termid":"FYPO:0005330"}


id: PBO:0040709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 like 14","termid":"PBO:0040709"}


id: MOD:00752
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with ADP-ribose through formation of a glycosidic bond.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","synonyms":[{"name":"ADP-rybosylation (from NAD)","type":"exact"},{"name":"ADPRibRes","type":"exact"}],"termid":"MOD:00752"}


id: PBO:0052423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIRREL3 antisense RNA 2","termid":"PBO:0052423"}


id: MOD:01953
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues and a four-iron cluster to tetrakis-L-cysteinyl tetrairon octanitrosyl.","definition_xrefs":["PubMed:21182249","RESID:AA0599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron containing modified residue","termid":"MOD:00738"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tetrakis-L-cysteinyl tetrairon octanitrosyl","termid":"MOD:01953"}


id: MONDO:1010981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydranencephaly that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydranencephaly, non-human animal","termid":"MONDO:1010232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydranencephaly, sheep","secondary_identifiers":["OMIA:000486-9940"],"termid":"MONDO:1010981","xrefs":{"Monarch":{"xref_id":"1010981"}}}


id: PBO:0047164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 192 member B, pseudogene","termid":"PBO:0047164"}


id: GO:0047775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + citramalate = acetate + (3S)-citramalyl-CoA.","definition_xrefs":["EC:2.8.3.11","MetaCyc:CITRAMALATE-COA-TRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"citramalate CoA-transferase activity","secondary_identifiers":["RHEA:17621"],"synonyms":[{"name":"acetyl-CoA:citramalate CoA-transferase activity","type":"related"}],"termid":"GO:0047775"}


id: PBO:0038663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase bubblegum family member 2","termid":"PBO:0038663"}


id: MONDO:0014253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare, primary immunodeficiency. It is caused by a currently undetermined defect in the Fas-induced apoptosis pathway. No mutations in Fas, FASLG or CASP10 are detectable. Disruption of Fas-induced apoptosis impairs lymphocyte homeostasis and immune tolerance. Characteristic laboratory findings include an increase in circulating, double-negative (CD4-/CD8-) T cells in the setting of immune-mediated anemia, thrombocytopenia and neutropenia. Clinical signs present in childhood include fatigue, pallor, bruising, hepatosplenomegaly and chronic, non-malignant, non-infectious lymphadenopathy. The clinical course is influenced by a strong association with other autoimmune disorders and an increased risk for developing Hodgkin and non-Hodgkin lymphoma.","definition_xrefs":["NCIT:C39577"],"gene_count":0,"genotype_count":0,"name":"obsolete autoimmune lymphoproliferative syndrome type 3 (obsolete MONDO:0014253)","secondary_identifiers":["NANDO:2200743"],"synonyms":[{"name":"ALPS-U","type":"exact"},{"name":"ALPS3","type":"exact"},{"name":"CVID9","type":"exact"},{"name":"PRKCD autoimmune lymphoproliferative syndrome","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome caused by mutation in PRKCD","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome type III","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome, type 3","type":"related"},{"name":"autoimmune lymphoproliferative syndrome, type III","type":"related"},{"name":"autoimmune lymphoproliferative syndrome-undetermined variant","type":"exact"},{"name":"common variable immunodeficiency 9","type":"exact"},{"name":"immunodeficiency, common variable, 9","type":"related"},{"name":"immunodeficiency, common variable, 9, formerly","type":"related"},{"name":"type 3 ALPS","type":"exact"}],"termid":"MONDO:0014253","xrefs":{"Monarch":{"xref_id":"0014253"}}}


id: PR:O14092
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5-aminolevulinate synthase, erythroid-specific, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01637","PANTHER:PTHR13693:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminolevulinate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.09","secondary_identifiers":["UniProtKB:O14092"],"synonyms":[{"name":"5-aminolevulinic acid synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALAS2","type":"exact"},{"name":"delta-ALA synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"delta-aminolevulinate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14092"}


id: MONDO:0012432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the CEP290 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome with oculorenal defect","termid":"MONDO:0009480"},{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"},{"relation_name":"is_a","term_name":"CEP290-related ciliopathy","termid":"MONDO:0100451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0020022"],"is_obsolete":false,"name":"Joubert syndrome 5","secondary_identifiers":["GARD:15475","DOID:0111000","MEDGEN:347545","MESH:C537688","OMIM:610188","UMLS:C1857780"],"synonyms":[{"name":"CEP290 Joubert syndrome","type":"exact"},{"name":"JBTS5","type":"exact"},{"name":"Joubert syndrome 5","type":"exact"},{"name":"Joubert syndrome caused by mutation in CEP290","type":"exact"},{"name":"Joubert syndrome type 5","type":"exact"}],"termid":"MONDO:0012432","xrefs":{"Monarch":{"xref_id":"0012432"}}}


id: PBO:0018206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein Coq11","termid":"PBO:0018206"}


id: SO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A group II intron that recognizes IBS1/EBS1 and IBS2/EBS2 for the 5-prime exon and IBS3/EBS3 for the 3-prime exon.","definition_xrefs":["PMID:20463000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"group_II_intron","termid":"SO:0000603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_IIB_intron","synonyms":[{"name":"group IIB intron","type":"exact"}],"termid":"SO:0000382"}


id: PBO:0108607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER to Golgi ceramide transport protein, lipocalin superfamily Svf1","termid":"PBO:0108607"}


id: PBO:0017079
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GalactoMannan Synthesis defective","termid":"PBO:0017079"}


id: GO:0052364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its symbiont resulting in the breakdown of substances. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of substance in symbiont (obsolete GO:0052364)","termid":"GO:0052364"}


id: FYPO:0006390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell contains more than one meiotic spindle during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002399","FYPO:0000120","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"multiple meiotic spindles","synonyms":[{"name":"additional meiotic spindles present","type":"exact"},{"name":"extra meiotic spindles","type":"exact"},{"name":"increased number of meiotic spindles","type":"exact"},{"name":"meiotic spindles present in greater numbers","type":"exact"},{"name":"multiple spindles during meiosis","type":"exact"}],"termid":"FYPO:0006390"}


id: PBO:0077252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 3","termid":"PBO:0077252"}


id: PBO:0116806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP1 antisense RNA 6","termid":"PBO:0116806"}


id: PBO:0080194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 2","termid":"PBO:0080194"}


id: PBO:0027848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_vegetative_cell","termid":"PBO:0027848"}


id: MONDO:0016981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"disorder of thiamine metabolism and transport","termid":"MONDO:0017578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"infantile spams-psychomotor retardation-progressive brain atrophy-basal ganglia disease syndrome","secondary_identifiers":["Orphanet:263410","UMLS:C5190692","MEDGEN:1675231","GARD:20899"],"synonyms":[{"name":"infantile spasms-psychomotor retardation-progressive brain atrophy-basal ganglia disease syndrome","type":"related"}],"termid":"MONDO:0016981","xrefs":{"Monarch":{"xref_id":"0016981"}}}


id: PBO:0039459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD10 intronic transcript 1","termid":"PBO:0039459"}


id: PBO:0089796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA hydrolase/succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial Ach1","termid":"PBO:0089796"}


id: MONDO:1011627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus epilepsy of Lafora, non-human animal","secondary_identifiers":["OMIA:000690"],"termid":"MONDO:1011627","xrefs":{"Monarch":{"xref_id":"1011627"}}}


id: GO:0047079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyuridine + 2-oxoglutarate + O2 = 2-deoxy-D-ribono-1,4-lactone + CO2 + succinate + uracil.","definition_xrefs":["RHEA:23316","EC:1.14.11.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"deoxyuridine 1'-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R02486","MetaCyc:1.14.11.10-RXN"],"synonyms":[{"name":"2'-deoxyuridine,2-oxoglutarate:oxygen oxidoreductase (1'-hydroxylating)","type":"related"},{"name":"pyrimidine-deoxynucleoside 1'-dioxygenase activity","type":"broad"},{"name":"pyrimidine-deoxynucleoside,2-oxoglutarate 1'-dioxygenase activity","type":"broad"}],"termid":"GO:0047079"}


id: PBO:0071203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 44","termid":"PBO:0071203"}


id: MONDO:1011953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysplasia, non-human animal","secondary_identifiers":["OMIA:000937"],"termid":"MONDO:1011953","xrefs":{"Monarch":{"xref_id":"1011953"}}}


id: PBO:0077337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 74","termid":"PBO:0077337"}


id: GO:0015986
data:
  {"annotated_genes":["SJAG_00133","SJAG_07003","SJAG_MIT37","SJAG_00915","SJAG_00438","SJAG_04122","SJAG_05204","SJAG_MIT09","SJAG_02105","SJAG_00836","SJAG_04422","SJAG_00542","SJAG_03925","SJAG_MIT15","SJAG_02598","SJAG_00985","SJAG_03114","SJAG_02564"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118306],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[103966,95181,94210,93627,89471,103995,108118,119361,119373,109099,119367,108210,102133,105330,93196,116147,103349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ATP driven by transport of protons across a membrane to generate an electrochemical gradient (proton-motive force).","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP biosynthetic process","termid":"GO:0006754"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"proton motive force-driven ATP synthesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP synthesis coupled proton transport","type":"related"},{"name":"chemiosmosis","type":"broad"}],"termid":"GO:0015986","terms_by_termid":{"GO:0042776":null,"GO:1905707":null}}


