# terms

id: PBO:0042320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD40 molecule","termid":"PBO:0042320"}


id: PBO:0085473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme; regulates nuclear growth by controlling phospholipid biosynthesis, required for normal nuclear envelope morphology and sporulation; homolog of the human protein Dullard","termid":"PBO:0085473"}


id: PR:Q9C0Y9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB24D3.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Y9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.03","synonyms":[{"name":"AUH 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAPB24D3.03","type":"exact"},{"name":"agmatine ureohydrolase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C0Y9"}


id: PBO:0066334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 and BTB domain containing protein 2 pseudogene 1","termid":"PBO:0066334"}


id: MONDO:0021220
data:
  {"annotated_genes":["SJAG_03453","SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[86236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the eye.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03453":null,"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"eye neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0003824","ICD10CM:C69-C72","ONCOTREE:EYE","MEDGEN:5095","NCIT:C3030","UMLS:C0015414"],"synonyms":[{"name":"eye neoplasm (disease)","type":"exact"},{"name":"eye tumor","type":"exact"},{"name":"eye tumour","type":"exact"},{"name":"eyeball of camera-type eye neoplasm","type":"exact"},{"name":"eyeball of camera-type eye tumor","type":"exact"},{"name":"eyeball of camera-type eye tumour","type":"exact"},{"name":"neoplasm of eye","type":"exact"},{"name":"neoplasm of eyeball of camera-type eye","type":"exact"},{"name":"neoplasm of the eye","type":"exact"},{"name":"ocular neoplasm","type":"exact"},{"name":"ocular tumor","type":"exact"},{"name":"ocular tumour","type":"exact"},{"name":"tumor of eye","type":"exact"},{"name":"tumor of eyeball of camera-type eye","type":"exact"},{"name":"tumor of the eye","type":"exact"},{"name":"tumour of eye","type":"exact"},{"name":"tumour of eyeball of camera-type eye","type":"exact"},{"name":"tumour of the eye","type":"exact"}],"termid":"MONDO:0021220","terms_by_termid":{"MONDO:0008097":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0021220"}}}


id: PBO:0050301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 3","termid":"PBO:0050301"}


id: PBO:0051732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 4 pseudogene 1","termid":"PBO:0051732"}


id: GO:0040016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The first few specialized divisions of an activated animal egg.","definition_xrefs":["ISBN:0070524300","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic cleavage","termid":"GO:0040016"}


id: GO:0002048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the siderochrome pyoverdine.","definition_xrefs":["PMID:15317763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"pyoverdine metabolic process","synonyms":[{"name":"pyoverdine metabolism","type":"exact"}],"termid":"GO:0002048"}


id: PBO:0069156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 408, pseudogene","termid":"PBO:0069156"}


id: GO:0140676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fluctuation in the extracellular cAMP levels due to the alternate activation of adenylate cyclase, which produces cAMP, and phosphodiesterase, which degrades it. Occurs in Dictyostelium during early sorocarp development. Oscillation in signaling result is directional chemotaxis of cells towards the center of the aggregate.","definition_xrefs":["PMID:18657484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"oscillatory cAMP signaling","synonyms":[{"name":"cAMP relay","type":"exact"}],"termid":"GO:0140676"}


id: GO:0061834
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of an actin filament where the structure forks.","definition_xrefs":["PMID:18256280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"actin filament","termid":"GO:0005884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"actin filament branch point","synonyms":[{"name":"microfilament branch point","type":"exact"}],"termid":"GO:0061834"}


id: PBO:0056761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 15","termid":"PBO:0056761"}


id: PBO:0045649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 7","termid":"PBO:0045649"}


id: GO:0009341
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses beta-galactosidase activity, i.e. catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. In E. coli, the complex is a homotetramer; dimeric and hexameric beta-galactosidase complexes have been observed in other species.","definition_xrefs":["PMID:15950161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"beta-galactosidase complex","termid":"GO:0009341"}


id: PBO:0079940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USH1 protein network component sans","termid":"PBO:0079940"}


id: PBO:0028187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_length","termid":"PBO:0028187"}


id: PBO:0043355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRN1 antisense RNA 1","termid":"PBO:0043355"}


id: PBO:0060005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 25","termid":"PBO:0060005"}


id: GO:0040036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"regulation of FGF receptor signaling pathway","type":"exact"},{"name":"regulation of FGF receptor signalling pathway","type":"exact"},{"name":"regulation of FGFR signaling pathway","type":"exact"}],"termid":"GO:0040036"}


id: FYPO:0003871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is abnormal when the cell is in G0 phase. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["GO:0006325","PMID:20133687","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal chromatin organization during G0","synonyms":[{"name":"abnormal chromatin organisation during G0","type":"exact"},{"name":"abnormal chromatin organization during cell quiescence","type":"exact"},{"name":"abnormal chromatin organization during quiescence","type":"exact"}],"termid":"FYPO:0003871"}


id: PBO:0109301
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codon-optimization increases the mRNA concentration","termid":"PBO:0109301"}


id: MONDO:1012139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia, non-human animal","termid":"MONDO:1011925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia, domestic cat","secondary_identifiers":["OMIA:000573-9685"],"termid":"MONDO:1012139","xrefs":{"Monarch":{"xref_id":"1012139"}}}


id: GO:1902259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:rl","PMID:11299204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"}


id: PBO:0049253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRTP1 antisense RNA 1","termid":"PBO:0049253"}


id: PBO:0113424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Saccharopine dehydrogenase (NAD+, L-lysine-forming); catalyzes the conversion of saccharopine to L-lysine, which is the final step in the lysine biosynthesis pathway; contains mRNA binding activity; required for targeting of Pls1p to the peroxisomal matrix in the absence of lysine","termid":"PBO:0113424"}


id: PBO:0065895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB40A like","termid":"PBO:0065895"}


id: MONDO:0011533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disease that is characterized by brachydactyly, hyperphalangism of digits, facial dysmorphism, dental anomalies, sensorineural hearing loss, delayed motor and mental development, and growth retardation and has material basis in homozygous mutation in the CHSY1 gene.","definition_xrefs":["DOID:0050814","PMID:21129728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"temtamy preaxial brachydactyly syndrome","secondary_identifiers":["Orphanet:363417","UMLS:C1854466","OMIM:605282","MEDGEN:381425","GARD:9679","MESH:C536958"],"synonyms":[{"name":"TEMTAMY preaxial brachydactyly syndrome","type":"related"},{"name":"TPBS","type":"related"},{"name":"intellectual disability syndrome with preaxial brachydactyly, hyperphalangism, deafness and orodental anomalies","type":"related"},{"name":"mental retardation syndrome with preaxial brachydactyly, hyperphalangism, deafness and orodental anomalies","type":"related"},{"name":"preaxial brachydactyly syndrome, TEMTAMY type","type":"exact"},{"name":"preaxial brachydactyly syndrome, Temtamy type","type":"related"},{"name":"temtamy preaxial brachydactyly syndrome","type":"exact"}],"termid":"MONDO:0011533","xrefs":{"Monarch":{"xref_id":"0011533"}}}


id: PBO:0005017
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.56","termid":"PBO:0005017"}


id: PBO:0076441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 13","termid":"PBO:0076441"}


id: PBO:0108996
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submitter_comment","termid":"PBO:0108996"}


id: MONDO:0060502
data:
  {"annotated_genes":["SJAG_00312"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85878],"is_not":false,"summary":null,"term":"MONDO:0060502"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"neurodevelopmental disorder with progressive microcephaly, spasticity, and brain anomalies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617527","UMLS:C4479631","Orphanet:521426","MEDGEN:1380260","GARD:17960"],"synonyms":[{"name":"NDMSBA","type":"related"},{"name":"neurodevelopmental disorder with progressive microcephaly, spasticity, and brain anomalies","type":"exact"}],"termid":"MONDO:0060502","terms_by_termid":{"MONDO:0060502":null},"xrefs":{"Monarch":{"xref_id":"0060502"}}}


id: PBO:0074234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 47 member 2","termid":"PBO:0074234"}


id: PBO:0068322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 20","termid":"PBO:0068322"}


id: GO:0009443
data:
  {"annotated_genes":["SJAG_00252","SJAG_00707","SJAG_01383"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75573,78495],"is_not":false,"summary":null,"term":"GO:0009443"},{"annotations":[112134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"Any process that generates pyridoxal 5'-phosphate, the active form of vitamin B6, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal phosphate biosynthetic process","termid":"GO:0042823"},{"relation_name":"is_a","term_name":"metabolic compound salvage","termid":"GO:0043094"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00707":null,"SJAG_01383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"pyridoxal 5'-phosphate salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PLPSAL-PWY"],"synonyms":[{"name":"pyridoxal 5' phosphate salvage","type":"exact"}],"termid":"GO:0009443","terms_by_termid":{"GO:0009443":null,"GO:0010144":null}}


id: PBO:0029772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spore_shape","termid":"PBO:0029772"}


id: MONDO:0016719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-seizures-intellectual disability-heart disease syndrome is characterized by intellectual deficit, a cardiac anomaly, micropenis, hypothyroidism, epileptic seizures, and skeletal anomalies. It has been described in two males.","definition_xrefs":["Orphanet:2519"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-seizures-intellectual disability-heart disease syndrome","secondary_identifiers":["GARD:18774","MESH:C537544","UMLS:C2931529","MEDGEN:419830"],"synonyms":[{"name":"microcephaly seizures intellectual disability heart disorders","type":"related"},{"name":"microcephaly seizures mental retardation heart disorders","type":"related"},{"name":"microcephaly, seizures, intellectual disability, congenital heart disease, and skeletal abnormalities","type":"related"},{"name":"microcephaly, seizures, mental retardation, congenital heart disease, and skeletal abnormalities","type":"related"}],"termid":"MONDO:0016719","xrefs":{"Monarch":{"xref_id":"0016719"}}}


id: SOFP:gbunit
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Name of genbank scaffold sequence intersected by the feature","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gbunit","termid":"SOFP:gbunit"}


id: PBO:0005808
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the chromatin assembly function of H2Bub is independent of H3K4 methylation","termid":"PBO:0005808"}


id: SO:0000442
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A double stranded oligonucleotide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ds_oligo","synonyms":[{"name":"double stranded oligonucleotide","type":"exact"},{"name":"ds oligo","type":"exact"},{"name":"ds-oligonucleotide","type":"exact"}],"termid":"SO:0000442"}


id: MONDO:0001481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thrombophlebitis that involves the femoral vein.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombophlebitis","termid":"MONDO:0002800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"femoral vein thrombophlebitis","secondary_identifiers":["DOID:12282","SCTID:1748006","ICD9:451.11","MEDGEN:539052","UMLS:C0265066"],"synonyms":[{"name":"femoral vein thrombophlebitis","type":"exact"},{"name":"phlebitis and thrombophlebitis of femoral vein","type":"exact"},{"name":"phlebitis and thrombophlebitis of femoral vein (deep) (superficial)","type":"exact"},{"name":"thrombophlebitis of deep femoral vein","type":"exact"},{"name":"thrombophlebitis of femoral vein","type":"exact"},{"name":"thrombophlebitis of the femoral vein","type":"exact"}],"termid":"MONDO:0001481","xrefs":{"Monarch":{"xref_id":"0001481"}}}


id: GO:0009436
data:
  {"annotated_genes":["SJAG_01432","SJAG_00281"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101347,105409],"is_not":false,"summary":null,"term":"GO:0009436"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glyoxylate, the anion of glyoxylic acid, HOC-COOH.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"glyoxylate metabolic process","termid":"GO:0046487"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glyoxylate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLYOXDEG-PWY"],"synonyms":[{"name":"glyoxylate breakdown","type":"exact"},{"name":"glyoxylate catabolism","type":"exact"},{"name":"glyoxylate degradation","type":"exact"}],"termid":"GO:0009436","terms_by_termid":{"GO:0009436":null}}


