# terms

id: GO:0003409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of the optic cup. This process pertains to the physical shaping of the rudimentary structure.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"optic cup morphogenesis involved in camera-type eye development","termid":"GO:0002072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic cup structural organization","synonyms":[{"name":"optic cup structural organisation","type":"exact"}],"termid":"GO:0003409"}


id: MONDO:0011215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteocraniostenosis is a lethal skeletal dysplasia characterized by a cloverleaf skull anomaly, facial dysmorphism, limb shortness, splenic hypo/aplasia and radiological anomalies including thin tubular bones with flared metaphyses and deficient calvarial mineralization.","definition_xrefs":["Orphanet:2763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteocraniostenosis","secondary_identifiers":["ICD10CM:Q78.0","SCTID:722109008","GARD:3396","MEDGEN:356331","UMLS:C1865639","icd11.foundation:539409723","MESH:C537291","OMIM:602361"],"synonyms":[{"name":"GCLEB","type":"related"},{"name":"Habrodysplasia","type":"related"},{"name":"Osteocraniosplenic syndrome","type":"exact"},{"name":"gracile bone dysplasia","type":"exact"},{"name":"osteocraniostenosis","type":"exact"},{"name":"skeletal dysplasia lethal with gracile bones","type":"related"},{"name":"skeletal dysplasia, lethal, with gracile bones","type":"related"}],"termid":"MONDO:0011215","xrefs":{"Monarch":{"xref_id":"0011215"}}}


id: MONDO:0008129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ophthalmoplegia, familial total, with iris transillumination","secondary_identifiers":["MESH:C563499","OMIM:165098","UMLS:C1833836","MEDGEN:371665"],"synonyms":[{"name":"ophthalmoplegia, familial total, with iris transillumination","type":"exact"}],"termid":"MONDO:0008129","xrefs":{"Monarch":{"xref_id":"0008129"}}}


id: GO:0045912
data:
  {"annotated_genes":["SJAG_01376","SJAG_00685","SJAG_00963","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79207,77530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[73408,76377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving carbohydrate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"negatively_regulates","term_name":"carbohydrate metabolic process","termid":"GO:0005975"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_00963":null,"SJAG_01376":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of carbohydrate metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of carbohydrate metabolic process","type":"exact"},{"name":"down-regulation of carbohydrate metabolic process","type":"exact"},{"name":"downregulation of carbohydrate metabolic process","type":"exact"},{"name":"inhibition of carbohydrate metabolic process","type":"narrow"},{"name":"negative regulation of carbohydrate metabolism","type":"exact"}],"termid":"GO:0045912","terms_by_termid":{"GO:0045719":null,"GO:0045820":null}}


id: PBO:0047370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 2","termid":"PBO:0047370"}


id: PBO:0050959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 2","termid":"PBO:0050959"}


id: GO:0140536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A transcription corepressor activity that represses or decreases the transcription of specific gene sets via binding to a DNA-bound nuclear receptor, either on its own or as part of a complex. Nuclear receptor corepressors often act by altering chromatin structure and modifications. For example, one class of transcription nuclear receptor corepressors modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators.","definition_xrefs":["PMID:7566114","PMID:9238851","PMID:7566126"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear receptor corepressor activity (obsolete GO:0140536)","synonyms":[{"name":"nuclear corepressor activity","type":"broad"}],"termid":"GO:0140536"}


id: GO:1904093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of autophagic cell death.","definition_xrefs":["PMID:25736836","GOC:bhm","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of autophagic cell death","termid":"GO:1904092"},{"relation_name":"negatively_regulates","term_name":"autophagic cell death","termid":"GO:0048102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of autophagic cell death","synonyms":[{"name":"down regulation of autophagic cell death","type":"exact"},{"name":"down regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"down regulation of type II programmed cell death","type":"related"},{"name":"down-regulation of autophagic cell death","type":"exact"},{"name":"down-regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"down-regulation of type II programmed cell death","type":"related"},{"name":"downregulation of autophagic cell death","type":"exact"},{"name":"downregulation of programmed cell death by macroautophagy","type":"exact"},{"name":"downregulation of type II programmed cell death","type":"related"},{"name":"inhibition of autophagic cell death","type":"narrow"},{"name":"inhibition of programmed cell death by macroautophagy","type":"narrow"},{"name":"inhibition of type II programmed cell death","type":"related"},{"name":"negative regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"negative regulation of type II programmed cell death","type":"related"}],"termid":"GO:1904093"}


id: GO:0033514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA, via the intermediate L-pipecolate.","definition_xrefs":["MetaCyc:PWY-5283","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process to acetyl-CoA","termid":"GO:0019474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0006520","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"L-lysine catabolic process to acetyl-CoA via L-pipecolate","synonyms":[{"name":"L-lysine breakdown to acetyl-CoA via L-pipecolate","type":"exact"},{"name":"L-lysine degradation to acetyl-CoA via L-pipecolate","type":"exact"}],"termid":"GO:0033514"}


id: PBO:0110387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL antisense RNA 1","termid":"PBO:0110387"}


id: PBO:0041103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSG antisense RNA 1","termid":"PBO:0041103"}


id: GO:0002567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the generation of sequence diversity of the FREP-based immune receptors of snails.","definition_xrefs":["GOC:add","PMID:16102575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of FREP-based immune receptors","termid":"GO:0002567"}


id: GO:0033997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(2->1)-beta-D-fructosyl](n) = [(2->1)-beta-D-fructosyl](n-1) + alpha-D-fructofuranose-beta-D-fructofuranose 1,2':1,2'-dianhydride. This reaction is the production of alpha-D-fructofuranose beta-D-fructofuranose 1,2':2,1'-dianhydride (DFA I) by successively eliminating the diminishing (2->1)-beta-D-fructan (inulin) chain from the terminal D-fructosyl-D-fructosyl disaccharide.","definition_xrefs":["EC:4.2.2.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"inulin fructotransferase (DFA-I-forming) activity","secondary_identifiers":["MetaCyc:4.2.2.17-RXN"],"synonyms":[{"name":"2,1-beta-D-fructan lyase (alpha-D-fructofuranose-beta-D-fructofuranose-1,2':2,1'-dianhydride-forming) activity","type":"related"},{"name":"inulin D-fructosyl-D-fructosyltransferase (1,2':1',2-dianhydride-forming) activity","type":"related"},{"name":"inulin D-fructosyl-D-fructosyltransferase (forming alpha-D-fructofuranose beta-D-fructofuranose 1,2':1',2-dianhydride) activity","type":"related"},{"name":"inulin fructotransferase (DFA-I-producing) activity","type":"related"},{"name":"inulin fructotransferase (depolymerizing, difructofuranose-1,2':2',1-dianhydride-forming) activity","type":"related"}],"termid":"GO:0033997"}


id: PBO:0058797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7703","termid":"PBO:0058797"}


id: MONDO:0015687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic leukemia","termid":"MONDO:0001014"},{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"chronic eosinophilic leukemia","secondary_identifiers":["DOID:0080367","ICDO:9964/3","UMLS:C0346421","NCIT:C4563","GARD:20104","MedDRA:10065854","Orphanet:168940","MEDGEN:91106","ONCOTREE:CELNOS","SCTID:188733003","MESH:C580364"],"synonyms":[{"name":"CEL","type":"exact"},{"name":"CEL/hypereosinophilic syndrome","type":"exact"},{"name":"CELNOS","type":"related"},{"name":"chronic eosinophilic leukemia","type":"exact"},{"name":"chronic eosinophilic leukemia/hypereosinophilic syndrome","type":"exact"},{"name":"eosinophilic leukaemia","type":"exact"},{"name":"eosinophilic leukemia","type":"exact"}],"termid":"MONDO:0015687","xrefs":{"Monarch":{"xref_id":"0015687"}}}


id: FYPO:0001503
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is lower than normal during sporulation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal alpha,alpha-trehalase activity","termid":"FYPO:0001479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased alpha,alpha-trehalase activity during sporulation","synonyms":[{"name":"decreased neutral trehalase activity during sporulation","type":"exact"},{"name":"decreased trehalase activity during sporulation","type":"broad"},{"name":"reduced alpha,alpha-trehalase activity during sporulation","type":"exact"}],"termid":"FYPO:0001503"}


id: FYPO:0003644
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is too low to detect during a cellular response to thiamine starvation. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to thiamine starvation","termid":"FYPO:0001244"},{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to thiamine starvation","synonyms":[{"name":"RNA absent from cell during cellular response to thiamine starvation during mitotic cell cycle","type":"related"},{"name":"RNA absent from cell during cellular response to thiamine starvation during vegetative growth","type":"exact"},{"name":"RNA absent from cell during cellular response to vitamin B1 starvation","type":"exact"},{"name":"transcripts absent from cell during cellular response to thiamine starvation","type":"exact"},{"name":"undetectable RNA level during cellular response to thiamine starvation","type":"exact"}],"termid":"FYPO:0003644"}


id: PBO:0042063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 126","termid":"PBO:0042063"}


id: MONDO:0020333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aggressive systemic mastocytosis (ASM) is a severe and rare form of systemic mastocytosis (SM) characterized by considerable infiltration of mast cells in different tissues.","definition_xrefs":["Orphanet:98850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic mastocytosis","termid":"MONDO:0016586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"aggressive systemic mastocytosis","secondary_identifiers":["MedDRA:10056453","icd11.foundation:870477963","SCTID:716655008","UMLS:C1112486","DOID:4798","ICDO:9741/3","GARD:19597","NCIT:C9285","ONCOTREE:ASM","MEDGEN:206813"],"synonyms":[{"name":"ASM","type":"exact"},{"name":"aggressive systemic mastocytosis (morphologic abnormality)","type":"exact"},{"name":"lymphadenopathic mastocytosis with eosinophilia","type":"exact"}],"termid":"MONDO:0020333","xrefs":{"Monarch":{"xref_id":"0020333"}}}


id: GO:0015256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete monocarboxylate channel activity (obsolete GO:0015256)","synonyms":[{"name":"monocarboxylate channel activity","type":"exact"}],"termid":"GO:0015256"}


id: PBO:0058874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9986","termid":"PBO:0058874"}


id: MONDO:0015405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by vascular malformations that encompasses a spectrum of phenotypic expression involving arteriovenous malformations (AVMs) of the cerebral, orbital, and facial region.","definition_xrefs":["PMID:27787648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteriovenous hemangioma/malformation","termid":"MONDO:0001256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrofacial arteriovenous metameric syndrome","secondary_identifiers":["icd11.foundation:1402414905","SCTID:703266007","MEDGEN:825110","UMLS:C3839265","GARD:12662","Orphanet:141189"],"synonyms":[{"name":"CAMS","type":"exact"}],"termid":"MONDO:0015405","xrefs":{"Monarch":{"xref_id":"0015405"}}}


id: GO:0052889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of reactions in which 9,9'-di-cis-zeta-carotene is desaturated to 7,9,9'-tri-cis-neurosporene, and then 7,9,7',9'-tetra-cis-lycopene. The overall reaction for this process is: 9,9'-di-cis-zeta-carotene + 2 quinone = 2 quinol + 7,9,7',9'-tetra-cis-lycopene.","definition_xrefs":["MetaCyc:PWY-6475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene","synonyms":[{"name":"7,9,7',9'-tetra-cis-lycopene biosynthesis from 9,9'-di-cis-zeta-carotene","type":"exact"},{"name":"9,9'-di-cis-zeta-carotene catabolism to 7,9,7',9'-tetra-cis-lycopene","type":"exact"}],"termid":"GO:0052889"}


id: PBO:0027598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cell_division_site","termid":"PBO:0027598"}


id: MONDO:0009886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleoconial myopathy with salt craving","secondary_identifiers":["MEDGEN:337911","MESH:C564883","OMIM:262900","UMLS:C1849773"],"synonyms":[{"name":"pleoconial myopathy with salt craving","type":"exact"}],"termid":"MONDO:0009886","xrefs":{"Monarch":{"xref_id":"0009886"}}}


id: PBO:0004239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex subunit, predicted histone demethylase Lid2","termid":"PBO:0004239"}


id: GO:0044327
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Distal part of the dendritic spine, that carries the post-synaptic density.","definition_xrefs":["GOC:nln","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic spine head","secondary_identifiers":["NIF_Subcellular:sao952643730"],"synonyms":[{"name":"spine head","type":"broad"}],"termid":"GO:0044327"}


id: GO:0072731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a papulacandin B stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to papulacandin B","termid":"GO:0072730"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to papulacandin B","termid":"GO:0072731"}


id: PBO:0003933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidised protein hydrolase (predicted)","termid":"PBO:0003933"}


id: PBO:0065449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 6","termid":"PBO:0065449"}


id: GO:0098689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virus switches on its replication cycle in an infected cell. The process is typically controlled by a genetic switch controlled by environmental factors such as cell type, cell shape, the availability of nutrients, superinfection or exposure of infected cells to UV or various chemical stimuli.","definition_xrefs":["PMID:19416825","PMID:24339346","VZ:3964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"regulates","term_name":"release from viral latency","termid":"GO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"latency-replication decision","synonyms":[{"name":"Latency-replication switch","type":"exact"},{"name":"lytic switch","type":"exact"},{"name":"prophage induction","type":"narrow"},{"name":"proviral induction","type":"exact"},{"name":"proviral switch","type":"exact"},{"name":"reactivation of latent virus","type":"exact"}],"termid":"GO:0098689"}


id: MONDO:1012456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple autoimmune diseases syndrome, non-human animal","termid":"MONDO:1011731"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple autoimmune diseases syndrome, dog","secondary_identifiers":["OMIA:001808-9615"],"termid":"MONDO:1012456","xrefs":{"Monarch":{"xref_id":"1012456"}}}


id: MONDO:0004233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare aggressive rhabdomyosarcoma occurring in children. The neoplasm is characterized by the presence of bizarre round, spindle, and polygonal cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"pleomorphic rhabdomyosarcoma","termid":"MONDO:0017386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood pleomorphic rhabdomyosarcoma","secondary_identifiers":["NCIT:C7959","DOID:7463","UMLS:C0279614","MEDGEN:76002"],"synonyms":[{"name":"Pleomorphic rhabdomyosarcoma","type":"exact"},{"name":"childhood anaplastic rhabdomyosarcoma","type":"exact"},{"name":"paediatric pleomorphic rhabdomyosarcoma","type":"exact"},{"name":"pediatric pleomorphic rhabdomyosarcoma","type":"exact"},{"name":"pleomorphic childhood rhabdomyosarcoma","type":"exact"},{"name":"pleomorphic rhabdomyosarcoma of childhood","type":"exact"}],"termid":"MONDO:0004233","xrefs":{"Monarch":{"xref_id":"0004233"}}}


id: SO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet consisting of two H-bonds in which: the main-chain NH of residue(i) is H-bonded to the main-chain CO of residue(i+4), the main-chain CO of residue i is H-bonded to the main-chain NH of residue(i+3), these loops have an RL nest at residues i+2 and i+3.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_bulge_loop","termid":"SO:0001108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge_loop_five","secondary_identifiers":["BS:00210"],"synonyms":[{"name":"beta bulge loop five","type":"exact"}],"termid":"SO:0001109"}


id: GO:0044162
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell cytoplasmic vesicle.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host cell cytoplasmic vesicle","termid":"GO:0044161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"}


id: GO:0030716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an oocyte cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte fate determination","synonyms":[{"name":"oocyte cell fate determination","type":"exact"}],"termid":"GO:0030716"}


id: MONDO:0020777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation with defective fucosylation","termid":"MONDO:0060720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of glycosylation with defective fucosylation 2","secondary_identifiers":["MEDGEN:1676187","OMIM:618324","UMLS:C5193028"],"synonyms":[{"name":"CDGF2","type":"related"},{"name":"CONGENITAL DISORDER OF GLYCOSYLATION WITH DEFECTIVE FUCOSYLATION 2","type":"related"}],"termid":"MONDO:0020777","xrefs":{"Monarch":{"xref_id":"0020777"}}}


id: FYPO:0006621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which deacetylation of lysine at position 4 of histone H3 is normal (i.e. indistinguishable from wild type) when the cell is returned to glucose-rich medium following glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification","termid":"FYPO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal H3-K4 deacetylation during recovery from glucose starvation","synonyms":[{"name":"normal H3-K4 deacetylation during recovery from glucose depletion","type":"exact"},{"name":"normal H3-K4 deacetylation during recovery from glucose deprivation","type":"exact"},{"name":"normal H3-K4 deacetylation during recovery from glucose limitation","type":"related"},{"name":"normal H3-K4 deacetylation following glucose starvation","type":"exact"},{"name":"normal H3K4 deacetylation during recovery from glucose starvation","type":"exact"}],"termid":"FYPO:0006621"}


id: FYPO:0004259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic G2 DNA damage checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. Normally, the mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the cell cycle in response to DNA damage.","definition_xrefs":["PMID:21098122","PomBase:mah","GO:0007095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000298","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished mitotic G2 DNA damage checkpoint","synonyms":[{"name":"abolished G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abolished mitotic G2 DNA damage checkpoint activation","type":"related"},{"name":"abolished mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"abolished mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"},{"name":"mitotic G2 DNA damage checkpoint abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0004259"}


id: MONDO:0000760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrofacial dysostosis (obsolete MONDO:0000760)","termid":"MONDO:0000760","xrefs":{"Monarch":{"xref_id":"0000760"}}}


id: MONDO:0000735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oculodentodigital dysplasia (obsolete MONDO:0000735)","termid":"MONDO:0000735","xrefs":{"Monarch":{"xref_id":"0000735"}}}


id: MONDO:0850197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma that is characterized as a molecular subtype by activation of the sonic hedgehog (SHH) pathway and TP53 mutations that may be present or absent.","definition_xrefs":["DOID:0080703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma SHH activated","secondary_identifiers":["UMLS:C4330671","NCIT:C129441","MEDGEN:1375478"],"termid":"MONDO:0850197","xrefs":{"Monarch":{"xref_id":"0850197"}}}


id: PBO:0030003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-P-bodies_present_in_increased_numbers","termid":"PBO:0030003"}


id: PBO:0056739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl aminopeptidase 2","termid":"PBO:0056739"}


id: GO:0071505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mycophenolic acid stimulus.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mycophenolic acid","synonyms":[{"name":"response to mycophenolate","type":"exact"}],"termid":"GO:0071505"}


id: PBO:0108899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 12","termid":"PBO:0108899"}


id: PBO:0034595
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_frequency_of_meiotic_crossover_associated_with_gene_conversion","termid":"PBO:0034595"}


id: MOD:01834
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 5x(13)C-labeled L-methionine sulfoxide.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfoxide","termid":"MOD:00719"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C-labeled L-methionine sulfoxide","termid":"MOD:01834"}


id: PBO:0049511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 18","termid":"PBO:0049511"}


id: MOD:00280
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to N-pyruvic acid 2-iminyl-L-valine.","definition_xrefs":["PubMed:2071591","RESID:AA0275","Unimod:422#V"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"},{"relation_name":"is_a","term_name":"pyruvic acid iminylated residue","termid":"MOD:01170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-pyruvic acid 2-iminyl-L-valine","synonyms":[{"name":"(S)-2-(1-carboxy-2-methylpropanimino)propanoic acid","type":"exact"},{"name":"MOD_RES N-pyruvate 2-iminyl-valine","type":"exact"},{"name":"N-pyruvic acid 2-iminyl","type":"related"},{"name":"N-pyruvic acid 2-iminyl-L-valine","type":"exact"},{"name":"PyruvicAcidIminyl","type":"related"}],"termid":"MOD:00280"}


id: GO:0071694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location within the extracellular region and is prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location","termid":"GO:0045185"},{"relation_name":"part_of","term_name":"protein localization to extracellular region","termid":"GO:0071692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein location in extracellular region","termid":"GO:0071694"}


id: MONDO:0035249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare coronary artery congenital malformation characterized by an anomalous origin and course of the left coronary artery, which originates from the right aortic sinus of Valsalva and has an abnormal proximal course, which may be intramural, prepulmonic, subpulmonic, retroaortic, retrocardiac or wrapped around the apex. Patients are frequently asymptomatic, although chest pain, dyspnea, palpitations, dizziness, syncope, and sudden cardiac arrest/death (typically following intense physical exertion) may be observed. This malformation is associated with a high risk of sudden cardiac death so surgical revascularization is recommended even in cases with no associated evidence of myocardial ischemia. [Orphanet:541443]","definition_xrefs":["Orphanet:541443"],"gene_count":0,"genotype_count":0,"name":"obsolete anomalous aortic origin of the left coronary artery (obsolete MONDO:0035249)","secondary_identifiers":["ICD10CM:Q24.5"],"termid":"MONDO:0035249","xrefs":{"Monarch":{"xref_id":"0035249"}}}


id: GO:0097028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a dendritic cell. A dendritic cell is a leukocyte of dendritic lineage specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.","definition_xrefs":["GOC:pr","CL:0000451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell differentiation","termid":"GO:1903131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell differentiation","termid":"GO:0097028"}


id: MONDO:0010040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxia, spastic, childhood-onset, autosomal recessive, with optic atrophy and intellectual disability","secondary_identifiers":["OMIM:270500","UMLS:C3151619","MEDGEN:462969"],"synonyms":[{"name":"ataxia, spastic, childhood-onset, autosomal recessive, with optic atrophy and intellectual disability","type":"exact"},{"name":"ataxia, spastic, childhood-onset, autosomal recessive, with optic atrophy and mental retardation","type":"exact"}],"termid":"MONDO:0010040","xrefs":{"Monarch":{"xref_id":"0010040"}}}


id: MONDO:0024262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal aspiration syndrome","termid":"MONDO:0024263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"massive neonatal aspiration syndrome","secondary_identifiers":["SCTID:10269001","MEDGEN:542567","UMLS:C0270152"],"termid":"MONDO:0024262","xrefs":{"Monarch":{"xref_id":"0024262"}}}


id: GO:0043989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the addition of an phosphate group to a serine residue at position 1 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-S1 phosphorylation (obsolete GO:0043989)","synonyms":[{"name":"histone H4 phosphorylation at S1","type":"exact"},{"name":"histone H4S1 phosphorylation","type":"exact"}],"termid":"GO:0043989"}


id: GO:1990356
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex consisting of a SUMO (small ubiquitin-related modifier) protein bound to a SUMO-conjugating E2 ligase. Sumoylation of the E2 ligase is an intermediate step required for the formation of covalent bonds between a SUMO protein and its ultimate protein target. SUMO is transferred to the E2 ligase by a SUMO-activating E1 enzyme. Sumoylation of the target protein is either facilitated directly by the sumoylated E2 ligase or aided by an optional E3 ligase.","definition_xrefs":["PMID:18691969","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete sumoylated E2 ligase complex (obsolete GO:1990356)","termid":"GO:1990356"}


id: PBO:0031256
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ascospore_wall_assembly","termid":"PBO:0031256"}


id: GO:0009875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interaction between a pollen grain and pistil.","definition_xrefs":["PMID:27899537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"part_of","term_name":"pollination","termid":"GO:0009856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen-pistil interaction","synonyms":[{"name":"pollen-gynoecium interaction","type":"exact"}],"termid":"GO:0009875"}