id: GO:0034367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss, or modification of macromolecules within a complex, resulting in the alteration of an existing complex.","definition_xrefs":["GOC:mtg_mpo","GOC:mah","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-containing complex remodeling","synonyms":[{"name":"macromolecular complex remodeling","type":"related"},{"name":"macromolecular complex remodelling","type":"related"},{"name":"protein-containing complex remodelling","type":"exact"}],"termid":"GO:0034367"}


id: GO:1990984
data:
  {"annotated_genes":["SJAG_00892"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103413],"is_not":false,"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from one or more positions within a tRNA molecule.","definition_xrefs":["PMID:27745969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidative RNA demethylase activity","termid":"GO:0035515"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00892":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140101","GO:0016491","GO:0140098","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tRNA demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990984","terms_by_termid":{"GO:1990984":null}}


id: PBO:0042609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 9","termid":"PBO:0042609"}


id: PBO:0083827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of U3-containing 90S preribosome; involved in production of 18S rRNA and assembly of small ribosomal subunit; also part of pre-40S ribosome and required for its export into cytoplasm; binds RNA and contains pumilio domain","termid":"PBO:0083827"}


id: MONDO:0056799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the layer of synovial tissue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synovium disorder","secondary_identifiers":["MEDGEN:538212","ICD9:727.89","ICD9:727.9","SCTID:3519007","UMLS:C0263945"],"synonyms":[{"name":"disease of layer of synovial tissue","type":"exact"},{"name":"disease or disorder of layer of synovial tissue","type":"exact"},{"name":"disorder of layer of synovial tissue","type":"exact"},{"name":"disorder of synovium","type":"exact"},{"name":"layer of synovial tissue disease","type":"exact"},{"name":"layer of synovial tissue disease or disorder","type":"exact"}],"termid":"MONDO:0056799","xrefs":{"Monarch":{"xref_id":"0056799"}}}


id: MONDO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tungiasis (obsolete MONDO:0000300)","termid":"MONDO:0000300","xrefs":{"Monarch":{"xref_id":"0000300"}}}


id: MONDO:0005385
data:
  {"annotated_genes":["SJAG_02959","SJAG_01181","SJAG_04745","SJAG_00495","SJAG_02580","SJAG_03453","SJAG_01344","SJAG_00364","SJAG_00993","SJAG_02977","SJAG_02063","SJAG_02218","SJAG_02286","SJAG_03081","SJAG_02582","SJAG_00210","SJAG_02648","SJAG_00169","SJAG_02342","SJAG_03703","SJAG_02431","SJAG_02923","SJAG_02485","SJAG_03785","SJAG_00737","SJAG_03145","SJAG_03258","SJAG_05213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87424,87425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007568"},{"annotations":[85413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012730"},{"annotations":[87004,87005,87003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013768"},{"annotations":[86052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007154"},{"annotations":[86415,86416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010829"},{"annotations":[86282,86283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014768"},{"annotations":[86174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[87276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010557"},{"annotations":[87652,87653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012011"},{"annotations":[87663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007781"},{"annotations":[86805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013806"},{"annotations":[85972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007672"},{"annotations":[87277,87279,87278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008895"},{"annotations":[87262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013458"},{"annotations":[86804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[86828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[86307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013542"},{"annotations":[86680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011257"},{"annotations":[87258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013452"},{"annotations":[87609,87610,87611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[86129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[86999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[86796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[87412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009796"},{"annotations":[87421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009329"}]},"cv_name":"mondo","definition":"A general term used to describe any disease affecting blood vessels]. It includes vascular abnormalities caused by degenerative, metabolic and inflammatory conditions, embolic diseases, coagulative disorders, and functional disorders such as posteri or reversible encephalopathy syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder","termid":"MONDO:0004995"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00210":null,"SJAG_00364":null,"SJAG_00495":null,"SJAG_00737":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01344":null,"SJAG_02063":null,"SJAG_02218":null,"SJAG_02286":null,"SJAG_02342":null,"SJAG_02431":null,"SJAG_02485":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02648":null,"SJAG_02923":null,"SJAG_02959":null,"SJAG_02977":null,"SJAG_03081":null,"SJAG_03145":null,"SJAG_03258":null,"SJAG_03453":null,"SJAG_03703":null,"SJAG_03785":null,"SJAG_04745":null,"SJAG_05213":null},"genotype_count":0,"is_obsolete":false,"name":"vascular disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C35117","SCTID:27550009","NANDO:2100294","MESH:D014652","UMLS:C0042373","ICD9:442.9","ICD10CM:I70-I79","ICD10CM:I00-I99","MEDGEN:22621","DOID:178","EFO:0004264"],"synonyms":[{"name":"disease of vasculature","type":"exact"},{"name":"disease or disorder of vasculature","type":"exact"},{"name":"disorder of vasculature","type":"exact"},{"name":"vascular disorder","type":"exact"},{"name":"vascular tissue disease","type":"exact"},{"name":"vasculature disease","type":"exact"},{"name":"vasculature disease or disorder","type":"exact"},{"name":"vasculopathy","type":"related"}],"termid":"MONDO:0005385","terms_by_termid":{"MONDO:0007154":null,"MONDO:0007568":null,"MONDO:0007672":null,"MONDO:0007781":null,"MONDO:0007918":null,"MONDO:0008104":null,"MONDO:0008895":null,"MONDO:0009329":null,"MONDO:0009796":null,"MONDO:0010557":null,"MONDO:0010829":null,"MONDO:0011257":null,"MONDO:0012011":null,"MONDO:0012371":null,"MONDO:0012730":null,"MONDO:0013186":null,"MONDO:0013452":null,"MONDO:0013458":null,"MONDO:0013542":null,"MONDO:0013644":null,"MONDO:0013768":null,"MONDO:0013805":null,"MONDO:0013806":null,"MONDO:0014768":null,"MONDO:0033669":null},"xrefs":{"Monarch":{"xref_id":"0005385"}}}


id: PBO:0066407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELB proto-oncogene, NF-kB subunit","termid":"PBO:0066407"}


id: GO:2000035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stem cell division.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"regulates","term_name":"stem cell division","termid":"GO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stem cell division","synonyms":[{"name":"regulation of stem cell renewal","type":"exact"}],"termid":"GO:2000035"}


id: GO:0052149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in host peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host peptidase activity (obsolete GO:0052149)","synonyms":[{"name":"modulation by symbiont of host protease activity","type":"narrow"}],"termid":"GO:0052149"}


id: PBO:0005091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S8 (predicted)","termid":"PBO:0005091"}


id: GO:0051865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein autoubiquitination","synonyms":[{"name":"protein auto-ubiquitination","type":"exact"},{"name":"protein auto-ubiquitinylation","type":"exact"},{"name":"protein autoubiquitinylation","type":"exact"},{"name":"protein self-ubiquitination","type":"exact"},{"name":"protein self-ubiquitinylation","type":"exact"}],"termid":"GO:0051865"}


id: PBO:0066545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 9","termid":"PBO:0066545"}


id: PBO:0036183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036183"}


id: FYPO:0006243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation is abnormal over short (less than 90 kb) ranges within a chromosome arm.","definition_xrefs":["PomBase:mah","PMID:28825727"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal short range intra-arm mitotic chromosome condensation during interphase (obsolete FYPO:0006243)","synonyms":[{"name":"abnormal short range intra-arm chromosome condensation during interphase of mitotic cell cycle","type":"exact"},{"name":"abnormal short range intra-arm chromosome condensation during mitotic interphase","type":"exact"},{"name":"abnormal short range intra-arm mitotic chromosome condensation during interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0006243"}


id: MONDO:0007637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fuchs' endothelial dystrophy in which the cause of the disease is a mutation in the COL8A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fuchs' endothelial dystrophy","termid":"MONDO:0005321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal dystrophy, Fuchs endothelial, 1","secondary_identifiers":["MESH:C535478","GARD:18216","OMIM:136800","UMLS:C1850959","MEDGEN:338172"],"synonyms":[{"name":"COL8A2 Fuchs' endothelial dystrophy","type":"exact"},{"name":"FECD1","type":"related"},{"name":"Fuchs' endothelial dystrophy caused by mutation in COL8A2","type":"exact"},{"name":"corneal dystrophy, Fuchs endothelial, 1","type":"exact"},{"name":"corneal dystrophy, Fuchs endothelial, early-onset","type":"related"},{"name":"corneal dystrophy, Fuchs endothelial, type 1","type":"exact"}],"termid":"MONDO:0007637","xrefs":{"Monarch":{"xref_id":"0007637"}}}


id: GO:1990699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a hydrolase reaction that removes a palmitoleyl moiety, a 16-carbon monounsaturated fatty acid (C16:1), from some substrate.","definition_xrefs":["PMID:25731175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"palmitoleyl hydrolase activity","termid":"GO:1990699"}