id: GO:0050861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell receptor signaling pathway","termid":"GO:0050855"},{"relation_name":"is_a","term_name":"positive regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050857"},{"relation_name":"positively_regulates","term_name":"B cell receptor signaling pathway","termid":"GO:0050853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell receptor signaling pathway","synonyms":[{"name":"activation of B cell receptor signaling pathway","type":"narrow"},{"name":"positive regulation of B cell receptor signalling pathway","type":"exact"},{"name":"positive regulation of B lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of B lymphocyte receptor signalling pathway","type":"exact"},{"name":"positive regulation of B-cell receptor signaling pathway","type":"exact"},{"name":"positive regulation of B-cell receptor signalling pathway","type":"exact"},{"name":"positive regulation of B-lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of B-lymphocyte receptor signalling pathway","type":"exact"},{"name":"stimulation of B cell receptor signaling pathway","type":"narrow"},{"name":"up regulation of B cell receptor signaling pathway","type":"exact"},{"name":"up-regulation of B cell receptor signaling pathway","type":"exact"},{"name":"upregulation of B cell receptor signaling pathway","type":"exact"}],"termid":"GO:0050861"}


id: PBO:0080416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 subunit of GARP complex","termid":"PBO:0080416"}


id: GO:1903624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:2001740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA catabolic process","termid":"GO:0006308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA catabolic process","synonyms":[{"name":"regulation of DNA breakdown","type":"exact"},{"name":"regulation of DNA catabolism","type":"exact"},{"name":"regulation of DNA degradation","type":"exact"}],"termid":"GO:1903624"}


id: FYPO:0004677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which purine-specific mismatch base pair DNA N-glycosylase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal purine-specific mismatch base pair DNA N-glycosylase activity","termid":"FYPO:0004676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abolished purine-specific mismatch base pair DNA N-glycosylase activity","synonyms":[{"name":"purine-specific mismatch base pair DNA N-glycosylase activity abolished","type":"exact"}],"termid":"FYPO:0004677"}


id: PBO:0068370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 152 pseudogene 1","termid":"PBO:0068370"}


id: PBO:0090333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER GPI biosynthesis protein Rft1","termid":"PBO:0090333"}


id: MONDO:0019166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete strongyloidiasis (obsolete MONDO:0019166)","termid":"MONDO:0019166","xrefs":{"Monarch":{"xref_id":"0019166"}}}


id: MOD:01085
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-N-gluconoylation (His Tagged proteins)","termid":"MOD:01085"}


id: MONDO:0009838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder characterized by rigid, thick skin that covers the entire body and affects movements. The movement of the chest and abdomen is severely restricted. Affected individuals develop respiratory insufficiency which may lead to death.","definition_xrefs":["NCIT:C126559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Parana hard-skin syndrome","secondary_identifiers":["Orphanet:2812","MEDGEN:337964","OMIM:260530","UMLS:C1850079","GARD:2598","MESH:C564905"],"synonyms":[{"name":"Parana hard skin syndrome","type":"related"},{"name":"Parana hard-skin syndrome","type":"exact"},{"name":"hard skin syndrome Parana type","type":"exact"},{"name":"hard skin syndrome, Parana type","type":"exact"},{"name":"hard-skin syndrome, Parana type","type":"exact"}],"termid":"MONDO:0009838","xrefs":{"Monarch":{"xref_id":"0009838"}}}


id: PBO:0004252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxyl methyl esterase (predicted)","termid":"PBO:0004252"}


id: PBO:0030446
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphatase_activity","termid":"PBO:0030446"}


id: FYPO:0004327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to sorbitol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to sorbitol","synonyms":[{"name":"normal protein phosphorylation during cellular response to sorbitol during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to sorbitol during vegetative growth","type":"exact"}],"termid":"FYPO:0004327"}


id: PBO:0025469
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult Refsum disease","termid":"PBO:0025469"}


id: GO:0071233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-leucine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to L-leucine","termid":"GO:0043201"},{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-leucine","synonyms":[{"name":"cellular response to leucine","type":"broad"}],"termid":"GO:0071233"}


id: GO:2000841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dehydroepiandrosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"regulation of dehydroepiandrosterone secretion","termid":"GO:2000840"},{"relation_name":"negatively_regulates","term_name":"dehydroepiandrosterone secretion","termid":"GO:0035942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dehydroepiandrosterone secretion","synonyms":[{"name":"negative regulation of 3beta-hydroxyandrost-5-en-17-one secretion","type":"exact"},{"name":"negative regulation of DHEA secretion","type":"exact"},{"name":"negative regulation of dehydroisoandrosterone secretion","type":"exact"}],"termid":"GO:2000841"}


id: PBO:0043397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"c-Maf inducing protein","termid":"PBO:0043397"}


id: GO:0052879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8R,9Z,12Z)-8-hydroperoxyoctadeca-9,12-dienoate = (7S,8S,9Z,12Z)-7,8-dihydroxyoctadeca-9,12-dienoate.","definition_xrefs":["RHEA:25399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"9,12-octadecadienoate 8-hydroperoxide 8S-isomerase activity","secondary_identifiers":["MetaCyc:RXN-12758","EC:5.4.4.6","KEGG_REACTION:R07062"],"synonyms":[{"name":"(8R,9Z,12Z)-8-hydroperoxy-9,12-octadecadienoate mutase ((7S,8S,9Z,12Z)-5,8-dihydroxy-9,12-octadecadienoate-forming) activity","type":"related"},{"name":"8-hydroperoxide isomerase activity","type":"broad"},{"name":"linoleate diol synthase activity","type":"related"}],"termid":"GO:0052879"}


id: PBO:0089431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg1","termid":"PBO:0089431"}


id: MOD:00132
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and an L-lysine residue to release water and form 2-amino-6-(2-amino-2-carboxyethylamino)hexanoic acid.","definition_xrefs":["PubMed:2544544","RESID:AA0123#KSX","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"L-lysinoalanine","termid":"MOD:01853"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysinoalanine (Lys-Ser)","synonyms":[{"name":"(2R,9S)-lysinoalanine","type":"exact"},{"name":"(2S)-2-amino-6-([(2R)-2-amino-2-carboxyethyl]amino)hexanoic acid","type":"exact"},{"name":"CROSSLNK Lysinoalanine (Ser-Lys)","type":"exact"},{"name":"L-lysinoalanine","type":"exact"},{"name":"LAL","type":"exact"},{"name":"Lysinoalanine (from Cysteine)","type":"exact"},{"name":"N-epsilon-(2-amino-2-carboxyethyl)-L-lysine","type":"exact"},{"name":"N6-(2-amino-2-carboxyethyl)-L-lysine","type":"exact"},{"name":"XLNK-N6Lys-3Dha(Ser)","type":"exact"},{"name":"alaninolysine","type":"exact"}],"termid":"MOD:00132"}


id: PBO:0091461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi3","termid":"PBO:0091461"}


id: PBO:0081091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC20 intronic transcript 1","termid":"PBO:0081091"}


id: PBO:0030048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ferric_iron_import","termid":"PBO:0030048"}


id: MONDO:0033493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary gingival fibromatosis","termid":"MONDO:0016070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis, gingival, 5","secondary_identifiers":["UMLS:C4539942","DOID:0080280","OMIM:617626","GARD:18357","MEDGEN:1624392"],"synonyms":[{"name":"GGF5","type":"related"},{"name":"GINGF5","type":"related"},{"name":"fibromatosis, gingival, 5","type":"exact"},{"name":"fibromatosis, gingival, hereditary, 5","type":"related"},{"name":"gingival fibromatosis 5","type":"related"}],"termid":"MONDO:0033493","xrefs":{"Monarch":{"xref_id":"0033493"}}}


id: PBO:0064165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVC","termid":"PBO:0064165"}


id: MONDO:0019845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired pituitary hormone deficiency","termid":"MONDO:0019832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iatrogenic or traumatic pituitary deficiency","secondary_identifiers":["UMLS:C0342400","Orphanet:95619","MEDGEN:575005","GARD:19290"],"termid":"MONDO:0019845","xrefs":{"Monarch":{"xref_id":"0019845"}}}


id: PBO:0006206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-chemical,_gene_product,_or_complex","termid":"PBO:0006206"}


id: PBO:0066377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDM1 pseudogene 4","termid":"PBO:0066377"}


id: MONDO:0019158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tropical endomyocardial fibrosis is a restrictive cardiopathy, occurring almost exclusively in children and young adults in tropical and subtropical regions, characterized by endocardial fibrosis, affecting the apices and the inflow tract of the right or left ventricle (or both) and manifesting with a restrictive cardimyopathy and atrioventricular regurgitation leading to severe pulmonary hypertension, very high systemic venous pressure and congestive cardiac failure. Suspected etiologies include helminth and protozoal infestation and malnutrition.","definition_xrefs":["Orphanet:75565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"tropical endomyocardial fibrosis","secondary_identifiers":["UMLS:C2882252","GARD:18928","MEDGEN:909153","SCTID:715626008"],"synonyms":[{"name":"Davies disease","type":"exact"},{"name":"TEMF","type":"exact"}],"termid":"MONDO:0019158","xrefs":{"Monarch":{"xref_id":"0019158"}}}


id: MONDO:0009196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare deafness characterized by the association of bilateral sensorineural hearing loss and white hair with scattered black tufts, as well as skin areas of hyper- and hypopigmentation. Additional reported features include global developmental delay and moderate intellectual disability, growth retardation, microcephaly, hypotonia, mild dysmorphic facial features (deeply set eyes, broad nasal bridge, slight bowing of the upper lip), retinal depigmentation, anomalies of the fingers and toes, and white matter abnormalities on brain imaging.","definition_xrefs":["Orphanet:999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ermine phenotype","secondary_identifiers":["UMLS:C1856899","MESH:C535508","ICD10CM:E70.3","icd11.foundation:2048725507","GARD:407","ICD9:270.2","MEDGEN:346466","MESH:C562663","SCTID:10170007","OMIM:227010"],"synonyms":[{"name":"BADS","type":"related"},{"name":"BADS syndrome","type":"related"},{"name":"O'Doherty syndrome","type":"exact"},{"name":"black locks with albinism and deafness syndrome","type":"related"},{"name":"black locks, oculocutaneous albinism, and deafness of the sensorineural type","type":"related"},{"name":"ermine phenotype","type":"exact"},{"name":"pigmentary disorder with hearing loss","type":"exact"}],"termid":"MONDO:0009196","xrefs":{"Monarch":{"xref_id":"0009196"}}}


id: PBO:0077444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 178A","termid":"PBO:0077444"}


id: PBO:0088718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo-family BRCT domain protein Ppp1","termid":"PBO:0088718"}


id: PBO:0056625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 6 pseudogene 1","termid":"PBO:0056625"}


id: GO:0046319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosylceramide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucosylceramide biosynthetic process","termid":"GO:0046317"},{"relation_name":"is_a","term_name":"positive regulation of ceramide biosynthetic process","termid":"GO:2000304"},{"relation_name":"positively_regulates","term_name":"glucosylceramide biosynthetic process","termid":"GO:0006679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of glucosylceramide biosynthetic process","synonyms":[{"name":"activation of glucosylceramide biosynthetic process","type":"narrow"},{"name":"positive regulation of glucosylceramide anabolism","type":"exact"},{"name":"positive regulation of glucosylceramide biosynthesis","type":"exact"},{"name":"positive regulation of glucosylceramide formation","type":"exact"},{"name":"positive regulation of glucosylceramide synthesis","type":"exact"},{"name":"stimulation of glucosylceramide biosynthetic process","type":"narrow"},{"name":"up regulation of glucosylceramide biosynthetic process","type":"exact"},{"name":"up-regulation of glucosylceramide biosynthetic process","type":"exact"},{"name":"upregulation of glucosylceramide biosynthetic process","type":"exact"}],"termid":"GO:0046319"}