id: GO:0051254
data:
  {"annotated_genes":["SJAG_03538","SJAG_00156","SJAG_05694","SJAG_02723","SJAG_01441","SJAG_02406","SJAG_02255","SJAG_02474","SJAG_02622","SJAG_00904","SJAG_00391","SJAG_02254","SJAG_04551","SJAG_01151","SJAG_02956","SJAG_03622","SJAG_04839","SJAG_04682","SJAG_01213","SJAG_01938","SJAG_03484","SJAG_02196","SJAG_01149","SJAG_03735","SJAG_03289","SJAG_02938","SJAG_00698","SJAG_02808","SJAG_00163","SJAG_01778","SJAG_01191","SJAG_05187","SJAG_02810","SJAG_04818","SJAG_00909","SJAG_04153","SJAG_01818","SJAG_04824","SJAG_01053","SJAG_00285","SJAG_03279","SJAG_04855","SJAG_01583","SJAG_03879","SJAG_00613","SJAG_02592","SJAG_03883","SJAG_02494","SJAG_04755","SJAG_02018","SJAG_02709","SJAG_03876","SJAG_04118","SJAG_02608","SJAG_04206","SJAG_01910","SJAG_02048","SJAG_00802","SJAG_01403","SJAG_02391","SJAG_04880","SJAG_02036","SJAG_02326","SJAG_03067","SJAG_03897","SJAG_02551","SJAG_00766","SJAG_04825","SJAG_02138","SJAG_01696","SJAG_01307","SJAG_00266","SJAG_05341","SJAG_01944","SJAG_03113","SJAG_01199","SJAG_03118","SJAG_02472","SJAG_00693","SJAG_05153","SJAG_00343","SJAG_16457","SJAG_04388","SJAG_01740","SJAG_03183","SJAG_04749","SJAG_01193","SJAG_04092","SJAG_01771","SJAG_04191","SJAG_04084","SJAG_03745","SJAG_03143","SJAG_04036","SJAG_04813","SJAG_02370","SJAG_03421","SJAG_03346","SJAG_01694","SJAG_01436","SJAG_00269","SJAG_05322","SJAG_04712","SJAG_04249","SJAG_06638","SJAG_03126","SJAG_00686","SJAG_02239","SJAG_03590","SJAG_04006","SJAG_04321","SJAG_04350","SJAG_01150","SJAG_02252","SJAG_02773","SJAG_01919","SJAG_02383","SJAG_03981","SJAG_04009","SJAG_02698","SJAG_00854","SJAG_03519","SJAG_00973","SJAG_02213","SJAG_00759","SJAG_05343","SJAG_01805","SJAG_06599","SJAG_03157","SJAG_00210","SJAG_03179","SJAG_02540","SJAG_02057","SJAG_00966","SJAG_06576","SJAG_05313","SJAG_01916","SJAG_00164","SJAG_00987","SJAG_01625","SJAG_02415","SJAG_03061","SJAG_00342","SJAG_02730","SJAG_00150","SJAG_00297","SJAG_04705","SJAG_03573","SJAG_04647","SJAG_01040","SJAG_00822","SJAG_04407","SJAG_00641","SJAG_04820","SJAG_05203","SJAG_00792","SJAG_02058","SJAG_02218","SJAG_03241","SJAG_01521","SJAG_01243","SJAG_04611","SJAG_04099","SJAG_03967","SJAG_05247","SJAG_05010","SJAG_03597","SJAG_01952","SJAG_04890","SJAG_02849","SJAG_01878","SJAG_01113","SJAG_02671","SJAG_01062","SJAG_00996","SJAG_04421","SJAG_02311","SJAG_03501","SJAG_05288","SJAG_01764"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[76141,77928,112311,80024,74679,58572],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[118413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[92010],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060212"},{"annotations":[92588,96248,102399,106783,107768,115748,104717,93420,97572,105582,116187,118603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[70881,98378,76959,100252,60178,115449,79879,98464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[74125,91123,94673,90128,77939,70707,79301,75881,92941,95842,115961,116904,92843,80062],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[92011],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[66774,117530,91124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[70630,80125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032786"},{"annotations":[89816,118714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[92502,75691,111236,74432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[106972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120272"},{"annotations":[73142,90039,105235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060213"},{"annotations":[88302,93839,106974,89805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"},{"annotations":[90050,79924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[78312,75780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000234"},{"annotations":[112272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"},{"annotations":[78890,76404,73525,78309,79893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045943"},{"annotations":[102545,73765,104759,111033,108774,102591,73307,80211,73780,97852,116579,75189,66657,70723,76581,70627,97853,61277,77801,97257,102464,119395,62167,99826,78410,79966,109353,76255,72841,98901,108887,63117,65544,103482,117673,71810,118534,96024,63389,103012,98743,75259,108946,68918,71131,78950,79851,109118,72485,94150,77111,93094,75998,71728,76160,99618,117287,108282,109996,107887,107725,95419,74164,115136,112188,116769,100820,67812,97854,95863,112059,100809,112601,119394,97850,69039,71176,97851,79455,97621,87758,74201,77765,69779,94712,72252,94056,69571,80122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045944"},{"annotations":[78428,71350,79935,117296,106365,71901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"},{"annotations":[115037,115600,99348,103990,96196,94677,106016,109060,109033,106366,94788,102272,95716,90707,87795,106688,103729,106555,91020,119233,98999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving RNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"positively_regulates","term_name":"RNA metabolic 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regulation of RNA metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of RNA metabolic process","type":"narrow"},{"name":"positive regulation of RNA metabolism","type":"exact"},{"name":"stimulation of RNA metabolic process","type":"narrow"},{"name":"up regulation of RNA metabolic process","type":"exact"},{"name":"up-regulation of RNA metabolic process","type":"exact"},{"name":"upregulation of RNA metabolic process","type":"exact"}],"termid":"GO:0051254","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0032786":null,"GO:0032968":null,"GO:0036450":null,"GO:0045899":null,"GO:0045943":null,"GO:0045944":null,"GO:0048026":null,"GO:0060212":null,"GO:0060213":null,"GO:0060261":null,"GO:0060963":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:0120272":null,"GO:1904595":null,"GO:1905746":null,"GO:1990074":null,"GO:2000234":null}}


id: PBO:0049788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 23","termid":"PBO:0049788"}


id: PBO:0046863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarylacetoacetate hydrolase domain containing 2A","termid":"PBO:0046863"}


id: PBO:0055630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3069","termid":"PBO:0055630"}


id: PBO:0017807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Niemann-Pick disease type C2 protein hE1 homolog Npc2 (predicted)","termid":"PBO:0017807"}


id: PBO:0090292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1/S-specific B-type cyclin Cig1","termid":"PBO:0090292"}


id: PBO:0045838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 28","termid":"PBO:0045838"}


id: PBO:0084294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Intracellular sporulation-specific glucoamylase; involved in glycogen degradation; induced during starvation of a/a diploids late in sporulation, but dispensable for sporulation","termid":"PBO:0084294"}


id: PATO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an bearer by virtue of the bearer's extension in one dimension.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-D extent","synonyms":[{"name":"1-D size","type":"exact"}],"termid":"PATO:0001708"}


id: MONDO:0859162
data:
  {"annotated_genes":["SJAG_02550"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86909],"is_not":false,"summary":null,"term":"MONDO:0859162"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with infantile epileptic spasms","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1781627","OMIM:619373","UMLS:C5543538"],"termid":"MONDO:0859162","terms_by_termid":{"MONDO:0859162":null},"xrefs":{"Monarch":{"xref_id":"0859162"}}}


id: FYPO:0006751
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 in heterochromatin at subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PMID:29632066","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K4 trimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"increased histone H3 K4 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 trimethylation at subtelomeres during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 trimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K4 trimethylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"increased histone H3K4me3 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K4 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006751"}


id: MONDO:0030066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic granulomatous disease","termid":"MONDO:0018305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"granulomatous disease, chronic, autosomal recessive, 5","secondary_identifiers":["UMLS:C5394542","GARD:16395","MEDGEN:1710326","OMIM:618935","DOID:0070368"],"synonyms":[{"name":"CGD5","type":"exact"},{"name":"GRANULOMATOUS DISEASE, CHRONIC, AUTOSOMAL RECESSIVE, 5","type":"exact"},{"name":"Granulomatous Disease, Chronic, Due to Cybc1 Deficiency","type":"exact"},{"name":"chronic granulomatous disease 5, autosomal recessive","type":"exact"},{"name":"granulomatous disease, chronic, autosomal recessive, 5","type":"exact"}],"termid":"MONDO:0030066","xrefs":{"Monarch":{"xref_id":"0030066"}}}


id: PBO:0090013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1 heme lyase Cyt2","termid":"PBO:0090013"}


id: PBO:0081025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 7A","termid":"PBO:0081025"}


id: PBO:0060478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NANOGNB pseudogene 3","termid":"PBO:0060478"}


id: GO:0102593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-methylanthranilate + UDP-alpha-D-glucose = N-methylanthraniloyl-beta-D-glucopyranose + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose: N-methylanthranilate glucosyltransferase activity (obsolete GO:0102593)","termid":"GO:0102593"}


id: FYPO:0003814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to the S phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) does not occur. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["GO:0072429","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased rate of DNA replication during cellular response to DNA damage","termid":"FYPO:0004241"},{"relation_name":"is_a","term_name":"abnormal S-phase DNA damage checkpoint","termid":"FYPO:0000007"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"abolished response to S-phase DNA damage checkpoint signaling","synonyms":[{"name":"abolished response to S-phase DNA damage checkpoint signaling abolished","type":"exact"},{"name":"abolished response to S-phase DNA damage checkpoint signaling during mitotic cell cycle","type":"related"},{"name":"abolished response to S-phase DNA damage checkpoint signaling during vegetative growth","type":"exact"},{"name":"abolished response to intra-S DNA damage checkpoint signaling","type":"exact"},{"name":"abolished response to mitotic S-phase DNA damage checkpoint signaling","type":"exact"}],"termid":"FYPO:0003814"}


id: PBO:0046425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A10","termid":"PBO:0046425"}


id: GO:1900114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K9 trimethylation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K9 trimethylation (obsolete GO:1900114)","synonyms":[{"name":"activation of histone H3-K9 trimethylation","type":"narrow"},{"name":"up regulation of histone H3-K9 trimethylation","type":"exact"},{"name":"up-regulation of histone H3-K9 trimethylation","type":"exact"},{"name":"upregulation of histone H3-K9 trimethylation","type":"exact"}],"termid":"GO:1900114"}


id: GO:0034458
data:
  {"annotated_genes":["SJAG_01152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74391],"is_not":false,"summary":null,"term":"GO:0034458"}]},"cv_name":"molecular_function","definition":"Unwinding of an RNA helix in the 3' to 5' direction, driven by ATP hydrolysis.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA helicase activity","termid":"GO:0003724"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"3'-5' RNA helicase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9836927","GO:0034459","EC:5.6.2.6"],"synonyms":[{"name":"3' to 5' RNA helicase activity","type":"exact"},{"name":"ATP-dependent 3' to 5' RNA helicase activity","type":"exact"},{"name":"ATP-dependent 3'-5' RNA helicase activity","type":"exact"}],"termid":"GO:0034458","terms_by_termid":{"GO:0034458":null}}


id: PBO:0005036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD synthetase (predicted)","termid":"PBO:0005036"}


id: CHEBI:58088
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 3-phosphate(3-)","termid":"CHEBI:58088"}


id: FYPO:0000520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of oxidative phosphorylation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular respiration","termid":"FYPO:0000565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased oxidative phosphorylation","synonyms":[{"name":"increased oxidative phosphorylation during mitotic cell cycle","type":"related"},{"name":"increased oxidative phosphorylation during vegetative growth","type":"exact"},{"name":"oxidative phosphorylation: increased","type":"related"}],"termid":"FYPO:0000520"}


id: GO:0019982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-7.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-7 binding","synonyms":[{"name":"IL-7 binding","type":"exact"}],"termid":"GO:0019982"}


id: PBO:0089312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan glucosidase Exg2","termid":"PBO:0089312"}


id: PBO:0068058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 363","termid":"PBO:0068058"}


id: GO:0006025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of galactosaminoglycans, any of a group of polysaccharides that contain amino sugars derived from the galactose.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete galactosaminoglycan biosynthetic process (obsolete GO:0006025)","synonyms":[{"name":"galactosaminoglycan anabolism","type":"exact"},{"name":"galactosaminoglycan biosynthesis","type":"exact"},{"name":"galactosaminoglycan formation","type":"exact"},{"name":"galactosaminoglycan synthesis","type":"exact"}],"termid":"GO:0006025"}


id: PBO:0061002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHP2 ribonucleoprotein pseudogene 2","termid":"PBO:0061002"}


id: GO:0010581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An process which modulate the frequency, rate or extent of starch biosynthesis, the chemical reactions and pathways resulting in the formation of starch.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucan biosynthetic process","termid":"GO:0010962"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"regulates","term_name":"starch biosynthetic process","termid":"GO:0019252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of starch biosynthetic process","termid":"GO:0010581"}


id: FYPO:0006912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing clomiphene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002060","FYPO:0002057","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on clomiphene","synonyms":[{"name":"normal cell population growth in presence of clomiphene","type":"exact"},{"name":"normal cell population growth on clomiphene","type":"exact"},{"name":"normal cellular response to clomiphene","type":"related"},{"name":"normal vegetative cell population growth on clomiphene","type":"exact"}],"termid":"FYPO:0006912"}


id: MONDO:1012285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular arrhythmias and sudden death, non-human animal","termid":"MONDO:1011645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular arrhythmias and sudden death, dog","secondary_identifiers":["OMIA:001040-9615"],"termid":"MONDO:1012285","xrefs":{"Monarch":{"xref_id":"1012285"}}}


id: GO:0009276
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The peptidoglycan layer of the Gram-negative cell envelope. In Gram-negative cells the peptidoglycan is relatively thin (1-2nm) and is linked to the outer membrane by lipoproteins. In Gram-negative cells the peptidoglycan is too thin to retain the primary stain in the Gram staining procedure and therefore cells appear red after Gram stain.","definition_xrefs":["GOC:mlg","ISBN:0815108893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan-based cell wall","termid":"GO:0009274"},{"relation_name":"part_of","term_name":"cell envelope","termid":"GO:0030313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"Gram-negative-bacterium-type cell wall","synonyms":[{"name":"1-2nm peptidoglycan-based cell wall","type":"exact"},{"name":"cell wall inner membrane","type":"exact"}],"termid":"GO:0009276"}


id: MONDO:0100475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of ichthyosis vulgaris in which the disease presentation is severe in severity. Homozygous FLG mutation carriers often have more severe manifestations.","definition_xrefs":["PMID:23301728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant ichthyosis vulgaris","termid":"MONDO:0007810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"severe ichthyosis vulgaris","termid":"MONDO:0100475","xrefs":{"Monarch":{"xref_id":"0100475"}}}


id: PR:Q12706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psk1 gene.","definition_xrefs":["UniProtKB:Q12706","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase psk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.08","synonyms":[{"name":"Spom972h-psk1","type":"exact"}],"termid":"PR:Q12706"}


id: PBO:0061852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin 2","termid":"PBO:0061852"}


id: MONDO:0015278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial pancreatic carcinoma is defined by the presence of pancreatic cancer (PC) in two or more first-degree relatives.","definition_xrefs":["Orphanet:1333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"familial pancreatic carcinoma","secondary_identifiers":["OMIM:260350","SCTID:715414009","icd11.foundation:1385362916","NCIT:C43298","UMLS:C2931038","GARD:4206","MEDGEN:419700","MESH:C535837"],"synonyms":[{"name":"familial pancreatic cancer","type":"exact"},{"name":"familial pancreatic carcinoma","type":"exact"},{"name":"hereditary exocrine pancreatic carcinoma","type":"exact"},{"name":"hereditary pancreatic cancer","type":"exact"},{"name":"hereditary pancreatic carcinoma","type":"exact"},{"name":"pancreatic acinar carcinoma","type":"related"},{"name":"pancreatic cancer, somatic","type":"exact"},{"name":"pancreatic carcinoma, somatic","type":"exact"}],"termid":"MONDO:0015278","xrefs":{"Monarch":{"xref_id":"0015278"}}}


id: PATO:0002385
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines, usually parallel, with at least one salient angle on the margin","definition_xrefs":["FNA:FNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated","termid":"PATO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striate-angular","termid":"PATO:0002385"}


id: PBO:0038605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase 2","termid":"PBO:0038605"}


id: PBO:0002050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S14 (predicted)","termid":"PBO:0002050"}


id: FYPO:0007919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which alternative polyadenylation of RNA is abnormal. RNA alternative polyadenylation generates RNA molecules with variable 3'-end lengths from a given RNA by differential use of cleavage and polyadenylation signals. Includes differences in the relative usage levels of alternative polyadenylation sites.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal RNA alternative polyadenylation","termid":"FYPO:0007919"}


id: GO:0009127
data:
  {"annotated_genes":["SJAG_02850","SJAG_02364","SJAG_01081","SJAG_01070","SJAG_00964","SJAG_01298","SJAG_01814","SJAG_01859","SJAG_00044","SJAG_04123","SJAG_06634","SJAG_04634","SJAG_03355","SJAG_04681","SJAG_01661","SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79181,77151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[72092,65565,77123,60147,64558,57099,70286,58002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[57088,74295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[59501,63136,75080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[75995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[65070,75996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[75997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine nucleoside monophosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate biosynthetic process","termid":"GO:0009124"},{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine nucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine nucleoside monophosphate anabolism","type":"exact"},{"name":"purine nucleoside monophosphate biosynthesis","type":"exact"},{"name":"purine nucleoside monophosphate formation","type":"exact"},{"name":"purine nucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009127","terms_by_termid":{"GO:0006177":null,"GO:0006189":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044208":null,"GO:0044209":null}}


id: GO:0034426
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a etioplast and form the etioplast envelope.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"etioplast envelope","termid":"GO:0034425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"etioplast membrane","termid":"GO:0034426"}


id: GO:1904597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of wound healing connective tissue replacement, which may be replaced with fibrotic material, that occurs as part of an inflammatory response.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:krc","PMID:18245812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of connective tissue replacement involved in inflammatory response wound healing","termid":"GO:1904596"},{"relation_name":"is_a","term_name":"negative regulation of connective tissue replacement","termid":"GO:1905204"},{"relation_name":"negatively_regulates","term_name":"connective tissue replacement involved in inflammatory response wound healing","termid":"GO:0002248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of connective tissue replacement involved in inflammatory response wound healing","synonyms":[{"name":"down regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"down regulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"down regulation of fibrosis during inflammatory response","type":"narrow"},{"name":"down-regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"down-regulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"down-regulation of fibrosis during inflammatory response","type":"narrow"},{"name":"downregulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"downregulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"downregulation of fibrosis during inflammatory response","type":"narrow"},{"name":"inhibition of connective tissue replacement during inflammatory response","type":"related"},{"name":"inhibition of connective tissue replacement involved in inflammatory response wound healing","type":"narrow"},{"name":"inhibition of fibrosis during inflammatory response","type":"narrow"},{"name":"negative regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"negative regulation of fibrosis during inflammatory response","type":"narrow"}],"termid":"GO:1904597"}


id: PBO:0072688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX family transcription factor 1","termid":"PBO:0072688"}


id: FYPO:0003172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in M phase under conditions where arrest does not normally occur, and the cell does not form a septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic M phase without septation","synonyms":[{"name":"abnormal cell cycle arrest in mitotic M phase without cytokinesis","type":"related"},{"name":"abnormal cell cycle arrest in mitotic M phase without septation, normal cell size","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in M phase without septation","type":"exact"},{"name":"abnormal nuclear division arrest without septation (normal cell length)","type":"exact"}],"termid":"FYPO:0003172"}


id: GO:1903053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extracellular matrix organization.","definition_xrefs":["GO_REF:0000058","PMID:22357537","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of extracellular matrix organization","synonyms":[{"name":"regulation of extracellular matrix organisation","type":"exact"},{"name":"regulation of extracellular matrix organization and biogenesis","type":"related"}],"termid":"GO:1903053"}


id: GO:0140552
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that is composed of the one DNA binding protein of the TEAD family and the transcriptional coactivator YAP.","definition_xrefs":["GOC:mah","PMID:11358867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TEAD-YAP complex","secondary_identifiers":["CORUM:2870","GO:0071150","GO:0071147","GO:0071148","GO:0071151","GO:0071149"],"synonyms":[{"name":"TEAD-1-YAP complex","type":"narrow"},{"name":"TEAD-2 multiprotein complex","type":"narrow"},{"name":"TEAD-2-YAP complex","type":"narrow"},{"name":"TEAD-3-YAP complex","type":"narrow"},{"name":"TEAD-4-YAP complex","type":"narrow"}],"termid":"GO:0140552"}


id: PBO:0034188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-visits","termid":"PBO:0034188"}


id: PBO:0065733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 4","termid":"PBO:0065733"}


id: GO:0097186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the formation of tooth enamel, occurring in two stages: secretory stage and maturation stage.","definition_xrefs":["PMID:21196346","GOC:cjm","GOC:sl","PMID:10206335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amelogenesis","synonyms":[{"name":"enamel development","type":"exact"}],"termid":"GO:0097186"}


id: MONDO:0005389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sclerosing cholangitis (obsolete MONDO:0005389)","termid":"MONDO:0005389","xrefs":{"Monarch":{"xref_id":"0005389"}}}


id: PBO:0058374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4746","termid":"PBO:0058374"}


id: GO:0031040
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle of ciliated protozoan cells that contains a diploid copy of the cell's complete genome. Sections of contiguous sequence in the macronucleus are often interrupted by internal eliminated sequences (IES), and may be permuted, in micronuclei. Genic transcription is not found in micronuclei. Some ciliate species may contain multiple micronuclei per cell.","definition_xrefs":["GOC:ns"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"micronucleus","secondary_identifiers":["Wikipedia:Micronucleus"],"termid":"GO:0031040"}


id: GO:0042151
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle found in cnidoblast (nematoblast) cells. When matured, these stinging organelles store toxins and can deliver them when the cnidocil (a short extension of the cnidocyst) is stimulated by a prey or another stimulus.","definition_xrefs":["DOI:10.1139/z02-135","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"nematocyst","secondary_identifiers":["Wikipedia:Cnidocyte"],"synonyms":[{"name":"cnidocyst","type":"exact"}],"termid":"GO:0042151"}


id: MONDO:1010320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Corneal dystrophy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneal dystrophy, non-human animal","secondary_identifiers":["OMIA:000230"],"termid":"MONDO:1010320","xrefs":{"Monarch":{"xref_id":"1010320"}}}


id: PBO:0066470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rieske Fe-S domain containing","termid":"PBO:0066470"}


id: GO:0047587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5alpha-ergosta-7,22-diene-3beta,5-diol = ergosterol + H2O.","definition_xrefs":["RHEA:22064","EC:4.2.1.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"5-alpha-hydroxysteroid dehydratase activity","secondary_identifiers":["MetaCyc:5-ALPHA-HYDROXYSTEROID-DEHYDRATASE-RXN","KEGG_REACTION:R03675"],"synonyms":[{"name":"5alpha-ergosta-7,22-diene-3beta,5-diol 5,6-hydro-lyase (ergosterol-forming)","type":"related"},{"name":"5alpha-ergosta-7,22-diene-3beta,5-diol 5,6-hydro-lyase activity","type":"related"},{"name":"5alpha-hydroxysteroid dehydratase activity","type":"related"}],"termid":"GO:0047587"}


id: PBO:0111464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA N1-methyladenine (m1A58) demethylase","termid":"PBO:0111464"}


id: PBO:0046566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 8, envelope","termid":"PBO:0046566"}


id: PBO:0017457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inheres_in","termid":"PBO:0017457"}


id: MONDO:0032721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia, kondo-fu type","secondary_identifiers":["MEDGEN:1683128","UMLS:C5193071","NORD:2027","DOID:0112283","OMIM:618392"],"synonyms":[{"name":"SEDKF","type":"related"},{"name":"SPONDYLOEPIPHYSEAL DYSPLASIA, KONDO-FU TYPE","type":"related"},{"name":"Sed With Elevated Blood Lysosomal Enzymes","type":"related"}],"termid":"MONDO:0032721","xrefs":{"Monarch":{"xref_id":"0032721"}}}


id: PATO:0000004
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of inhering in a bearer by virtue of the bearer's disposition to move freely.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobility","termid":"PATO:0000004"}


id: MONDO:0034022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Bethlem myopathy","termid":"MONDO:0008029"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"Bethlem myopathy 2","secondary_identifiers":["UMLS:C4225313","MEDGEN:907426","GARD:16121","Orphanet:536516","OMIM:616471"],"synonyms":[{"name":"BTHLM2","type":"exact"},{"name":"Bethlem myopathy 2","type":"exact"},{"name":"Bethlem myopathy caused by mutation in COL12A1","type":"exact"},{"name":"Bethlem myopathy type 2","type":"exact"},{"name":"COL12A1 Bethlem myopathy","type":"exact"},{"name":"EDS, myopathic type","type":"exact"},{"name":"Ehlers-Danlos syndrome, myopathic type","type":"exact"},{"name":"myopathic EDS","type":"exact"},{"name":"myopathic Ehlers-Danlos syndrome","type":"exact"}],"termid":"MONDO:0034022","xrefs":{"Monarch":{"xref_id":"0034022"}}}


id: GO:0015375
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycine(out) + Na+(out) = glycine(in) + Na+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid:sodium symporter activity","termid":"GO:0005295"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"glycine transmembrane transporter activity","termid":"GO:0015187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glycine:sodium symporter activity","secondary_identifiers":["GO:0015656","Reactome:R-HSA-444120","RHEA:68228","Reactome:R-HSA-5660840"],"termid":"GO:0015375"}


id: MONDO:0004122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, small cell, poorly differentiated thymic neuroendocrine carcinoma, characterized by the presence of a high mitotic rate and numerous apoptotic bodies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"thymic neuroendocrine carcinoma","termid":"MONDO:0020516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymus small cell carcinoma","secondary_identifiers":["EFO:1000578","NCIT:C6460","DOID:7142","UMLS:C1335980","MEDGEN:234784"],"synonyms":[{"name":"Thymus small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of Thymus","type":"exact"},{"name":"small cell carcinoma of the Thymus","type":"exact"},{"name":"small cell carcinoma of thymus","type":"exact"},{"name":"thymic small cell carcinoma","type":"exact"},{"name":"thymic small cell carcinoma neuroendocrine type","type":"exact"},{"name":"thymus small cell carcinoma","type":"exact"}],"termid":"MONDO:0004122","xrefs":{"Monarch":{"xref_id":"0004122"}}}