id: GO:0000127
data:
  {"annotated_genes":["SJAG_02815","SJAG_03354","SJAG_01827","SJAG_03546","SJAG_05339","SJAG_00585"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70167,71466,72444,74128,76831,88528],"is_not":false,"summary":null,"term":"GO:0000127"}]},"cv_name":"cellular_component","definition":"A heterotrimeric transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIC contains three conserved subunits that associate with the proximal Pol III promoter element, and additional subunits that associate with sequence elements downstream of the promoter and are more diverged among species. It also functions as a boundary element to partition genome content into distinct domains outside Pol III promoter regions.","definition_xrefs":["GOC:vw","GOC:mah","PMID:11433012","PMID:16751097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00585":null,"SJAG_01827":null,"SJAG_02815":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transcription factor TFIIIC complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000127","terms_by_termid":{"GO:0000127":null}}


id: MONDO:0020812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The result of pathological changes in the hard tissue of a tooth caused by carious lesions, mechanical factors, or trauma, which render the pulp susceptible to bacterial invasion from the external environment.","definition_xrefs":["MESH:D003789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dental pulp disorder","termid":"MONDO:0003394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exposure, dental pulp","secondary_identifiers":["MEDGEN:41473","UMLS:C0011406"],"synonyms":[{"name":"DENT PULP EXPOSURE","type":"related"},{"name":"Dental Pulp Exposure","type":"related"},{"name":"EXPOSURE DENT PULP","type":"related"},{"name":"Exposure of tooth pulp","type":"related"},{"name":"Exposure, Dental Pulp","type":"related"},{"name":"PULP EXPOSURE DENT","type":"related"},{"name":"Pulp Exposure, Dental","type":"related"}],"termid":"MONDO:0020812","xrefs":{"Monarch":{"xref_id":"0020812"}}}


id: FYPO:0004630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during meiotic cell cycle","synonyms":[{"name":"decreased RNA accumulation during meiotic cell cycle","type":"related"},{"name":"decreased transcript level during meiotic cell cycle","type":"exact"},{"name":"reduced RNA level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004630"}


id: MONDO:0006327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ocular sebaceous carcinoma is a rare condition and accounts for 1% to 5.5% of eyelid malignancies and is the third most common eyelid malignancy after basal cell and squamous cell carcinoma. It usually affects elderly women, has a high rate of local recurrence, and a tendency to regional and distant metastases.","definition_xrefs":["EFO:1000405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye carcinoma","termid":"MONDO:0002466"},{"relation_name":"is_a","term_name":"sebaceous adenocarcinoma","termid":"MONDO:0006962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"ocular sebaceous carcinoma","secondary_identifiers":["UMLS:C1709308","MEDGEN:317974","NCIT:C43340"],"synonyms":[{"name":"eye sebaceous carcinoma","type":"exact"},{"name":"ocular sebaceous carcinoma","type":"exact"}],"termid":"MONDO:0006327","xrefs":{"Monarch":{"xref_id":"0006327"}}}


id: GO:0045558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of TRAIL-R1 (TNF-related apoptosis inducing ligand receptor 1), which engages a caspase-dependent apoptotic pathway.","definition_xrefs":["PMID:9311998","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete TRAIL receptor 1 biosynthetic process (obsolete GO:0045558)","synonyms":[{"name":"TRAIL receptor 1 anabolism","type":"exact"},{"name":"TRAIL receptor 1 biosynthesis","type":"exact"},{"name":"TRAIL receptor 1 formation","type":"exact"},{"name":"TRAIL receptor 1 synthesis","type":"exact"},{"name":"tumor necrosis factor receptor superfamily member 10A biosynthetic process","type":"exact"}],"termid":"GO:0045558"}


id: PR:P20772
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trifunctional purine biosynthetic protein adenosine-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03581","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional purine biosynthetic protein ADE1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.01","secondary_identifiers":["UniProtKB:P20772"],"synonyms":[{"name":"Spom972h-GART","type":"exact"}],"termid":"PR:P20772"}


id: MONDO:0012769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 14","secondary_identifiers":["GARD:15537","MEDGEN:393832","UMLS:C2677772","MESH:C567448","OMIM:611958"],"synonyms":[{"name":"HPC14","type":"exact"},{"name":"prostate cancer, hereditary, 14","type":"exact"}],"termid":"MONDO:0012769","xrefs":{"Monarch":{"xref_id":"0012769"}}}


id: PBO:0058033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4254","termid":"PBO:0058033"}


id: PBO:0003616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutathione reductase Pgr1","termid":"PBO:0003616"}


id: PBO:0073008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 8","termid":"PBO:0073008"}


id: GO:0000316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of sulfite into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"sulfite transmembrane transport","synonyms":[{"name":"sulphite transport","type":"exact"}],"termid":"GO:0000316"}


id: PBO:0078521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 11","termid":"PBO:0078521"}


id: GO:0034293
data:
  {"annotated_genes":["SJAG_00405","SJAG_00114","SJAG_03746","SJAG_01483","SJAG_01769","SJAG_04868","SJAG_04615","SJAG_02169","SJAG_04275","SJAG_00974","SJAG_00971","SJAG_04271","SJAG_04781","SJAG_04853","SJAG_02718","SJAG_03013","SJAG_02529","SJAG_03536","SJAG_04859","SJAG_03557","SJAG_02248","SJAG_04236","SJAG_03250","SJAG_04140","SJAG_04010","SJAG_00993","SJAG_01017","SJAG_03483","SJAG_04080","SJAG_05309","SJAG_02241","SJAG_00821","SJAG_04922","SJAG_00826","SJAG_03915","SJAG_04901","SJAG_00486","SJAG_01662","SJAG_03090","SJAG_02712","SJAG_04184","SJAG_02320","SJAG_01321","SJAG_04483","SJAG_03587","SJAG_04238","SJAG_03057","SJAG_04470","SJAG_03688","SJAG_00663","SJAG_01531"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97266,96850,105443,113017,101047,111818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[94358,111623],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[94802],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[92110,88553,90588,89045],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[73430],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[118083,118091,104485,109380,114387],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[73431,91841,105295],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[107695,102025,105609,114235,119317,118835,97914,119135,95707,99152,97877,100225,91631,110422],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[114236,108026,100158,104443,97878,97200,92632,103232,100157,107148],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[111507],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[102605],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[91068],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[92529],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[106333,94843,100159,116273,100160,100440],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The formation of spores derived from the products of meiosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"sporulation","termid":"GO:0043934"},{"relation_name":"part_of","term_name":"meiotic cell cycle","termid":"GO:0051321"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_02718":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"sexual sporulation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"meiotic spore formation","type":"exact"},{"name":"meiotic sporulation","type":"exact"},{"name":"sexual spore formation","type":"exact"}],"termid":"GO:0034293","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: GO:0097230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another as a result of a potassium ion stimulus.","definition_xrefs":["GOC:pf","PMID:19363786","PMID:21239624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"},{"relation_name":"part_of","term_name":"cellular response to potassium ion","termid":"GO:0035865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility in response to potassium ion","synonyms":[{"name":"K+ facilitation of cell motility","type":"exact"},{"name":"potassium ion facilitation of cell motility","type":"exact"}],"termid":"GO:0097230"}


id: PBO:0082970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein that regulates protein phosphatase 1 Glc7p; overexpression relocalizes Glc7p from the nucleus and prevents chromosome segregation; may interact with ribosomes, based on co-purification experiments; GIP3 has a paralog, HER1, that arose from the whole genome duplication","termid":"PBO:0082970"}


id: PBO:0045225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C13","termid":"PBO:0045225"}


id: PATO:0000464
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of not being clearly visible.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conspicuousness","termid":"PATO:0001998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inconspicuous","synonyms":[{"name":"faint","type":"related"}],"termid":"PATO:0000464"}


id: PBO:0056040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphotoxin beta receptor","termid":"PBO:0056040"}


id: MONDO:0015753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cap myopathy is a very rare congenital myopathy presenting a weakness of facial and respiratory muscles associated with craniofacial and thoracic deformities, as well as weakness of limb proximal and distal muscles. Onset is at birth or in childhood, weakness progression is slow but may lead to a severe and even fatal prognosis.","definition_xrefs":["Orphanet:171881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-actinopathy","termid":"MONDO:0100084"},{"relation_name":"is_a","term_name":"TPM3-related myopathy","termid":"MONDO:0100108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"cap myopathy","secondary_identifiers":["MESH:C579969","MEDGEN:777197","SCTID:703532002","GARD:11915","UMLS:C3710589"],"synonyms":[{"name":"Cap disease","type":"exact"},{"name":"congenital myopathy with caps","type":"related"}],"termid":"MONDO:0015753","xrefs":{"Monarch":{"xref_id":"0015753"}}}


id: PBO:0016533
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by canine rab5","termid":"PBO:0016533"}


id: MONDO:0015120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare acquired eye disease (obsolete MONDO:0015120)","secondary_identifiers":["Orphanet:101949"],"termid":"MONDO:0015120","xrefs":{"Monarch":{"xref_id":"0015120"}}}