id: PBO:0111522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 2","termid":"PBO:0111522"}


id: GO:0061811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD = cyclic ADP-ribose + nicotinamide.","definition_xrefs":["PMID:11866528","GOC:dph","GOC:pad","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP-ribosyl cyclase activity (obsolete GO:0061811)","termid":"GO:0061811"}


id: GO:0061116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis process in which the ductus venosus changes to no longer permit blood flow after birth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ductus venosus closure","termid":"GO:0061116"}


id: PBO:0026892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_vegetative_growth","termid":"PBO:0026892"}


id: MONDO:0006468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary carcinoma of the thyroid gland composed of undifferentiated cells. The malignant cells demonstrate evidence of epithelial differentiation, either by immunohistochemistry or electron microscopic studies. Microscopically, in the majority of cases there is a mixture of spindle, epithelioid, and giant cells. The vast majority of the patients present with a rapidly enlarging neck mass. The clinical course is usually aggressive.","definition_xrefs":["NCIT:C3878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large cell carcinoma","termid":"MONDO:0005232"},{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"},{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland undifferentiated (anaplastic) carcinoma","secondary_identifiers":["Orphanet:142","HP:0011779","MedDRA:10002240","EFO:1000595","ONCOTREE:THAP","icd11.foundation:320540024","DOID:0080522","SCTID:255031003","GARD:664","MESH:D065646","UMLS:C0238461","MEDGEN:116064"],"synonyms":[{"name":"Dedifferentiated thyroid gland carcinoma","type":"exact"},{"name":"THAP","type":"related"},{"name":"anaplastic carcinoma of the thyroid","type":"exact"},{"name":"anaplastic carcinoma of the thyroid gland","type":"exact"},{"name":"anaplastic carcinoma of thyroid","type":"exact"},{"name":"anaplastic carcinoma of thyroid gland","type":"exact"},{"name":"anaplastic thyroid cancer","type":"exact"},{"name":"anaplastic thyroid carcinoma","type":"exact"},{"name":"anaplastic thyroid gland carcinoma","type":"exact"},{"name":"metaplastic thyroid gland carcinoma","type":"exact"},{"name":"pleomorphic thyroid gland carcinoma","type":"exact"},{"name":"sarcomatoid thyroid gland carcinoma","type":"exact"},{"name":"thyroid cancer, anaplastic","type":"related"},{"name":"thyroid carcinoma, anaplastic","type":"related"},{"name":"thyroid gland carcinosarcoma","type":"exact"},{"name":"thyroid gland undifferentiated (anaplastic) carcinoma","type":"exact"},{"name":"thyroid gland undifferentiated carcinoma","type":"exact"},{"name":"undifferentiated (anaplastic) thyroid gland cancer","type":"exact"},{"name":"undifferentiated (anaplastic) thyroid gland carcinoma","type":"exact"},{"name":"undifferentiated carcinoma of the thyroid","type":"exact"},{"name":"undifferentiated carcinoma of the thyroid gland","type":"exact"},{"name":"undifferentiated carcinoma of thyroid","type":"exact"},{"name":"undifferentiated carcinoma of thyroid gland","type":"exact"},{"name":"undifferentiated thyroid carcinoma","type":"exact"},{"name":"undifferentiated thyroid gland carcinoma","type":"exact"},{"name":"undifferentiated thyroid tumor","type":"exact"},{"name":"undifferentiated thyroid tumour","type":"exact"}],"termid":"MONDO:0006468","xrefs":{"Monarch":{"xref_id":"0006468"}}}


id: PBO:0117139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM2 antisense RNA 3","termid":"PBO:0117139"}


id: PBO:0012036
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPCC663.03, pmd1 is more closely related to S. cerevisiae STE6","termid":"PBO:0012036"}


id: PBO:0116771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCF25 ribosome quality control complex subunit","termid":"PBO:0116771"}


id: GO:1904386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-phenylalanine derivative stimulus.","definition_xrefs":["PMID:12112407","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-phenylalanine derivative","termid":"GO:1904386"}


id: MONDO:1011222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal detachment that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal detachment, non-human animal","termid":"MONDO:1010321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal detachment, domestic cat","secondary_identifiers":["OMIA:000275-9685"],"termid":"MONDO:1011222","xrefs":{"Monarch":{"xref_id":"1011222"}}}


id: PR:Q9P6L5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- end4 gene.","definition_xrefs":["UniProtKB:Q9P6L5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytosis protein end4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.11","synonyms":[{"name":"SLA2 protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-end4","type":"exact"}],"termid":"PR:Q9P6L5"}


id: PBO:0078571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51E, pseudogene","termid":"PBO:0078571"}


id: PBO:0065267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 29","termid":"PBO:0065267"}


id: GO:0045321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a leukocyte resulting from exposure to a specific antigen, mitogen, cytokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte activation","secondary_identifiers":["Wikipedia:Immunologic_activation"],"synonyms":[{"name":"immune cell activation","type":"exact"},{"name":"leucocyte activation","type":"exact"}],"termid":"GO:0045321"}


id: PBO:0052446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 2 pseudogene 3","termid":"PBO:0052446"}


id: FYPO:0005019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype observed in the vegetative growth phase of the life cycle in which the duration of septum assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal septum assembly","termid":"FYPO:0000673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal duration of septum assembly","synonyms":[{"name":"normal duration of division septum assembly","type":"exact"},{"name":"normal duration of septation","type":"broad"},{"name":"normal duration of septum assembly during mitotic cell cycle","type":"related"},{"name":"normal duration of septum assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005019"}


id: MONDO:0016217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mal de debarquement (MdD) is a rare otorhinolaryngological disease characterized by a persistent sensation of motion such as rocking, swaying, tumbling and/or bobbing following a period of exposure to passive movement, usually an ocean cruise or other types of water, train, automobile or air travel and less commonly other movements (like sleeping on a waterbed). Onset may be spontaneous in some patients. Manifestations begin shortly after the stimulus, persist for 6 months to years and may be associated with anxiety, fatigue and impaired cognition. Symptoms are often accentuated when in an enclosed space or when attempting to be motionless (sitting, lying down or standing in a stationary position) and are relieved when in passive motion such as in a moving car, airplane or train.","definition_xrefs":["Orphanet:210272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal de Debarquement","secondary_identifiers":["NORD:1394","GARD:6959","MEDGEN:345629","icd11.foundation:459420954","MESH:C537840","MedDRA:10064924","UMLS:C1608983","SCTID:446079007"],"synonyms":[{"name":"MDD","type":"exact"},{"name":"Mal de debarquement syndrome","type":"related"},{"name":"Mal de débarquement","type":"related"},{"name":"MdDS","type":"exact"},{"name":"disembarkment syndrome","type":"exact"},{"name":"sickness of disembarkment","type":"exact"}],"termid":"MONDO:0016217","xrefs":{"Monarch":{"xref_id":"0016217"}}}


id: GO:0010275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form NAD(P)H dehydrogenase complex, which is involved in electron transport from an unidentified electron donor, possibly NAD(P)H or ferredoxin(Fd) to the plastoquinone pool.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"NAD(P)H dehydrogenase complex assembly","synonyms":[{"name":"NAD(P)H dehydrogenase complex (plastoquinone) assembly","type":"narrow"}],"termid":"GO:0010275"}


id: MONDO:0016121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital myotonia (obsolete MONDO:0016121)","secondary_identifiers":["Orphanet:206973","icd11.foundation:1916703439"],"termid":"MONDO:0016121","xrefs":{"Monarch":{"xref_id":"0016121"}}}


id: PBO:0070269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 3","termid":"PBO:0070269"}


id: MONDO:0010042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic diplegia and intellectual disability","secondary_identifiers":["MESH:C537481","OMIM:270600","UMLS:C1849139","MEDGEN:376526"],"synonyms":[{"name":"hereditary spastic diplegia with intellectual disability","type":"related"},{"name":"hereditary spastic diplegia with mental retardation","type":"related"},{"name":"spastic diplegia and intellectual disability","type":"exact"},{"name":"spastic diplegia and mental retardation","type":"exact"},{"name":"spastic diplegia infantile type","type":"related"},{"name":"spastic diplegia, infantile type","type":"related"}],"termid":"MONDO:0010042","xrefs":{"Monarch":{"xref_id":"0010042"}}}


id: PBO:0060560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin pseudogene 4","termid":"PBO:0060560"}


id: GO:1990762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase involved in cytoplasmic translation.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanyl-tRNA aminoacylation","termid":"GO:0006419"},{"relation_name":"part_of","term_name":"cytoplasmic translation","termid":"GO:0002181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0010467","GO:0006520","GO:0006399","GO:0002181","GO:0008150"],"is_obsolete":false,"name":"cytoplasmic alanyl-tRNA aminoacylation","termid":"GO:1990762"}


id: FYPO:0003357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to filipin. Cells stop growing (and may die) at a concentration of filipin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to filipin","synonyms":[{"name":"hypersensitive to filipin","type":"exact"},{"name":"sensitive to filipin during mitotic cell cycle","type":"related"},{"name":"sensitive to filipin during vegetative growth","type":"exact"},{"name":"sensitivity to chemicals interfering with lipids","type":"broad"}],"termid":"FYPO:0003357"}


id: PBO:0087594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ASTRA complex, involved in chromatin remodeling; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1; involved in the cellular stress response; similar to S. pombe Tti2p; may interact with Rsm23p; GFP-fusion protein localizes to the cytoplasm","termid":"PBO:0087594"}


id: PBO:0064031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 65","termid":"PBO:0064031"}


id: GO:0002058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to uracil.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase binding","termid":"GO:0002061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"uracil binding","termid":"GO:0002058"}


id: PBO:0073852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member 3 pseudogene 2","termid":"PBO:0073852"}


id: PBO:0079978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 16","termid":"PBO:0079978"}


id: PBO:0044127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 13, pseudogene","termid":"PBO:0044127"}


id: GO:1901843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of high voltage-gated calcium channel activity.","definition_xrefs":["GOC:rl","PMID:12754254","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of voltage-gated calcium channel activity","termid":"GO:1901387"},{"relation_name":"is_a","term_name":"regulation of high voltage-gated calcium channel activity","termid":"GO:1901841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of high voltage-gated calcium channel activity","synonyms":[{"name":"activation of high voltage gated calcium channel activity","type":"exact"},{"name":"activation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"activation of high voltage-gated calcium channel activity","type":"narrow"},{"name":"positive regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"positive regulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"up regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"up regulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"up regulation of high voltage-gated calcium channel activity","type":"exact"},{"name":"up-regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"up-regulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"up-regulation of high voltage-gated calcium channel activity","type":"exact"},{"name":"upregulation of high voltage gated calcium channel activity","type":"exact"},{"name":"upregulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"upregulation of high voltage-gated calcium channel activity","type":"exact"}],"termid":"GO:1901843"}


id: MONDO:0005448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Liver injury resulting from hepatitis C infection.","definition_xrefs":["EFO:0005129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cirrhosis of liver","termid":"MONDO:0005155"},{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatitis C induced liver cirrhosis","secondary_identifiers":["MEDGEN:1674707","UMLS:C4763867"],"termid":"MONDO:0005448","xrefs":{"Monarch":{"xref_id":"0005448"}}}