id: MONDO:0018198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute encephalopathy with biphasic seizures and late reduced diffusion (AESD) is a rare childhood-onset epilepsy syndrome associated with infection and characterized by a biphasic clinical course. The initial symptom is a prolonged febrile seizure on day 1 (the first phase). Afterwards, patients have variable levels of consciousness from normal to coma. Irrespective of the consciousness levels, magnetic resonance imaging (MRI) during the first 2 days shows no abnormality. During the second phase (usually days 4 - 6), patients show a cluster of seizures and deterioration of consciousness. Diffusion-weighted images (DWI) on MRI reveal the brain lesions with reduced diffusion predominantly in the subcortical white matter. After the second acute phase, consciousness levels improve with the emerging focal neurological signs. Neurological outcomes of AESD vary from normal to mild or severe sequelae including cerebral atrophy, mental retardation, paralysis and epilepsy.","definition_xrefs":["Orphanet:363549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"acute encephalopathy with biphasic seizures and late reduced diffusion","secondary_identifiers":["NANDO:2100247","NANDO:1200552","NANDO:2200901","MEDGEN:1645136","SCTID:766044005","UMLS:C4707658","GARD:21552"],"synonyms":[{"name":"AESD","type":"exact"},{"name":"AIEF","type":"exact"},{"name":"acute infantile encephalopathy predominantly affecting the frontal lobes","type":"exact"}],"termid":"MONDO:0018198","xrefs":{"Monarch":{"xref_id":"0018198"}}}


id: GO:0034586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 21U-RNAs, a class of single-stranded RNA molecules of about 21 nucleotides in length characterized by a uridine 5'-monophosphate and a modified 3' end resistant to periodate degradation. 21U-RNAs are derived from distinct, autonomously expressed loci within the genome.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"is_a","term_name":"21U-RNA metabolic process","termid":"GO:0034585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"21U-RNA catabolic process","synonyms":[{"name":"21U-RNA breakdown","type":"exact"},{"name":"21U-RNA catabolism","type":"exact"},{"name":"21U-RNA degradation","type":"exact"}],"termid":"GO:0034586"}


id: MONDO:0009139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"dyssegmental dysplasia, Rolland-Desbuquois type","secondary_identifiers":["MEDGEN:98145","MESH:C537999","UMLS:C0432209","GARD:9810","SCTID:95243004","icd11.foundation:1291444727","ICD9:756.59","Orphanet:156731","OMIM:224400"],"synonyms":[{"name":"Anisospondylic Camptomicromelic dwarfism, Rolland-Desbuquois type","type":"related"},{"name":"Anisospondylic camptomicromelic dwarfism Rolland-Desbuquois type","type":"related"},{"name":"Ddrd","type":"related"},{"name":"dyssegmental dwarfism Rolland-Desbuquois type","type":"related"},{"name":"dyssegmental dwarfism, Rolland-Desbuquois type","type":"related"},{"name":"dyssegmental dysplasia Rolland-Desbuquois type","type":"related"},{"name":"dyssegmental dysplasia, Rolland-Desbuquois type","type":"exact"}],"termid":"MONDO:0009139","xrefs":{"Monarch":{"xref_id":"0009139"}}}


id: MONDO:0005426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infarct detected by MRI and not determined to be clinically significant","definition_xrefs":["EFO:0004715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain infarction","termid":"MONDO:0005394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRI defined brain infarct","termid":"MONDO:0005426","xrefs":{"Monarch":{"xref_id":"0005426"}}}


id: GO:0030512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta receptor signaling pathway","termid":"GO:0017015"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090101"},{"relation_name":"negatively_regulates","term_name":"transforming growth factor beta receptor signaling pathway","termid":"GO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transforming growth factor beta receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-2173788"],"synonyms":[{"name":"down regulation of transforming growth factor beta receptor signaling pathway","type":"exact"},{"name":"down-regulation of transforming growth factor beta receptor signaling pathway","type":"exact"},{"name":"downregulation of transforming growth factor beta receptor signaling pathway","type":"exact"},{"name":"inhibition of transforming growth factor beta receptor signaling pathway","type":"narrow"},{"name":"negative regulation of TGF-beta receptor signaling pathway","type":"exact"},{"name":"negative regulation of TGFbeta receptor signaling pathway","type":"exact"},{"name":"negative regulation of transforming growth factor beta receptor signalling pathway","type":"exact"}],"termid":"GO:0030512"}


id: GO:0072677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an eosinophil within or between different tissues and organs of the body.","definition_xrefs":["GOC:BHF","GOC:mah","CL:0000771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte migration","termid":"GO:0097530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil migration","termid":"GO:0072677"}


id: PR:Q9HDV3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP19A11.07c gene.","definition_xrefs":["UniProtKB:Q9HDV3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hid-1 family protein P19A11.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.07c","synonyms":[{"name":"Down-regulated in multiple cancers 1 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBP19A11.07c","type":"exact"}],"termid":"PR:Q9HDV3"}


id: PBO:0054074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1424","termid":"PBO:0054074"}


id: GO:0039517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host protein serine/threonine phosphatase activity.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein serine/threonine phosphatase activity (obsolete GO:0039517)","synonyms":[{"name":"modulation by virus of protein serine/threonine phosphatase activity in host","type":"exact"},{"name":"regulation by virus of host protein serine/threonine phosphatase activity","type":"exact"}],"termid":"GO:0039517"}


id: MONDO:0011342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"SLC35A1-CDG is an extremely rare form of CDG syndrome characterized clinically in the single reported case by repeated hemorrhagic incidents, including severe pulmonary hemorrhage.","definition_xrefs":["Orphanet:238459"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"SLC35A1-congenital disorder of glycosylation","secondary_identifiers":["GARD:12409","DOID:0070258","MEDGEN:370234","MESH:C567040","SCTID:723624008","UMLS:C1970344","OMIM:603585"],"synonyms":[{"name":"CDG IIf","type":"related"},{"name":"CDG syndrome type IIf","type":"exact"},{"name":"CDG-IIf","type":"exact"},{"name":"CDG2F","type":"exact"},{"name":"CMP-sialic acid transporter deficiency","type":"exact"},{"name":"SLC35A1-CDG","type":"exact"},{"name":"SLC35A1-CDG (CDG-IIf)","type":"related"},{"name":"SLC35A1-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIf","type":"exact"},{"name":"congenital disorder of glycosylation type 2f","type":"exact"},{"name":"congenital disorder of glycosylation type IIf","type":"exact"},{"name":"congenital disorder of glycosylation, type IIf","type":"related"}],"termid":"MONDO:0011342","xrefs":{"Monarch":{"xref_id":"0011342"}}}


id: GO:0005869
data:
  {"annotated_genes":["SJAG_01739","SJAG_03673","SJAG_05185","SJAG_00397","SJAG_00140"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[67925,76997,80788,95538,111358],"is_not":false,"summary":null,"term":"GO:0005869"}]},"cv_name":"cellular_component","definition":"A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00140":null,"SJAG_00397":null,"SJAG_01739":null,"SJAG_03673":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0015629","GO:0032991"],"is_obsolete":false,"name":"dynactin complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005869","terms_by_termid":{"GO:0005869":null}}


id: MONDO:0024387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sex cord-stromal tumor arising from the ovary, without metastatic potential.","definition_xrefs":["NCIT:C6803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"ovarian sex cord-stromal tumor","termid":"MONDO:0021657"},{"relation_name":"is_a","term_name":"sex cord-stromal benign neoplasm","termid":"MONDO:0024988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign ovarian sex cord-stromal tumor","secondary_identifiers":["DOID:0080370","MEDGEN:231435","UMLS:C1332528"],"synonyms":[{"name":"Sex cord stromal tumor, benign","type":"exact"},{"name":"benign Sex cord-stromal neoplasm of ovary","type":"exact"},{"name":"benign Sex cord-stromal neoplasm of the ovary","type":"exact"},{"name":"benign Sex cord-stromal tumor of ovary","type":"exact"},{"name":"benign Sex cord-stromal tumor of the ovary","type":"exact"},{"name":"benign Sex cord-stromal tumour of ovary","type":"exact"},{"name":"benign Sex cord-stromal tumour of the ovary","type":"exact"},{"name":"benign ovarian Sex cord-stromal neoplasm","type":"exact"},{"name":"benign ovarian Sex cord-stromal tumor","type":"exact"},{"name":"benign ovarian Sex cord-stromal tumour","type":"exact"},{"name":"ovarian SEX cord-stromal tumor, benign","type":"exact"},{"name":"ovarian sex cord-stromal tumor, benign","type":"exact"}],"termid":"MONDO:0024387","xrefs":{"Monarch":{"xref_id":"0024387"}}}


id: MONDO:0700250
data:
  {"annotated_genes":["SJAG_03046"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87560],"is_not":false,"summary":null,"term":"MONDO:0700250"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03046":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex IV deficiency, nuclear type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:220110","MEDGEN:1750917","GARD:15158","DOID:0070491","UMLS:C5435656"],"termid":"MONDO:0700250","terms_by_termid":{"MONDO:0700250":null},"xrefs":{"Monarch":{"xref_id":"0700250"}}}


id: PBO:0005012
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.23","termid":"PBO:0005012"}


id: PBO:0089631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthine synthase Dph5","termid":"PBO:0089631"}


id: PBO:0028278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-merotelic_kinetochore_attachment_during_mitosis","termid":"PBO:0028278"}


id: PBO:0063910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma","termid":"PBO:0063910"}


id: PBO:0034755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING family histone acetyltransferase complex PHD-type zinc finger subunit Png2","termid":"PBO:0034755"}


id: PBO:0043643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 5","termid":"PBO:0043643"}


id: PBO:0027750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_nitrogen_starvation","termid":"PBO:0027750"}


id: PBO:0062720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily R member 1 pseudogene","termid":"PBO:0062720"}


id: PBO:0086801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YCL001W-A gene has similarity to DOM34 and is present in a region duplicated between chromosomes XIV and III","termid":"PBO:0086801"}


id: GO:0045174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dehydroascorbate + 2 glutathione = L-ascorbate + glutathione disulfide.","definition_xrefs":["RHEA:24424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione disulfide oxidoreductase activity","termid":"GO:0015038"},{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor","termid":"GO:0016672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0015036"}],"interesting_parent_ids":["GO:0015036","GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glutathione dehydrogenase (ascorbate) activity","secondary_identifiers":["Reactome:R-HSA-198813","KEGG_REACTION:R01108","EC:1.8.5.1","MetaCyc:1.8.5.1-RXN"],"synonyms":[{"name":"DHA reductase activity","type":"related"},{"name":"GDOR","type":"related"},{"name":"dehydroascorbate reductase activity","type":"exact"},{"name":"dehydroascorbic acid reductase activity","type":"related"},{"name":"dehydroascorbic reductase activity","type":"related"},{"name":"glutathione dehydroascorbate reductase activity","type":"related"},{"name":"glutathione:dehydroascorbate oxidoreductase activity","type":"related"},{"name":"glutathione:dehydroascorbic acid oxidoreductase activity","type":"related"}],"termid":"GO:0045174"}


id: PBO:0084394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA","termid":"PBO:0084394"}


id: GO:0072126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in kidney development","termid":"GO:1901724"},{"relation_name":"positively_regulates","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glomerular mesangial cell proliferation","termid":"GO:0072126"}


id: FYPO:0004971
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more messenger RNAs that are normally expressed during a cellular response to stress measured in a cell is lower than normal (i.e. lower than observed in wild-type cells during vegetative growth) during a cellular response to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of stress responsive gene mRNA during vegetative growth","termid":"FYPO:0005908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of stress responsive gene mRNA during cellular response to phosphate starvation","synonyms":[{"name":"decreased level of cellular response to stress gene mRNA during cellular response to phosphate starvation","type":"exact"},{"name":"decreased level of stress responsive gene RNA during cellular response to phosphate starvation","type":"exact"},{"name":"decreased level of stress responsive gene mRNA during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"decreased level of stress responsive gene mRNA during cellular response to phosphate starvation during vegetative growth","type":"exact"},{"name":"decreased level of stress responsive gene transcripts during cellular response to phosphate starvation","type":"exact"},{"name":"decreased mRNA level of stress responsive genes during cellular response to phosphate starvation","type":"exact"},{"name":"decreased stress responsive gene mRNA accumulation during cellular response to phosphate starvation","type":"related"},{"name":"reduced level of stress responsive gene mRNA during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0004971"}


id: GO:0019467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ornithine by decarboxylation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine catabolic process","termid":"GO:0006593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"ornithine catabolic process, by decarboxylation","secondary_identifiers":["MetaCyc:ORNDEG-PWY"],"synonyms":[{"name":"ornithine breakdown, by decarboxylation","type":"exact"},{"name":"ornithine degradation, by decarboxylation","type":"exact"}],"termid":"GO:0019467"}


id: PBO:0078857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 5","termid":"PBO:0078857"}


id: MONDO:0100182
data:
  {"annotated_genes":["SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010943"}]},"cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing schizophrenia.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01903":null},"genotype_count":0,"is_obsolete":false,"name":"schizophrenia, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2675945","MEDGEN:390920"],"termid":"MONDO:0100182","terms_by_termid":{"MONDO:0010943":null},"xrefs":{"Monarch":{"xref_id":"0100182"}}}


id: PR:Q9UTN6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A global transcription activator SNF2L2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit snf21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.01","secondary_identifiers":["UniProtKB:Q9UTN6"],"synonyms":[{"name":"ATP-dependent helicase snf21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RSC complex subunit snf21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SMARCA2","type":"exact"}],"termid":"PR:Q9UTN6"}


id: GO:1903191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glyoxal.","definition_xrefs":["GO_REF:0000068","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"glyoxal metabolic process","termid":"GO:1903189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyoxal biosynthetic process","synonyms":[{"name":"glyoxal anabolism","type":"exact"},{"name":"glyoxal biosynthesis","type":"exact"},{"name":"glyoxal formation","type":"exact"},{"name":"glyoxal synthesis","type":"exact"}],"termid":"GO:1903191"}


id: PBO:0059887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 10","termid":"PBO:0059887"}


id: GO:0071423
data:
  {"annotated_genes":["SJAG_01406","SJAG_02140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67747],"is_not":false,"summary":null,"term":"GO:0071423"},{"annotations":[101970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098714"}]},"cv_name":"biological_process","definition":"A process in which a malate ion is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate transport","termid":"GO:0015743"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01406":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"malate transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"malate membrane transport","type":"exact"},{"name":"transmembrane malate transport","type":"exact"}],"termid":"GO:0071423","terms_by_termid":{"GO:0071423":null,"GO:0098714":null}}


id: GO:1901128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving gentamycin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"gentamycin metabolic process","synonyms":[{"name":"gentamycin metabolism","type":"exact"}],"termid":"GO:1901128"}


id: PBO:0064104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIWIL4 antisense RNA 1","termid":"PBO:0064104"}


id: PBO:0049997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 3","termid":"PBO:0049997"}


id: MONDO:0800359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 64","secondary_identifiers":["MEDGEN:482676","UMLS:C3281046"],"synonyms":[{"name":"RP64","type":"exact"}],"termid":"MONDO:0800359","xrefs":{"Monarch":{"xref_id":"0800359"}}}


id: PBO:0046241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 35","termid":"PBO:0046241"}


id: GO:0010120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of camalexin, an indole phytoalexin.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole phytoalexin biosynthetic process","termid":"GO:0009700"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"camalexin metabolic process","termid":"GO:0052317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0006790"],"is_obsolete":false,"name":"camalexin biosynthetic process","secondary_identifiers":["MetaCyc:CAMALEXIN-SYN"],"synonyms":[{"name":"camalexin anabolism","type":"exact"},{"name":"camalexin biosynthesis","type":"exact"},{"name":"camalexin formation","type":"exact"},{"name":"camalexin synthesis","type":"exact"}],"termid":"GO:0010120"}


id: MONDO:1012133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin G deficiency, non-human animal","termid":"MONDO:1011727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin G deficiency, horse","secondary_identifiers":["OMIA:000554-9796"],"termid":"MONDO:1012133","xrefs":{"Monarch":{"xref_id":"1012133"}}}


id: GO:0170067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arginine (2-amino-5-guanidinopentanoic acid) via the intermediate compound N-acetyl-L-citrulline.","definition_xrefs":["PMID:16585758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-arginine biosynthetic process","termid":"GO:0006526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-arginine biosynthetic process via N-acetyl-L-citrulline","secondary_identifiers":["MetaCyc:PWY-5154"],"synonyms":[{"name":"arginine biosynthesis via N-acetyl intermediates","type":"exact"},{"name":"arginine biosynthesis, N-acetylated pathway","type":"exact"}],"termid":"GO:0170067"}


id: GO:0070465
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha1-beta1 integrin complex bound to a type VI collagen triple helix containing an alpha3(VI) chain.","definition_xrefs":["PMID:8387021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha1-beta1 integrin-alpha3(VI) complex","synonyms":[{"name":"ITGA1-ITGB1-COL6A3 complex","type":"narrow"}],"termid":"GO:0070465"}


id: MONDO:0009983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinitis pigmentosa - intellectual disability - deafness - hypogenitalism is an extremely rare syndromic retinitis pigmentosa characterized by pigmentary retinopathy, diabetes mellitus with hyperinsulinism, acanthosis nigricans, secondary cataracts, neurogenic deafness, short stature mild hypogonadism in males and polycystic ovaries with oligomenorrhea in females. Inheritance is thought to be autosomal recessive. It can be distinguished from Alstrom syndrome by the presence of intellectual disability and the absence of renal insufficiency. There have been no further descriptions in the literature since 1993.","definition_xrefs":["Orphanet:3085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa-intellectual disability-deafness-hypogenitalism syndrome","secondary_identifiers":["GARD:4683","OMIM:268020","MEDGEN:340317","UMLS:C1849401","MESH:C564841"],"synonyms":[{"name":"insulin-resistant diabetes with acanthosis nigricans, hypogonadism, pigmentary retinopathy, deafness, and intellectual disability","type":"related"},{"name":"insulin-resistant diabetes with acanthosis nigricans, hypogonadism, pigmentary retinopathy, deafness, and mental retardation","type":"related"},{"name":"retinitis pigmentosa, deafness, intellectual disability, and hypogonadism","type":"related"},{"name":"retinitis pigmentosa, deafness, mental retardation, and hypogonadism","type":"related"},{"name":"retinitis pigmentosa-intellectual disability- labyrinthine deafness-hypogenitalism syndrome","type":"exact"},{"name":"retinitis pigmentosa-intellectual disability-deafness-hypogonadism syndrome","type":"related"},{"name":"retinitis pigmentosa-intellectual disability-sensorineural hearing loss-hypogenitalism syndrome","type":"exact"}],"termid":"MONDO:0009983","xrefs":{"Monarch":{"xref_id":"0009983"}}}


id: GO:0010875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cholesterol efflux. Cholesterol efflux is the directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol efflux","termid":"GO:0010874"},{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"positively_regulates","term_name":"cholesterol efflux","termid":"GO:0033344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholesterol efflux","termid":"GO:0010875"}


id: PBO:0084275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; required for the fusion of ER-derived COPII transport vesicles with the Golgi; interacts with Yip1p and Yos1p; localizes to the Golgi, the ER, and COPII vesicles; homolog of human YIPF3","termid":"PBO:0084275"}


id: GO:0097477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a lateral motor column neuron from one site to another. A lateral motor column neuron is a motor neuron that is generated only on limb levels and send axons into the limb mesenchyme.","definition_xrefs":["GOC:yaf","CL:0011002","PMID:20711475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord motor neuron migration","termid":"GO:0097476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral motor column neuron migration","termid":"GO:0097477"}


id: MONDO:0003042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mesenchymal chondrosarcoma occurring in adults.","definition_xrefs":["NCIT:C27375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal chondrosarcoma","termid":"MONDO:0006853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult mesenchymal chondrosarcoma","secondary_identifiers":["UMLS:C1332207","DOID:4547","MEDGEN:272296"],"synonyms":[{"name":"adult mesenchymal chondrosarcoma","type":"exact"},{"name":"mesenchymal chondrosarcoma of adults","type":"exact"}],"termid":"MONDO:0003042","xrefs":{"Monarch":{"xref_id":"0003042"}}}


id: PBO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.3.3","termid":"PBO:0000692"}


id: PBO:0060347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin XVB","termid":"PBO:0060347"}


id: MONDO:0008097
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86236],"is_not":false,"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"Linear nevus sebaceous syndrome (LNSS) is characterized by the association of a large sebaceous nevus, usually appearing on the face or on the scalp, with a broad spectrum of abnormalities that may affect every organ system, including the central nervous system (brain neoplasms, hemimegalencephaly and lateral ventricle enlargement).","definition_xrefs":["Orphanet:2612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"palpebral nevus","termid":"MONDO:0020179"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"linear nevus sebaceous syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1692","NCIT:C4678","OMIM:163200","MEDGEN:1646345","UMLS:C4552097","DOID:0111530","GARD:10291"],"synonyms":[{"name":"Epidermal Nevus syndrome, formerly","type":"related"},{"name":"JNP","type":"related"},{"name":"Jadassohn Nevus phakomatosis","type":"related"},{"name":"Jadassohn nevus phakomatosis","type":"related"},{"name":"Nevus Sebaceus Syndrome","type":"exact"},{"name":"Nevus sebaceous of Jadassohn","type":"exact"},{"name":"Nevus sebaceus of Jadassohn","type":"exact"},{"name":"Nevus sebaceus syndrome","type":"exact"},{"name":"SCHIMMELPENNING-FEUERSTEIN-MIMS syndrome","type":"related"},{"name":"SFM","type":"related"},{"name":"SFM syndrome","type":"related"},{"name":"Schimmelpenning Feuerstein Mims syndrome","type":"related"},{"name":"Schimmelpenning syndrome","type":"exact"},{"name":"Schimmelpenning-Feuerstein-Mims syndrome, somatic mosaic","type":"exact"},{"name":"Sfm syndrome","type":"related"},{"name":"Solomon syndrome","type":"exact"},{"name":"epidermal nevus syndrome","type":"related"},{"name":"linear sebaceous Nevus","type":"exact"},{"name":"linear sebaceous Nevus syndrome","type":"related"},{"name":"organoid Nevus","type":"exact"},{"name":"organoid Nevus phakomatosis","type":"related"},{"name":"organoid nevus phakomatosis","type":"related"},{"name":"organoid nevus syndrome","type":"exact"},{"name":"sebaceous Nevus syndrome, linear","type":"related"},{"name":"sebaceous nevus syndrome linear","type":"related"}],"termid":"MONDO:0008097","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0008097"}}}


id: MONDO:0022634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptodactyly vertebral fusion","secondary_identifiers":["MESH:C537973","MEDGEN:444116","UMLS:C2931682"],"synonyms":[{"name":"camptodactyly and sacral vertebral fusion","type":"related"},{"name":"camptodactyly and sacral vertebral fusion (subtype)","type":"related"}],"termid":"MONDO:0022634","xrefs":{"Monarch":{"xref_id":"0022634"}}}


id: MONDO:0017415
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87485,87486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008338"},{"annotations":[87510,87511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020746"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis syndrome","termid":"MONDO:0015225"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"multiple pterygium syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1632","Orphanet:294060","DOID:0080110","MEDGEN:1852087","GARD:21177","ICD9:755.8","MESH:C537377","UMLS:C5848053","SCTID:205819008","icd11.foundation:834369371"],"synonyms":[{"name":"Pterygium Syndrome, Multiple","type":"exact"},{"name":"pterygium syndrome","type":"related"}],"termid":"MONDO:0017415","terms_by_termid":{"MONDO:0008338":null,"MONDO:0020746":null},"xrefs":{"Monarch":{"xref_id":"0017415"}}}


id: PBO:0109119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 3, actin N3(tau)-histidine methyltransferase","termid":"PBO:0109119"}


id: PBO:0047126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 169 member A","termid":"PBO:0047126"}


id: PBO:0001441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein Byr3","termid":"PBO:0001441"}


id: GO:1905464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA duplex unwinding.","definition_xrefs":["GO_REF:0000058","PMID:26503245","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA duplex unwinding (obsolete GO:1905464)","synonyms":[{"name":"activation of DNA duplex unwinding","type":"narrow"},{"name":"activation of DNA unwinding","type":"narrow"},{"name":"activation of duplex DNA melting","type":"narrow"},{"name":"positive regulation of DNA unwinding","type":"exact"},{"name":"positive regulation of duplex DNA melting","type":"exact"},{"name":"up regulation of DNA duplex unwinding","type":"exact"},{"name":"up regulation of DNA unwinding","type":"exact"},{"name":"up regulation of duplex DNA melting","type":"exact"},{"name":"up-regulation of DNA duplex unwinding","type":"exact"},{"name":"up-regulation of DNA unwinding","type":"exact"},{"name":"up-regulation of duplex DNA melting","type":"exact"},{"name":"upregulation of DNA duplex unwinding","type":"exact"},{"name":"upregulation of DNA unwinding","type":"exact"},{"name":"upregulation of duplex DNA melting","type":"exact"}],"termid":"GO:1905464"}


id: MONDO:0005926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete poliomyelitis (obsolete MONDO:0005926)","termid":"MONDO:0005926","xrefs":{"Monarch":{"xref_id":"0005926"}}}


id: CHEBI:75142
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal","termid":"CHEBI:75142"}


id: PBO:0001564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase subunit Rfp1","termid":"PBO:0001564"}