id: MONDO:0020276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pigmentation disorder with eye involvement, excluding albinism (obsolete MONDO:0020276)","secondary_identifiers":["Orphanet:98708"],"termid":"MONDO:0020276","xrefs":{"Monarch":{"xref_id":"0020276"}}}


id: GO:0075045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont haustorium formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"regulates","term_name":"formation of haustorium for nutrient acquisition","termid":"GO:0052094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of formation by symbiont of haustorium for nutrient acquisition from host","termid":"GO:0075045"}


id: PBO:0058562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6504","termid":"PBO:0058562"}


id: PATO:0002453
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer bring gradually worn away.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eroding","termid":"PATO:0002453"}


id: GO:0008378
data:
  {"annotated_genes":["SJAG_04401","SJAG_04095","SJAG_03149","SJAG_02996","SJAG_00183","SJAG_01972","SJAG_03150","SJAG_03790","SJAG_03871"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99105,99108,118355,99106,99107,99247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031278"},{"annotations":[111017,111023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001962"},{"annotations":[106089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_01972":null,"SJAG_02996":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04095":null,"SJAG_04401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1964501"],"termid":"GO:0008378","terms_by_termid":{"GO:0001962":null,"GO:0031278":null,"GO:0047220":null}}


id: PBO:0082270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-activated S/T protein kinase; complexes with Snf4p and a Sip1p/Sip2p/Gal83p family member; required for glucose-repressed gene transcription, heat shock, sporulation, and peroxisome biogenesis; active form involved in mitotic spindle alignment in non-limiting glucose; regulates Hxk2p nucleocytoplasmic shuttling; regulates filamentous growth and acts as a non-canonical GEF-activating Arf3p during invasive growth; sumoylation inhibits Snf1p, targeting it for Ub-ligase mediated destruction","termid":"PBO:0082270"}


id: PBO:0085186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two isoforms of the gamma subunit of eEF1B; stimulates the release of GDP from eEF1A (Tef1p/Tef2p) post association with the ribosomal complex with eEF1Balpha subunit; nuclear protein required for transcription of MXR1; binds the MXR1 promoter in the presence of other nuclear factors; binds calcium and phospholipids","termid":"PBO:0085186"}


id: MOD:01780
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-(beta-lysyl)-L-5-hydroxylysine by formation of an isopeptide bond between the carboxyl group of a free beta-lysine and the N6-amino group of a peptidyl L-lysine.","definition_xrefs":["RESID:AA0531","PubMed:20729861","PubMed:18201202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-hydroxy-L-lysine","termid":"MOD:00037"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-(beta-lysyl)-L-5-hydroxylysine","synonyms":[{"name":"(2S)-2-amino-6-([(3R)-3,6-diaminohexanoyl]amino)-5-hydroxyhexanoic acid","type":"exact"},{"name":"5-hydroxy-N6-(beta-lysyl)-L-lysine","type":"exact"},{"name":"5-hydroxy-N6-[(3R)-beta-lysyl]lysine","type":"exact"},{"name":"EF-P lysine derivative","type":"exact"},{"name":"MOD_RES N6-(3,6-diaminohexanoyl)-5-hydroxylysine","type":"exact"},{"name":"N6-[(3R)-3,6-diaminohexanoyl]-L-5-hydroxylysine","type":"exact"},{"name":"lysyl spermidine derivative [misidentification]","type":"exact"}],"termid":"MOD:01780"}


id: GO:0048212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which Golgi vesicle coat proteins are depolymerized, and released for reuse.","definition_xrefs":["GOC:jid","ISBN:0716731363","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle uncoating","termid":"GO:0072319"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"Golgi vesicle uncoating","synonyms":[{"name":"Golgi vesicle coat depolymerization","type":"exact"},{"name":"Golgi vesicle coat protein depolymerization","type":"exact"},{"name":"Golgi-derived vesicle uncoating","type":"exact"},{"name":"dictyosome vesicle coat depolymerization","type":"narrow"}],"termid":"GO:0048212"}


id: GO:0030878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid gland development","termid":"GO:0030878"}


id: MONDO:0001130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary lymphoma that affects the nasal cavity and the bulk of the tumor is in this anatomic area.","definition_xrefs":["NCIT:C6074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasal cavity cancer","termid":"MONDO:0001128"},{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"nasal cavity lymphoma","secondary_identifiers":["UMLS:C1334921","MEDGEN:233747","DOID:10813"],"synonyms":[{"name":"lymphoma of nasal cavity","type":"exact"},{"name":"lymphoma of the nasal cavity","type":"exact"},{"name":"nasal cavity lymphoma","type":"exact"},{"name":"primary nasal cavity lymphoma","type":"exact"}],"termid":"MONDO:0001130","xrefs":{"Monarch":{"xref_id":"0001130"}}}


id: GO:0003724
data:
  {"annotated_genes":["SJAG_03479","SJAG_00986","SJAG_03533","SJAG_04772","SJAG_04669","SJAG_02382","SJAG_03923","SJAG_00798","SJAG_02558","SJAG_16455","SJAG_03193","SJAG_04118","SJAG_03077","SJAG_02295","SJAG_04081","SJAG_00786","SJAG_04230","SJAG_04480","SJAG_01315","SJAG_05025","SJAG_01182","SJAG_00887","SJAG_02242","SJAG_00597","SJAG_02835","SJAG_02686","SJAG_03157","SJAG_00616","SJAG_02991","SJAG_00898","SJAG_01152","SJAG_04589","SJAG_02879","SJAG_02061","SJAG_04650","SJAG_03730","SJAG_04974","SJAG_03886","SJAG_05276","SJAG_02287","SJAG_01499","SJAG_00583","SJAG_03897"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57177,57677,58058,58854,60172,60572,61581,62544,63861,65373,67883,69645,72163,72187,72358,74310,74469,75665,75789,75920,75931,76470,77515,79057,79390,79568,79953,80729,88122,96333,99663,100958,101730,103448,103848,106101,107594,108106,115730,116667,118974],"is_not":false,"summary":null,"term":"GO:0003724"},{"annotations":[74391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034458"},{"annotations":[100210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032574"}]},"cv_name":"molecular_function","definition":"Unwinding of an RNA helix, driven by ATP hydrolysis.","definition_xrefs":["PMID:19158098","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helicase activity","termid":"GO:0004386"},{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on RNA","termid":"GO:0008186"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00583":null,"SJAG_00597":null,"SJAG_00616":null,"SJAG_00786":null,"SJAG_00798":null,"SJAG_00887":null,"SJAG_00898":null,"SJAG_00986":null,"SJAG_01152":null,"SJAG_01182":null,"SJAG_01315":null,"SJAG_01499":null,"SJAG_02061":null,"SJAG_02242":null,"SJAG_02287":null,"SJAG_02295":null,"SJAG_02382":null,"SJAG_02558":null,"SJAG_02686":null,"SJAG_02835":null,"SJAG_02879":null,"SJAG_02991":null,"SJAG_03077":null,"SJAG_03157":null,"SJAG_03193":null,"SJAG_03479":null,"SJAG_03533":null,"SJAG_03730":null,"SJAG_03886":null,"SJAG_03897":null,"SJAG_03923":null,"SJAG_04081":null,"SJAG_04118":null,"SJAG_04230":null,"SJAG_04480":null,"SJAG_04589":null,"SJAG_04650":null,"SJAG_04669":null,"SJAG_04772":null,"SJAG_04974":null,"SJAG_05025":null,"SJAG_05276":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0140098","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"RNA helicase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.4.13","Reactome:R-HSA-9770129","GO:0004004","MetaCyc:RXN-11109","Reactome:R-HSA-72647","Reactome:R-HSA-9770131","Reactome:R-HSA-9770142","Reactome:R-HSA-9770145","Reactome:R-HSA-9770141"],"synonyms":[{"name":"ATP-dependent RNA helicase activity","type":"exact"}],"termid":"GO:0003724","terms_by_termid":{"GO:0003724":null,"GO:0032574":null,"GO:0034458":null}}


id: PBO:0044359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 46","termid":"PBO:0044359"}


id: PBO:0003683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan Meu25","termid":"PBO:0003683"}


id: PBO:0043438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondromodulin","termid":"PBO:0043438"}


id: PR:Q10133
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rho2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein rho2 (Schizosaccharomyces pombe)","termid":"PR:000050250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16.01","synonyms":[{"name":"Spom972h-rho2","type":"exact"}],"termid":"PR:Q10133"}


id: FYPO:0008349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-nucleotidase activity is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal 5'-nucleotidase activity","termid":"FYPO:0008349"}


id: GO:1903938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acrylamide stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:16292499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to acrylamide","termid":"GO:1903937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acrylamide","termid":"GO:1903938"}


id: SO:0000343
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence, aligned to another sequence with some statistical significance, using an algorithm such as BLAST or SIM4.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"match","termid":"SO:0000343"}


id: PBO:0058717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6845","termid":"PBO:0058717"}