id: MONDO:0015477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pinnae fistula or cyst is a rare otorhinolaryngological malformation characterized by the presence of a, usually unilateral, sinus tract or cyst located in the vicinity of the auricle (most frequently identified by a small pit near the anterior margin of the first ascending portion of the helix). Typically, patients are asymptomatic and usually only present symptoms (pain, erythema, discharge from pit) in relation to infection. Renal and inner ear anomalies may be associated.","definition_xrefs":["Orphanet:155838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pinnae fistula or cyst","secondary_identifiers":["GARD:19974","UMLS:C5680633","MEDGEN:1842452"],"termid":"MONDO:0015477","xrefs":{"Monarch":{"xref_id":"0015477"}}}


id: MONDO:0003764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from leptomeningeal melanocytes and occurs in childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pediatric meningioma","termid":"MONDO:0003057"},{"relation_name":"is_a","term_name":"leptomeningeal melanoma","termid":"MONDO:0003761"},{"relation_name":"is_a","term_name":"childhood malignant melanoma","termid":"MONDO:0042494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric leptomeningeal melanoma","secondary_identifiers":["UMLS:C1332976","MEDGEN:232061","NCIT:C5318","DOID:6089"],"synonyms":[{"name":"childhood leptomeningeal melanoma","type":"exact"},{"name":"childhood meningeal melanoma","type":"exact"},{"name":"paediatric meningeal melanoma","type":"exact"},{"name":"pediatric meningeal melanoma","type":"exact"}],"termid":"MONDO:0003764","xrefs":{"Monarch":{"xref_id":"0003764"}}}


id: SO:1000144
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variation whereby the duplicated sequences are carried as a free centric element.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_duplication","termid":"SO:1000037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free_duplication","synonyms":[{"name":"free duplication","type":"exact"}],"termid":"SO:1000144"}


id: PR:P79058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug134 gene.","definition_xrefs":["UniProtKB:P79058","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA stability protein mug134 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.16","synonyms":[{"name":"Spom972h-mug134","type":"exact"},{"name":"initiation of G zero protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79058"}


id: PBO:0017547
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by E. coli RusA","termid":"PBO:0017547"}


id: PBO:0075729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 9","termid":"PBO:0075729"}


id: MONDO:0018161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"non-hereditary retinoblastoma","secondary_identifiers":["GARD:17545","EFO:0005717","Orphanet:357034","MEDGEN:1842255","UMLS:C5680987"],"termid":"MONDO:0018161","xrefs":{"Monarch":{"xref_id":"0018161"}}}


id: MONDO:1010522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Frontonasal dysplasia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontonasal dysplasia, non-human animal","termid":"MONDO:1010036"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontonasal dysplasia, cattle","secondary_identifiers":["OMIA:002307-9913"],"termid":"MONDO:1010522","xrefs":{"Monarch":{"xref_id":"1010522"}}}


id: GO:0102613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,3,7-trimethyluric acid + O2 + NADH + 3 H+ = 1,3,7-trimethyl-5-hydroxyisourate + NAD + H2O.","definition_xrefs":["RHEA:48992","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trimethyluric acid monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-15454"],"termid":"GO:0102613"}


id: GO:0140751
data:
  {"annotated_genes":["SJAG_04755","SJAG_05313","SJAG_01878","SJAG_03982","SJAG_02698","SJAG_01938"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73769,70727,73311,80215,113608,72489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140750"}]},"cv_name":"molecular_function","definition":"A chromatin remodeler activity that slides core histone octamers along chromosomal DNA.","definition_xrefs":["PMID:10466730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent chromatin remodeler activity","termid":"GO:0140658"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01878":null,"SJAG_01938":null,"SJAG_02698":null,"SJAG_03982":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone octamer slider activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"histone octamer sliding activity","type":"exact"}],"termid":"GO:0140751","terms_by_termid":{"GO:0140750":null}}


id: GO:0070990
data:
  {"annotated_genes":["SJAG_03291","SJAG_02558","SJAG_04914","SJAG_02279"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70824,87774],"is_not":false,"summary":null,"term":"GO:0070990"},{"annotations":[70691,114160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990446"},{"annotations":[114161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990447"}]},"cv_name":"molecular_function","definition":"Binding to a small nuclear ribonucleoprotein particle.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02279":null,"SJAG_02558":null,"SJAG_03291":null,"SJAG_04914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"snRNP binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070990","terms_by_termid":{"GO:0070990":null,"GO:1990446":null,"GO:1990447":null}}


id: GO:0038136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals transmitted by a heterodimeric complex of the tyrosine kinase receptors ERBB3 and ERBB4. The pathway begins with binding of a ligand to either cell surface receptor, or the dimeric receptor complex, and ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:16460914","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB3 signaling pathway","termid":"GO:0038129"},{"relation_name":"is_a","term_name":"ERBB4 signaling pathway","termid":"GO:0038130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ERBB3-ERBB4 signaling pathway","synonyms":[{"name":"ERBB3-ERBB4 signalling pathway","type":"exact"},{"name":"HER3-HER4 signaling pathway","type":"exact"}],"termid":"GO:0038136"}


id: PBO:0050123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 33","termid":"PBO:0050123"}


id: GO:0031269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a pseudopodium by rearrangement of the actin cytoskeleton and overlying membrane.","definition_xrefs":["GOC:dph","GOC:mah","GOC:pg","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudopodium organization","termid":"GO:0031268"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"pseudopodium assembly","synonyms":[{"name":"pseudopodium extension","type":"exact"},{"name":"pseudopodium formation","type":"related"}],"termid":"GO:0031269"}


id: PBO:0051469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (I)-63 (pseudogene)","termid":"PBO:0051469"}


id: GO:1904447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of folic acid from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GO_REF:0000075","PMID:19762432","GOC:hal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"folate transmembrane transport","termid":"GO:0098838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"folate import across plasma membrane","synonyms":[{"name":"folate import into cell","type":"exact"},{"name":"folic acid import across plasma membrane","type":"related"}],"termid":"GO:1904447"}


id: PBO:0067287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 370, pseudogene","termid":"PBO:0067287"}


id: MONDO:0000980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A atherosclerosis that involves the aorta.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atherosclerosis","termid":"MONDO:0005311"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic atherosclerosis","secondary_identifiers":["MEDGEN:510061","HP:0012397","DOID:10230","UMLS:C0155733","SCTID:81817003","ICD9:440.0"],"synonyms":[{"name":"aorta atherosclerosis","type":"exact"},{"name":"aortic atherosclerosis","type":"exact"},{"name":"aortic atherosclerosis (disease)","type":"exact"},{"name":"atherosclerosis of aorta","type":"exact"}],"termid":"MONDO:0000980","xrefs":{"Monarch":{"xref_id":"0000980"}}}


id: MONDO:0015716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Moderately severe hemophilia B is a form of hemophilia B characterized by factor IX deficiency leading to abnormal bleeding as a result of minor injuries, or following surgery or tooth extraction.","definition_xrefs":["Orphanet:169796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia B","termid":"MONDO:0010604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"moderately severe hemophilia B","secondary_identifiers":["MEDGEN:1842225","UMLS:C5679575","GARD:17057"],"synonyms":[{"name":"moderately severe factor IX deficiency","type":"exact"},{"name":"moderately severe haemophilia type B","type":"exact"},{"name":"moderately severe hemophilia type B","type":"exact"}],"termid":"MONDO:0015716","xrefs":{"Monarch":{"xref_id":"0015716"}}}


id: MONDO:0017124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Noma is a gangrenous disease that causes severe destruction of the soft and osseous tissues of the face.","definition_xrefs":["Orphanet:2700"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"canker sore","termid":"MONDO:0005318"},{"relation_name":"is_a","term_name":"ulcerative stomatitis","termid":"MONDO:0004848"},{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"noma","secondary_identifiers":["MEDGEN:10366","EFO:1001063","MedDRA:10029502","SCTID:18116006","DOID:9672","GARD:4001","MESH:D009625","icd11.foundation:340823130","ICD9:528.1","NCIT:C34852","UMLS:C0028271"],"synonyms":[{"name":"cancrum oris","type":"exact"},{"name":"gangrenous stomatitis","type":"exact"},{"name":"noma neonatorum","type":"related"},{"name":"oral gangrene","type":"related"},{"name":"oro-facial gangrene","type":"related"},{"name":"oro-facial noma","type":"related"}],"termid":"MONDO:0017124","xrefs":{"Monarch":{"xref_id":"0017124"}}}


id: PBO:0083069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrouridine synthase; member of a widespread family of conserved proteins including Smm1p, Dus1p, and Dus4p; contains a consensus oleate response element (ORE) in its promoter region; forms nuclear foci upon DNA replication stress","termid":"PBO:0083069"}


id: PBO:0082305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartate kinase (L-aspartate 4-P-transferase); cytoplasmic enzyme that catalyzes the first step in the common pathway for methionine and threonine biosynthesis; expression regulated by Gcn4p and the general control of amino acid synthesis","termid":"PBO:0082305"}


id: PBO:0064993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRCP pseudogene 1","termid":"PBO:0064993"}


id: GO:0060650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mammary gland bud epithelial cells, resulting in the elongation of the bud.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary gland epithelial cell proliferation","termid":"GO:0033598"},{"relation_name":"part_of","term_name":"mammary gland bud elongation","termid":"GO:0060649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in mammary gland bud elongation","termid":"GO:0060650"}


id: PBO:0044090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A10","termid":"PBO:0044090"}


id: MOD:00601
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively produces an heterocyclic amino acid with a covalent bond between the side chain and either its alpha amino or 1-carboxyl group, possibly breaking the peptide chain.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclized residue","synonyms":[{"name":"CycRes","type":"exact"}],"termid":"MOD:00601"}


id: FYPO:0007080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initial release of duplicated spindle pole bodies that begins with the nucleation of microtubules from each SPB within the nucleus, and occurs as part of the first meiotic nuclear division, is abnormal.","definition_xrefs":["PMID:31532702","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"},{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal initial meiotic spindle pole body separation in meiosis I","synonyms":[{"name":"abnormal initial meiotic spindle pole body separation in first meiotic nuclear division","type":"exact"},{"name":"abnormal initial mitotic SPB separation in meiosis I","type":"exact"}],"termid":"FYPO:0007080"}


id: GO:0007585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory gaseous exchange by respiratory system","synonyms":[{"name":"breathing","type":"broad"},{"name":"respiration","type":"broad"}],"termid":"GO:0007585"}


id: SO:1000029
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An incomplete chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"deletion","termid":"SO:0000159"},{"relation_name":"is_a","term_name":"intrachromosomal_mutation","termid":"SO:1000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_deletion","secondary_identifiers":["http://en.wikipedia.org/wiki/Chromosomal_deletion"],"synonyms":[{"name":"(Drosophila)Df","type":"related"},{"name":"(bacteria)&ampDgr;","type":"related"},{"name":"(fungi)D","type":"related"},{"name":"chromosomal deletion","type":"exact"},{"name":"deficiency","type":"exact"}],"termid":"SO:1000029"}


id: PBO:0056553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 3","termid":"PBO:0056553"}


id: PBO:0061834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 2","termid":"PBO:0061834"}