id: GO:0020005
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a symbiont-containing vacuole, derived from both the host and symbiont.","definition_xrefs":["GOC:jl","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"symbiont-containing vacuole","termid":"GO:0020003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"symbiont-containing vacuole membrane","synonyms":[{"name":"parasitophorous vacuolar membrane","type":"exact"}],"termid":"GO:0020005"}


id: PATO:0000938
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's exhibiting organisation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organization quality","termid":"PATO:0002264"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organized","termid":"PATO:0000938"}


id: GO:0061949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the discharge, by sperm, of a single, anterior secretory granule before the sperm reaches to the zona pellucida of the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the exocytosis of the acrosomal contents.","definition_xrefs":["PMID:22228629","PMID:23430248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"premature acrosome loss","termid":"GO:0061948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of premature acrosome loss","termid":"GO:0061949"}


id: PATO:0000377
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000377 frequency value (obsolete PATO:0000377)","termid":"PATO:0000377"}


id: MONDO:0004926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lacrimal sac.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute inflammation of lacrimal passage","termid":"MONDO:0004055"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"nasolacrimal duct disorder","termid":"MONDO:0044984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dacryocystitis","secondary_identifiers":["icd11.foundation:1034960983","DOID:9938","MEDGEN:3686","NCIT:C34521","MESH:D003607","SCTID:85777005","UMLS:C0010930","ICD9:375.30"],"synonyms":[{"name":"Dacryoadenitides","type":"exact"},{"name":"Dacryocystitides","type":"exact"},{"name":"dacryoadenitis","type":"related"},{"name":"inflammation of lacrimal sac","type":"exact"},{"name":"lacrimal sac inflammation","type":"exact"}],"termid":"MONDO:0004926","xrefs":{"Monarch":{"xref_id":"0004926"}}}


id: PR:P26359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msh3 gene.","definition_xrefs":["UniProtKB:P26359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA mismatch repair protein msh3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.03","synonyms":[{"name":"MutS protein homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-msh3","type":"exact"},{"name":"mating-type switching protein swi4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P26359"}


id: PBO:0062541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily H member 1 pseudogene","termid":"PBO:0062541"}


id: GO:0009617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bacterium","secondary_identifiers":["GO:0009680","GO:0009618","Reactome:R-HSA-9824439"],"synonyms":[{"name":"response to bacteria","type":"exact"}],"termid":"GO:0009617"}


id: MONDO:0009275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neonatal hemochromatosis is a disease in which too much iron builds up inthe body. In this form of hemochromatosis the iron overload begins before birth. This disease tends to progress rapidly and is characterized by liver damage that is apparent at birth or in the first day of life. There are a number of other forms of hemochromatosis. To learn more about these other forms click on the disease names listed below: Hemochromatosis type 1 Hemochromatosis type 2 Hemochromatosis type 3 Hemochromatosis type 4","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemochromatosis","termid":"MONDO:0006507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"neonatal hemochromatosis","secondary_identifiers":["MESH:C536394","UMLS:C0268059","Orphanet:446","MEDGEN:82768","NORD:1494","GARD:7172","NCIT:C129980","OMIM:231100"],"synonyms":[{"name":"Nh","type":"related"},{"name":"Nhc","type":"related"},{"name":"alloimmune Hepatitis, congenital","type":"related"},{"name":"giant cell Hepatitis","type":"related"},{"name":"giant cell Hepatitis (formerly)","type":"related"},{"name":"giant cell Hepatitis, formerly","type":"related"},{"name":"hemochromatosis neonatal","type":"related"},{"name":"hemochromatosis, neonatal","type":"related"},{"name":"idiopathic neonatal hemochromatosis","type":"related"},{"name":"neonatal Hepatitis","type":"related"},{"name":"neonatal Hepatitis, formerly","type":"related"},{"name":"neonatal hepatitis (formerly)","type":"related"}],"termid":"MONDO:0009275","xrefs":{"Monarch":{"xref_id":"0009275"}}}


id: GO:0036498
data:
  {"annotated_genes":["SJAG_04435","SJAG_00790"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89860,93441],"is_not":false,"summary":null,"term":"GO:0036498"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by the endoplasmic reticulum stress sensor IRE1 (Inositol-requiring transmembrane kinase/endonuclease). Begins with activation of IRE1 in response to endoplasmic reticulum (ER) stress, and ends with regulation of a downstream cellular process, e.g. transcription. One target of activated IRE1 is the transcription factor HAC1 in yeast, or XBP1 in mammals; IRE1 cleaves an intron of a mRNA coding for HAC1/XBP1 to generate an activated HAC1/XBP1 transcription factor, which controls the up regulation of UPR-related genes. At least in mammals, IRE1 can also signal through additional intracellular pathways including JNK and NF-kappaB.","definition_xrefs":["PMID:22013210","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00790":null,"SJAG_04435":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"IRE1-mediated unfolded protein response","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-381070"],"synonyms":[{"name":"ERN1-mediated unfolded protein response","type":"related"},{"name":"IRE1 branch of UPR","type":"exact"},{"name":"IRE1 signal transduction pathway","type":"broad"},{"name":"IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"IRE1alpha unfolded protein response","type":"narrow"},{"name":"IRE1p unfolded protein response","type":"narrow"},{"name":"UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"inositol-requiring enzyme 1-mediated unfolded protein response","type":"related"},{"name":"inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"}],"termid":"GO:0036498","terms_by_termid":{"GO:0036498":null}}


id: GO:0048904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line neuromast cupula over time, from its formation to the mature structure. The cupula is secreted by mantle cells and the ciliary bundles of all of the hair cells of the neuromast are embedded in it. The cupula provides a mechanical linkage between the hair cells and the external hydrodynamic environment. The cupula of superficial neuromasts grows continuously, while the height of the cupula of canal neuromasts is limited by canal diameter.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cupula development","termid":"GO:0048887"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast development","termid":"GO:0048901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast cupula development","termid":"GO:0048904"}


id: GO:1901200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any negative regulation of calcium ion transport into cytosol that is involved in cellular response to salt stress.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transport into cytosol","termid":"GO:0010523"},{"relation_name":"part_of","term_name":"cellular response to salt stress","termid":"GO:0071472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium ion transport into cytosol involved in cellular response to salt stress","synonyms":[{"name":"negative regulation of calcium ion transport into cytosol involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"negative regulation of calcium ion transport into cytosol involved in cellular salinity response","type":"exact"}],"termid":"GO:1901200"}


id: GO:1990982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The immune response against a previously encountered antigen being quicker and quantitatively better compared with the primary response.","definition_xrefs":["PMID:26831526"],"gene_count":0,"genotype_count":0,"name":"obsolete Immune memory response (obsolete GO:1990982)","termid":"GO:1990982"}


id: GO:0090401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular senescence process associated with the dismantling of a cell as a response to viral infection.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete viral-induced premature senescence (obsolete GO:0090401)","termid":"GO:0090401"}


id: GO:0009974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: zeinoxanthin + NADPH + O2 + H+ = lutein + NADP+ + H2O. Adds a hydroxyl group to the epsilon ring of the alpha-carotene.","definition_xrefs":["PMID:8837513"],"gene_count":0,"genotype_count":0,"name":"obsolete zeinoxanthin epsilon hydroxylase activity (obsolete GO:0009974)","termid":"GO:0009974"}


id: GO:1904603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of advanced glycation end-product receptor activity.","definition_xrefs":["GOC:krc","GO_REF:0000059","GOC:TermGenie","PMID:16503878"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of advanced glycation end-product receptor activity (obsolete GO:1904603)","synonyms":[{"name":"regulation of AGE receptor activity","type":"exact"},{"name":"regulation of RAGE activity","type":"exact"}],"termid":"GO:1904603"}


id: PBO:0048020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric chelate reductase 1 like","termid":"PBO:0048020"}


id: MONDO:1012532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"calvarial hyperostotic syndrome, non-human animal","termid":"MONDO:1011658"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calvarial hyperostotic syndrome, dog","secondary_identifiers":["OMIA:002245-9615"],"termid":"MONDO:1012532","xrefs":{"Monarch":{"xref_id":"1012532"}}}


id: GO:0010089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the principal water-conducting tissue of a vascular plant.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phloem or xylem histogenesis","termid":"GO:0010087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylem development","synonyms":[{"name":"xylem histogenesis","type":"exact"}],"termid":"GO:0010089"}


id: PBO:0001440
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Sty1","termid":"PBO:0001440"}


id: PR:O74439
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ggc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C1682.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.09c","synonyms":[{"name":"Spom972h-ggc1","type":"exact"}],"termid":"PR:O74439"}


id: PBO:0027738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphatase_activity","termid":"PBO:0027738"}


id: PBO:0001823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoisocitrate dehydrogenase","termid":"PBO:0001823"}


id: GO:1903901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of viral life cycle.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18005716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of viral process","termid":"GO:0048525"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"negatively_regulates","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of viral life cycle","synonyms":[{"name":"down regulation of lytic viral life cycle","type":"related"},{"name":"down regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"down regulation of viral infectious cycle","type":"related"},{"name":"down regulation of viral life cycle","type":"exact"},{"name":"down regulation of viral replication","type":"related"},{"name":"down-regulation of lytic viral life cycle","type":"related"},{"name":"down-regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"down-regulation of viral infectious cycle","type":"related"},{"name":"down-regulation of viral life cycle","type":"exact"},{"name":"down-regulation of viral replication","type":"related"},{"name":"downregulation of lytic viral life cycle","type":"related"},{"name":"downregulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"downregulation of viral infectious cycle","type":"related"},{"name":"downregulation of viral life cycle","type":"exact"},{"name":"downregulation of viral replication","type":"related"},{"name":"inhibition of lytic viral life cycle","type":"related"},{"name":"inhibition of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"inhibition of viral infectious cycle","type":"related"},{"name":"inhibition of viral life cycle","type":"narrow"},{"name":"inhibition of viral replication","type":"related"},{"name":"negative regulation of lytic viral life cycle","type":"related"},{"name":"negative regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"negative regulation of viral infectious cycle","type":"related"},{"name":"negative regulation of viral replication","type":"related"}],"termid":"GO:1903901"}


id: PBO:0057366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ai","termid":"PBO:0057366"}


id: FYPO:0004403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of JM216 (also called satraplatin) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to JM216","synonyms":[{"name":"resistance to JM216 during mitotic cell cycle","type":"related"},{"name":"resistance to JM216 during vegetative growth","type":"exact"},{"name":"resistance to satraplatin","type":"exact"},{"name":"resistant to JM216","type":"exact"}],"termid":"FYPO:0004403"}


id: PBO:0089288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, R3H domain-containing","termid":"PBO:0089288"}


id: GO:0019878
data:
  {"annotated_genes":["SJAG_00502","SJAG_04688","SJAG_00869","SJAG_02388","SJAG_01955","SJAG_01630","SJAG_01061","SJAG_03312","SJAG_01574"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64435,65078,70505,75413,76443,77016,77825,96691,113756],"is_not":false,"summary":null,"term":"GO:0019878"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine by the aminoadipic pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process","termid":"GO:0009085"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00502":null,"SJAG_00869":null,"SJAG_01061":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01955":null,"SJAG_02388":null,"SJAG_03312":null,"SJAG_04688":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lysine biosynthetic process via aminoadipic acid","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"lysine biosynthesis, aminoadipic acid pathway","type":"exact"},{"name":"lysine biosynthesis, aminoadipic pathway","type":"exact"},{"name":"lysine biosynthetic process, aminoadipic acid pathway","type":"exact"},{"name":"lysine biosynthetic process, aminoadipic pathway","type":"exact"},{"name":"lysine formation via aminoadipic acid","type":"exact"},{"name":"lysine synthesis via aminoadipic acid","type":"exact"},{"name":"lysine anabolism via aminoadipic acid","type":"exact"}],"termid":"GO:0019878","terms_by_termid":{"GO:0019878":null}}


id: PBO:0088387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein, Tsc2 paralog","termid":"PBO:0088387"}


id: PBO:0042459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 123","termid":"PBO:0042459"}


id: PBO:0004597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set6 (predicted)","termid":"PBO:0004597"}


id: GO:1904814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to chromosome, telomeric region.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:BHF_telomere","GOC:nc","GOC:TermGenie","PMID:19487455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to chromosome, telomeric region","termid":"GO:0070198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to chromosome, telomeric region","synonyms":[{"name":"regulation of protein localisation to chromosome, telomeric region","type":"exact"},{"name":"regulation of protein localization to telomere","type":"exact"}],"termid":"GO:1904814"}


id: GO:0050384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(beta-D-ribofuranosyl)uric acid + phosphate = alpha-D-ribose 1-phosphate + H+ + urate.","definition_xrefs":["EC:2.4.2.16","RHEA:13909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"urate-ribonucleotide phosphorylase activity","secondary_identifiers":["KEGG_REACTION:R02646","MetaCyc:URATE-RIBONUCLEOTIDE-PHOSPHORYLASE-RXN"],"synonyms":[{"name":"UAR phosphorylase activity","type":"related"},{"name":"urate-ribonucleotide:phosphate D-ribosyltransferase activity","type":"related"},{"name":"urate-ribonucleotide:phosphate alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0050384"}


id: GO:0044036
data:
  {"annotated_genes":["SJAG_01290","SJAG_00598","SJAG_01288","SJAG_05285","SJAG_00816","SJAG_03057","SJAG_03587","SJAG_02916","SJAG_03705","SJAG_01787","SJAG_00610","SJAG_04462","SJAG_04483","SJAG_01017","SJAG_04666","SJAG_03123","SJAG_04906","SJAG_02192","SJAG_00876","SJAG_01264","SJAG_01255","SJAG_02278","SJAG_04770","SJAG_03646","SJAG_03082","SJAG_04236","SJAG_04668","SJAG_02222","SJAG_01021","SJAG_00218","SJAG_01276","SJAG_00667","SJAG_05001","SJAG_04327","SJAG_02519","SJAG_01028","SJAG_04184","SJAG_04659","SJAG_04771","SJAG_04864","SJAG_00424","SJAG_01171","SJAG_01835","SJAG_01453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[73430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[74922,87845,79708,78385,80783,72429,77978,77427,75151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"},{"annotations":[94360,100469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044347"},{"annotations":[73939,73757,79013,70985,71808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[76217,71261,73432,91936,116121,74863,113470,106424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[102956,78609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[102259,108376,102260,95440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[72821,107008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071966"},{"annotations":[92762,87860],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[118337,118210,91110,103159,92746,105665,106237],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[92768,95277,103161,89781],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving macromolecules forming, or destined to form, part of the cell wall. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"part_of","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00424":null,"SJAG_00598":null,"SJAG_00610":null,"SJAG_00667":null,"SJAG_00816":null,"SJAG_00876":null,"SJAG_01017":null,"SJAG_01021":null,"SJAG_01028":null,"SJAG_01171":null,"SJAG_01255":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02519":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03082":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04327":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04770":null,"SJAG_04771":null,"SJAG_04864":null,"SJAG_04906":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall macromolecule metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0010382"],"synonyms":[{"name":"cellular cell wall macromolecule metabolic process","type":"exact"},{"name":"cellular cell wall macromolecule metabolism","type":"exact"}],"termid":"GO:0044036","terms_by_termid":{"GO:0000032":null,"GO:0034412":null,"GO:0034413":null,"GO:0044347":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071966":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0085317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 3,5-bisphosphate (PtdIns[3,5]P) phosphatase; required for efficient mating and response to osmotic shock; physically associates with and regulated by Vac14p; contains a SAC1-like domain; homologous to human FIG4, which is associated with CMT4J, a form of Charcot-Marie-Tooth disorder","termid":"PBO:0085317"}


id: GO:0014055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of acetylcholine by a cell. The acetylcholine acts as a neurotransmitter that acts in both the peripheral nervous system (PNS) and central nervous system (CNS).","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"acetylcholine secretion","termid":"GO:0061526"},{"relation_name":"part_of","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"acetylcholine secretion, neurotransmission","termid":"GO:0014055"}


id: PBO:0074665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 51","termid":"PBO:0074665"}


id: GO:0048350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of paraxial mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate specification","termid":"GO:0048337"},{"relation_name":"is_a","term_name":"regulation of paraxial mesodermal cell fate specification","termid":"GO:0048349"},{"relation_name":"positively_regulates","term_name":"paraxial mesodermal cell fate specification","termid":"GO:0048348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of paraxial mesodermal cell fate specification","synonyms":[{"name":"activation of paraxial mesodermal cell fate specification","type":"narrow"},{"name":"stimulation of paraxial mesodermal cell fate specification","type":"narrow"},{"name":"up regulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"up-regulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"upregulation of paraxial mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048350"}


id: MONDO:0957316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epidermolytic hyperkeratosis (obsolete MONDO:0957316)","termid":"MONDO:0957316","xrefs":{"Monarch":{"xref_id":"0957316"}}}


id: GO:1903818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of voltage-gated potassium channel activity.","definition_xrefs":["PMID:19219384","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of potassium ion transmembrane transporter activity","termid":"GO:1901018"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of voltage-gated potassium channel activity","synonyms":[{"name":"activation of voltage gated potassium channel activity","type":"narrow"},{"name":"activation of voltage-dependent potassium channel activity","type":"narrow"},{"name":"activation of voltage-gated potassium channel activity","type":"narrow"},{"name":"activation of voltage-gated potassium ion channel activity","type":"narrow"},{"name":"activation of voltage-sensitive potassium channel","type":"narrow"},{"name":"positive regulation of voltage gated potassium channel activity","type":"exact"},{"name":"positive regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"positive regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"positive regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"up regulation of voltage gated potassium channel activity","type":"exact"},{"name":"up regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity","type":"exact"},{"name":"up regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"up regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"up-regulation of voltage gated potassium channel activity","type":"exact"},{"name":"up-regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"up-regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"upregulation of voltage gated potassium channel activity","type":"exact"},{"name":"upregulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity","type":"exact"},{"name":"upregulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"upregulation of voltage-sensitive potassium channel","type":"exact"}],"termid":"GO:1903818"}


id: FYPO:0003696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more free large ribosomal subunits in the cytosol than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cytosolic large ribosomal subunit level","synonyms":[{"name":"cytosolic large ribosomal subunit present at increased level","type":"exact"},{"name":"increased 60S ribosomal subunit level","type":"exact"},{"name":"increased cytosolic large ribosomal subunit level during mitotic cell cycle","type":"related"},{"name":"increased cytosolic large ribosomal subunit level during vegetative growth","type":"exact"},{"name":"increased large ribosomal subunit level","type":"broad"},{"name":"increased level of cytosolic large ribosomal subunits","type":"related"}],"termid":"FYPO:0003696"}


id: PBO:0039204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 7","termid":"PBO:0039204"}


id: GO:0048707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during instar larval or pupal development, by which anatomical structures are generated and organized.","definition_xrefs":["GOC:rc","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"instar larval or pupal development","termid":"GO:0002165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"instar larval or pupal morphogenesis","termid":"GO:0048707"}


id: FYPO:0006340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endocytosis occurs only at the old end of the cell during interphase of the mitotic cell cycle. Normally, endocytosis takes place at the old cell end throughout interphase, and also at the new end after NETO.","definition_xrefs":["PomBase:mah","PMID:16141239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"endocytosis restricted to old cell end","synonyms":[{"name":"endocytosis abolished at new cell end","type":"exact"},{"name":"endocytosis restricted to old cell end during interphase of mitotic cell cycle","type":"exact"},{"name":"endocytosis restricted to old cell end during mitotic interphase","type":"exact"},{"name":"endocytosis restricted to old cell end during vegetative growth","type":"exact"},{"name":"endocytosis restricted to old cell tip","type":"exact"}],"termid":"FYPO:0006340"}


id: GO:0038176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the SREBP signaling pathway in response to a decrease in oxygen levels.","definition_xrefs":["PMID:22017871","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of SREBP signaling pathway","termid":"GO:2000640"},{"relation_name":"part_of","term_name":"cellular response to decreased oxygen levels","termid":"GO:0036294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of SREBP signaling pathway in response to decreased oxygen levels","synonyms":[{"name":"positive regulation of SREBP-mediated signaling pathway in absence of oxygen","type":"related"},{"name":"positive regulation of SREBP-mediated signaling pathway in response to decreased oxygen levels","type":"exact"}],"termid":"GO:0038176"}


id: GO:0051129
data:
  {"annotated_genes":["SJAG_01464","SJAG_02700","SJAG_04699","SJAG_02336","SJAG_02723","SJAG_02514","SJAG_01894","SJAG_01679","SJAG_00364","SJAG_01680","SJAG_04943","SJAG_01716","SJAG_00883","SJAG_03072","SJAG_04455","SJAG_03681","SJAG_00855","SJAG_00369","SJAG_04638","SJAG_04884","SJAG_00229","SJAG_05978","SJAG_01837","SJAG_01297","SJAG_00279","SJAG_03353","SJAG_04126","SJAG_02451","SJAG_02169","SJAG_01386","SJAG_00304","SJAG_04999","SJAG_03255","SJAG_04259","SJAG_03581","SJAG_03327","SJAG_03438","SJAG_06270","SJAG_01993","SJAG_04287","SJAG_03508","SJAG_03126","SJAG_01082","SJAG_01330","SJAG_03048","SJAG_00460","SJAG_03455","SJAG_03592","SJAG_00823","SJAG_00526","SJAG_03591","SJAG_04203","SJAG_00266","SJAG_01825","SJAG_02795","SJAG_04369","SJAG_01790"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76057,80555,79524,92666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[116202,91063,112268,108563,114574,99912,107544,114086,104208],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[114801,106634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[114564,106931,89401,116361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[99756,110213,106636,102113,114804,115859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[74791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[98600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[94918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045806"},{"annotations":[118251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[116606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[102363,106770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010637"},{"annotations":[102681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[103593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[94538],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[102686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[106968,77632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[108280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[108802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[107411,95972,93804,99914,91067,93270,101592,73126,107546,110477,105361,116205,93186,92072,107851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[106577,106673,115641,92081,106895,107716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045875"},{"annotations":[101770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061192"},{"annotations":[114091],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[116976],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[101655],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell structures, including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"negatively_regulates","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00266":null,"SJAG_00279":null,"SJAG_00304":null,"SJAG_00364":null,"SJAG_00369":null,"SJAG_00460":null,"SJAG_00526":null,"SJAG_00823":null,"SJAG_00855":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01679":null,"SJAG_01680":null,"SJAG_01716":null,"SJAG_01790":null,"SJAG_01825":null,"SJAG_01837":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_02514":null,"SJAG_02700":null,"SJAG_02723":null,"SJAG_02795":null,"SJAG_03048":null,"SJAG_03072":null,"SJAG_03126":null,"SJAG_03255":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03438":null,"SJAG_03455":null,"SJAG_03508":null,"SJAG_03581":null,"SJAG_03591":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04203":null,"SJAG_04259":null,"SJAG_04287":null,"SJAG_04369":null,"SJAG_04455":null,"SJAG_04638":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04943":null,"SJAG_04999":null,"SJAG_05978":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular component organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell organization","type":"exact"},{"name":"down-regulation of cell organization","type":"exact"},{"name":"downregulation of cell organization","type":"exact"},{"name":"inhibition of cell organization","type":"narrow"},{"name":"negative regulation of cell organisation","type":"related"},{"name":"negative regulation of cellular component organization and biogenesis","type":"related"}],"termid":"GO:0051129","terms_by_termid":{"GO:0007094":null,"GO:0010637":null,"GO:0031030":null,"GO:0034316":null,"GO:0045128":null,"GO:0045806":null,"GO:0045875":null,"GO:0051016":null,"GO:0051598":null,"GO:0060906":null,"GO:0061188":null,"GO:0061192":null,"GO:0090258":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1903500":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1905560":null,"GO:1905757":null,"GO:2000432":null,"GO:2000816":null}}


id: PBO:0089566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding TFAR19-related protein, human Programmed cell death protein 5 ortholog","termid":"PBO:0089566"}


id: PBO:0050015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, C","termid":"PBO:0050015"}


id: PBO:0028296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_stress_responsive_gene_mRNA_during_vegetative_growth","termid":"PBO:0028296"}


id: _global:process_has_causal_agent
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Inverse of 'causal agent in process'","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"_global:causally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"process_has_causal_agent","secondary_identifiers":["RO:0002608"],"termid":"_global:process_has_causal_agent"}


id: FYPO:0004919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of a molecular function is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal regulation of molecular function","synonyms":[{"name":"normal regulation of molecular function during mitotic cell cycle","type":"related"},{"name":"normal regulation of molecular function during vegetative growth","type":"exact"}],"termid":"FYPO:0004919"}


id: PBO:0058833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8063","termid":"PBO:0058833"}


id: PR:O14095
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin domain-containing protein 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01642","PANTHER:PTHR21148:SF11","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein plp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.12c","secondary_identifiers":["UniProtKB:O14095"],"synonyms":[{"name":"Spom972h-TXNDC9","type":"exact"},{"name":"phosducin-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14095"}


id: PBO:0036423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga7","termid":"PBO:0036423"}