id: PBO:0091457
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of A Kinase","termid":"PBO:0091457"}


id: PBO:0011404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell,_anatomy,_cellular_component,_biological_process_and_developmental_stage","termid":"PBO:0011404"}


id: GO:0043526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss.","definition_xrefs":["PMID:11909981","PMID:15905876","MSH:D017209","GOC:mtg_apoptosis","PMID:10208444"],"gene_count":0,"genotype_count":0,"name":"obsolete neuroprotection (obsolete GO:0043526)","secondary_identifiers":["Wikipedia:Neuroprotection"],"synonyms":[{"name":"neuroprotection","type":"exact"}],"termid":"GO:0043526"}


id: PATO:0000965
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality of inhering in a bearer by virtue of the correspondence in size, shape, and relative position of the bearer's parts on opposite sides of a dividing line or median plane or about a center or axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regular spatial pattern","termid":"PATO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symmetry","termid":"PATO:0000965"}


id: FYPO:0000300
data:
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id: MONDO:0014570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the ADCY6 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 8","secondary_identifiers":["OMIM:616287","GARD:18565","MEDGEN:896058","UMLS:C4225385"],"synonyms":[{"name":"ADCY6 lethal congenital contracture syndrome","type":"exact"},{"name":"LCCS8","type":"related"},{"name":"lethal congenital contracture syndrome 8","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in ADCY6","type":"exact"},{"name":"lethal congenital contracture syndrome type 8","type":"exact"}],"termid":"MONDO:0014570","xrefs":{"Monarch":{"xref_id":"0014570"}}}


id: GO:0097083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a vascular smooth muscle cell regardless of its environment; upon determination, the cell fate cannot be reversed. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell fate determination","termid":"GO:0007521"},{"relation_name":"part_of","term_name":"vascular associated smooth muscle cell fate commitment","termid":"GO:0097081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell fate determination","synonyms":[{"name":"vascular smooth muscle cell fate determination","type":"exact"}],"termid":"GO:0097083"}


id: PBO:0116578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Winged helix repair factor Whr1","termid":"PBO:0116578"}


id: PBO:0041999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 50","termid":"PBO:0041999"}


id: PBO:0090306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-ribosomal factor","termid":"PBO:0090306"}


id: PBO:0028129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_trapoxin_A","termid":"PBO:0028129"}


id: FYPO:0004606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the meiotic cell cycle is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during meiotic cell cycle","synonyms":[{"name":"normal cellular protein level during meiotic cell cycle","type":"exact"},{"name":"normal protein accumulation during meiotic cell cycle","type":"related"}],"termid":"FYPO:0004606"}


id: PBO:0044963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 7C","termid":"PBO:0044963"}


id: GO:0070431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand (such as a bacterial peptidoglycan) to a cytoplasmic nucleotide-binding oligomerization domain containing 2 (NOD2) protein receptor, and ending with regulation of a downstream cellular process.","definition_xrefs":["PMID:18585455","GOC:add","PMID:17944960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"nucleotide-binding oligomerization domain containing 2 signaling pathway","synonyms":[{"name":"NOD2 signaling pathway","type":"exact"},{"name":"nucleotide-binding oligomerization domain containing 2 signalling pathway","type":"exact"}],"termid":"GO:0070431"}


id: PBO:0085417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; involved in resistance to azole drugs such as ketoconazole and fluconazole","termid":"PBO:0085417"}


id: GO:0045708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salivary gland determination in a larval organism.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of salivary gland boundary specification","termid":"GO:0045704"},{"relation_name":"regulates","term_name":"larval salivary gland boundary specification","termid":"GO:0007433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of larval salivary gland boundary specification","synonyms":[{"name":"regulation of larval salivary gland determination","type":"exact"}],"termid":"GO:0045708"}


id: PBO:0027067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_metabolic_process","termid":"PBO:0027067"}


id: PBO:0041865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 10","termid":"PBO:0041865"}


id: GO:0033104
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of proteins that permits the transfer of proteins into the extracellular milieu or directly into host cells via the type VI secretion system. Proteins secreted by this complex do not require an N-terminal signal sequence.","definition_xrefs":["PMID:16432199","PMID:16763151","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"type VI protein secretion system complex","synonyms":[{"name":"T6SS complex","type":"exact"}],"termid":"GO:0033104"}


id: PBO:0070700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 4","termid":"PBO:0070700"}


id: PBO:0031207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_actin_cortical_patch_localization","termid":"PBO:0031207"}


id: PBO:0061744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin 3","termid":"PBO:0061744"}


id: PBO:0079691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 4B","termid":"PBO:0079691"}


id: PBO:0038995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AE binding protein 1","termid":"PBO:0038995"}


id: PBO:0040929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 like","termid":"PBO:0040929"}


id: FYPO:0001280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to oxidative stress is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during cellular response to oxidative stress","synonyms":[{"name":"decreased RNA accumulation during cellular response to oxidative stress","type":"related"},{"name":"decreased RNA level during cellular response to DEM","type":"narrow"},{"name":"decreased RNA level during cellular response to diethyl maleate","type":"narrow"},{"name":"decreased RNA level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"decreased RNA level during oxidative stress response","type":"exact"},{"name":"decreased mRNA level during cellular response to oxidative stress","type":"narrow"},{"name":"decreased transcript level during cellular response to oxidative stress","type":"exact"},{"name":"reduced RNA level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0001280"}


id: GO:0048027
data:
  {"annotated_genes":["SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100782],"is_not":false,"summary":null,"term":"GO:0048027"}]},"cv_name":"molecular_function","definition":"Binding to an mRNA molecule at its 5' untranslated region.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"mRNA 5'-UTR binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mRNA 5' UTR binding","type":"exact"}],"termid":"GO:0048027","terms_by_termid":{"GO:0048027":null}}


id: GO:0031473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class III myosin; myosin III is monomeric and has an N terminal kinase domain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0003674","GO:0008092","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"myosin III binding","termid":"GO:0031473"}


id: PBO:0080962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 5","termid":"PBO:0080962"}


id: MONDO:0011671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Huntington disease-like 2 (HDL2) is a severe neurodegenerative disorder considered part of the neuroacanthocytosis syndromes characterized by a triad of movement, psychiatric, and cognitive abnormalities.","definition_xrefs":["Orphanet:98934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroacanthocytosis","termid":"MONDO:0016987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Huntington disease-like 2","secondary_identifiers":["MEDGEN:341120","DOID:0090104","MESH:C564708","OMIM:606438","UMLS:C1847987","SCTID:721228006","GARD:16874"],"synonyms":[{"name":"HDL2","type":"exact"},{"name":"Huntington disease-like 2","type":"exact"},{"name":"Huntington disease-like type 2","type":"exact"},{"name":"Huntington's disease-like 2","type":"related"}],"termid":"MONDO:0011671","xrefs":{"Monarch":{"xref_id":"0011671"}}}


id: PBO:0041351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 3 precursor pseudogene","termid":"PBO:0041351"}


id: GO:0050018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an L-amino acid + H2O + NAD+ = a 2-oxo acid + NH3 + NADH.","definition_xrefs":["EC:1.4.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-amino-acid dehydrogenase activity","secondary_identifiers":["RHEA:10396","MetaCyc:L-AMINO-ACID-DEHYDROGENASE-RXN"],"synonyms":[{"name":"L-amino-acid:NAD+ oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0050018"}


id: PBO:0090249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic phenylalanine-tRNA ligase alpha subunit Frs2","termid":"PBO:0090249"}


id: FYPO:0001724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GTP binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal GTP binding","termid":"FYPO:0001528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased GTP binding","termid":"FYPO:0001724"}


id: MONDO:0018548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute poisoning with a membrane-stabilizing effect is potentially life-threatening. The principle drugs involved are tricyclic antidepressants, chloroquine, some types of beta blockers, class IA antiarrhythmics, carbamazepin and cocaine.","definition_xrefs":["Orphanet:43119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute poisoning by drugs with membrane-stabilizing effect","termid":"MONDO:0018548","xrefs":{"Monarch":{"xref_id":"0018548"}}}


id: GO:1900386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of flavonol biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of flavonoid biosynthetic process","termid":"GO:0009963"},{"relation_name":"is_a","term_name":"regulation of flavonol biosynthetic process","termid":"GO:1900384"},{"relation_name":"positively_regulates","term_name":"flavonol biosynthetic process","termid":"GO:0051555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of flavonol biosynthetic process","synonyms":[{"name":"activation of flavonol biosynthetic process","type":"narrow"},{"name":"up regulation of flavonol biosynthetic process","type":"exact"},{"name":"up-regulation of flavonol biosynthetic process","type":"exact"},{"name":"upregulation of flavonol biosynthetic process","type":"exact"}],"termid":"GO:1900386"}


id: GO:0060872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the semicircular canal from its initial formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"inner ear development","termid":"GO:0048839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal development","termid":"GO:0060872"}


id: RO:0002624
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"},{"relation_name":"is_a","term_name":"visits","termid":"RO:0002618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lays_eggs_in","termid":"RO:0002624"}