id: MONDO:0600029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Decreased lung volume and inadequate ventilation due to parenchymal lung disorders (e.g., interstitial pulmonary fibrosis) or extrapulmonary disorders (e.g., scoliosis). Patients present with shortness of breath and cough.","definition_xrefs":["NCIT:C91762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restrictive pulmonary disease","secondary_identifiers":["MEDGEN:43209","SCTID:36485005","UMLS:C0085581"],"synonyms":[{"name":"Restrictive lung disease (disorder)","type":"exact"},{"name":"restrictive lung disease","type":"exact"}],"termid":"MONDO:0600029","xrefs":{"Monarch":{"xref_id":"0600029"}}}


id: PBO:0041137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"betacellulin","termid":"PBO:0041137"}


id: PBO:0056449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 3 pseudogene 1","termid":"PBO:0056449"}


id: SO:0001354
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_hydroxyuridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_hydroxyuridine","secondary_identifiers":["RNAMOD:060"],"synonyms":[{"name":"5-hydroxyuridine","type":"exact"},{"name":"five hydroxyuridine","type":"exact"},{"name":"ho5U","type":"exact"}],"termid":"SO:0001354"}


id: MONDO:0006568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kimura disease (obsolete MONDO:0006568)","termid":"MONDO:0006568","xrefs":{"Monarch":{"xref_id":"0006568"}}}


id: GO:0005658
data:
  {"annotated_genes":["SJAG_04994","SJAG_05239","SJAG_02627","SJAG_02172"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70764,73205,75355,75648],"is_not":false,"summary":null,"term":"GO:0005658"}]},"cv_name":"cellular_component","definition":"A complex of four polypeptides, comprising large and small DNA polymerase alpha subunits and two primase subunits, which are capable of catalyzing the synthesis of an RNA primer on the lagging strand of replicating DNA and the subsequent synthesis of a small stretch of DNA. The smaller of the two primase subunits alone can catalyze oligoribonucleotide synthesis.","definition_xrefs":["GOC:mah","PMID:11395402","PMID:26975377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase complex","termid":"GO:0042575"},{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"},{"relation_name":"part_of","term_name":"nuclear replisome","termid":"GO:0043601"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02172":null,"SJAG_02627":null,"SJAG_04994":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"alpha DNA polymerase:primase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"DNA polymerase alpha:primase complex","type":"exact"},{"name":"heterotetrameric polymerase alpha holoenzyme","type":"exact"},{"name":"pol-prim","type":"related"},{"name":"primosome","type":"broad"}],"termid":"GO:0005658","terms_by_termid":{"GO:0005658":null}}


id: MONDO:0017080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated encephalocele","termid":"MONDO:0016057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"occipital encephalocele","secondary_identifiers":["icd11.foundation:1075031814","UMLS:C0014067","GARD:20969","MEDGEN:4935","Orphanet:268823","ICD10CM:Q01.2","SCTID:42376006"],"termid":"MONDO:0017080","xrefs":{"Monarch":{"xref_id":"0017080"}}}


id: GO:1900826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane depolarization during a cardiac muscle cell action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization during cardiac muscle cell action potential","termid":"GO:1900825"},{"relation_name":"is_a","term_name":"negative regulation of membrane depolarization","termid":"GO:1904180"},{"relation_name":"negatively_regulates","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane depolarization during cardiac muscle cell action potential","synonyms":[{"name":"down regulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of membrane depolarization during of cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of membrane depolarization during cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:1900826"}


id: MONDO:0008349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonic stenosis, atrial septal defect, and unique electrocardiographic abnormalities","secondary_identifiers":["MESH:C566733","MEDGEN:357274","OMIM:178650","UMLS:C1867407"],"synonyms":[{"name":"Ciuffo syndrome","type":"related"},{"name":"pulmonic stenosis, atrial septal defect, and unique electrocardiographic abnormalities","type":"exact"}],"termid":"MONDO:0008349","xrefs":{"Monarch":{"xref_id":"0008349"}}}


id: PBO:0111529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 9","termid":"PBO:0111529"}


id: MONDO:0016000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypoparathyroidism, familial isolated 1","termid":"MONDO:0007796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial isolated hypoparathyroidism due to impaired PTH secretion","secondary_identifiers":["Orphanet:189466","GARD:17088","MEDGEN:1843283","UMLS:C5680524"],"termid":"MONDO:0016000","xrefs":{"Monarch":{"xref_id":"0016000"}}}


id: PBO:0085617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in early stages of meiotic recombination; involved in coordination between the initiation of recombination and the first division of meiosis; part of a complex (Rec107p-Mei4p-Rec114p) required for ds break formation","termid":"PBO:0085617"}


id: FYPO:0008117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which de novo assembly of the SAGA complex is abnormal.","definition_xrefs":["PMID:31748520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal de novo SAGA complex assembly","termid":"FYPO:0008117"}


id: MONDO:0007714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete migraine, familial hemiplegic, 1 (obsolete MONDO:0007714)","termid":"MONDO:0007714","xrefs":{"Monarch":{"xref_id":"0007714"}}}


id: MONDO:0016082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tracheo-esophageal fistula-hypospadias syndrome (obsolete MONDO:0016082)","secondary_identifiers":["Orphanet:2042"],"termid":"MONDO:0016082","xrefs":{"Monarch":{"xref_id":"0016082"}}}


id: FYPO:0005836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cell tip does not occur. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during vegetative growth","termid":"FYPO:0001585"},{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule to cell tip during vegetative growth","termid":"FYPO:0005831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein transport along microtubule to cell tip during vegetative growth","synonyms":[{"name":"abolished protein movement along microtubule to cell tip during vegetative growth","type":"exact"},{"name":"abolished protein transport during mitotic cell cycle","type":"related"},{"name":"protein transport along microtubule to cell tip abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0005836"}


id: GO:0046552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a photoreceptor cell. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell fate commitment","termid":"GO:0046552"}


id: PBO:0078935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 3-1","termid":"PBO:0078935"}


id: PBO:0042508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 2","termid":"PBO:0042508"}


id: PBO:0058916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12135","termid":"PBO:0058916"}


id: FYPO:0007242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell polarity phenotype in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) is abolished in both of the daughter cells formed as a result of the division of a mother cell in which NETO did not occur. Normally, growth begins at the old end and then becomes bipolar with similar timing in both daughter cells.","definition_xrefs":["PomBase:mah","PMID:31719163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal NETO in daughter cells","termid":"FYPO:0007240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0005568","FYPO:0001320"],"is_obsolete":false,"name":"abolished NETO in both daughter cells","synonyms":[{"name":"abolished NETO in both daughter cells during mitotic cell cycle","type":"related"},{"name":"abolished NETO in both daughter cells during vegetative growth","type":"exact"},{"name":"abolished activation of bipolar cell growth in both daughter cells","type":"related"},{"name":"abolished cell growth mode switching, monopolar to bipolar, in both daughter cells","type":"exact"},{"name":"abolished new end take-off in both daughter cells","type":"exact"},{"name":"abolished switch from monopolar to bipolar cell growth in both daughter cells","type":"exact"}],"termid":"FYPO:0007242"}


id: MONDO:0006395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the glandular epithelium of the rectal mucosa. It is characterized by tubular and villous architectural patterns. The neoplastic glandular cells have dysplastic features.","definition_xrefs":["NCIT:C5620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum adenoma","termid":"MONDO:0000530"},{"relation_name":"is_a","term_name":"colorectal tubulovillous adenoma","termid":"MONDO:0024662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal tubulovillous adenoma","secondary_identifiers":["SCTID:448428002","MEDGEN:277578","EFO:1000505","UMLS:C1335691"],"synonyms":[{"name":"Villotubular adenoma of rectum","type":"exact"},{"name":"Villotubular adenoma of the rectum","type":"exact"},{"name":"rectal Villotubular adenoma","type":"exact"},{"name":"rectal tubulovillous adenoma","type":"exact"},{"name":"tubulovillous adenoma of rectum","type":"exact"},{"name":"tubulovillous adenoma of the rectum","type":"exact"}],"termid":"MONDO:0006395","xrefs":{"Monarch":{"xref_id":"0006395"}}}


id: PR:O74312
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg9 gene.","definition_xrefs":["UniProtKB:O74312","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.07c","synonyms":[{"name":"Spom972h-atg9","type":"exact"}],"termid":"PR:O74312"}


id: PBO:0080084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 46","termid":"PBO:0080084"}


id: MONDO:0016340
data:
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id: MONDO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fungal infections caused by trichosporon that may become systemic especially in an immunocompromised host. Clinical manifestations range from superficial cutaneous infections to systemic lesions in multiple organs.","definition_xrefs":["MESH:D060586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic systemic mycosis","termid":"MONDO:0045033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichosporonosis","secondary_identifiers":["DOID:0050290","SCTID:240761008","MEDGEN:452453","UMLS:C0343939"],"synonyms":[{"name":"Trichosporon caused disease or disorder","type":"exact"},{"name":"Trichosporon disease or disorder","type":"exact"},{"name":"Trichosporon infectious disease","type":"exact"}],"termid":"MONDO:0000306","xrefs":{"Monarch":{"xref_id":"0000306"}}}


id: GO:0048695
data:
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id: GO:0048523
data:
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id: MONDO:0008555
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id: MONDO:0014109
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id: PBO:0089724
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id: PBO:0080523
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id: GO:0005458
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id: GO:0045347
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id: GO:0008167
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id: GO:0070560
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id: MONDO:0001907
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id: PBO:0001997
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id: GO:0008258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Movement of the anterior ectoderm to the interior of the embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"head involution","termid":"GO:0008258"}


id: PR:Q09822
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc15 gene.","definition_xrefs":["UniProtKB:Q09822","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.05c","synonyms":[{"name":"Spom972h-cdc15","type":"exact"}],"termid":"PR:Q09822"}


id: PBO:0056688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 9","termid":"PBO:0056688"}


id: GO:0001660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The heat generation process that results in a rise in body temperature above the normal, often as a response to infection.","definition_xrefs":["GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute-phase response","termid":"GO:0006953"},{"relation_name":"is_a","term_name":"heat generation","termid":"GO:0031649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fever generation","secondary_identifiers":["Wikipedia:Fever"],"synonyms":[{"name":"pyrexia","type":"broad"}],"termid":"GO:0001660"}


id: MONDO:0020786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short sleep, familial natural, 2 (obsolete MONDO:0020786)","secondary_identifiers":["OMIM:618591"],"synonyms":[{"name":"FNSS2","type":"related"},{"name":"SHORT SLEEP, FAMILIAL NATURAL, 2","type":"related"},{"name":"short sleep, familial natural, 2","type":"exact"}],"termid":"MONDO:0020786","xrefs":{"Monarch":{"xref_id":"0020786"}}}


id: PBO:0014236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase involved in ubiquitin-mediated protein degradation Cdc48","termid":"PBO:0014236"}


id: PBO:0014574
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosidase hydrolase family Thirty One","termid":"PBO:0014574"}


id: PBO:0080296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 60 pseudogene","termid":"PBO:0080296"}


id: PBO:0051195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-13 (non-functional)","termid":"PBO:0051195"}