id: GO:0015076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of heavy metal ions into, out of or within a cell, or between cells. Heavy metals are those that can form a coordination bond with a protein, as opposed to an alkali or alkaline-earth metal that can only form an ionic bond; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal ion transporter activity (obsolete GO:0015076)","synonyms":[{"name":"heavy metal ion transporter activity","type":"exact"}],"termid":"GO:0015076"}


id: GO:0005204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin sulfate proteoglycan (obsolete GO:0005204)","synonyms":[{"name":"chondroitin sulfate proteoglycan","type":"exact"},{"name":"chondroitin sulphate proteoglycan","type":"exact"}],"termid":"GO:0005204"}


id: PBO:0077698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tankyrase 2","termid":"PBO:0077698"}


id: MONDO:0011986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tropical pancreatitis is a rare pancreatic disease of juvenile onset occurring mainly in tropical developing countries and characterized by chronic non-alcoholic pancreatitis manifesting with abdominal pain, steatorrhea and fibrocalculous pancreatopathy. It is also commonly associated with the development of pancreatic calculi and pancreatic cancer at a much higher frequency than seen in ordinary chronic pancreatitis.","definition_xrefs":["Orphanet:103918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary chronic pancreatitis","termid":"MONDO:0008185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"tropical pancreatitis","secondary_identifiers":["icd11.foundation:1645607956","MESH:C564276","OMIM:608189","SCTID:724540009","GARD:16946","MEDGEN:334069","UMLS:C1842402"],"synonyms":[{"name":"TCP","type":"exact"},{"name":"fibrocalculous pancreatic diabetes, susceptibility to","type":"related"},{"name":"tropical calcific chronic pancreatitis","type":"exact"},{"name":"tropical calcific pancreatitis","type":"related"}],"termid":"MONDO:0011986","xrefs":{"Monarch":{"xref_id":"0011986"}}}


id: GO:0031323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular metabolic process (obsolete GO:0031323)","synonyms":[{"name":"regulation of cellular metabolism","type":"exact"}],"termid":"GO:0031323"}


id: MONDO:0005752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Circumscribed collections of suppurative material occurring in the spinal or intracranial epidural space. The majority of epidural abscesses occur in the spinal canal and are associated with osteomyelitis of a vertebral body; analgesia, epidural; and other conditions. Clinical manifestations include local and radicular pain, weakness, sensory loss, urinary incontinence, and fecal incontinence. Cranial epidural abscesses are usually associated with osteomyelitis of a cranial bone, sinusitis, or otitis media. (From Adams et al., Principles of Neurology, 6th ed, p710 and pp1240-1; J Neurol Neurosurg Psychiatry 1998 Aug;65(2):209-12)","definition_xrefs":["MESH:D020802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"},{"relation_name":"is_a","term_name":"central nervous system neoplasm","termid":"MONDO:0006130"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidural abscess","secondary_identifiers":["UMLS:C0270629","DOID:11387","MEDGEN:82848","EFO:0007260","SCTID:61974008"],"synonyms":[{"name":"abscess epidural","type":"exact"},{"name":"extradural intraspinal abscess","type":"exact"},{"name":"intraspinal epidural abscess","type":"exact"},{"name":"intraspinal extradural abscess","type":"exact"},{"name":"spinal epidural abscess","type":"exact"},{"name":"spinal epidural abscess (disorder)","type":"exact"},{"name":"spinal extradural abscess","type":"exact"}],"termid":"MONDO:0005752","xrefs":{"Monarch":{"xref_id":"0005752"}}}


id: PBO:0078253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 28","termid":"PBO:0078253"}


id: GO:1990101
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex containing the initiator protein DnaA bound to high-affinity recognition sites in the unique origin of replication, oriC. DnaA-oriC binding is the first step in assembly of a bacterial pre-replicative complex (pre-RC) and is responsible for the timely initiation of replication once per cell cycle.","definition_xrefs":["GOC:bhm","PMID:19833870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"DnaA-oriC complex","synonyms":[{"name":"DnaA-DNA complex","type":"broad"}],"termid":"GO:1990101"}


id: GO:1900824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ergot alkaloid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of ergot alkaloid biosynthetic process","termid":"GO:1900822"},{"relation_name":"positively_regulates","term_name":"ergot alkaloid biosynthetic process","termid":"GO:0035837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ergot alkaloid biosynthetic process","synonyms":[{"name":"activation of ergot alkaloid anabolism","type":"exact"},{"name":"activation of ergot alkaloid biosynthesis","type":"exact"},{"name":"activation of ergot alkaloid biosynthetic process","type":"narrow"},{"name":"activation of ergot alkaloid formation","type":"exact"},{"name":"activation of ergot alkaloid synthesis","type":"exact"},{"name":"positive regulation of ergot alkaloid anabolism","type":"exact"},{"name":"positive regulation of ergot alkaloid biosynthesis","type":"exact"},{"name":"positive regulation of ergot alkaloid formation","type":"exact"},{"name":"positive regulation of ergot alkaloid synthesis","type":"exact"},{"name":"up regulation of ergot alkaloid anabolism","type":"exact"},{"name":"up regulation of ergot alkaloid biosynthesis","type":"exact"},{"name":"up regulation of ergot alkaloid biosynthetic process","type":"exact"},{"name":"up regulation of ergot alkaloid formation","type":"exact"},{"name":"up regulation of ergot alkaloid synthesis","type":"exact"},{"name":"up-regulation of ergot alkaloid anabolism","type":"exact"},{"name":"up-regulation of ergot alkaloid biosynthesis","type":"exact"},{"name":"up-regulation of ergot alkaloid biosynthetic process","type":"exact"},{"name":"up-regulation of ergot alkaloid formation","type":"exact"},{"name":"up-regulation of ergot alkaloid synthesis","type":"exact"},{"name":"upregulation of ergot alkaloid anabolism","type":"exact"},{"name":"upregulation of ergot alkaloid biosynthesis","type":"exact"},{"name":"upregulation of ergot alkaloid biosynthetic process","type":"exact"},{"name":"upregulation of ergot alkaloid formation","type":"exact"},{"name":"upregulation of ergot alkaloid synthesis","type":"exact"}],"termid":"GO:1900824"}


id: PBO:0074498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptosome associated protein 29","termid":"PBO:0074498"}


id: PBO:0039138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adherens junctions associated protein 1","termid":"PBO:0039138"}


id: GO:0006434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling serine to seryl-tRNA, catalyzed by seryl-tRNA synthetase. The seryl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of a serine-accetping tRNA.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"seryl-tRNA aminoacylation","termid":"GO:0006434"}


id: GO:0051059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"NF-kappaB binding","termid":"GO:0051059"}


id: PBO:0117179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTNNBIP1 antisense RNA 1","termid":"PBO:0117179"}


id: PBO:0079939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USH1 protein network component harmonin","termid":"PBO:0079939"}


id: MONDO:0006303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare squamous cell carcinoma that arises from the middle ear.","definition_xrefs":["NCIT:C6086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"middle ear carcinoma","termid":"MONDO:0003190"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"middle ear squamous cell carcinoma","secondary_identifiers":["UMLS:C1334762","DOID:5526","MEDGEN:233191","EFO:1000378"],"synonyms":[{"name":"epidermoid carcinoma of middle Ear","type":"exact"},{"name":"epidermoid carcinoma of the middle Ear","type":"exact"},{"name":"epidermoid carcinoma of the middle ear","type":"exact"},{"name":"middle Ear epidermoid carcinoma","type":"exact"},{"name":"middle ear squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of middle Ear","type":"exact"},{"name":"squamous cell carcinoma of middle ear","type":"related"},{"name":"squamous cell carcinoma of the middle Ear","type":"exact"}],"termid":"MONDO:0006303","xrefs":{"Monarch":{"xref_id":"0006303"}}}


id: MONDO:0014776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia type 42","secondary_identifiers":["DOID:0111742","GARD:17811","Orphanet:458803","UMLS:C4225205","MEDGEN:902592","NCIT:C171269","EFO:0009059","OMIM:616795"],"synonyms":[{"name":"SCA42","type":"exact"},{"name":"spinocerebellar ataxia 42","type":"exact"},{"name":"spinocerebellar ataxia type 42","type":"exact"}],"termid":"MONDO:0014776","xrefs":{"Monarch":{"xref_id":"0014776"}}}


id: PBO:0081777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705E, pseudogene","termid":"PBO:0081777"}


id: MONDO:0018546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Serotoninergic syndrome is characterized by an excess of serotonin in the central nervous system, associated with the use of various agents, including selective serotonin reuptake inhibitors (SSRIs).","definition_xrefs":["Orphanet:43116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serotonin syndrome","secondary_identifiers":["EFO:1001842","MedDRA:10040108","icd11.foundation:678764364","MEDGEN:152119","MESH:D020230","GARD:18828","SCTID:371089000","UMLS:C0699828","ICD9:333.99"],"synonyms":[{"name":"serotonergic syndrome","type":"exact"},{"name":"serotonin storm","type":"exact"},{"name":"serotonin toxicity","type":"exact"},{"name":"serotonin toxidrome","type":"exact"}],"termid":"MONDO:0018546","xrefs":{"Monarch":{"xref_id":"0018546"}}}


id: GO:0046045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of TMP, ribosylthymine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate catabolic process","termid":"GO:0009175"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"TMP metabolic process","termid":"GO:0046044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"TMP catabolic process","synonyms":[{"name":"TMP breakdown","type":"exact"},{"name":"TMP catabolism","type":"exact"},{"name":"TMP degradation","type":"exact"}],"termid":"GO:0046045"}


id: PBO:0080242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 5 (gene/pseudogene)","termid":"PBO:0080242"}


id: PBO:0016565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Arf binding gamma-adaptin ortholog Gga22","termid":"PBO:0016565"}


id: FYPO:0005047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at RNA polymerase II promoters is decreased.","definition_xrefs":["PomBase:mah","PMID:20605454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","termid":"FYPO:0004161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at RNA polymerase II promoter during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at RNA polymerase II promoter during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at RNA pol II promoter during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II promoter during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromatin at RNA polymerase II promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0005047"}


id: GO:0090677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phenotypic switching process where a cell reversibly differentiates and dedifferentiates from one cell type into another.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reversible differentiation","termid":"GO:0090677"}


id: GO:0008594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a photoreceptor cell are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a photoreceptor cell, a sensory cell that reacts to the presence of light. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"},{"relation_name":"part_of","term_name":"photoreceptor cell development","termid":"GO:0042461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell morphogenesis","synonyms":[{"name":"photoreceptor development","type":"related"}],"termid":"GO:0008594"}


id: MONDO:0800445
data:
  {"annotated_genes":["SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87437],"is_not":false,"summary":null,"term":"MONDO:0800445"}]},"cv_name":"mondo","definition":"Any Birt-Hogg-Dube (BHD) syndrome in which the cause of the disease is a variation in the FLCN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Birt-Hogg-Dube syndrome","termid":"MONDO:0800444"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Birt-Hogg-Dube syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:122","MESH:D058249","ICD9:704.8","SCTID:110985001","MedDRA:10067736","NCIT:C28244","DOID:0050676","OMIM:135150","GARD:2322"],"synonyms":[{"name":"Hornstein-Knickenberg syndrome","type":"exact"},{"name":"fibrofolliculomas with trichodiscomas and acrochordons","type":"exact"}],"termid":"MONDO:0800445","terms_by_termid":{"MONDO:0800445":null},"xrefs":{"Monarch":{"xref_id":"0800445"}}}


id: FYPO:0001649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of glutamate into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import","termid":"FYPO:0001058"},{"relation_name":"is_a","term_name":"abnormal glutamate import","termid":"FYPO:0001646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased glutamate import","synonyms":[{"name":"decreased L-glutamate import","type":"exact"},{"name":"decreased glutamate import across plasma membrane","type":"exact"},{"name":"decreased glutamate import into cell","type":"exact"},{"name":"decreased glutamate uptake","type":"exact"},{"name":"reduced glutamate import","type":"exact"}],"termid":"FYPO:0001649"}


id: PBO:0090429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase (Nem1-Spo7 complex) regulatory subunit","termid":"PBO:0090429"}


id: GO:0036202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-cassa-12,15-diene + O2 + NADPH + H+ = ent-11beta-hydroxycassa-12,15-diene + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ent-cassa-12,15-diene 11-hydroxylase activity","secondary_identifiers":["RHEA:31967","KEGG_REACTION:R09866"],"synonyms":[{"name":"ent-cassadiene C11alpha-hydroxylase activity","type":"related"}],"termid":"GO:0036202"}


id: PBO:0082348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; accelerates eIF4F-dependent assembly of 48S translation preinitiation complex (PIC), stimulating recruitment of mRNAs with long, structured 5'-UTRs; cooperates with DEAD-box RNA helicase and paralog Ded1p, stimulating PIC attachment and highly processive scanning by the 40S ribosomal subunit; protein abundance increases in response to DNA replication stress","termid":"PBO:0082348"}


id: PBO:0026981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_prospore_membrane_closure","termid":"PBO:0026981"}


id: PBO:0044350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 35","termid":"PBO:0044350"}


id: GO:0042170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a plastid and form the plastid envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"plastid envelope","termid":"GO:0009526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid membrane","termid":"GO:0042170"}


id: PBO:0053702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 904","termid":"PBO:0053702"}


id: MONDO:0002535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm characterized by a papillary growth pattern, lack of significant cytologic atypia, and a wart-like appearance.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"verrucous papilloma","secondary_identifiers":["UMLS:C0334243","NCIT:C4101","DOID:3177","MEDGEN:83114","ICDO:8051/0"],"termid":"MONDO:0002535","xrefs":{"Monarch":{"xref_id":"0002535"}}}


id: PBO:0000916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranyltranstransferase Fps1","termid":"PBO:0000916"}


id: MONDO:0100325
data:
  {"annotated_genes":["SJAG_04528"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85558],"is_not":false,"summary":null,"term":"MONDO:0100325"}]},"cv_name":"mondo","definition":"A very rare syndrome associating chondrodysplasia with dentinogenesis imperfecta.","definition_xrefs":["Orphanet:166272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontochondrodysplasia","termid":"MONDO:0031169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04528":null},"genotype_count":0,"is_obsolete":false,"name":"odontochondrodysplasia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:8717","SCTID:717823001","MEDGEN:1784281","UMLS:C5542277","OMIM:184260"],"synonyms":[{"name":"Goldblatt chondrodysplasia","type":"exact"},{"name":"Goldblatt syndrome","type":"exact"},{"name":"ODCD","type":"exact"},{"name":"chondrodysplasia-dentinogenesis imperfecta-joint laxity syndrome","type":"exact"},{"name":"odontochondrodysplasia","type":"broad"},{"name":"spondylometaphyseal dysplasia with dentinogenesis imperfecta","type":"related"}],"termid":"MONDO:0100325","terms_by_termid":{"MONDO:0100325":null},"xrefs":{"Monarch":{"xref_id":"0100325"}}}


id: PBO:0083365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene TRM5/YHR070W","termid":"PBO:0083365"}


id: PBO:0113294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proliferating cell nuclear antigen (PCNA); functions as the sliding replication clamp for DNA polymerase δ; may function as docking site for other proteins required for mitotic and meiotic chromosomal DNA replication and for DNA repair; PCNA ubiquitination at K164 plays crucial role during Okazaki fragment processing; Leu164 is essential for stable complex formation with replicative DNA polymerase δ","termid":"PBO:0113294"}


id: PBO:0050635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 1","termid":"PBO:0050635"}


id: MONDO:0013510
data:
  {"annotated_genes":["SJAG_00757"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87639],"is_not":false,"summary":null,"term":"MONDO:0013510"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial melanoma","termid":"MONDO:0018961"},{"relation_name":"excluded_subClassOf","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00757":null},"genotype_count":0,"is_obsolete":false,"name":"melanoma, cutaneous malignant, susceptibility to, 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462767","OMIM:613972","UMLS:C3151417"],"synonyms":[{"name":"CMM6","type":"related"},{"name":"melanoma, cutaneous malignant, 6","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, 6","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, type 6","type":"exact"},{"name":"susceptibility to cutaneous malignant melanoma 6","type":"related"}],"termid":"MONDO:0013510","terms_by_termid":{"MONDO:0013510":null},"xrefs":{"Monarch":{"xref_id":"0013510"}}}


id: PBO:0067185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 244, pseudogene","termid":"PBO:0067185"}


id: FYPO:0000375
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which programmed cell death by apoptosis does not occur. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["PomBase:mah","GO:0006915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal apoptotic process","termid":"FYPO:0000629"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished apoptotic process","synonyms":[{"name":"abolished apoptosis","type":"narrow"},{"name":"absent apoptotic process","type":"exact"},{"name":"apoptosis: absent","type":"related"},{"name":"apoptotic process abolished","type":"exact"}],"termid":"FYPO:0000375"}


id: PBO:0058716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6844","termid":"PBO:0058716"}


id: PBO:0038850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 18","termid":"PBO:0038850"}


id: MONDO:0019383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute disseminated encephalomyelitis (ADEM) is a demyelinating disorder of the central nervous system.","definition_xrefs":["Orphanet:83597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"},{"relation_name":"is_a","term_name":"postinfectious encephalitis","termid":"MONDO:0020068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"acute disseminated encephalomyelitis","secondary_identifiers":["ICD9:136.9","EFO:0007130","MEDGEN:4033","SCTID:83942000","UMLS:C0014059","NCIT:C34578","icd11.foundation:1390433308","GARD:8639","NORD:727","MESH:D004673","DOID:639"],"synonyms":[{"name":"ADE","type":"related"},{"name":"ADEM","type":"exact"},{"name":"acute disseminated encephalitis","type":"exact"},{"name":"acute disseminated encephalomyelitis","type":"exact"},{"name":"post-infectious encephalomyelitis","type":"exact"}],"termid":"MONDO:0019383","xrefs":{"Monarch":{"xref_id":"0019383"}}}


id: PBO:0071470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 11","termid":"PBO:0071470"}


id: GO:0140374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A defense response against viruses mediated through an innate immune response. An innate immune response is mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["PMID:31006531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"defense response to virus","termid":"GO:0051607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antiviral innate immune response","termid":"GO:0140374"}


id: PBO:0083318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF HXK1/YFR053C","termid":"PBO:0083318"}


id: PBO:0041280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 6","termid":"PBO:0041280"}


id: MONDO:0033056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic facial cleft (obsolete MONDO:0033056)","secondary_identifiers":["Orphanet:414726"],"termid":"MONDO:0033056","xrefs":{"Monarch":{"xref_id":"0033056"}}}


id: MONDO:0003105
data:
  {"annotated_genes":["SJAG_04885","SJAG_00997"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87665,87664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A disease involving the prostate gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"is_obsolete":false,"name":"prostate disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:10964","UMLS:C0033575","MESH:D011469","DOID:47","NCIT:C26865","ICD9:602.8","SCTID:30281009","ICD9:602.9","EFO:0009602"],"synonyms":[{"name":"disease of prostate gland","type":"exact"},{"name":"disease or disorder of prostate gland","type":"exact"},{"name":"disorder of prostate gland","type":"exact"},{"name":"prostate disease","type":"exact"},{"name":"prostate disorder","type":"exact"},{"name":"prostate gland disease","type":"exact"},{"name":"prostate gland disease or disorder","type":"exact"}],"termid":"MONDO:0003105","terms_by_termid":{"MONDO:0013872":null},"xrefs":{"Monarch":{"xref_id":"0003105"}}}


id: FYPO:0003529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that enters the cell cycle and undergoes two or more rounds of cell division, but then becomes elongated and undergoes cell cycle arrest in interphase of the mitotic cell cycle, and eventually dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, cell cycle arrest in mitotic interphase, elongated cells","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated aseptate cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated cell arrested at interphase","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, cell cycle arrest in mitotic interphase, elongated cells","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, cell cycle arrest in mitotic interphase, elongated cells","type":"exact"}],"termid":"FYPO:0003529"}


id: PBO:0056662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MED28 divergent transcript","termid":"PBO:0056662"}


id: GO:0000221
data:
  {"annotated_genes":["SJAG_04955","SJAG_01397","SJAG_00212","SJAG_04015","SJAG_01447","SJAG_00136","SJAG_01817","SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60649,71568,88377,96940,99237,102984,110177,119026],"is_not":false,"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"The V1 domain of a proton-transporting V-type ATPase found in the vacuolar membrane.","definition_xrefs":["PMID:16449553","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase, V1 domain","termid":"GO:0033180"},{"relation_name":"part_of","term_name":"vacuolar proton-transporting V-type ATPase complex","termid":"GO:0016471"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase, V1 domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar hydrogen ion-transporting ATPase V1 domain","type":"exact"}],"termid":"GO:0000221","terms_by_termid":{"GO:0000221":null}}


id: GO:0071121
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to vascular endothelial growth factor D.","definition_xrefs":["PMID:15590642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha9-beta1 integrin-VEGF-D complex","synonyms":[{"name":"ITGA9-ITGB1-FIGF complex","type":"narrow"}],"termid":"GO:0071121"}


id: GO:0021722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the superior olivary nucleus to attain its fully functional state. The superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["ISBN:0838580343","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"pons maturation","termid":"GO:0021586"},{"relation_name":"part_of","term_name":"superior olivary nucleus development","termid":"GO:0021718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus maturation","synonyms":[{"name":"superior olive maturation","type":"related"}],"termid":"GO:0021722"}


id: PBO:0076148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDS3 homolog, SIN3A corepressor complex component","termid":"PBO:0076148"}


id: PBO:0042789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 164","termid":"PBO:0042789"}


id: GO:1901484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of transcription factor catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:al","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription factor catabolic process (obsolete GO:1901484)","synonyms":[{"name":"down regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"down regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"down regulation of transcription factor breakdown","type":"exact"},{"name":"down regulation of transcription factor catabolic process","type":"exact"},{"name":"down regulation of transcription factor catabolism","type":"exact"},{"name":"down regulation of transcription factor degradation","type":"exact"},{"name":"down-regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"down-regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"down-regulation of transcription factor breakdown","type":"exact"},{"name":"down-regulation of transcription factor catabolic process","type":"exact"},{"name":"down-regulation of transcription factor catabolism","type":"exact"},{"name":"down-regulation of transcription factor degradation","type":"exact"},{"name":"downregulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"downregulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"downregulation of transcription factor breakdown","type":"exact"},{"name":"downregulation of transcription factor catabolic process","type":"exact"},{"name":"downregulation of transcription factor catabolism","type":"exact"},{"name":"downregulation of transcription factor degradation","type":"exact"},{"name":"inhibition of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"inhibition of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"inhibition of transcription factor breakdown","type":"exact"},{"name":"inhibition of transcription factor catabolic process","type":"narrow"},{"name":"inhibition of transcription factor catabolism","type":"exact"},{"name":"inhibition of transcription factor degradation","type":"exact"},{"name":"negative regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"negative regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"negative regulation of transcription factor breakdown","type":"exact"},{"name":"negative regulation of transcription factor catabolism","type":"exact"},{"name":"negative regulation of transcription factor degradation","type":"exact"}],"termid":"GO:1901484"}


id: PR:Q9P774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03160","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.17","secondary_identifiers":["UniProtKB:Q9P774"],"synonyms":[{"name":"Spom972h-DHX38","type":"exact"}],"termid":"PR:Q9P774"}


id: PBO:0068166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 473","termid":"PBO:0068166"}


id: PBO:0045090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal-less homeobox 2","termid":"PBO:0045090"}


id: PBO:0002842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc14 (predicted)","termid":"PBO:0002842"}


id: RO:0002373
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"m has_muscle_insertion s iff m is attaches_to s, and it is the case that when m contracts, s moves. Insertions are usually connections of muscle via tendon to bone.","direct_ancestors":[{"relation_name":"is_a","term_name":"attached_to","termid":"RO:0002371"},{"relation_name":"is_a","term_name":"biomechanically_related_to","termid":"RO:0002567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_muscle_insertion","termid":"RO:0002373"}


id: GO:0035221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the patterns of cell differentiation that will arise in the genital imaginal disc.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"part_of","term_name":"genital disc development","termid":"GO:0035215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genital disc pattern formation","termid":"GO:0035221"}


id: MONDO:1011234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia that occurs in Campbell's desert hamster.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, non-human animal","termid":"MONDO:1010324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia, Campbell's desert hamster","secondary_identifiers":["OMIA:000649-47665"],"termid":"MONDO:1011234","xrefs":{"Monarch":{"xref_id":"1011234"}}}


id: PBO:0050275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 5","termid":"PBO:0050275"}


id: MONDO:0019617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary deficiency","termid":"MONDO:0015127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary deficiency due to empty sella turcica syndrome","secondary_identifiers":["UMLS:C4275064","Orphanet:91354","SCTID:715668008","ICD10CM:E23.0","GARD:19163","icd11.foundation:309067714","MEDGEN:902244"],"synonyms":[{"name":"hypopituitarism due to empty sella turcica syndrome","type":"exact"}],"termid":"MONDO:0019617","xrefs":{"Monarch":{"xref_id":"0019617"}}}