id: PBO:0058276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4653","termid":"PBO:0058276"}


id: PBO:0043905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich secretory protein LCCL domain containing 2","termid":"PBO:0043905"}


id: PBO:0044062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 8","termid":"PBO:0044062"}


id: PBO:0063617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2","termid":"PBO:0063617"}


id: PBO:0031193
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_double-strand_break_repair","termid":"PBO:0031193"}


id: FYPO:0004588
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitosis takes place abnormally after the cell has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype following normal mitosis","termid":"FYPO:0004593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000337"],"is_obsolete":false,"name":"abnormal mitosis following normal mitosis","synonyms":[{"name":"abnormal mitosis following normal mitosis and interphase","type":"exact"},{"name":"abnormal mitosis following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"abnormal mitosis following normal mitosis during vegetative growth","type":"exact"},{"name":"abnormal mitotic nuclear division following normal mitotic nuclear division","type":"exact"},{"name":"abnormal nuclear division following normal nuclear division during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004588"}


id: PBO:0041183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 3","termid":"PBO:0041183"}


id: MONDO:0010710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of Pierre Robin sequence (retrognathia, cleft palate and glossoptosis) with facial dysmorphism (high forehead with frontal bossing) and digital anomalies (tapering fingers, hyperconvex nails, clinodactyly of the fifth fingers and short distal phalanges, finger-like thumbs and easily subluxated first metacarpophalangeal joints).Growth and mental development were normal.","definition_xrefs":["Orphanet:2888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pierre Robin syndrome-faciodigital anomaly syndrome","secondary_identifiers":["MEDGEN:443969","SCTID:723461007","MESH:C535926","OMIM:311895","GARD:1274","UMLS:C2931064"],"synonyms":[{"name":"Chitayat Meunier Hodgkinson syndrome","type":"related"},{"name":"Chitayat-Meunier-Hodgkinson syndrome","type":"exact"},{"name":"Pierre Robin sequence with facial and digital anomalies","type":"related"},{"name":"Pierre Robin sequence-faciodigital anomaly syndrome","type":"exact"},{"name":"Pierre Robin syndrome, faciodigital anomaly","type":"related"},{"name":"Robin sequence with facial and digital anomalies","type":"related"}],"termid":"MONDO:0010710","xrefs":{"Monarch":{"xref_id":"0010710"}}}


id: PBO:0079774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose 6-dehydrogenase","termid":"PBO:0079774"}


id: PBO:0087244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine-rich, hydrophilic protein; overexpression suppresses growth defects of hap2, hap3, and hap4 mutants; expression is under glucose control; cotranscribed with NAM7 in a cyp1 mutant; ISF1 has a paralog, MBR1, that arose from the whole genome duplication","termid":"PBO:0087244"}


id: FYPO:0004868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ionizing radiation during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to ionizing radiation during vegetative growth","termid":"FYPO:0000267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to ionizing radiation during mitotic G1 phase","synonyms":[{"name":"decreased growth during cellular response to ionizing radiation during mitotic G1 phase","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to ionizing radiation during mitotic G1 phase","type":"exact"},{"name":"hypersensitive to ionizing radiation during mitotic G1 phase","type":"exact"},{"name":"sensitive to IR during mitotic G1 phase","type":"exact"},{"name":"sensitive to gamma irradiation during mitotic G1 phase","type":"narrow"},{"name":"sensitive to gamma radiation during mitotic G1 phase","type":"narrow"},{"name":"sensitive to ionizing radiation during G1 phase of mitotic cell cycle","type":"exact"},{"name":"sensitive to ionizing radiation during mitotic G1 phase during mitotic cell cycle","type":"related"},{"name":"sensitive to ionizing radiation during mitotic G1 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004868"}


id: PBO:0088908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase complex subunit Npr3","termid":"PBO:0088908"}


id: PBO:0030259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_chloramphenicol","termid":"PBO:0030259"}


id: MONDO:0001167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of cerebral palsy characterized by spasticity and hypertonia of the lower extremities bilaterally, particularly the legs, hips, and pelvis; this is the most common (70%) form of cerebral palsy.","definition_xrefs":["NCIT:C34781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spastic cerebral palsy","termid":"MONDO:0000396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic diplegia","secondary_identifiers":["MEDGEN:124371","DOID:10965","ICD9:343.0","MONDO:0022698","MESH:C537945","SCTID:58193001","UMLS:C0270804","SCTID:281411007"],"synonyms":[{"name":"Little disease","type":"exact"},{"name":"Little's disease","type":"exact"},{"name":"cerebral palsy spastic diplegic","type":"related"},{"name":"cerebral spastic infantile paralysis","type":"exact"},{"name":"diplegic infantile cerebral palsy","type":"exact"},{"name":"infantile diplegic cerebral palsy","type":"exact"},{"name":"infantile spastic cerebral palsy","type":"exact"}],"termid":"MONDO:0001167","xrefs":{"Monarch":{"xref_id":"0001167"}}}


id: GO:1990910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension combined with low atmospheric pressure. Hypoxia is defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95% and hypobaric is defined as atmospheric pressure below 0.74 atm (greater than 2,500 m above sea level).","definition_xrefs":["PMID:24590457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hypoxia","termid":"GO:0001666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hypobaric hypoxia","termid":"GO:1990910"}


id: PBO:0088006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C protein phosphatase (PP2C); dephosphorylates Hog1p to limit maximal osmostress induced kinase activity; dephosphorylates Ire1p to downregulate the unfolded protein response; dephosphorylates Cdc28p; inactivates the DNA damage checkpoint; PTC2 has a paralog, PTC3, that arose from the whole genome duplication","termid":"PBO:0088006"}


id: PBO:0030706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_amitrole","termid":"PBO:0030706"}


id: GO:0061420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of biotin.","definition_xrefs":["PMID:16533810","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to biotin starvation (obsolete GO:0061420)","termid":"GO:0061420"}


id: GO:0032624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-20 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-20 production","secondary_identifiers":["GO:0042237","GO:0072618"],"synonyms":[{"name":"IL-20 production","type":"exact"},{"name":"ZCYTO10 production","type":"exact"},{"name":"interleukin-20 biosynthetic process","type":"narrow"},{"name":"interleukin-20 secretion","type":"narrow"}],"termid":"GO:0032624"}


id: PBO:0055057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2473","termid":"PBO:0055057"}


id: PR:Q9P7Z8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC26H8.13c gene.","definition_xrefs":["UniProtKB:Q9P7Z8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26H8.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.13c","synonyms":[{"name":"Spom972h-SPBC26H8.13c","type":"exact"}],"termid":"PR:Q9P7Z8"}


id: MONDO:0008788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"IRIDA (Iron-refractory iron deficiency anemia) syndrome is a rare autosomal recessive iron metabolism disorder characterized by iron deficiency anemia (hypochromic, microcytic) that is often unresponsive to oral iron intake and partially responsive to parenteral iron treatment.","definition_xrefs":["Orphanet:209981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcytic anemia","termid":"MONDO:0001245"},{"relation_name":"is_a","term_name":"hereditary anemia","termid":"MONDO:0016624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"IRIDA syndrome","secondary_identifiers":["MEDGEN:39081","SCTID:722005000","UMLS:C0085576","GARD:10957","MESH:C562385","OMIM:206200"],"synonyms":[{"name":"IRIDA","type":"related"},{"name":"IRIDA syndrome","type":"exact"},{"name":"anemia, hypochromic microcytic, with defect in iron metabolism","type":"related"},{"name":"iron-handling disorder, hereditary","type":"related"},{"name":"iron-refractory iron deficiency anaemia","type":"exact"},{"name":"iron-refractory iron deficiency anemia","type":"exact"},{"name":"pseudo-iron-deficiency Anaemia","type":"related"},{"name":"pseudo-iron-deficiency Anemia","type":"related"}],"termid":"MONDO:0008788","xrefs":{"Monarch":{"xref_id":"0008788"}}}


id: PBO:0108619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGBP1 pseudogene 1","termid":"PBO:0108619"}


id: MONDO:0003737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Leydig cell tumor characterized by a large size, cellular atypia, high mitotic activity, vascular invasion and necrotic changes. The prognosis is usually poor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant Leydig cell tumor","termid":"MONDO:0000377"},{"relation_name":"is_a","term_name":"testicular Leydig cell tumor","termid":"MONDO:0003124"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant testicular Leydig cell tumor","secondary_identifiers":["DOID:6021","MEDGEN:271769","NCIT:C39942","UMLS:C1515288"],"synonyms":[{"name":"testicular Leydig cell tumor, malignant","type":"exact"}],"termid":"MONDO:0003737","xrefs":{"Monarch":{"xref_id":"0003737"}}}


id: MONDO:0035471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder with multisystemic involvement and primary lymphedema (obsolete MONDO:0035471)","secondary_identifiers":["Orphanet:568047"],"termid":"MONDO:0035471","xrefs":{"Monarch":{"xref_id":"0035471"}}}