id: MONDO:0013171
data:
  {"annotated_genes":["SJAG_01359"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86838],"is_not":false,"summary":null,"term":"MONDO:0013171"}]},"cv_name":"mondo","definition":"Purine nucleoside phosphorylase (PNP) deficiency is a disorder of purine metabolism characterized by progressive immunodeficiency leading to recurrent and opportunistic infections, autoimmunity and malignancy as well as neurologic manifestations.","definition_xrefs":["Orphanet:760"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"},{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01359":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"purine nucleoside phosphorylase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613179","UMLS:C0268125","NANDO:1200325","NCIT:C176817","SCTID:60743005","GARD:4606","MEDGEN:75653","DOID:5813","NCIT:C3963","MESH:C562587","ICD9:277.2","HGNC:7892","NANDO:2200698"],"synonyms":[{"name":"PNP deficiency","type":"exact"},{"name":"PNPase deficiency","type":"exact"},{"name":"deficiency of inosine phosphorylase","type":"exact"},{"name":"immunodeficiency due to purine nucleoside phosphorylase deficiency","type":"exact"},{"name":"nucleoside phosphorylase deficiency","type":"related"},{"name":"purine nucleoside phosphorylase deficiency","type":"exact"},{"name":"purine-nucleoside phosphorylase deficiency","type":"exact"}],"termid":"MONDO:0013171","terms_by_termid":{"MONDO:0013171":null},"xrefs":{"Monarch":{"xref_id":"0013171"}}}


id: GO:0031440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA 3'-end processing, any process involved in forming the mature 3' end of an mRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA processing","termid":"GO:0050684"},{"relation_name":"regulates","term_name":"mRNA 3'-end processing","termid":"GO:0031124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"regulation of mRNA 3'-end processing","termid":"GO:0031440"}


id: MONDO:1010258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glomerulonephritis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephritis, non-human animal","termid":"MONDO:1010259"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glomerulonephritis, non-human animal","secondary_identifiers":["OMIA:000413"],"termid":"MONDO:1010258","xrefs":{"Monarch":{"xref_id":"1010258"}}}


id: GO:0045500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to sevenless (sev; a receptor tyrosine kinase) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf","GOC:signaling","PMID:10771085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"part_of","term_name":"R7 cell fate commitment","termid":"GO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sevenless signaling pathway","synonyms":[{"name":"sev receptor signaling pathway","type":"exact"},{"name":"sev signaling pathway","type":"exact"},{"name":"sevenless signalling pathway","type":"exact"}],"termid":"GO:0045500"}


id: PBO:0063156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 2","termid":"PBO:0063156"}


id: PBO:0006175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_input","termid":"PBO:0006175"}


id: PBO:0011491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supeoxide dismutase mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0011491"}


id: PBO:0061667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP50 divergent transcript","termid":"PBO:0061667"}


id: PBO:0025430
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Survival Motor Neuron","termid":"PBO:0025430"}


id: GO:0033764
data:
  {"annotated_genes":["SJAG_02855","SJAG_03235"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000253"},{"annotations":[110393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000252"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP, and in which one substrate is a sterol derivative.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity","termid":"GO:0016229"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02855":null,"SJAG_03235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9758682"],"termid":"GO:0033764","terms_by_termid":{"GO:0000252":null,"GO:0000253":null}}


id: PBO:0047518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEZ family zinc finger 1","termid":"PBO:0047518"}


id: PBO:0064843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 12C","termid":"PBO:0064843"}


id: FYPO:0005132
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a lower extent than wild type following exposure to an enzymes that degrades cell wall polysaccharides.","definition_xrefs":["PMID:24623719","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spores sensitive to cell wall-degrading enzymes","synonyms":[{"name":"spores sensitive to glusulase","type":"narrow"}],"termid":"FYPO:0005132"}


id: MONDO:0018306
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87378,87377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008962"}]},"cv_name":"mondo","definition":"Griscelli syndrome (GS) is characterized by silvery gray sheen of the hair and hypopigmentation of the skin which can be associated to neurological impairment (type 1), immunodeficiency (type 2) or be isolated (type 3).","definition_xrefs":["Orphanet:381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic oculocutaneous albinism","termid":"MONDO:0017305"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"Griscelli syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0398794","ICD10CM:E70.3","DOID:0060831","ICD9:270.2","SCTID:37548006","MEDGEN:585090","NANDO:1200640","GARD:10913","OMIMPS:214450"],"synonyms":[{"name":"ChC)diak-Higashi-like syndrome","type":"exact"},{"name":"Chédiak-Higashi-like syndrome","type":"exact"},{"name":"Ch��diak-Higashi-like syndrome","type":"exact"},{"name":"Griscelli disease","type":"related"},{"name":"Griscelli-PruniC)ras syndrome","type":"exact"},{"name":"Griscelli-Pruniéras syndrome","type":"exact"},{"name":"Griscelli-Pruni��ras syndrome","type":"exact"},{"name":"partial albinism-immunodeficiency syndrome","type":"exact"}],"termid":"MONDO:0018306","terms_by_termid":{"MONDO:0008962":null},"xrefs":{"Monarch":{"xref_id":"0018306"}}}


id: PBO:0029644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_cell_with_fragmented_nucleus_and_increased_septum_thickness","termid":"PBO:0029644"}


id: PBO:0078177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-2","termid":"PBO:0078177"}


id: _global:causally_upstream_of_or_within,_positive_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of_or_within","termid":"_global:causally_upstream_of_or_within"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within,_positive_effect","secondary_identifiers":["RO:0004047"],"termid":"_global:causally_upstream_of_or_within,_positive_effect"}


id: FYPO:0008047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in meiosis in which dimethylation of lysine at position 4 of histone H3 is decreased at the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K4 dimethylation  at centromere during meiosis","termid":"FYPO:0008047"}


id: PBO:0031385
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_transcription_by_glucose","termid":"PBO:0031385"}


id: MONDO:0700236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the BBS9 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBS9-related ciliopathy","synonyms":[{"name":"BBS9-related ciliopathy","type":"exact"}],"termid":"MONDO:0700236","xrefs":{"Monarch":{"xref_id":"0700236"}}}


id: SO:0000250
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post_transcriptionally modified base.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base","termid":"SO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_RNA_base_feature","synonyms":[{"name":"modified RNA base feature","type":"exact"}],"termid":"SO:0000250"}


id: PBO:0048542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET1 pseudogene 1","termid":"PBO:0048542"}


id: PATO:0000864
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000864 spinal reflex value (obsolete PATO:0000864)","termid":"PATO:0000864"}


id: PBO:0028105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nuclear_periphery","termid":"PBO:0028105"}


id: MONDO:0020251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare strabismus and restriction syndrome (obsolete MONDO:0020251)","secondary_identifiers":["Orphanet:98681"],"termid":"MONDO:0020251","xrefs":{"Monarch":{"xref_id":"0020251"}}}


id: MONDO:0010355
data:
  {"annotated_genes":["SJAG_03635","SJAG_03286","SJAG_01465"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87406,87407,87408],"is_not":false,"summary":null,"term":"MONDO:0010355"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability Claes-Jensen type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:300534","MEDGEN:335139","SCTID:719161008","MESH:C564494","UMLS:C1845243","Orphanet:85279","GARD:16744","DOID:0060809"],"synonyms":[{"name":"MRXSCJ","type":"exact"},{"name":"MRXSJ","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic, Claes-Jensen type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Claes-Jensen type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, JARID1C-related","type":"related"},{"name":"mental retardation, X-linked, syndromic, Claes-Jensen type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, JARID1C-related","type":"related"},{"name":"syndromic X-linked intellectual disability Claes-Jensen type","type":"exact"},{"name":"syndromic X-linked intellectual disability JARID1C-related","type":"exact"},{"name":"syndromic X-linked intellectual disability due to JARID1C mutation","type":"exact"},{"name":"syndromic X-linked mental retardation JARID1C-related","type":"exact"}],"termid":"MONDO:0010355","terms_by_termid":{"MONDO:0010355":null},"xrefs":{"Monarch":{"xref_id":"0010355"}}}


id: MONDO:0014055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign adult familial myoclonic epilepsy","termid":"MONDO:0019448"},{"relation_name":"is_a","term_name":"epilepsy, familial adult myoclonic","termid":"MONDO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial adult myoclonic, 4","secondary_identifiers":["GARD:18085","MEDGEN:767474","DOID:0111693","OMIM:615127","UMLS:C3554560"],"synonyms":[{"name":"FAME4","type":"exact"},{"name":"cortical myoclonic tremor with epilepsy, familial, 4","type":"related"},{"name":"epilepsy, familial ADULT myoclonic, 4","type":"related"},{"name":"epilepsy, myoclonic, familial adult, 4","type":"exact"}],"termid":"MONDO:0014055","xrefs":{"Monarch":{"xref_id":"0014055"}}}


id: GO:0006921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The breakdown of structures such as organelles, proteins, or other macromolecular structures during apoptosis.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"part_of","term_name":"execution phase of apoptosis","termid":"GO:0097194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular component disassembly involved in execution phase of apoptosis","synonyms":[{"name":"cellular component disassembly involved in apoptosis","type":"narrow"},{"name":"cellular component disassembly involved in apoptotic process","type":"broad"},{"name":"disassembly of cell structures","type":"broad"}],"termid":"GO:0006921"}


id: MONDO:0009991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Rh deficiency syndrome (obsolete MONDO:0009991)","termid":"MONDO:0009991","xrefs":{"Monarch":{"xref_id":"0009991"}}}


id: PR:O74907
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BRCA2 and CDKN1A-interacting protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04180","PANTHER:PTHR13261:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bcp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.08","secondary_identifiers":["UniProtKB:O74907"],"synonyms":[{"name":"Spom972h-BCCIP","type":"exact"}],"termid":"PR:O74907"}


id: GO:0033591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an L-ascorbic acid (vitamin C) stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to monosaccharide","termid":"GO:0034284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-ascorbic acid","synonyms":[{"name":"response to L-ascorbate","type":"exact"},{"name":"response to ascorbic acid","type":"broad"},{"name":"response to vitamin C","type":"exact"}],"termid":"GO:0033591"}


id: MONDO:0020638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of melanoma that typically occurs in light-skinned individuals ranging in age from young adults to the elderly. Risk factors include extensive sun exposure during childhood, a family history of melanoma, and the presence of dysplastic nevi.","definition_xrefs":["NCIT:C9152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous melanoma","termid":"MONDO:0005012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"superficial spreading melanoma","secondary_identifiers":["SCTID:254730000","UMLS:C0334438","ICDO:8743/3","icd11.foundation:208661037","MEDGEN:87242"],"synonyms":[{"name":"SSM","type":"exact"},{"name":"cutaneous superficial spreading melanoma","type":"exact"},{"name":"pagetoid melanoma","type":"exact"},{"name":"superficial spreading cutaneous (skin) melanoma","type":"exact"},{"name":"superficial spreading malignant melanoma of skin","type":"exact"},{"name":"superficial spreading malignant melanoma of the skin","type":"exact"},{"name":"superficial spreading malignant skin melanoma","type":"exact"},{"name":"superficial spreading melanoma","type":"exact"},{"name":"superficial spreading melanoma of skin","type":"exact"},{"name":"superficial spreading melanoma of the skin","type":"exact"}],"termid":"MONDO:0020638","xrefs":{"Monarch":{"xref_id":"0020638"}}}


id: PBO:0053357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 261","termid":"PBO:0053357"}


id: MONDO:0014939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the SLC5A7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital myasthenic syndrome 20","secondary_identifiers":["GARD:16202","UMLS:C4310694","MEDGEN:934661","OMIM:617143","DOID:0110661"],"synonyms":[{"name":"CMS20","type":"exact"},{"name":"SLC5A7 congenital myasthenic syndrome","type":"exact"},{"name":"congenital myasthenic syndrome 20 presynaptic","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in SLC5A7","type":"exact"},{"name":"congenital myasthenic syndrome type 20","type":"exact"},{"name":"myasthenic syndrome, congenital, 20, presynaptic","type":"exact"}],"termid":"MONDO:0014939","xrefs":{"Monarch":{"xref_id":"0014939"}}}