id: MONDO:0009759
data:
  {"annotated_genes":["SJAG_04699","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87132,87133],"is_not":false,"summary":null,"term":"MONDO:0009759"}]},"cv_name":"mondo","definition":"Any mosaic variegated aneuploidy syndrome in which the cause of the disease is a mutation in the BUB1B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_04699":null},"genotype_count":0,"is_obsolete":false,"name":"mosaic variegated aneuploidy syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:338026","NCIT:C128192","DOID:0080141","OMIM:257300","UMLS:C1850343"],"synonyms":[{"name":"BUB1B mosaic variegated aneuploidy syndrome","type":"exact"},{"name":"MOSAIC variegated aneuploidy syndrome 1","type":"related"},{"name":"MVA syndrome","type":"related"},{"name":"MVA1","type":"related"},{"name":"Mosaic variegated aneuploidy syndrome type 1","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome 1","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome caused by mutation in BUB1B","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome type 1","type":"exact"}],"termid":"MONDO:0009759","terms_by_termid":{"MONDO:0009759":null},"xrefs":{"Monarch":{"xref_id":"0009759"}}}


id: GO:0010496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of substances between cells.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"intercellular transport","secondary_identifiers":["GO:1902585"],"synonyms":[{"name":"single organism intercellular transport","type":"related"},{"name":"single-organism intercellular transport","type":"related"}],"termid":"GO:0010496"}


id: FYPO:0004862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form microtubules that are curved, i.e. follow a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0002399","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"curved microtubules","synonyms":[{"name":"curved microtubules during mitotic cell cycle","type":"related"},{"name":"curved microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004862"}


id: FYPO:0002848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T, when the cell population has been in stationary phase and is then placed in conditions that allow recovery.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-shaped vegetative cell","termid":"FYPO:0007379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0005568","FYPO:0000005","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"T-shaped cell during recovery from stationary phase","synonyms":[{"name":"T-shaped cell during recovery from stationary phase during mitotic cell cycle","type":"related"},{"name":"T-shaped cell during vegetative growth following stationary phase","type":"exact"}],"termid":"FYPO:0002848"}


id: MOD:00026
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-threonine.","definition_xrefs":["RESID:AA0017","DeltaMass:0","ChEBI:30013","PubMed:6692818","PubMed:2989287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine residue","synonyms":[{"name":"(2S,3R)-2-amino-3-hydroxybutanoic acid","type":"exact"},{"name":"2-azanyl-3-hydroxybutanoic acid","type":"exact"},{"name":"L-threo-threonine","type":"exact"},{"name":"L-threonine","type":"exact"},{"name":"Thr","type":"exact"},{"name":"alpha-amino-beta-hydroxybutyric acid","type":"exact"},{"name":"beta-methylserine","type":"exact"}],"termid":"MOD:00026"}


id: PBO:0087175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B32; forms dissociable heterodimer with Rpb7p; Rpb4/7 dissociates from RNAPII as Ser2 CTD phosphorylation increases; Rpb4/7 regulates cellular lifespan via mRNA decay process; involved in recruitment of 3'-end processing factors to transcribing RNAPII complex, export of mRNA to cytoplasm under stress conditions; also involved in translation initiation","termid":"PBO:0087175"}


id: GO:0075115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont modulates the frequency, rate or extent of host transmembrane receptor-mediated cAMP signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075115)","synonyms":[{"name":"modulation by symbiont of host transmembrane receptor-mediated cAMP signaling","type":"exact"}],"termid":"GO:0075115"}


id: MONDO:0003241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the brain and spinal cord.","definition_xrefs":["NCIT:C7004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system hemangioma","secondary_identifiers":["DOID:501","UMLS:C1333957","MEDGEN:272703"],"synonyms":[{"name":"central nervous system hemangioma","type":"exact"},{"name":"hemangioma of CNS","type":"exact"},{"name":"hemangioma of central nervous system","type":"exact"},{"name":"hemangioma of the CNS","type":"exact"},{"name":"hemangioma of the central nervous system","type":"exact"}],"termid":"MONDO:0003241","xrefs":{"Monarch":{"xref_id":"0003241"}}}


id: MONDO:0001300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited or acquired peripheral neuropathy affecting the autonomic nervous system. It results in disruption of the involuntary body functions. Inherited causes include Fabry disease and porphyrias. Acquired causes include diabetes, uremia, hepatic disorders, vitamin deficiencies, toxins, and drug toxicities.","definition_xrefs":["NCIT:C27033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"},{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"autonomic neuropathy","secondary_identifiers":["CSP:2042-2001","MEDGEN:82621","DOID:0060054","CSP:2049-9000","DOID:11504","UMLS:C0259749","SCTID:277879009"],"synonyms":[{"name":"autonomic nervous system peripheral neuropathy","type":"exact"},{"name":"autonomic peripheral neuropathy","type":"exact"},{"name":"peripheral neuropathy of autonomic nervous system","type":"exact"}],"termid":"MONDO:0001300","xrefs":{"Monarch":{"xref_id":"0001300"}}}


id: PBO:0046580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 22","termid":"PBO:0046580"}


id: PBO:0015683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eighteen interacting centromere protein Eic1","termid":"PBO:0015683"}


id: MONDO:0018911
data:
  {"annotated_genes":["SJAG_04495","SJAG_03247","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014674"},{"annotations":[85496,85495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007453"}]},"cv_name":"mondo","definition":"MODY (maturity-onset diabetes of the young) is a rare, familial, clinically and genetically heterogeneous form of diabetes characterized by young age of onset (generally 10-45 years of age) with maintenance of endogenous insulin production, lack of pancreatic beta-cell autoimmunity, absence of obesity and insulin resistance and extra-pancreatic manifestations in some subtypes.","definition_xrefs":["Orphanet:552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic diabetes","termid":"MONDO:0015967"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03247":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0004335","MONDO:0005015","MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"maturity-onset diabetes of the young","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0004904","MESH:C562772","DOID:0050524","MEDGEN:87433","SCTID:609561005","NCIT:C114769","UMLS:C0342276","NANDO:2200462","OMIM:606391","GARD:3697"],"synonyms":[{"name":"MODY","type":"exact"},{"name":"Mason type diabetes","type":"related"},{"name":"Mason-type diabetes","type":"exact"},{"name":"maturity onset diabetes of the young","type":"exact"},{"name":"maturity-onset diabetes of the young","type":"exact"},{"name":"maturity-onset diabetes of the young (disease)","type":"exact"}],"termid":"MONDO:0018911","terms_by_termid":{"MONDO:0007453":null,"MONDO:0014674":null},"xrefs":{"Monarch":{"xref_id":"0018911"}}}


id: PR:Q10193
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor srp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.08","synonyms":[{"name":"Spom972h-srp1","type":"exact"}],"termid":"PR:Q10193"}


id: GO:1990538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + a xylan= CoA + an acetylated xylan.","definition_xrefs":["PMID:25141999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"xylan O-acetyltransferase activity","termid":"GO:1990538"}


id: GO:0018132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl serine-peptidyl cysteine cross-link by the condensation of a serine hydroxyl with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["PMID:8895467","RESID:AA0238"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-cysteine oxazolecarboxylic acid (obsolete GO:0018132)","termid":"GO:0018132"}


id: GO:0006701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of progesterone, a steroid hormone produced in the ovary which prepares and maintains the uterus for pregnancy. Also found in plants.","definition_xrefs":["PMID:14613534","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C21-steroid hormone biosynthetic process","termid":"GO:0006700"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"progesterone metabolic process","termid":"GO:0042448"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"progesterone biosynthetic process","synonyms":[{"name":"progesterone anabolism","type":"exact"},{"name":"progesterone biosynthesis","type":"exact"},{"name":"progesterone formation","type":"exact"},{"name":"progesterone synthesis","type":"exact"}],"termid":"GO:0006701"}


id: MONDO:1040056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by variants in the PROM1 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"PROM1-related retinopathy","termid":"MONDO:1040056","xrefs":{"Monarch":{"xref_id":"1040056"}}}


id: PBO:0085052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; has structural resemblance to plant storage and ligand binding proteins (canavalin, glycinin, auxin binding protein) and to some enzymes (epimerase, germin); localizes to the nucleus and cytoplasm","termid":"PBO:0085052"}


id: GO:0090346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organofluorine metabolic process","termid":"GO:0090346"}


id: GO:0050019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinitol + NAD+ = L-xylulose + H+ + NADH.","definition_xrefs":["RHEA:16381","EC:1.1.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-arabinitol 4-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01903","MetaCyc:L-ARABINITOL-4-DEHYDROGENASE-RXN"],"termid":"GO:0050019"}


id: PBO:0005668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell end marker Tea1","termid":"PBO:0005668"}


id: GO:0006502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent or non-covalent attachment of a prenyl group to the carboxy-terminus of a protein; geranyl, farnesyl, or geranylgeranyl groups may be added.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal protein prenylation (obsolete GO:0006502)","synonyms":[{"name":"C-terminal protein prenylation","type":"exact"}],"termid":"GO:0006502"}


id: PR:Q09806
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2G11.04 gene.","definition_xrefs":["UniProtKB:Q09806","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2G11.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.04","synonyms":[{"name":"Spom972h-SPAC2G11.04","type":"exact"}],"termid":"PR:Q09806"}


id: PBO:0061709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 4","termid":"PBO:0061709"}


id: GO:0046877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of saliva from a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"saliva secretion","termid":"GO:0046541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of saliva secretion","termid":"GO:0046877"}


id: GO:2000473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hematopoietic stem cell migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of hematopoietic stem cell migration","termid":"GO:2000471"},{"relation_name":"positively_regulates","term_name":"hematopoietic stem cell migration","termid":"GO:0035701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hematopoietic stem cell migration","synonyms":[{"name":"positive regulation of hemopoietic stem cell migration","type":"exact"}],"termid":"GO:2000473"}


id: PBO:0029877
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_silencing_at_centromere","termid":"PBO:0029877"}


id: PBO:0050584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate 6-O-sulfotransferase 1 pseudogene 1","termid":"PBO:0050584"}


id: PBO:0017869
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi1 Binding Partner","termid":"PBO:0017869"}


id: PBO:0055976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat kinase 2","termid":"PBO:0055976"}


id: PBO:0012537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_maturation_of","termid":"PBO:0012537"}


id: PBO:0062763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily Q member 1 pseudogene","termid":"PBO:0062763"}


id: PBO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp8","termid":"PBO:0002437"}


id: PBO:0039071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute RISC catalytic component 3","termid":"PBO:0039071"}


id: PBO:0089743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2009 family protein, conserved in yeast and apicomplexa","termid":"PBO:0089743"}


id: SO:0001281
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_methylcytidine","secondary_identifiers":["RNAMOD:020"],"synonyms":[{"name":"3-methylcytidine","type":"exact"},{"name":"m3C","type":"exact"},{"name":"three methylcytidine","type":"exact"}],"termid":"SO:0001281"}


id: MONDO:0019463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"plasma cell neoplasm","termid":"MONDO:0004959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"non-amyloid monoclonal immunoglobulin deposition disease","secondary_identifiers":["MEDGEN:1716147","UMLS:C5394673","Orphanet:86861","GARD:19073"],"synonyms":[{"name":"Randall disease","type":"exact"},{"name":"non-amyloid MIDD","type":"exact"}],"termid":"MONDO:0019463","xrefs":{"Monarch":{"xref_id":"0019463"}}}


id: GO:0008511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + K+(out) + Cl-(out) = Na+(in) + K+(in) + Cl-(in).","definition_xrefs":["TC:2.A.30.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium:sodium symporter activity","termid":"GO:0009674"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"},{"relation_name":"is_a","term_name":"potassium:chloride symporter activity","termid":"GO:0015379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sodium:potassium:chloride symporter activity","secondary_identifiers":["RHEA:72395","Reactome:R-HSA-426086","Reactome:R-HSA-5623588"],"synonyms":[{"name":"sodium/potassium/chloride symporter activity","type":"exact"}],"termid":"GO:0008511"}


id: GO:0005212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the lens of an eye.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of eye lens","termid":"GO:0005212"}


id: PR:O60131
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.17 gene.","definition_xrefs":["UniProtKB:O60131","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C16G5.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.17","synonyms":[{"name":"Spom972h-SPBC16G5.17","type":"exact"}],"termid":"PR:O60131"}


id: GO:2000707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dense core granule biogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"regulation of dense core granule biogenesis","termid":"GO:2000705"},{"relation_name":"positively_regulates","term_name":"dense core granule biogenesis","termid":"GO:0061110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of dense core granule biogenesis","termid":"GO:2000707"}


id: PBO:0050052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, S (pseudogene)","termid":"PBO:0050052"}


id: GO:0047799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclopentanone + H+ + NADPH + O2 = 5-valerolactone + H2O + NADP+.","definition_xrefs":["RHEA:15737","EC:1.14.13.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cyclopentanone monooxygenase activity","secondary_identifiers":["MetaCyc:CYCLOPENTANONE-MONOOXYGENASE-RXN","KEGG_REACTION:R02554"],"synonyms":[{"name":"cyclopentanone 1,2-monooxygenase activity","type":"related"},{"name":"cyclopentanone oxygenase activity","type":"related"},{"name":"cyclopentanone,NADPH:oxygen oxidoreductase (5-hydroxylating, lactonizing)","type":"related"}],"termid":"GO:0047799"}


id: MONDO:0007823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete insulin receptors, familial increase 1N (obsolete MONDO:0007823)","secondary_identifiers":["OMIM:147320"],"synonyms":[{"name":"insulin receptors, familial increase IN","type":"related"},{"name":"insulin receptors, familial increase type 1N","type":"exact"}],"termid":"MONDO:0007823","xrefs":{"Monarch":{"xref_id":"0007823"}}}


id: PBO:0056148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mab-21 like 3","termid":"PBO:0056148"}


id: GO:0090063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of microtubule nucleation. Microtubule nucleation is the 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule nucleation","termid":"GO:0010968"},{"relation_name":"is_a","term_name":"positive regulation of microtubule polymerization","termid":"GO:0031116"},{"relation_name":"positively_regulates","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0065003","GO:0007010","GO:0008150","GO:0044085","GO:0000226"],"is_obsolete":false,"name":"positive regulation of microtubule nucleation","termid":"GO:0090063"}


id: MONDO:1012420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brachygnathia, cardiomegaly and renal hypoplasia syndrome, non-human animal","termid":"MONDO:1011961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachygnathia, cardiomegaly and renal hypoplasia syndrome, sheep","secondary_identifiers":["OMIA:001595-9940"],"termid":"MONDO:1012420","xrefs":{"Monarch":{"xref_id":"1012420"}}}


id: PBO:0078628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 77B, pseudogene","termid":"PBO:0078628"}


id: PBO:0054181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1555","termid":"PBO:0054181"}


id: GO:1902210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bacterial-type flagellum assembly.","definition_xrefs":["GOC:jl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"regulation of bacterial-type flagellum assembly","termid":"GO:1902208"},{"relation_name":"positively_regulates","term_name":"bacterial-type flagellum assembly","termid":"GO:0044780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of bacterial-type flagellum assembly","synonyms":[{"name":"activation of bacterial flagellum assembly","type":"narrow"},{"name":"activation of bacterial-type flagellum assembly","type":"narrow"},{"name":"positive regulation of bacterial flagellum assembly","type":"exact"},{"name":"up regulation of bacterial flagellum assembly","type":"exact"},{"name":"up regulation of bacterial-type flagellum assembly","type":"exact"},{"name":"up-regulation of bacterial flagellum assembly","type":"exact"},{"name":"up-regulation of bacterial-type flagellum assembly","type":"exact"},{"name":"upregulation of bacterial flagellum assembly","type":"exact"},{"name":"upregulation of bacterial-type flagellum assembly","type":"exact"}],"termid":"GO:1902210"}


id: PBO:0027683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_Rad54_foci_during_cellular_response_to_doxorubicin","termid":"PBO:0027683"}


id: PBO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase inhibitor associated with endocytosis (predicted)","termid":"PBO:0001317"}


id: FYECO:0000081
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[119565],"is_not":false,"summary":null,"term":"FYECO:0000081"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing yeast extract and other components. The concentration of glucose is very low (eg around 0.1%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"is_obsolete":false,"name":"low glucose YES","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"low glucose YE","type":"related"},{"name":"low glucose rich medium","type":"related"}],"termid":"FYECO:0000081","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000081":null}}


id: MONDO:0009273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any complete hydatidiform mole in which the cause of the disease is a mutation in the NLRP7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complete hydatidiform mole","termid":"MONDO:0016785"},{"relation_name":"is_a","term_name":"gestational trophoblastic neoplasm","termid":"MONDO:0018944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydatidiform mole, recurrent, 1","secondary_identifiers":["UMLS:C3463897","OMIM:231090","GARD:18365","MEDGEN:483038"],"synonyms":[{"name":"HYDM1","type":"related"},{"name":"NLRP7 complete hydatidiform mole","type":"exact"},{"name":"complete hydatidiform mole caused by mutation in NLRP7","type":"exact"},{"name":"gestational trophoblastic disease","type":"related"},{"name":"hydatidiform MOLE, recurrent, 1","type":"related"},{"name":"hydatidiform Mole, complete","type":"related"},{"name":"hydatidiform Mole, recurrent, type 1","type":"exact"},{"name":"hydatidiform mole","type":"related"},{"name":"hydatidiform mole, recurrent, 1","type":"exact"}],"termid":"MONDO:0009273","xrefs":{"Monarch":{"xref_id":"0009273"}}}


id: MOD:01832
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 5x(13)C-labeled residue.","definition_xrefs":["Unimod:772","PubMed:12771378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C-labeled residue","synonyms":[{"name":"13C(5) Silac label","type":"related"},{"name":"Label:13C(5)","type":"related"}],"termid":"MOD:01832"}


id: GO:0036477
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a neuron that includes the cell body (cell soma) and dendrite(s), but excludes the axon.","definition_xrefs":["GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"somatodendritic compartment","termid":"GO:0036477"}


id: PBO:0013444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 family ATP-dependent DNA helicase Fft3","termid":"PBO:0013444"}


id: GO:0098605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-Serine + Selenohomocysteine => L-Selenocystathionine + H2O.","definition_xrefs":["PMID:6456763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"selenocystathionine beta-synthase activity","secondary_identifiers":["Reactome:R-HSA-2408559"],"termid":"GO:0098605"}


id: MONDO:0002426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm that arises from the lung. Representative examples include Kaposi sarcoma, leiomyosarcoma, and synovial sarcoma.","definition_xrefs":["NCIT:C4860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung cancer","termid":"MONDO:0008903"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung sarcoma","secondary_identifiers":["MEDGEN:109336","DOID:2784","UMLS:C0598790"],"synonyms":[{"name":"lung sarcoma","type":"exact"},{"name":"pulmonary sarcoma","type":"exact"},{"name":"sarcoma of lung","type":"exact"},{"name":"sarcoma of the lung","type":"exact"}],"termid":"MONDO:0002426","xrefs":{"Monarch":{"xref_id":"0002426"}}}


id: PBO:0090578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-vacuole tethering sorting nexin Snx12","termid":"PBO:0090578"}


id: GO:0034798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hydrogen (2R,3S)-3-methyloxiran-2-ylphosphonic acid + L-cysteine = hydrogen (1R,2R)-1-L-cysteine-2-hydroxypropylphosphonic acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete fosfomycin 2-L-cysteine ligase activity (obsolete GO:0034798)","termid":"GO:0034798"}


id: PBO:0005053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf4","termid":"PBO:0005053"}


id: GO:0050425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + peptidyl-L-lysine (or L-arginine) = L-lysine (or L-arginine) + peptide. Preferential release of a C-terminal lysine or arginine amino acid.","definition_xrefs":["EC:3.4.17.2","MetaCyc:CARBOXYPEPTIDASE-B-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete carboxypeptidase B activity (obsolete GO:0050425)","synonyms":[{"name":"carboxypeptidase B activity","type":"exact"},{"name":"pancreatic carboxypeptidase B","type":"related"},{"name":"peptidyl-L-lysine [L-arginine]hydrolase activity","type":"related"},{"name":"protaminase activity","type":"related"},{"name":"tissue carboxypeptidase B","type":"related"}],"termid":"GO:0050425"}


id: GO:0035379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of carbon dioxide (CO2) from one side of a membrane to the other.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"carbon dioxide transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-1237042","Reactome:R-HSA-1247645","Reactome:R-HSA-1237069","Reactome:R-HSA-1247649"],"termid":"GO:0035379"}


id: PBO:0029073
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_sumoylation","termid":"PBO:0029073"}


id: PBO:0003172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isopentenyl-diphosphate delta-isomerase Idi1","termid":"PBO:0003172"}


id: GO:1901552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell development.","definition_xrefs":["GOC:pr","GOC:TermGenie","PMID:19470579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of endothelial cell development","termid":"GO:1901550"},{"relation_name":"positively_regulates","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell development","synonyms":[{"name":"activation of endothelial cell development","type":"narrow"},{"name":"up regulation of endothelial cell development","type":"exact"},{"name":"up-regulation of endothelial cell development","type":"exact"},{"name":"upregulation of endothelial cell development","type":"exact"}],"termid":"GO:1901552"}


id: PBO:0084623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine-S-sulfoxide reductase; involved in the response to oxidative stress; protects iron-sulfur clusters from oxidative inactivation along with MXR2; involved in the regulation of lifespan; reduced activity of human homolog implicated in Alzheimer disease","termid":"PBO:0084623"}


id: MONDO:0003836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, hormonally functioning or non-functioning pituitary gland adenocarcinoma that produces thyrotropin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TSH producing pituitary tumor","termid":"MONDO:0003837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant thyroid stimulating hormone producing neoplasm of pituitary gland","secondary_identifiers":["MEDGEN:277341","DOID:6274","UMLS:C1334627","NCIT:C5965"],"synonyms":[{"name":"TSH producing pituitary gland carcinoma","type":"exact"},{"name":"TSH-producing pituitary gland carcinoma","type":"exact"},{"name":"malignant TSH producing neoplasm of pituitary","type":"exact"},{"name":"malignant TSH producing neoplasm of pituitary gland","type":"exact"},{"name":"malignant TSH producing neoplasm of the pituitary","type":"exact"},{"name":"malignant TSH producing neoplasm of the pituitary gland","type":"exact"},{"name":"malignant TSH producing pituitary gland neoplasm","type":"exact"},{"name":"malignant TSH producing pituitary gland tumor","type":"exact"},{"name":"malignant TSH producing pituitary gland tumour","type":"exact"},{"name":"malignant TSH producing pituitary neoplasm","type":"exact"},{"name":"malignant TSH producing pituitary tumor","type":"exact"},{"name":"malignant TSH producing pituitary tumour","type":"exact"},{"name":"malignant TSH producing tumor of pituitary","type":"exact"},{"name":"malignant TSH producing tumor of pituitary gland","type":"exact"},{"name":"malignant TSH producing tumor of the pituitary","type":"exact"},{"name":"malignant TSH producing tumor of the pituitary gland","type":"exact"},{"name":"malignant TSH producing tumour of pituitary","type":"exact"},{"name":"malignant TSH producing tumour of pituitary gland","type":"exact"},{"name":"malignant TSH producing tumour of the pituitary","type":"exact"},{"name":"malignant TSH producing tumour of the pituitary gland","type":"exact"},{"name":"malignant TSH secreting neoplasm of pituitary","type":"exact"},{"name":"malignant TSH secreting neoplasm of pituitary gland","type":"exact"},{"name":"malignant TSH secreting neoplasm of the pituitary","type":"exact"},{"name":"malignant TSH secreting neoplasm of the pituitary gland","type":"exact"},{"name":"malignant TSH secreting pituitary gland neoplasm","type":"exact"},{"name":"malignant TSH secreting pituitary gland tumor","type":"exact"},{"name":"malignant TSH secreting pituitary gland tumour","type":"exact"},{"name":"malignant TSH secreting pituitary neoplasm","type":"exact"},{"name":"malignant TSH secreting pituitary tumor","type":"exact"},{"name":"malignant TSH secreting pituitary tumour","type":"exact"},{"name":"malignant TSH secreting tumor of pituitary","type":"exact"},{"name":"malignant TSH secreting tumor of pituitary gland","type":"exact"},{"name":"malignant TSH secreting tumor of the pituitary","type":"exact"},{"name":"malignant TSH secreting tumor of the pituitary gland","type":"exact"},{"name":"malignant TSH secreting tumour of pituitary","type":"exact"},{"name":"malignant TSH secreting tumour of pituitary gland","type":"exact"},{"name":"malignant TSH secreting tumour of the pituitary","type":"exact"},{"name":"malignant TSH secreting tumour of the pituitary gland","type":"exact"},{"name":"malignant pituitary gland thyrotropinoma","type":"exact"},{"name":"malignant pituitary thyrotropinoma","type":"exact"},{"name":"malignant thyroid stimulating hormone producing neoplasm of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing neoplasm of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone producing neoplasm of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing neoplasm of the pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary gland neoplasm","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary gland tumor","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary gland tumour","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary neoplasm","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary tumor","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary tumour","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumor","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumor of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumor of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumor of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumor of the pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumour","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumour of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumour of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumour of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumour of the pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting neoplasm of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting neoplasm of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting neoplasm of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting neoplasm of the pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary gland neoplasm","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary gland tumor","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary gland tumour","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary neoplasm","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary tumor","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary tumour","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumor of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumor of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumor of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumor of the pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumour of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumour of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumour of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumour of the pituitary gland","type":"exact"},{"name":"malignant thyrotropinoma","type":"exact"},{"name":"malignant thyrotropinoma of pituitary","type":"exact"},{"name":"malignant thyrotropinoma of pituitary gland","type":"exact"},{"name":"malignant thyrotropinoma of the pituitary","type":"exact"},{"name":"malignant thyrotropinoma of the pituitary gland","type":"exact"},{"name":"thyrotropin producing pituitary gland carcinoma","type":"exact"}],"termid":"MONDO:0003836","xrefs":{"Monarch":{"xref_id":"0003836"}}}