id: GO:0045292
data:
  {"annotated_genes":["SJAG_02279","SJAG_01629","SJAG_03890","SJAG_00859","SJAG_00363","SJAG_00809","SJAG_01557","SJAG_00888","SJAG_01301","SJAG_02843","SJAG_04214","SJAG_04949","SJAG_02295","SJAG_00414","SJAG_04783","SJAG_04863","SJAG_02862","SJAG_01015","SJAG_04163","SJAG_05235","SJAG_04318","SJAG_04222","SJAG_01870","SJAG_01452","SJAG_04694","SJAG_01504","SJAG_03937","SJAG_03954","SJAG_03460","SJAG_03995","SJAG_03245","SJAG_00094","SJAG_00539","SJAG_01214","SJAG_02317","SJAG_01634","SJAG_04911","SJAG_00911","SJAG_02688","SJAG_00818","SJAG_03369","SJAG_02686","SJAG_04914","SJAG_04405","SJAG_00225","SJAG_01433","SJAG_03498","SJAG_01040","SJAG_01144","SJAG_00083","SJAG_03430","SJAG_04497","SJAG_05211","SJAG_02396","SJAG_00577","SJAG_00058","SJAG_03469","SJAG_02455","SJAG_02083","SJAG_02304","SJAG_00998","SJAG_01852","SJAG_03070","SJAG_00322","SJAG_03993","SJAG_01308","SJAG_04025","SJAG_02078","SJAG_02879","SJAG_05009","SJAG_03966","SJAG_01810","SJAG_03238","SJAG_00639","SJAG_03547","SJAG_04433","SJAG_02558","SJAG_00504","SJAG_00571","SJAG_04589","SJAG_04230","SJAG_00249","SJAG_02185","SJAG_04529","SJAG_02227","SJAG_05212","SJAG_03112","SJAG_01008","SJAG_03711","SJAG_03214","SJAG_00498","SJAG_04071","SJAG_04117","SJAG_00446","SJAG_01511","SJAG_03210","SJAG_01327","SJAG_01547","SJAG_04079","SJAG_04898","SJAG_03849","SJAG_01819","SJAG_01440","SJAG_03279","SJAG_01408","SJAG_02905","SJAG_03983","SJAG_05240","SJAG_03410","SJAG_03427","SJAG_05224","SJAG_03601","SJAG_03301","SJAG_03894","SJAG_02844","SJAG_01654","SJAG_00076","SJAG_00989","SJAG_02469","SJAG_00597","SJAG_04293","SJAG_03687","SJAG_00531","SJAG_05349","SJAG_01152","SJAG_02018","SJAG_00643","SJAG_05208","SJAG_00147","SJAG_02772","SJAG_05025","SJAG_02687","SJAG_01200","SJAG_16453","SJAG_00313","SJAG_01064","SJAG_03291","SJAG_02722","SJAG_05926","SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59742,75231,78654,79739,87773,88118,88860,89332,91762,92140,92443,93010,93031,93233,93459,93933,95069,95673,96132,96284,96311,96545,96776,97170,97727,98001,100953,102728,102790,103020,103337,103521,104831,104993,105275,105811,107079,107954,108196,109180,110091,110822,111592,111839,112962,113475,113765,114146,114662,114668,115164,117179,117327,117521,118278,118851,119196,57093,57646,58092,59268,59331,62086,64629,64657,64664,65517,65699,66706,67564,67780,68196,70754,70778,71017,71506,71803,72153,72164,72467,72492,73183,73245,73544,73882,74376,74393,74448,74472,74671,74887,75014,75016,75417,75735,75878,75922,76069,76182,76298,76329,76473,76595,76977,77324,77721,77733,77933,78030,78107,78276,78704,79114,79712,79735,80181,80387,80484,92494,95524],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[118131],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000354"},{"annotations":[103024,110375,110951,112675,115550,95518,79907,94341,95937,91906,106199,102863,95266,113584,110937,98160],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000395"},{"annotations":[89816,118714],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905746"},{"annotations":[98892],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905744"}]},"cv_name":"biological_process","definition":"The joining together, after removal of an intervening sequence composed of one or more introns, of two segments of the same RNA molecule via spliceosomal catalysis to produce an mRNA composed only of exon sequences that all came from the same primary transcript.","definition_xrefs":["GOC:krc","ISBN:0879695897","PMID:18458335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splicing, via 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cis splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear mRNA cis splicing, via U2-type spliceosome","type":"narrow"},{"name":"nuclear mRNA cis splicing, via spliceosome","type":"exact"},{"name":"splicing","type":"broad"}],"termid":"GO:0045292","terms_by_termid":{"GO:0000354":null,"GO:0000395":null,"GO:0045292":null,"GO:1905744":null,"GO:1905746":null}}


id: PBO:0031033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peroxisome_organization","termid":"PBO:0031033"}


id: PBO:0065552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 4 pseudogene 2","termid":"PBO:0065552"}


id: PBO:0075245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 15","termid":"PBO:0075245"}


id: GO:0061153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a trachea gland over time, from its formation to the mature structure. Trachea glands are found under the mucus of the trachea and secrete mucus, and agents that help protect the lung from injury and infection.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"trachea submucosa development","termid":"GO:0061152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea gland development","termid":"GO:0061153"}


id: PBO:0065338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteinase 3","termid":"PBO:0065338"}


id: PBO:0004289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Yml6 (predicted)","termid":"PBO:0004289"}


id: MONDO:0002787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A craniopharyngioma consisting of broad strands, cords and bridges of a multistratified squamous epithelium with peripheral palisading of nuclei. Diagnostic features include nodules of compact 'wet' keratin and dystrophic calcification. (Adapted from WHO)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniopharyngioma","termid":"MONDO:0018907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adamantinous craniopharyngioma","secondary_identifiers":["DOID:3846","ICDO:9351/1","MEDGEN:98126","NCIT:C4726","UMLS:C0431129"],"synonyms":[{"name":"adamantinomatous craniopharyngioma","type":"exact"},{"name":"adamantinous Rathke's pouch neoplasm","type":"exact"},{"name":"adamantinous Rathke's pouch tumor","type":"exact"},{"name":"adamantinous Rathke's pouch tumour","type":"exact"},{"name":"adamantinous craniopharyngioma (morphologic abnormality)","type":"exact"},{"name":"adamantinous neoplasm of Rathke's pouch","type":"exact"},{"name":"adamantinous tumor of Rathke's pouch","type":"exact"},{"name":"adamantinous tumour of Rathke's pouch","type":"exact"},{"name":"craniopharyngioma, adamantinomatous","type":"exact"}],"termid":"MONDO:0002787","xrefs":{"Monarch":{"xref_id":"0002787"}}}


id: PR:O43009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug110 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 110 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.10c","synonyms":[{"name":"Spom972h-mug110","type":"exact"}],"termid":"PR:O43009"}


id: GO:0019144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-sugar + H2O = AMP + sugar 1-phosphate.","definition_xrefs":["EC:3.6.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"ADP-sugar diphosphatase activity","secondary_identifiers":["MetaCyc:ADPSUGPPHOSPHAT-RXN"],"synonyms":[{"name":"ADP-sugar pyrophosphatase activity","type":"related"},{"name":"ADP-sugar sugarphosphohydrolase activity","type":"related"},{"name":"ADPsugar pyrophosphatase activity","type":"related"},{"name":"adenosine diphosphosugar pyrophosphatase activity","type":"related"},{"name":"nucleoside diphosphate-sugar hydrolase activity","type":"broad"}],"termid":"GO:0019144"}


id: PBO:0043833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation specific factor 4 like","termid":"PBO:0043833"}


id: GO:2000815
data:
  {"annotated_genes":["SJAG_02573","SJAG_05014","SJAG_03886"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90142,90535,91865],"is_not":false,"summary":null,"term":"GO:2000815"}]},"cv_name":"biological_process","definition":"A process of regulation of mRNA stability that is involved in a response to oxidative stress.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability involved in response to stress","termid":"GO:0010610"},{"relation_name":"part_of","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02573":null,"SJAG_03886":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA stability involved in response to oxidative stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000815","terms_by_termid":{"GO:2000815":null}}


id: MONDO:0800319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration","termid":"MONDO:0004580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone dystrophy 5, X-linked","secondary_identifiers":["UMLS:C3887937","MEDGEN:854645"],"synonyms":[{"name":"COD5","type":"exact"}],"termid":"MONDO:0800319","xrefs":{"Monarch":{"xref_id":"0800319"}}}


id: GO:0046062
data:
  {"annotated_genes":["SJAG_00885","SJAG_04665","SJAG_02874"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95822,92779,107570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dCDP, deoxycytidine 5'-diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009196"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dCDP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dCDP metabolism","type":"exact"}],"termid":"GO:0046062","terms_by_termid":{"GO:0006240":null}}


id: GO:1902274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of (R)-carnitine transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:23755272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of (R)-carnitine transmembrane transport","termid":"GO:1902272"},{"relation_name":"positively_regulates","term_name":"(R)-carnitine transmembrane transport","termid":"GO:1902270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of (R)-carnitine transmembrane transport","synonyms":[{"name":"activation of (R)-carnitine transmembrane transport","type":"narrow"},{"name":"up regulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"up-regulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"upregulation of (R)-carnitine transmembrane transport","type":"exact"}],"termid":"GO:1902274"}