id: GO:0075114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or disrupts a transmembrane receptor-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host transmembrane receptor-mediated signal transduction (obsolete GO:0075114)","synonyms":[{"name":"disruption of host transmembrane receptor-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host transmembrane receptor-mediated signal transduction","type":"exact"},{"name":"suppression by symbiont of host transmembrane receptor-mediated signal transduction","type":"exact"}],"termid":"GO:0075114"}


id: GO:0023069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the xylem.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via xylem (obsolete GO:0023069)","synonyms":[{"name":"signal transmission via xylem","type":"exact"}],"termid":"GO:0023069"}


id: MONDO:0003567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral hypoactive labyrinth","secondary_identifiers":["MEDGEN:510004","ICD9:386.54","SCTID:194375009","UMLS:C0155518","DOID:565"],"synonyms":[{"name":"hypoactive bilateral labyrinthine dysfunction","type":"exact"},{"name":"hypoactive labyrinth, bilateral","type":"exact"}],"termid":"MONDO:0003567","xrefs":{"Monarch":{"xref_id":"0003567"}}}


id: FYPO:0002389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric heterochromatin","termid":"FYPO:0008154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to heterochromatin at centromere outer repeat","secondary_identifiers":["FYPO:0005081"],"synonyms":[{"name":"normal protein localisation to chromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localization at centromere otr","type":"exact"},{"name":"normal protein localization at centromeric outer repeat region","type":"exact"},{"name":"normal protein localization at pericentric region","type":"related"},{"name":"normal protein localization at pericentromeric region","type":"related"},{"name":"normal protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"normal protein localization to chromatin at centromere otr","type":"exact"},{"name":"normal protein localization to chromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localization to chromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at centromeric outer repeat","type":"exact"},{"name":"normal protein localization to chromatin at pericentric region","type":"related"},{"name":"normal protein localization to chromatin at pericentromeric region","type":"related"},{"name":"normal protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002389"}


id: PBO:0027945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_with_fragmented_septum_and_more_than_four_nuclei","termid":"PBO:0027945"}


id: GO:0018700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-chloro-N-isopropylacetanilide + H+ + 2 e- = Cl- + N-isopropylacetanilide.","definition_xrefs":["UM-BBD_reactionID:r0719"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-chloro-N-isopropylacetanilide reductive dehalogenase activity (obsolete GO:0018700)","termid":"GO:0018700"}


id: PBO:0090530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit E","termid":"PBO:0090530"}


id: GO:0080041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-ribose + H2O = AMP + ribose-1-phosphate.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-sugar diphosphatase activity","termid":"GO:0019144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ADP-ribose pyrophosphohydrolase activity","termid":"GO:0080041"}


id: PBO:0060397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 binding protein 2 like 1","termid":"PBO:0060397"}


id: PBO:0066792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 91","termid":"PBO:0066792"}


id: MONDO:0006615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the sweat gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sweat gland disorder","secondary_identifiers":["MEDGEN:892310","SCTID:88232005","ICD9:705.89","UMLS:C0262643","ICD9:705","ICD9:705.9","DOID:1383","MESH:D013543"],"synonyms":[{"name":"disease of sweat gland","type":"exact"},{"name":"disease of sweat glands","type":"related"},{"name":"disease or disorder of sweat gland","type":"exact"},{"name":"disorder of sweat gland","type":"exact"},{"name":"disorder of sweat glands","type":"related"},{"name":"sweat gland disease","type":"exact"},{"name":"sweat gland disease or disorder","type":"exact"}],"termid":"MONDO:0006615","xrefs":{"Monarch":{"xref_id":"0006615"}}}


id: MONDO:0014036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Alzheimer's disease that is characterized by an associated with mutations in the gene TREM2.","definition_xrefs":["PMID:23150934","DOID:0110049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease","termid":"MONDO:0004975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"Alzheimer disease 17","secondary_identifiers":["UMLS:C3554452","OMIM:615080","MEDGEN:767366"],"synonyms":[{"name":"AD17","type":"exact"},{"name":"Alzheimer disease 17","type":"exact"},{"name":"Alzheimer disease 17, late onset","type":"exact"},{"name":"Alzheimer disease 17, late-onset","type":"related"},{"name":"Alzheimer's disease 17","type":"exact"},{"name":"Alzheimer's disease type 17","type":"exact"}],"termid":"MONDO:0014036","xrefs":{"Monarch":{"xref_id":"0014036"}}}


id: FYPO:0007905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which beta-glucan biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glucan synthesis","termid":"FYPO:0007904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal beta-glucan synthesis","synonyms":[{"name":"abnormal beta-glucan biosynthetic process","type":"exact"}],"termid":"FYPO:0007905"}


id: FYPO:0001954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of calcium ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal calcium import","termid":"FYPO:0001953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased calcium import","synonyms":[{"name":"decreased calcium import during mitotic cell cycle","type":"related"},{"name":"decreased calcium import during vegetative growth","type":"exact"},{"name":"decreased calcium import into cell","type":"exact"},{"name":"decreased calcium ion import","type":"exact"},{"name":"decreased calcium ion import across plasma membrane","type":"exact"},{"name":"decreased calcium uptake","type":"exact"},{"name":"decreased calcium uptake into intracellular compartments","type":"related"},{"name":"decreased cellular calcium import","type":"exact"},{"name":"reduced calcium import","type":"exact"}],"termid":"FYPO:0001954"}


id: GO:0001769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed orientation of B cell signaling molecules and associated membrane rafts towards a chemokine gradient of a contact point with an antigen displaying cell.","definition_xrefs":["GOC:mgi_curators","PMID:12615889","PMID:9692889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of lymphocyte polarity","termid":"GO:0001767"},{"relation_name":"part_of","term_name":"B cell activation","termid":"GO:0042113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of B cell polarity","synonyms":[{"name":"B cell polarization","type":"exact"},{"name":"B lymphocyte polarization","type":"exact"},{"name":"B-cell polarization","type":"exact"},{"name":"establishment of B lymphocyte polarity","type":"exact"},{"name":"establishment of B-cell polarity","type":"exact"},{"name":"establishment of B-lymphocyte polarity","type":"exact"}],"termid":"GO:0001769"}


id: MONDO:1012412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 polysaccharide storage myopathy, non-human animal","termid":"MONDO:1011801"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 polysaccharide storage myopathy, horse","secondary_identifiers":["OMIA:001537-9796"],"termid":"MONDO:1012412","xrefs":{"Monarch":{"xref_id":"1012412"}}}


id: PBO:0066464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 2","termid":"PBO:0066464"}


id: GO:0060038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a cardiac muscle cell population by cell division.","definition_xrefs":["GOC:rph","PMID:11161571","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle cell proliferation","termid":"GO:0014855"},{"relation_name":"part_of","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell proliferation","synonyms":[{"name":"cardiac myocyte proliferation","type":"exact"},{"name":"cardiomyocyte proliferation","type":"related"},{"name":"heart muscle cell proliferation","type":"exact"}],"termid":"GO:0060038"}


id: PBO:0083314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF DAL7/YIR031C","termid":"PBO:0083314"}


id: FYPO:0003894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to rotenone. Cells stop growing (and may die) at a concentration of rotenone that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to rotenone","synonyms":[{"name":"hypersensitive to rotenone","type":"exact"},{"name":"sensitive to rotenone during mitotic cell cycle","type":"related"},{"name":"sensitive to rotenone during vegetative growth","type":"exact"}],"termid":"FYPO:0003894"}


id: PBO:0055080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2498","termid":"PBO:0055080"}


id: PBO:0090162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex subunit Rpa34","termid":"PBO:0090162"}


id: PATO:0002317
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex quadrilateral is a parallelogram if and only if any one of the following statements are true:\\n1. Each diagonal divides the quadrilateral into two congruent triangles with the same orientation.\\n2. The opposite sides are congruent in pairs.\\n3. The diagonals bisect each other.\\n4. The opposite angles are congruent in pairs.\\n5. The sum of the squares of the sides equals the sum of the squares of the diagonals. (This is the parallelogram law)\\n6.It possesses rotational symmetry.\\n7.One pair of opposite sides are parallel and congruent.\\n8.Two pairs of adjacent angles are supplementary.","definition_xrefs":["wikipedia:Parallelogram"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quadrangular","termid":"PATO:0001988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parallelogram","termid":"PATO:0002317"}


id: MONDO:0100131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute respiratory distress syndromet that occurs in pediatric patients and includes findings of new infiltrates (unilateral or bilateral) consistent with acute parenchymal disease, edema not fully explained by fluid overload or cardiac failure, and may present as new acute lung disease in setting of chronic lung disease and/or heart disease, and perinatal lung disease is excluded.","definition_xrefs":["PMID:31236307","PMID:25647235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute respiratory distress syndrome","termid":"MONDO:0006502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pediatric acute respiratory distress syndrome","synonyms":[{"name":"PARDS","type":"exact"}],"termid":"MONDO:0100131","xrefs":{"Monarch":{"xref_id":"0100131"}}}


id: GO:1900241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phenotypic switching.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of phenotypic switching","termid":"GO:1900239"},{"relation_name":"positively_regulates","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phenotypic switching","synonyms":[{"name":"activation of phenotypic dimorphism","type":"related"},{"name":"activation of phenotypic switching","type":"narrow"},{"name":"positive regulation of phenotypic dimorphism","type":"related"},{"name":"up regulation of phenotypic dimorphism","type":"related"},{"name":"up regulation of phenotypic switching","type":"exact"},{"name":"up-regulation of phenotypic dimorphism","type":"related"},{"name":"up-regulation of phenotypic switching","type":"exact"},{"name":"upregulation of phenotypic dimorphism","type":"related"},{"name":"upregulation of phenotypic switching","type":"exact"}],"termid":"GO:1900241"}


id: MONDO:0056815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma that arises from the intrahepatic bile ducts and is composed of malignant glandular cells and malignant squamous cells.","definition_xrefs":["NCIT:C118630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"liver adenosquamous carcinoma","secondary_identifiers":["UMLS:C3898586","MEDGEN:858180"],"synonyms":[{"name":"liver adenosquamous cancer","type":"exact"},{"name":"liver adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0056815","xrefs":{"Monarch":{"xref_id":"0056815"}}}


id: PBO:0085605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in control of cell wall structure and stress response; direct inhibitor of the nuclear Dbf2 related (NDR) kinase Cbk1p-Mob2p; overproduction confers resistance to cell-wall degrading enzymes; exhibits genetic interactions with genes involved in the cell wall integrity pathway; LRE1 has a paralog, HLR1, that arose from the whole genome duplication","termid":"PBO:0085605"}


id: GO:0045632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mechanoreceptor differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mechanoreceptor differentiation","termid":"GO:0045631"},{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"negatively_regulates","term_name":"mechanoreceptor differentiation","termid":"GO:0042490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mechanoreceptor differentiation","synonyms":[{"name":"down regulation of mechanoreceptor differentiation","type":"exact"},{"name":"down-regulation of mechanoreceptor differentiation","type":"exact"},{"name":"downregulation of mechanoreceptor differentiation","type":"exact"},{"name":"inhibition of mechanoreceptor differentiation","type":"narrow"}],"termid":"GO:0045632"}


id: PBO:0003036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine racemase Alr2 (predicted)","termid":"PBO:0003036"}


id: FYECO:0000234
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sulfite was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ sulfite","termid":"FYECO:0000234"}


id: PR:Q9HGL8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl4301 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGL8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L43-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.04c","synonyms":[{"name":"L37A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl4301","type":"exact"}],"termid":"PR:Q9HGL8"}