id: GO:0035833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of berbamunine, an isoquinoline alkaloid.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzyl isoquinoline alkaloid biosynthetic process","termid":"GO:0009708"},{"relation_name":"is_a","term_name":"berbamunine metabolic process","termid":"GO:0035832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"berbamunine biosynthetic process","synonyms":[{"name":"berbamunine anabolism","type":"exact"},{"name":"berbamunine biosynthesis","type":"exact"},{"name":"berbamunine formation","type":"exact"},{"name":"berbamunine synthesis","type":"exact"}],"termid":"GO:0035833"}


id: PBO:0051250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-5-2 (pseudogene)","termid":"PBO:0051250"}


id: PBO:0086597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression induced under calcium shortage","termid":"PBO:0086597"}


id: PBO:0049473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granzyme H","termid":"PBO:0049473"}


id: PBO:0036277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nebulin-family actin filament anchoring protein Cyk3 (predicted)","termid":"PBO:0036277"}


id: GO:0120105
data:
  {"annotated_genes":["SJAG_04597","SJAG_00268","SJAG_00082","SJAG_03379","SJAG_03703","SJAG_00845","SJAG_03145","SJAG_02392","SJAG_00807","SJAG_02831","SJAG_03564","SJAG_03631","SJAG_01889","SJAG_02278","SJAG_03625","SJAG_03704","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88613,90327,91106,94743,95275,96177,96652,97526,101248,104009,106520,109366,111108,112608,113664,118175,118192],"is_not":false,"summary":null,"term":"GO:0120105"}]},"cv_name":"cellular_component","definition":"The region of the mitotic actomyosin ring in between the proximal layer and the actin filament layer. This region contains the accessory protein network, some actin filaments and connections between the proximal layer and the actin filament layer.","definition_xrefs":["PMID:28914606","GOC:krc","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring","termid":"GO:0110085"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00268":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_01787":null,"SJAG_01889":null,"SJAG_02278":null,"SJAG_02392":null,"SJAG_02831":null,"SJAG_03145":null,"SJAG_03379":null,"SJAG_03564":null,"SJAG_03625":null,"SJAG_03631":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0070938"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005938","GO:0070938","GO:0005575","GO:0015629","GO:0005737"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring, intermediate layer","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actomyosin contractile ring, intermediate layer","type":"exact"}],"termid":"GO:0120105","terms_by_termid":{"GO:0120105":null}}


id: PATO:0000587
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased size","synonyms":[{"name":"hypoplasia","type":"narrow"},{"name":"reduced","type":"related"},{"name":"small","type":"related"},{"name":"tiny","type":"related"},{"name":"underdeveloped","type":"narrow"}],"termid":"PATO:0000587"}


id: PR:Q9C117
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- png3 gene.","definition_xrefs":["UniProtKB:Q9C117","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E8.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.12c","synonyms":[{"name":"Spom972h-png3","type":"exact"}],"termid":"PR:Q9C117"}


id: PATO:0002141
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A density quality which lacks pattern.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mass density","termid":"PATO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregular density","termid":"PATO:0002141"}


id: PBO:0047182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 200 member C","termid":"PBO:0047182"}


id: FYPO:0006169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to 4-nitroquinoline N-oxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to 4-nitroquinoline N-oxide","synonyms":[{"name":"normal protein phosphorylation during cellular response to 4-NQO","type":"exact"},{"name":"normal protein phosphorylation during cellular response to 4-nitroquinoline N-oxide during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to 4-nitroquinoline N-oxide during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during cellular response to 4NQO","type":"exact"}],"termid":"FYPO:0006169"}


id: MONDO:0012058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"myocardial infarction","termid":"MONDO:0005068"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocardial infarction, susceptibility to, 2","secondary_identifiers":["OMIM:608557","UMLS:C1837871","MEDGEN:325275"],"synonyms":[{"name":"Mci2","type":"related"},{"name":"myocardial infarction, susceptibility to, 2","type":"exact"},{"name":"myocardial infarction, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0012058","xrefs":{"Monarch":{"xref_id":"0012058"}}}


id: GO:0039561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of host IRF9 (interferon regulatory factor-9) by promoting the nuclear accumulation of IRF9. For example, the reovirus mu2 protein promotes nuclear accumulation of host IRF9 by an as yet unconfirmed-mechanism.","definition_xrefs":["PMID:19109390"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF9 activity by positive regulation of IRF9 localization to nucleus (obsolete GO:0039561)","synonyms":[{"name":"suppression by virus of host IRF9 activity by nuclear localization of IRF9","type":"related"},{"name":"suppression of interferon signaling by nuclear accumulation of IRF9","type":"related"}],"termid":"GO:0039561"}


id: _global:negatively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of negatively regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"_global:regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulated_by","secondary_identifiers":["RO:0002335"],"termid":"_global:negatively_regulated_by"}


id: PBO:0027913
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_ionizing_radiation","termid":"PBO:0027913"}


id: PBO:0038873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase complexing protein 1","termid":"PBO:0038873"}


id: PBO:0079523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane immune signaling adaptor TYROBP","termid":"PBO:0079523"}


id: PBO:0054324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1717","termid":"PBO:0054324"}


id: PR:Q96VG2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ost4 gene.","definition_xrefs":["UniProtKB:Q96VG2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase 4 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.15c","synonyms":[{"name":"OTase 4 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ost4","type":"exact"},{"name":"oligosaccharyl transferase 4 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96VG2"}


id: PBO:0080541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 1 like","termid":"PBO:0080541"}


id: PBO:0045758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin converting enzyme like 1 pseudogene 2","termid":"PBO:0045758"}


id: GO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a natural killer cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte differentiation","termid":"GO:0030098"},{"relation_name":"is_a","term_name":"natural killer cell activation","termid":"GO:0030101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell differentiation","synonyms":[{"name":"NK cell differentiation","type":"exact"},{"name":"natural killer cell development","type":"related"}],"termid":"GO:0001779"}


id: PBO:0081746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 676","termid":"PBO:0081746"}


id: PBO:0076306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 2 pseudogene 2","termid":"PBO:0076306"}


id: PBO:0045856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 46","termid":"PBO:0045856"}


id: PBO:0065397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 2 pseudogene 3","termid":"PBO:0065397"}


id: PBO:0031766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_antimycin_A","termid":"PBO:0031766"}


id: GO:0036372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an opsin (a G protein-coupled receptor of photoreceptor cells) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:atm","PMID:20238016","PMID:22855808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"opsin transport","synonyms":[{"name":"ciliary transport of opsin","type":"narrow"}],"termid":"GO:0036372"}


id: FYPO:0000723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to alkaline pH. Cells stop growing (and may die) at a pH that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to alkalinity","synonyms":[{"name":"alkaline pH resistance: decreased","type":"related"},{"name":"decreased growth during cellular response to alkalinity","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to alkalinity","type":"exact"},{"name":"hypersensitive to alkalinity","type":"exact"},{"name":"sensitive to alkalinity during mitotic cell cycle","type":"related"},{"name":"sensitive to alkalinity during vegetative growth","type":"exact"}],"termid":"FYPO:0000723"}


id: PR:O13733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-terminal kinase-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12984:SF3","OMA:SCHPO01548","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain-containing protein ppk3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.13","secondary_identifiers":["UniProtKB:O13733"],"synonyms":[{"name":"Spom972h-SCYL1","type":"exact"}],"termid":"PR:O13733"}


id: GO:1901387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of voltage-gated calcium channel activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transporter activity","termid":"GO:1901021"},{"relation_name":"is_a","term_name":"regulation of voltage-gated calcium channel activity","termid":"GO:1901385"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of voltage-gated calcium channel activity","synonyms":[{"name":"activation of depolarization-activated calcium channel","type":"broad"},{"name":"activation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"activation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"activation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"activation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"activation of voltage gated calcium channel activity","type":"exact"},{"name":"activation of voltage-dependent calcium channel activity","type":"exact"},{"name":"activation of voltage-gated calcium channel activity","type":"narrow"},{"name":"activation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"activation of voltage-sensitive calcium channel","type":"exact"},{"name":"positive regulation of depolarization-activated calcium channel","type":"broad"},{"name":"positive regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"positive regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"positive regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"positive regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"positive regulation of voltage gated calcium channel activity","type":"exact"},{"name":"positive regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"positive regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"positive regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"up regulation of depolarization-activated calcium channel","type":"broad"},{"name":"up regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"up regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"up regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"up regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"up regulation of voltage gated calcium channel activity","type":"exact"},{"name":"up regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"up regulation of voltage-gated calcium channel activity","type":"exact"},{"name":"up regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"up regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"up-regulation of depolarization-activated calcium channel","type":"broad"},{"name":"up-regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"up-regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"up-regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"up-regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"up-regulation of voltage gated calcium channel activity","type":"exact"},{"name":"up-regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated calcium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"up-regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"upregulation of depolarization-activated calcium channel","type":"broad"},{"name":"upregulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"upregulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"upregulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"upregulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"upregulation of voltage gated calcium channel activity","type":"exact"},{"name":"upregulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"upregulation of voltage-gated calcium channel activity","type":"exact"},{"name":"upregulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"upregulation of voltage-sensitive calcium channel","type":"exact"}],"termid":"GO:1901387"}


id: GO:0035454
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid inner membrane consisting of gene products and protein complexes that are loosely bound to its stromal surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:bf","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of lumenal side of plastid thylakoid membrane","termid":"GO:0035450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of stromal side of plastid inner membrane","synonyms":[{"name":"extrinsic to stromal leaflet of plastid inner membrane","type":"exact"},{"name":"extrinsic to stromal side of plastid inner membrane","type":"narrow"},{"name":"peripheral to stromal side of plastid inner membrane","type":"exact"}],"termid":"GO:0035454"}


id: GO:0072048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate into the anatomical structures of the renal system.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system pattern specification","synonyms":[{"name":"renal system pattern formation","type":"related"}],"termid":"GO:0072048"}


id: GO:0030210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heparin proteoglycans, which consist of a core protein linked to a heparin glycosaminoglycan. The heparin chain is composed of the repeating disaccharide unit beta-(1,4)-N-acetyl-D-glucosamine-alpha-(1,4)-hexuronic acid, the former being either sulfated or deacetylated on its amino group as well as sulfated on one of its hydroxyl groups, and the latter being a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids. Heparin is similar to heparan sulfate but it contains more N-sulfate and O-sulfate groups. Heparin chains are covalently linked to serine/threonine residues (O-linked) of the core protein via a tetrasaccharide linker sequence (xylose-galactose-galactose-glucuronate).","definition_xrefs":["PMID:22566225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan biosynthetic process","termid":"GO:0030166"},{"relation_name":"is_a","term_name":"heparin proteoglycan metabolic process","termid":"GO:0030202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heparin proteoglycan biosynthetic process","synonyms":[{"name":"heparan sulfate biosynthetic process","type":"related"},{"name":"heparin anabolism","type":"exact"},{"name":"heparin biosynthesis","type":"exact"},{"name":"heparin formation","type":"exact"},{"name":"heparin synthesis","type":"exact"}],"termid":"GO:0030210"}


id: FYPO:0004890
data:
  {"alleles_by_uniquename":{"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119695,119696,119697,119699],"is_not":false,"summary":null,"term":"FYPO:0004890"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is greater than normal during mitosis.","definition_xrefs":["PMID:19948484","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01834":null,"SJAG_03449":null},"genotype_count":4,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"pom152delta":{"display_name":"pom152delta","display_uniquename":"pom152delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01834:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased telomere-nuclear envelope distance during mitosis","references_by_uniquename":{"PMID:24184107":null},"single_locus_annotated_genes":["SJAG_03449","SJAG_01834"],"single_locus_genotype_uniquenames":["man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","pom152delta","man1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased distance between telomeres and nuclear envelope during mitosis","type":"exact"},{"name":"increased telomere-nuclear envelope distance during mitosis during vegetative growth","type":"exact"},{"name":"increased telomere-nuclear envelope distance during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004890","terms_by_termid":{"FYPO:0004890":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0008739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agenesis of cerebral white matter","secondary_identifiers":["OMIM:202600","MEDGEN:347986","UMLS:C1859969"],"synonyms":[{"name":"agenesis of cerebral white matter","type":"exact"}],"termid":"MONDO:0008739","xrefs":{"Monarch":{"xref_id":"0008739"}}}


id: MONDO:0007778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A condition in which there is an abnormally increased distance between two organs or bodily parts; most often, this term is referring to an increased distance between the orbits (orbital hypertelorism).","definition_xrefs":["NCIT:C34715"],"gene_count":0,"genotype_count":0,"name":"obsolete hypertelorism (obsolete MONDO:0007778)","secondary_identifiers":["HP:0000316","MESH:D006972","ICD9:376.41","SCTID:22006008","OMIM:145400"],"synonyms":[{"name":"hypertelorism","type":"exact"},{"name":"hypertelorism of orbit","type":"exact"},{"name":"obsolete hypertelorism (disease)","type":"exact"}],"termid":"MONDO:0007778","xrefs":{"Monarch":{"xref_id":"0007778"}}}


id: MONDO:0004153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal carcinoma that arises from the central nervous system and occurs during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood central nervous system germ cell tumor","termid":"MONDO:0003750"},{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"},{"relation_name":"is_a","term_name":"embryonal carcinoma of the central nervous system","termid":"MONDO:0018843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood central nervous system embryonal carcinoma","secondary_identifiers":["MEDGEN:277988","UMLS:C1377605","NCIT:C6208","DOID:7231"],"synonyms":[{"name":"childhood CNS embryonal cell carcinoma","type":"exact"},{"name":"childhood central nervous system embryonal carcinoma","type":"exact"},{"name":"childhood embryonal carcinoma of the central nervous system","type":"exact"},{"name":"embryonal carcinoma of childhood CNS","type":"exact"},{"name":"embryonal carcinoma of childhood central nervous system","type":"exact"},{"name":"embryonal carcinoma of paediatric CNS","type":"exact"},{"name":"embryonal carcinoma of paediatric central nervous system","type":"exact"},{"name":"embryonal carcinoma of pediatric CNS","type":"exact"},{"name":"embryonal carcinoma of pediatric central nervous system","type":"exact"},{"name":"embryonal carcinoma of the central nervous system of childhood","type":"exact"},{"name":"embryonal carcinoma of the childhood CNS","type":"exact"},{"name":"embryonal carcinoma of the childhood central nervous system","type":"exact"},{"name":"embryonal carcinoma of the paediatric CNS","type":"exact"},{"name":"embryonal carcinoma of the paediatric central nervous system","type":"exact"},{"name":"embryonal carcinoma of the pediatric CNS","type":"exact"},{"name":"embryonal carcinoma of the pediatric central nervous system","type":"exact"},{"name":"paediatric CNS embryonal cell carcinoma","type":"related"},{"name":"paediatric central nervous system embryonal carcinoma","type":"exact"},{"name":"paediatric embryonal carcinoma of the central nervous system","type":"exact"},{"name":"pediatric CNS embryonal cell carcinoma","type":"related"},{"name":"pediatric central nervous system embryonal carcinoma","type":"exact"},{"name":"pediatric embryonal carcinoma of the central nervous system","type":"exact"}],"termid":"MONDO:0004153","xrefs":{"Monarch":{"xref_id":"0004153"}}}


id: MONDO:0012950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial berry aneurysm","termid":"MONDO:0016483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysm, intracranial berry, 10","secondary_identifiers":["OMIM:612587","MESH:C567237","GARD:18328","MEDGEN:390811","UMLS:C2675484","DOID:0080973"],"synonyms":[{"name":"ANIB10","type":"exact"},{"name":"aneurysm, intracranial BERRY, 10","type":"related"}],"termid":"MONDO:0012950","xrefs":{"Monarch":{"xref_id":"0012950"}}}


id: GO:0071404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low-density lipoprotein particle stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipoprotein particle","termid":"GO:0055094"},{"relation_name":"is_a","term_name":"cellular response to lipoprotein particle stimulus","termid":"GO:0071402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to low-density lipoprotein particle stimulus","secondary_identifiers":["GO:0055098"],"synonyms":[{"name":"response to low density lipoprotein particle","type":"broad"},{"name":"response to low-density lipoprotein particle","type":"broad"},{"name":"response to low-density lipoprotein particle stimulus","type":"broad"}],"termid":"GO:0071404"}


id: GO:0046157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme catabolic process","termid":"GO:0042167"},{"relation_name":"is_a","term_name":"siroheme metabolic process","termid":"GO:0046156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"siroheme catabolic process","synonyms":[{"name":"sirohaem catabolic process","type":"exact"},{"name":"sirohaem catabolism","type":"exact"},{"name":"siroheme breakdown","type":"exact"},{"name":"siroheme catabolism","type":"exact"},{"name":"siroheme degradation","type":"exact"}],"termid":"GO:0046157"}


id: GO:0097006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of internal levels of plasma lipoprotein particles within an organism.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plasma lipoprotein particle levels","synonyms":[{"name":"plasma lipoprotein particle homeostasis","type":"narrow"}],"termid":"GO:0097006"}


id: PBO:0087301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Site-specific endonuclease; required for gene conversion at the MAT locus (homothallic switching) through the generation of a ds DNA break; expression restricted to mother cells in late G1 as controlled by Swi4p-Swi6p, Swi5p, and Ash1p","termid":"PBO:0087301"}


id: MONDO:0012389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 12, autosomal dominant","secondary_identifiers":["UMLS:C1864940","MESH:C566489","MEDGEN:355332","OMIM:609995"],"synonyms":[{"name":"MYP12","type":"exact"},{"name":"myopia 12","type":"exact"},{"name":"myopia 12, autosomal dominant","type":"exact"}],"termid":"MONDO:0012389","xrefs":{"Monarch":{"xref_id":"0012389"}}}


id: PBO:0001628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf3 (predicted)","termid":"PBO:0001628"}


id: MONDO:0015976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyper-IgM syndrome without susceptibility to opportunistic infections (obsolete MONDO:0015976)","secondary_identifiers":["Orphanet:183666"],"synonyms":[{"name":"HIGM without susceptibility to opportunistic infections","type":"exact"}],"termid":"MONDO:0015976","xrefs":{"Monarch":{"xref_id":"0015976"}}}


id: GO:0018138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl serine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0242"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-serine thiazolecarboxylic acid (obsolete GO:0018138)","termid":"GO:0018138"}


id: PBO:0055081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2499","termid":"PBO:0055081"}


id: GO:0052174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host macromolecule (obsolete GO:0052174)","termid":"GO:0052174"}


id: PBO:0046824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 3","termid":"PBO:0046824"}


id: FYPO:0007351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) at a cis-acting homologous chromosome pairing region on chromosome 3.","definition_xrefs":["PomBase:vw","PMID:31811152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 3","synonyms":[{"name":"decreased homologous chromosome pairing at RNA584 locus","type":"narrow"},{"name":"decreased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"},{"name":"decreased synapsis at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"},{"name":"reduced homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"}],"termid":"FYPO:0007351"}


id: GO:0045206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of MAPK phosphatase into, out of or within a cell, or between cells.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ebc"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK phosphatase transporter activity (obsolete GO:0045206)","synonyms":[{"name":"MAPK phosphatase transporter activity","type":"exact"},{"name":"MKP shuttle","type":"narrow"},{"name":"leptomycin B-sensitive MAPK phosphatase transporter activity","type":"narrow"},{"name":"leptomycin B-sensitive MKP shuttle","type":"narrow"}],"termid":"GO:0045206"}


id: PBO:0013780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type Mca1 (predicted)","termid":"PBO:0013780"}


id: PBO:0054094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1447","termid":"PBO:0054094"}


id: MONDO:0019879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 4q is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the long arm of chromosome 4, with highly variable phenotype typically characterized by psychomotor delay, intellectual disability, craniofacial dysmorphism (microcephaly, low-set, prominent ears, downslanting palpebral fissures, hypertelorism, epicanthic folds, broad, prominent nasal bridge, high arched and cleft palate, micro-/retrognathia), seizures, as well as tooth and digital anomalies (clinodactyly, polydactyly). Cardiac malformations, renal anomalies, cryptorchidism, hypotonia and hearing impairment have also been reported.","definition_xrefs":["Orphanet:96096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 4","termid":"MONDO:0016955"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 4q","secondary_identifiers":["MEDGEN:1633392","SCTID:763273008","UMLS:C4706362","GARD:19312"],"synonyms":[{"name":"distal duplication 4q","type":"exact"},{"name":"distal trisomy type 4q","type":"exact"},{"name":"telomeric duplication 4q","type":"exact"},{"name":"trisomy 4qter","type":"exact"}],"termid":"MONDO:0019879","xrefs":{"Monarch":{"xref_id":"0019879"}}}


id: PBO:0061508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRXN2 antisense RNA 1","termid":"PBO:0061508"}


id: MONDO:0006378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant mesothelioma that arises from the pleura and is characterized by the presence of cells with epithelioid morphology. The epithelioid cells usually have eosinophilic cytoplasm, bland nuclei, and form tubulopapillary, microglandular, or sheet-like patterns.","definition_xrefs":["NCIT:C45662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant pleural mesothelioma","termid":"MONDO:0005112"},{"relation_name":"is_a","term_name":"malignant epithelioid mesothelioma","termid":"MONDO:0005599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleural epithelioid mesothelioma","secondary_identifiers":["MEDGEN:318031","UMLS:C1709574","EFO:1000484"],"synonyms":[{"name":"malignant epithelioid mesothelioma of pleura","type":"exact"},{"name":"pleura malignant epithelioid mesothelioma","type":"exact"},{"name":"pleural epithelioid mesothelioma","type":"exact"}],"termid":"MONDO:0006378","xrefs":{"Monarch":{"xref_id":"0006378"}}}


id: PBO:0068682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 63, pseudogene","termid":"PBO:0068682"}


id: PR:Q9P4X1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdi4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P4X1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein C959.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.05c","synonyms":[{"name":"Spom972h-pdi4","type":"exact"},{"name":"protein disulfide isomerase C959.05c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P4X1"}


id: MONDO:0021345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that involves the pharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"},{"relation_name":"is_a","term_name":"pharynx neoplasm","termid":"MONDO:0021246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma of pharynx","secondary_identifiers":["UMLS:C3164746","NCIT:C9466","SCTID:449254004","MEDGEN:757152"],"synonyms":[{"name":"cancer of the pharynx","type":"exact"},{"name":"carcinoma of pharynx","type":"exact"},{"name":"carcinoma of the pharynx","type":"exact"},{"name":"pharyngeal carcinoma","type":"exact"},{"name":"pharyngeal throat cancer","type":"exact"},{"name":"pharynx carcinoma","type":"exact"}],"termid":"MONDO:0021345","xrefs":{"Monarch":{"xref_id":"0021345"}}}


id: GO:0009379
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A DNA helicase complex found at Holliday junctions where the helicase activity is involved in the migration of the junction branch point. The best-characterized example is the E. coli RuvAB complex, in which a hexamer of RuvB subunits possesses helicase activity that is modulated by association with RuvA.","definition_xrefs":["PMID:16935884","PMID:9442895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Holliday junction helicase complex","termid":"GO:0009379"}


id: GO:0001315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh","PMID:12044938"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to reactive oxygen species (obsolete GO:0001315)","synonyms":[{"name":"age-dependent response to AOS","type":"exact"},{"name":"age-dependent response to ROI","type":"exact"},{"name":"age-dependent response to ROS","type":"exact"},{"name":"age-dependent response to active oxygen species","type":"exact"},{"name":"age-dependent response to reactive oxidative species","type":"exact"},{"name":"age-dependent response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:0001315"}


id: PBO:0017922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CorA family magnesium ion transmembrane transporter (predicted)","termid":"PBO:0017922"}


id: PBO:0004462
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Accumulation of Condensin at RDNA","termid":"PBO:0004462"}


id: MONDO:0004615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a gingiva of upper jaw.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingival cancer","termid":"MONDO:0005507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"upper gum cancer","secondary_identifiers":["MEDGEN:509265","DOID:8601","ICD9:143.0","SCTID:363383000","UMLS:C0153365"],"synonyms":[{"name":"cancer of gingiva of upper jaw","type":"exact"},{"name":"gingiva of upper jaw cancer","type":"exact"},{"name":"malignant gingiva of upper jaw neoplasm","type":"exact"},{"name":"malignant neoplasm of gingiva of upper jaw","type":"exact"},{"name":"malignant tumor of upper gingiva","type":"exact"},{"name":"malignant tumor of upper gum","type":"exact"},{"name":"malignant tumour of upper gingiva","type":"exact"},{"name":"malignant tumour of upper gum","type":"exact"}],"termid":"MONDO:0004615","xrefs":{"Monarch":{"xref_id":"0004615"}}}