id: GO:0102679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (5alpha)-campestan-3-one + O2 + NADPH = (5alpha,22S,24R)-22-hydroxyergostan-3-one + H2O + NADP.","definition_xrefs":["PMID:10377996","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(5alpha)-campestan-3-one hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-4230"],"termid":"GO:0102679"}


id: GO:0046952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone. Ketone bodies can be used as an energy source as an alternative to glucose. Utilization of ketone bodies in peripheral tissues involves conversion of acetoacetate to acetoacetyl-CoA, which is then converted to two molecules of acetyl-CoA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"},{"relation_name":"is_a","term_name":"ketone body metabolic process","termid":"GO:1902224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"ketone body catabolic process","secondary_identifiers":["MetaCyc:PWY66-368","Reactome:R-HSA-77108"],"synonyms":[{"name":"ketolysis","type":"exact"},{"name":"ketone body breakdown","type":"exact"},{"name":"ketone body catabolism","type":"exact"},{"name":"ketone body degradation","type":"exact"},{"name":"utilization of ketone bodies","type":"exact"}],"termid":"GO:0046952"}


id: FYPO:0007167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is normal (i.e. indistinguishable from wild type) during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to cell cortex during meiotic prophase I","synonyms":[{"name":"normal protein localisation to cell cortex during meiotic prophase I","type":"exact"},{"name":"normal protein localisation to cell cortex during prophase I","type":"exact"}],"termid":"FYPO:0007167"}


id: PBO:0083350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene HED1/YDR014W-A","termid":"PBO:0083350"}


id: MONDO:1010548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diprosopus that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diprosopus, non-human animal","termid":"MONDO:1010045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diprosopus, cattle","secondary_identifiers":["OMIA:000290-9913"],"termid":"MONDO:1010548","xrefs":{"Monarch":{"xref_id":"1010548"}}}


id: MONDO:0800138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disease caused by a loss-of-function variation in the IKZF1/IKAROSgene. Leukocytes of patients exhibited specific defects including impaired IL-2 production by T cells, T helper (TH) skewing toward TH2, low numbers of regulatory T cells (Treg), eosinophilia, and abnormal PC proliferation.","definition_xrefs":["PMID:35333544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"multisystem autoimmune disease due to IKAROS gain of function","termid":"MONDO:0800138","xrefs":{"Monarch":{"xref_id":"0800138"}}}


id: PBO:0057754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1913","termid":"PBO:0057754"}


id: PBO:0035955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_Zeocin","termid":"PBO:0035955"}


id: PBO:0082771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the spindle checkpoint; involved in sensing lack of tension on mitotic chromosomes; protects centromeric Rec8p at meiosis I; required for accurate chromosomal segregation at meiosis II and for mitotic chromosome stability; recruits condensin to the pericentric region of chromosomes during meiosis; dissociates from pericentromeres when sister kinetochores are under tension","termid":"PBO:0082771"}


id: PBO:0075998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP4 metalloreductase","termid":"PBO:0075998"}


id: PBO:0046212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 5","termid":"PBO:0046212"}


id: PBO:0071085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 87","termid":"PBO:0071085"}


id: PBO:0016905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyogamy protein Tht2","termid":"PBO:0016905"}


id: GO:0018792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: bis(4-chlorophenyl)acetate + H+ = CO2 + bis(4-chlorophenyl)methane. Bis(4-chlorophenyl)acetate is also known as DDA; bis(4-chlorophenyl)methane is also known as DDM.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete bis(4-chlorophenyl)acetate decarboxylase activity (obsolete GO:0018792)","synonyms":[{"name":"DDA decarboxylase activity","type":"exact"}],"termid":"GO:0018792"}


id: GO:0046578
data:
  {"annotated_genes":["SJAG_02379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Ras protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Ras protein signal transduction","termid":"GO:0007265"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Ras protein signal transduction","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0046578","terms_by_termid":{"GO:0046580":null}}


id: PBO:0060392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 1 pseudogene 2","termid":"PBO:0060392"}


id: MONDO:0003871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metanephric adenoma (obsolete MONDO:0003871)","termid":"MONDO:0003871","xrefs":{"Monarch":{"xref_id":"0003871"}}}


id: GO:1902518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclophosphamide stimulus.","definition_xrefs":["GOC:dw","GOC:TermGenie","PMID:23648065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclophosphamide","termid":"GO:1902518"}


id: PBO:0074631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 25B","termid":"PBO:0074631"}


id: GO:1905479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of glutamate-ammonia ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:10377385"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of glutamate-ammonia ligase activity (obsolete GO:1905479)","synonyms":[{"name":"down regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"down regulation of L-glutamine synthetase activity","type":"exact"},{"name":"down regulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"down regulation of glutamine synthetase activity","type":"exact"},{"name":"down regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"down-regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"down-regulation of L-glutamine synthetase activity","type":"exact"},{"name":"down-regulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"down-regulation of glutamine synthetase activity","type":"exact"},{"name":"down-regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"downregulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"downregulation of L-glutamine synthetase activity","type":"exact"},{"name":"downregulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"downregulation of glutamine synthetase activity","type":"exact"},{"name":"downregulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"inhibition of L-glutamate:ammonia ligase (ADP-forming)","type":"narrow"},{"name":"inhibition of L-glutamine synthetase activity","type":"narrow"},{"name":"inhibition of glutamate-ammonia ligase activity","type":"narrow"},{"name":"inhibition of glutamine synthetase activity","type":"narrow"},{"name":"inhibition of glutamylhydroxamic synthetase activity","type":"narrow"},{"name":"negative regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"negative regulation of L-glutamine synthetase activity","type":"exact"},{"name":"negative regulation of glutamine synthetase activity","type":"exact"},{"name":"negative regulation of glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"GO:1905479"}


id: PBO:0083233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion enhances replication of Brome mosaic virus in S. cerevisiae, but likely due to effects on the overlapping gene","termid":"PBO:0083233"}


id: PBO:0043287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 5A","termid":"PBO:0043287"}


id: GO:0033555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a multicellular organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal response to stress","termid":"GO:0033555"}


id: GO:0043487
data:
  {"annotated_genes":["SJAG_16457","SJAG_02239","SJAG_03179","SJAG_00285","SJAG_00343","SJAG_00759","SJAG_01521","SJAG_04880","SJAG_03876","SJAG_05010","SJAG_04824","SJAG_03886","SJAG_00797","SJAG_02036","SJAG_03157","SJAG_03745","SJAG_02622","SJAG_01053","SJAG_01910","SJAG_04118","SJAG_00391","SJAG_05014","SJAG_00854","SJAG_04153","SJAG_03597","SJAG_01191","SJAG_01625","SJAG_02540","SJAG_02573","SJAG_02383","SJAG_04407","SJAG_00966","SJAG_03283","SJAG_01696","SJAG_04586","SJAG_04946","SJAG_03696","SJAG_04006","SJAG_01818","SJAG_00670","SJAG_00686","SJAG_02370","SJAG_02213","SJAG_05322","SJAG_05694","SJAG_04825","SJAG_04818","SJAG_04321","SJAG_04084","SJAG_04350","SJAG_02808","SJAG_03113","SJAG_03883","SJAG_01944"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[79085,79148,90532,100415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[74679,58572,76141,77928,80024,112311],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[118413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[71033,89827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[92010],"is_not":false,"rel_names":["is_a","regulates","negatively_regulates"],"summary":null,"term":"GO:0060212"},{"annotations":[97572,104717,116187,93420,96248,102399,92588,107768,115748,118603,105582,106783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[98378,115449,98464,60178,70881,100252,76959,79879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[74125,116904,95842,75881,70707,77939,92941,80062,94673,90128,91123,115961,79301,92843],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[92011],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[66774,91124,117530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[88748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043488"},{"annotations":[90535,90142,91865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000815"},{"annotations":[90978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Any process that modulates the propensity of RNA molecules to degradation. Includes processes that both stabilize and destabilize RNAs.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"post-transcriptional regulation of gene expression","termid":"GO:0010608"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"regulates","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":54,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00670":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00797":null,"SJAG_00854":null,"SJAG_00966":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01696":null,"SJAG_01818":null,"SJAG_01910":null,"SJAG_01944":null,"SJAG_02036":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02622":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03283":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04586":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_04946":null,"SJAG_05010":null,"SJAG_05014":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of RNA stability","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0043487","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0036450":null,"GO:0043488":null,"GO:0048255":null,"GO:0060212":null,"GO:0061157":null,"GO:0061158":null,"GO:0070935":null,"GO:0071042":null,"GO:0090669":null,"GO:1990074":null,"GO:2000815":null}}


id: PBO:0068591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 42, pseudogene","termid":"PBO:0068591"}


id: PBO:0028644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dehydrodolichyl_diphosphate_synthase_activity","termid":"PBO:0028644"}


id: GO:0045944
data:
  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id: GO:0070118
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id: MONDO:1012620
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