id: GO:0015571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of N-acetylgalactosamine from one side of a membrane to the other. N-acetylgalactosamine, 2-acetamido-2-deoxygalactopyranose, is the n-acetyl derivative of galactosamine.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosamine transmembrane transporter activity","termid":"GO:0019196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"N-acetylgalactosamine transmembrane transporter activity","secondary_identifiers":["GO:0015590"],"synonyms":[{"name":"N-acetylgalactosamine permease activity","type":"exact"}],"termid":"GO:0015571"}


id: PATO:0001138
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001138 ig m concentration (obsolete PATO:0001138)","termid":"PATO:0001138"}


id: PBO:0055603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3041","termid":"PBO:0055603"}


id: PBO:0068018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 323","termid":"PBO:0068018"}


id: PBO:0069478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 745, pseudogene","termid":"PBO:0069478"}


id: MONDO:0012166
data:
  {"annotated_genes":["SJAG_01854"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86544],"is_not":false,"summary":null,"term":"MONDO:0012166"}]},"cv_name":"mondo","definition":"Any hereditary ataxia in which the cause of the disease is a mutation in the RNF170 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary ataxia","termid":"MONDO:0100309"},{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"},{"relation_name":"is_a","term_name":"sensory ataxia","termid":"MONDO:0100311"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01854":null},"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant sensory ataxia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111170","OMIM:608984","MEDGEN:332346","UMLS:C1837015"],"synonyms":[{"name":"ADSA","type":"exact"},{"name":"Adsa","type":"related"},{"name":"RNF170 hereditary ataxia","type":"exact"},{"name":"SNAX1","type":"exact"},{"name":"ataxia, sensory, 1, autosomal dominant","type":"related"},{"name":"hereditary ataxia caused by mutation in RNF170","type":"exact"}],"termid":"MONDO:0012166","terms_by_termid":{"MONDO:0012166":null},"xrefs":{"Monarch":{"xref_id":"0012166"}}}


id: GO:1990121
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimer of H-NS proteins that is involved in bacterial nucleoid condensation and negative regulation of global gene expression by directly binding to promoter regions. Recognizes both structural and sequence-specific motifs in double-stranded DNA and has binding preference for bent DNA.","definition_xrefs":["GOC:bhm","PMID:12592399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA bending complex","termid":"GO:1990104"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"},{"relation_name":"part_of","term_name":"bacterial nucleoid","termid":"GO:0043590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005829","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"H-NS complex","synonyms":[{"name":"DNA-binding protein H-NS complex","type":"exact"},{"name":"histone-like protein H-NS complex","type":"exact"}],"termid":"GO:1990121"}


id: MONDO:0008997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Cockayne syndrome A (obsolete MONDO:0008997)","termid":"MONDO:0008997","xrefs":{"Monarch":{"xref_id":"0008997"}}}


id: MONDO:1011423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complement component 6 deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 6 deficiency, non-human animal","secondary_identifiers":["OMIA:001624"],"synonyms":[{"name":"C6 deficiency","type":"exact"}],"termid":"MONDO:1011423","xrefs":{"Monarch":{"xref_id":"1011423"}}}


id: PBO:0000420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp4 family (predicted)","termid":"PBO:0000420"}


id: GO:1990846
data:
  {"annotated_genes":["SJAG_01348","SJAG_02874"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95825,97411],"is_not":false,"summary":null,"term":"GO:1990846"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of ribonucleoside-diphosphate reductase.","definition_xrefs":["PMID:16317005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"negatively_regulates","term_name":"ribonucleoside-diphosphate reductase activity","termid":"GO:0061731"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01348":null,"SJAG_02874":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"negatively_regulates","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0004857","GO:0003824","GO:0140678","GO:0003674","GO:0016491","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990846","terms_by_termid":{"GO:1990846":null}}


id: PBO:0002750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Niemann-Pick disease type C2 protein hE1 homolog (predicted)","termid":"PBO:0002750"}


id: PBO:0017568
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Walker-Warburg syndrome","termid":"PBO:0017568"}


id: PBO:0074211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC41A3 antisense RNA 1","termid":"PBO:0074211"}


id: PBO:0017658
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly","termid":"PBO:0017658"}


id: GO:0002819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an adaptive immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adaptive immune response","termid":"GO:0002819"}


id: PBO:0047512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FER tyrosine kinase pseudogene 1","termid":"PBO:0047512"}


id: MONDO:0957262
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86913],"is_not":false,"summary":null,"term":"MONDO:0957262"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive osteopetrosis","termid":"MONDO:0019026"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"osteopetrosis, autosomal recessive 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620366","UMLS:C5830487","MEDGEN:1841123"],"termid":"MONDO:0957262","terms_by_termid":{"MONDO:0957262":null},"xrefs":{"Monarch":{"xref_id":"0957262"}}}


id: PBO:0055758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA p53 regulated and ESC associated 2","termid":"PBO:0055758"}


id: GO:0046102
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"inosine metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"inosine metabolism","type":"exact"}],"termid":"GO:0046102","terms_by_termid":{"GO:0006190":null}}


id: GO:0004915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-6 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-6 receptor activity","synonyms":[{"name":"IL-6 receptor activity","type":"exact"},{"name":"IL-6R","type":"exact"},{"name":"gp130","type":"related"}],"termid":"GO:0004915"}


id: GO:0007093
data:
  {"annotated_genes":["SJAG_01297","SJAG_02392","SJAG_05373","SJAG_00082","SJAG_03681","SJAG_00071","SJAG_02563","SJAG_04280","SJAG_03126","SJAG_03720","SJAG_01084","SJAG_01205","SJAG_01330","SJAG_01837","SJAG_00640","SJAG_03529","SJAG_01679","SJAG_03073","SJAG_02098","SJAG_01076","SJAG_02576","SJAG_00486","SJAG_00883","SJAG_03695","SJAG_04332","SJAG_04259","SJAG_03898","SJAG_01210","SJAG_01146","SJAG_00623","SJAG_03353","SJAG_01401","SJAG_04126","SJAG_01855","SJAG_00364","SJAG_01873","SJAG_03942","SJAG_01044","SJAG_01708","SJAG_04140","SJAG_03160","SJAG_04884","SJAG_03048","SJAG_02336","SJAG_04999","SJAG_03026","SJAG_02266","SJAG_01082","SJAG_01605","SJAG_02771","SJAG_02169","SJAG_04597","SJAG_04671","SJAG_04287","SJAG_00169","SJAG_02074","SJAG_01680","SJAG_00429","SJAG_01010","SJAG_03927","SJAG_00327","SJAG_01677","SJAG_03602","SJAG_01429","SJAG_02451","SJAG_02026","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114574,108563,116202,99912,104208,114086,91063,112268,107544],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[94746,101754,100858,116306,90337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[111506,78351,93909,80354,116534,116307,114772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[99681,100859,75104,112343,117404,91771,94303,106933,99514,72793,109624,117103,79166,117576,116362,71471,79825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[109199,102673,116204,89285,101936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[91648,109977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[96183,116308,98752,94878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[92134,75598,109625,89462,112038,117318,91772,99683,106934,118013,100860,79767,90552,101369,72791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[89463,79164,96344,106935,89508,94879,102674,99684,79540,91773,79772,74778,116364,112039,112344,101179,74254,107975,90787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"},{"annotations":[110213,106636,99756,114804,102113,115859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[94538],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[116976],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"A signaling process that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"is_a","term_name":"mitotic cell cycle 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cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072456","GO:0031575","GO:0072474","GO:0071780","GO:0072413"],"synonyms":[{"name":"mitotic cell cycle checkpoint","type":"exact"},{"name":"mitotic checkpoint","type":"related"},{"name":"signal transduction involved in mitotic G2/M transition checkpoint","type":"narrow"},{"name":"signal transduction involved in mitotic cell cycle G1/S checkpoint","type":"narrow"},{"name":"signal transduction involved in mitotic cell cycle checkpoint","type":"exact"}],"termid":"GO:0007093","terms_by_termid":{"GO:0007094":null,"GO:0007095":null,"GO:0031568":null,"GO:0031569":null,"GO:0031571":null,"GO:0031573":null,"GO:0033314":null,"GO:0044773":null,"GO:0044878":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: MONDO:0016401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete energy metabolism disorder with epilepsy (obsolete MONDO:0016401)","secondary_identifiers":["Orphanet:225696"],"termid":"MONDO:0016401","xrefs":{"Monarch":{"xref_id":"0016401"}}}


id: GO:0000193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAP kinase activity in the context of regulating pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK (pseudohyphal growth) (obsolete GO:0000193)","synonyms":[{"name":"activation of MAPK (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000193"}


id: MONDO:1011054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, non-human animal","termid":"MONDO:1010262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, domestic cat","secondary_identifiers":["OMIA:000807-9685"],"termid":"MONDO:1011054","xrefs":{"Monarch":{"xref_id":"1011054"}}}


id: PATO:0001083
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001083 acceleration value (obsolete PATO:0001083)","termid":"PATO:0001083"}


id: PBO:0046288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 5","termid":"PBO:0046288"}


id: MONDO:0013316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Occult macular dystrophy is a rare, genetic retinal dystrophy disease characterized by bilateral progressive decline of visual acuity, due to retinal dysfunction confined only to the macula, associated with normal fundus and fluorescein angiograms and severely attenuated focal macular and multifocal electroretinograms.","definition_xrefs":["Orphanet:247834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macular degeneration","termid":"MONDO:0003004"},{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"occult macular dystrophy","secondary_identifiers":["UMLS:C3150833","DOID:0050578","NANDO:1200934","GARD:17200","ICD10CM:H35.5","OMIM:613587","icd11.foundation:863463706","MEDGEN:462183"],"synonyms":[{"name":"OCMD","type":"exact"},{"name":"OMD","type":"exact"},{"name":"Omd","type":"related"},{"name":"occult macular dystrophy","type":"exact"}],"termid":"MONDO:0013316","xrefs":{"Monarch":{"xref_id":"0013316"}}}


id: PBO:0045389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase like 10","termid":"PBO:0045389"}


id: PBO:0067648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 823, pseudogene","termid":"PBO:0067648"}


id: PBO:0051836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunity related GTPase cinema","termid":"PBO:0051836"}


id: GO:0004941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of beta2-adrenergic receptors.","definition_xrefs":["GOC:mah","IUPHAR_GPCR:1274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-adrenergic receptor activity","termid":"GO:0004939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"beta2-adrenergic receptor activity","synonyms":[{"name":"beta2 adrenoceptor","type":"exact"}],"termid":"GO:0004941"}


id: MONDO:0012858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570","MONDO:0005244"],"is_obsolete":false,"name":"primary CD59 deficiency","secondary_identifiers":["OMIM:612300","Orphanet:169464","UMLS:C2676767","MEDGEN:393582","MESH:C567355","GARD:17054","NANDO:2200804"],"synonyms":[{"name":"CD59 deficiency","type":"related"},{"name":"HACD59","type":"related"},{"name":"hemolytic anemia, CD59-mediated, with or without immune-mediated polyneuropathy","type":"related"},{"name":"primary CD59 deficiency","type":"exact"}],"termid":"MONDO:0012858","xrefs":{"Monarch":{"xref_id":"0012858"}}}


id: PBO:0060449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear assembly factor 1 ribonucleoprotein","termid":"PBO:0060449"}


id: PBO:0086759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; questionable ORF from MIPS","termid":"PBO:0086759"}


id: PBO:0042210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin J pseudogene 1","termid":"PBO:0042210"}


id: GO:0039662
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid bilayer that forms the outermost layer of the cell envelope, occurring in a host cell.","definition_xrefs":["GOC:bf","GOC:ch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host outer membrane","termid":"GO:0044384"},{"relation_name":"part_of","term_name":"host cell envelope","termid":"GO:0044230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell outer membrane","synonyms":[{"name":"host cell envelope outer membrane","type":"exact"},{"name":"outer membrane of host cell","type":"exact"}],"termid":"GO:0039662"}


id: PBO:0063232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 18","termid":"PBO:0063232"}


id: MONDO:0024421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature contractures hypotonia","synonyms":[{"name":"Hennekam Koss de Geest syndrome","type":"related"}],"termid":"MONDO:0024421","xrefs":{"Monarch":{"xref_id":"0024421"}}}


id: PBO:0012054
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as Ino80 complex subunit, possibly incorrect","termid":"PBO:0012054"}


id: PBO:0050690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 17","termid":"PBO:0050690"}


id: PBO:0088670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L23","termid":"PBO:0088670"}


id: MONDO:0014568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 73 (SPG73) is a pure form of hereditary spastic paraplegia characterized by adult onset of crural spastic paraparesis, hyperreflexia, extensor plantar responses, proximal muscle weakness, mild muscle atrophy, decreased vibration sensation at ankles, and mild urinary dysfunction. foot deformities have been reported to eventually occur in some patients. No abnormalities are noted on brain magnetic resonance imaging and peripheral nerve conduction velocity studies.","definition_xrefs":["Orphanet:444099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 73","secondary_identifiers":["UMLS:C5568981","OMIM:616282","GARD:17763","DOID:0110818","MEDGEN:1800404"],"synonyms":[{"name":"CPT1C autosomal dominant pure spastic paraplegia","type":"exact"},{"name":"SPG73","type":"exact"},{"name":"autosomal dominant pure spastic paraplegia caused by mutation in CPT1C","type":"exact"},{"name":"autosomal dominant spastic paraplegia 73","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 73","type":"exact"},{"name":"hereditary spastic paraplegia type 73","type":"exact"},{"name":"spastic paraplegia 73, autosomal dominant","type":"related"}],"termid":"MONDO:0014568","xrefs":{"Monarch":{"xref_id":"0014568"}}}


id: PBO:0042164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 25","termid":"PBO:0042164"}


id: FYPO:0004085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell growth is decreased during the vegetative growth phase of the life cycle. Cell growth is the irreversible increase in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell growth","termid":"FYPO:0003154"},{"relation_name":"is_a","term_name":"decreased cell growth","termid":"FYPO:0004075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased vegetative cell growth","synonyms":[{"name":"reduced vegetative cell growth","type":"exact"}],"termid":"FYPO:0004085"}


id: GO:0001654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight.","definition_xrefs":["GOC:jl","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"visual system development","termid":"GO:0150063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye development","secondary_identifiers":["GO:0042460","Wikipedia:Eye_development"],"termid":"GO:0001654"}


id: FYPO:0000906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion inheritance is abnormal. Mitochondrion inheritance is a cellular process that results in the distribution of mitochondria into daughter cells after mitosis or meiosis, mediated by interactions between mitochondria and the cytoskeleton.","definition_xrefs":["GO:0000001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial distribution","termid":"FYPO:0000489"},{"relation_name":"is_a","term_name":"abnormal mitochondrion inheritance","termid":"FYPO:0007274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal mitochondrion inheritance during vegetative growth","synonyms":[{"name":"abnormal mitochondrial inheritance during vegetative growth","type":"exact"},{"name":"abnormal mitochondrion inheritance during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000906"}


id: SO:0000319
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"In mRNA, a set of three nucleotides that indicates the end of information for protein synthesis.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"codon","termid":"SO:0000360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_codon","secondary_identifiers":["http://en.wikipedia.org/wiki/Stop_codon"],"synonyms":[{"name":"stop codon","type":"exact"}],"termid":"SO:0000319"}


id: MONDO:1011458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma, primary closed-angle that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma, non-human animal","termid":"MONDO:1011457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, primary closed-angle, non-human animal","secondary_identifiers":["OMIA:001871"],"termid":"MONDO:1011458","xrefs":{"Monarch":{"xref_id":"1011458"}}}


id: PBO:0046971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member H","termid":"PBO:0046971"}


id: PBO:0081607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF529 antisense RNA 1","termid":"PBO:0081607"}


id: PBO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD/NADH kinase (predicted)","termid":"PBO:0002041"}


id: PBO:0081730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 660","termid":"PBO:0081730"}


id: PBO:0068124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 431","termid":"PBO:0068124"}


id: PBO:0088312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi galactosylxylosylprotein 3-beta-galactosyltransferase Pvg3","termid":"PBO:0088312"}


id: PR:O94277
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminodeoxychorismate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.29","synonyms":[{"name":"ADC synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"P-aminobenzoic acid synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PABA synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-abz1","type":"exact"},{"name":"para-aminobenzoate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94277"}


id: PBO:0069234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 489, pseudogene","termid":"PBO:0069234"}


id: MONDO:0957985
data:
  {"annotated_genes":["SJAG_01477"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86409],"is_not":false,"summary":null,"term":"MONDO:0957985"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration, childhood-onset, with cerebellar ataxia and cognitive decline","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5882726","MEDGEN:1847831","OMIM:620636"],"termid":"MONDO:0957985","terms_by_termid":{"MONDO:0957985":null},"xrefs":{"Monarch":{"xref_id":"0957985"}}}


id: GO:0046401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the core region of bacterial lipopolysaccharides, which contains ten saccharide residues. The structure of this core oligosaccharide appears to be similar in closely related bacterial strains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"part_of","term_name":"lipopolysaccharide metabolic process","termid":"GO:0008653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"lipopolysaccharide core region metabolic process","synonyms":[{"name":"LPS core region metabolic process","type":"exact"},{"name":"lipopolysaccharide core region metabolism","type":"exact"}],"termid":"GO:0046401"}


id: GO:0043214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a bacteriocin from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate.","definition_xrefs":["PMID:33040342","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type xenobiotic transporter activity","termid":"GO:0008559"},{"relation_name":"is_a","term_name":"bacteriocin transmembrane transporter activity","termid":"GO:0022885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type bacteriocin transporter activity","synonyms":[{"name":"ABC-type bacteriocin transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled bacteriocin transmembrane transporter activity","type":"related"},{"name":"bacteriocin ABC transporter","type":"exact"}],"termid":"GO:0043214"}


id: PBO:0017584
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RTS1","termid":"PBO:0017584"}


id: PBO:0078882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily V member 5","termid":"PBO:0078882"}


id: MONDO:1011350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Premature aging syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premature aging syndrome, non-human animal","termid":"MONDO:1011350","xrefs":{"Monarch":{"xref_id":"1011350"}}}


id: GO:1990803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation process involved in localizing a protein to the spindle microtubule.","definition_xrefs":["GO_REF:0000060","GOC:rb","GOC:TermGenie","PMID:22521784"],"gene_count":0,"genotype_count":0,"name":"obsolete protein phosphorylation involved in protein localization to spindle microtubule (obsolete GO:1990803)","synonyms":[{"name":"protein amino acid phosphorylation involved in protein localisation in spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localisation to spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localization in spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localization to spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localisation in spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localisation to spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localization in spindle microtubule","type":"exact"}],"termid":"GO:1990803"}


id: PBO:0068593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 44, pseudogene","termid":"PBO:0068593"}


id: GO:0047060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantolactone + A = 2-dehydropantolactone + AH(2).","definition_xrefs":["EC:1.1.99.27","RHEA:21004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(R)-pantolactone dehydrogenase (flavin) activity","secondary_identifiers":["KEGG_REACTION:R03156","MetaCyc:1.1.99.27-RXN"],"synonyms":[{"name":"(R)-pantolactone:acceptor oxidoreductase (flavin-containing)","type":"related"},{"name":"(R)-pantoyllactone dehydrogenase (flavin) activity","type":"related"},{"name":"2-dehydropantolactone reductase (flavin) activity","type":"related"},{"name":"2-dehydropantoyl-lactone reductase (flavin) activity","type":"related"}],"termid":"GO:0047060"}


id: GO:0030474
data:
  {"annotated_genes":["SJAG_03200","SJAG_04003","SJAG_01760","SJAG_03544","SJAG_04558"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90470,107739,115428,112946,113148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903087"}]},"cv_name":"biological_process","definition":"Construction of a new spindle pole body.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"spindle pole body organization","termid":"GO:0051300"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01760":null,"SJAG_03200":null,"SJAG_03544":null,"SJAG_04003":null,"SJAG_04558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0044085","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"spindle pole body duplication","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007103","GO:0031046"],"synonyms":[{"name":"spindle pole body assembly","type":"exact"},{"name":"spindle pole body biogenesis","type":"exact"},{"name":"spindle pole body biosynthesis","type":"exact"},{"name":"spindle pole body duplication associated with nuclear envelope","type":"exact"},{"name":"spindle pole body duplication in cytoplasm","type":"exact"},{"name":"spindle pole body formation","type":"exact"},{"name":"spindle pole body replication","type":"exact"}],"termid":"GO:0030474","terms_by_termid":{"GO:1903087":null}}


id: GO:1902430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amyloid-beta formation.","definition_xrefs":["GOC:hjd","GOC:TermGenie","PMID:22992957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"regulation of amyloid-beta formation","termid":"GO:1902003"},{"relation_name":"is_a","term_name":"negative regulation of amyloid precursor protein catabolic process","termid":"GO:1902992"},{"relation_name":"negatively_regulates","term_name":"amyloid-beta formation","termid":"GO:0034205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amyloid-beta formation","synonyms":[{"name":"down regulation of beta-amyloid formation","type":"exact"},{"name":"down-regulation of beta-amyloid formation","type":"exact"},{"name":"downregulation of beta-amyloid formation","type":"exact"},{"name":"inhibition of beta-amyloid formation","type":"narrow"},{"name":"negative regulation of beta-amyloid formation","type":"exact"}],"termid":"GO:1902430"}


id: PBO:0046527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum oxidoreductase 1 beta","termid":"PBO:0046527"}


id: GO:0005941
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Used as a holding place for cellular components whose precise localization is, as yet, unknown, or has not been determined by GO (the latter is the major reason for nodes to have this parent); this term should not be used for annotation of gene products.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete unlocalized protein complex (obsolete GO:0005941)","synonyms":[{"name":"unlocalized protein complex","type":"exact"}],"termid":"GO:0005941"}


id: FYPO:0009046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of phloxine B and hydrogen peroxide than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002682","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to phloxine B and hydrogen peroxide","synonyms":[{"name":"resistance to phloxine B and hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"resistance to phloxine B and hydrogen peroxide during vegetative growth","type":"exact"},{"name":"resistance to phloxine B and hydrogen peroxide in combination","type":"exact"},{"name":"resistant to phloxine B and hydrogen peroxide","type":"exact"}],"termid":"FYPO:0009046"}


id: FYPO:0004140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of glutathione (GSH) measured in a cell that is subject to nitrogen starvation is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular glutathione level during nitrogen starvation","synonyms":[{"name":"increased cellular GSH level during nitrogen starvation","type":"exact"},{"name":"increased cellular L-gamma-glutamyl-L-cysteinylglycine level during nitrogen starvation","type":"exact"},{"name":"increased cellular glutathione level during nitrogen depletion","type":"exact"},{"name":"increased cellular glutathione level during nitrogen deprivation","type":"exact"},{"name":"increased cellular reduced glutathione level during nitrogen starvation","type":"exact"},{"name":"increased glutathione accumulation during nitrogen starvation","type":"related"}],"termid":"FYPO:0004140"}


id: PBO:0040864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix ARNT like 1","termid":"PBO:0040864"}


id: PBO:0077313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 51","termid":"PBO:0077313"}


id: PBO:0014260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved ATP binding protein, implicated in sister chromatid cohesion Gpn2 (predicted)","termid":"PBO:0014260"}


id: MONDO:1010991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, cattle","secondary_identifiers":["OMIA:000487-9913"],"termid":"MONDO:1010991","xrefs":{"Monarch":{"xref_id":"1010991"}}}


id: GO:0039523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the transcription of genes into mRNA in its host by directly inhibiting host RNA polymerase II activity. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:25233083","PMID:36144426","GOC:sp","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host transcription","termid":"GO:0039653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host mRNA transcription via inhibition of RNA polymerase II activity","synonyms":[{"name":"inhibition of host RNA polymerase II activity by virus","type":"narrow"},{"name":"inhibition of host RNA polymerase II by virus","type":"exact"},{"name":"negative regulation by virus of host RNA polymerase II activity","type":"narrow"},{"name":"suppression by virus of host RNA polymerase II activity","type":"narrow"},{"name":"suppression by virus of host mRNA transcription via inhibition of RNA polymerase II activity","type":"narrow"}],"termid":"GO:0039523"}


id: PBO:0087701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RES complex; RES complex is required for nuclear pre-mRNA retention and splicing; involved in bud-site selection; diploid mutants display a unipolar budding pattern instead of the wild-type bipolar pattern due to a specific defect in MATa1 pre-mRNA splicing which leads to haploid gene expression in diploids","termid":"PBO:0087701"}


id: GO:0102915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (+)-pinoresinol + NADPH + O2 = (+)-piperitol + NADP + 2 H2O.","definition_xrefs":["PMID:16785429","EC:1.14.19.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"piperitol synthase activity","termid":"GO:0102915"}