id: GO:0070566
data:
  {"annotated_genes":["SJAG_01352","SJAG_02370","SJAG_04946","SJAG_02383","SJAG_02288","SJAG_01176","SJAG_02725","SJAG_02720","SJAG_00797","SJAG_01704","SJAG_01500","SJAG_03896","SJAG_02889","SJAG_03257","SJAG_01937","SJAG_03475"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62273],"is_not":false,"summary":null,"term":"GO:0070566"},{"annotations":[75286,70626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052929"},{"annotations":[97338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141192"},{"annotations":[78938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003919"},{"annotations":[71034,75099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000309"},{"annotations":[75101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004515"},{"annotations":[76726,96587,59203,64111,69260,78570,79358,69395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990817"},{"annotations":[66977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004781"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an adenylyl group to an acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_01176":null,"SJAG_01352":null,"SJAG_01500":null,"SJAG_01704":null,"SJAG_01937":null,"SJAG_02288":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02720":null,"SJAG_02725":null,"SJAG_02889":null,"SJAG_03257":null,"SJAG_03475":null,"SJAG_03896":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070566","terms_by_termid":{"GO:0000309":null,"GO:0003919":null,"GO:0004515":null,"GO:0004781":null,"GO:0052929":null,"GO:0070566":null,"GO:0141192":null,"GO:1990817":null}}


id: GO:0090515
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104147],"is_not":false,"summary":null,"term":"GO:0090515"}]},"cv_name":"biological_process","definition":"The directed movement of L-glutamate into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate transmembrane transport","termid":"GO:0015813"},{"relation_name":"is_a","term_name":"glutamate transmembrane import into vacuole","termid":"GO:0090454"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-glutamate transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090515","terms_by_termid":{"GO:0090515":null}}


id: PBO:0027007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ascospore_wall_thickness","termid":"PBO:0027007"}


id: GO:0005318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphate:hydrogen symporter (obsolete GO:0005318)","synonyms":[{"name":"phosphate:hydrogen symporter","type":"exact"},{"name":"phosphate:proton symporter activity","type":"exact"}],"termid":"GO:0005318"}


id: GO:0004747
data:
  {"annotated_genes":["SJAG_03174"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58622],"is_not":false,"summary":null,"term":"GO:0004747"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-ribose = ADP + D-ribose 5-phosphate.","definition_xrefs":["EC:2.7.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"ribokinase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["RHEA:13697","Reactome:R-HSA-8955844","MetaCyc:RIBOKIN-RXN"],"synonyms":[{"name":"ATP:D-ribose 5-phosphotransferase activity","type":"related"},{"name":"D-ribokinase activity","type":"related"},{"name":"deoxyribokinase activity","type":"related"},{"name":"ribokinase (phosphorylating)","type":"related"}],"termid":"GO:0004747","terms_by_termid":{"GO:0004747":null}}


id: MOD:00065
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-acetyl-L-cysteine.","definition_xrefs":["PubMed:1310545","PubMed:14730666","PubMed:11857757","PubMed:11999733","PubMed:12175151","PubMed:15350136","RESID:AA0056","Unimod:1#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetylated residue","termid":"MOD:00645"},{"relation_name":"is_a","term_name":"acetylated L-cysteine","termid":"MOD:00646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-acetyl-L-cysteine","synonyms":[{"name":"(2R)-3-acetylsulfanyl-2-aminopropanoic acid","type":"exact"},{"name":"2-amino-3-(acetylthio)propanoic acid","type":"exact"},{"name":"2-azanyl-3-(acetylsulfanyl)propanoic acid","type":"exact"},{"name":"ACT_SITE S-acetylcysteine intermediate","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"Acetylation","type":"related"},{"name":"S-acetyl-L-cysteine","type":"exact"},{"name":"S-acetylcysteine","type":"exact"},{"name":"SAcCys","type":"exact"},{"name":"cysteine acetate thioester","type":"exact"}],"termid":"MOD:00065"}


id: _global:increased_in_presence_of
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a substance, where the modification is present to a greater extent in the presence than in the absence of the substance.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_in_presence_of","termid":"_global:increased_in_presence_of"}


id: GO:0022032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of telencephalon oligodendrocyte cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon glial cell migration","termid":"GO:0022030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon oligodendrocyte cell migration","termid":"GO:0022032"}


id: PBO:0028830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_localization","termid":"PBO:0028830"}


id: PR:Q9UUB3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUB3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.11","synonyms":[{"name":"Spom972h-meu18","type":"exact"}],"termid":"PR:Q9UUB3"}


id: PBO:0039699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis inhibitor 5","termid":"PBO:0039699"}


id: MONDO:0018346
data:
  {"annotated_genes":["SJAG_04881"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86323],"is_not":false,"summary":null,"term":"MONDO:0018346"}]},"cv_name":"mondo","definition":"Ferro-cerebro-cutaneous syndrome is a rare, genetic, metabolic liver disease characterized by progressive neurodegeneration, cutaneous abnormalities, including varying degrees of ichthyosis or seborrheic dermatitis, and systemic iron overload. Patients manifest with infantile-onset seizures, encephalopathy, abnormal eye movements, axial hypotonia with peripheral hypertonia, brisk reflexes, cortical blindness and deafness, myoclonus and hepato/splenomegaly, as well as oral manifestations, including microdontia, widely spaced and pointed teeth with delayed eruption, and gingival overgrowth.","definition_xrefs":["Orphanet:397922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"ferro-cerebro-cutaneous syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:301072","GARD:21637","MEDGEN:1658844","UMLS:C4751570"],"synonyms":[{"name":"FCCS","type":"exact"},{"name":"cerebro-cutaneous syndrome with iron overload","type":"exact"}],"termid":"MONDO:0018346","terms_by_termid":{"MONDO:0018346":null},"xrefs":{"Monarch":{"xref_id":"0018346"}}}


id: PBO:0087099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal lysine methyltransferase; specific for monomethylation of Rpl42ap and Rpl42bp (lysine 55); nuclear SET-domain containing protein","termid":"PBO:0087099"}


id: PBO:0050207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 24","termid":"PBO:0050207"}


id: MONDO:1012744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant cystinuria that occurs in dogs due to a mutation in the SLC3A1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"},{"relation_name":"is_a","term_name":"cystinuria, non-human animal","termid":"MONDO:1012968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant cystinuria, SLC3A1-related, dog","secondary_identifiers":["OMIA:001879-9615"],"synonyms":[{"name":"cystinuria, type II - A, dog","type":"related"}],"termid":"MONDO:1012744","xrefs":{"Monarch":{"xref_id":"1012744"}}}


id: GO:0007442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hindgut are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"digestive tract morphogenesis","termid":"GO:0048546"},{"relation_name":"part_of","term_name":"hindgut development","termid":"GO:0061525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindgut morphogenesis","termid":"GO:0007442"}


id: MONDO:0007005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the rectum and the distal portion of the colon.","definition_xrefs":["MESH:D011350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"ulcerative proctosigmoiditis","secondary_identifiers":["EFO:1001223","ICD9:556.3","MEDGEN:540639","UMLS:C0267390","SCTID:52506002"],"termid":"MONDO:0007005","xrefs":{"Monarch":{"xref_id":"0007005"}}}


id: PBO:0002881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein Pex22 (predicted)","termid":"PBO:0002881"}


id: PBO:0056644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 5","termid":"PBO:0056644"}


id: FYPO:0006395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in heterochromatin at subtelomeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0003223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K9 acetylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"normal histone H3-K9 acetylation at subtelomere during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 acetylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"normal histone H3K9 acetylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006395"}


id: PBO:0074094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 9","termid":"PBO:0074094"}


id: PBO:0060426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAB1 pseudogene 1","termid":"PBO:0060426"}


id: GO:1902583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An intracellular transport which involves another organism.","definition_xrefs":["GO_REF:0000089","GOC:jl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism intracellular transport (obsolete GO:1902583)","synonyms":[{"name":"multi organism intracellular transport","type":"exact"}],"termid":"GO:1902583"}


id: MONDO:0003482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A infectious disease involving the Pediculus humanus corporis.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lice infestation","termid":"MONDO:0003472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Pediculus humanus corporis infestation","secondary_identifiers":["ICD9:132.1","DOID:5513","MEDGEN:508023","SCTID:25188002","UMLS:C0030758"],"synonyms":[{"name":"Pediculus corporis","type":"exact"},{"name":"Pediculus corporis [body louse]","type":"exact"},{"name":"Pediculus humanus corporis infection","type":"exact"},{"name":"Pediculus humanus infestation","type":"exact"},{"name":"body louse infestation","type":"exact"},{"name":"infections, Pediculus humanus corporis","type":"related"}],"termid":"MONDO:0003482","xrefs":{"Monarch":{"xref_id":"0003482"}}}


id: MONDO:0016166
data:
  {"annotated_genes":["SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[86021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"}]},"cv_name":"mondo","definition":"An instance of hyperparathyroidism that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperparathyroidism","termid":"MONDO:0001741"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01151":null},"genotype_count":0,"is_obsolete":false,"name":"hereditary hyperparathyroidism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:208596","MEDGEN:1843372","GARD:20408","OMIMPS:145000","UMLS:C5680826"],"synonyms":[{"name":"genetic hyperparathyroidism","type":"exact"}],"termid":"MONDO:0016166","terms_by_termid":{"MONDO:0007767":null,"MONDO:0007768":null},"xrefs":{"Monarch":{"xref_id":"0016166"}}}


id: PBO:0039327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 15-lipoxygenase type B","termid":"PBO:0039327"}


id: PBO:0057110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 199a-2","termid":"PBO:0057110"}


id: GO:1905928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of invadopodium disassembly.","definition_xrefs":["GO_REF:0000058","PMID:15684033","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of invadopodium disassembly (obsolete GO:1905928)","synonyms":[{"name":"down regulation of invadopodium disassembly","type":"exact"},{"name":"down-regulation of invadopodium disassembly","type":"exact"},{"name":"downregulation of invadopodium disassembly","type":"exact"},{"name":"inhibition of invadopodium disassembly","type":"narrow"}],"termid":"GO:1905928"}


id: GO:2000622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"},{"relation_name":"regulates","term_name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","termid":"GO:0000184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","synonyms":[{"name":"regulation of mRNA breakdown, nonsense-mediated decay","type":"exact"},{"name":"regulation of mRNA catabolic process, nonsense-mediated","type":"exact"},{"name":"regulation of mRNA catabolism, nonsense-mediated","type":"exact"},{"name":"regulation of mRNA degradation, nonsense-mediated decay","type":"exact"},{"name":"regulation of nonsense-mediated mRNA decay","type":"exact"},{"name":"regulation of nuclear mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"GO:2000622"}


id: MONDO:0016232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare venous malformation (obsolete MONDO:0016232)","secondary_identifiers":["Orphanet:211252"],"termid":"MONDO:0016232","xrefs":{"Monarch":{"xref_id":"0016232"}}}


id: MONDO:0011552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in an autosomal dominant mutation of SCZD10 on chromosome 15q15.","definition_xrefs":["DOID:0070086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 10","secondary_identifiers":["MEDGEN:107776","MESH:D012560","OMIM:605419","UMLS:C0543918"],"synonyms":[{"name":"SCZD10","type":"exact"},{"name":"catatonia, periodic","type":"related"},{"name":"schizophrenia 10","type":"exact"},{"name":"schizophrenia susceptibility locus, chromosome 15Q15-related","type":"related"}],"termid":"MONDO:0011552","xrefs":{"Monarch":{"xref_id":"0011552"}}}


id: MONDO:0017249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary airway malformation","termid":"MONDO:0016580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary airway malformation type 1","secondary_identifiers":["GARD:21094","MEDGEN:1760964","Orphanet:280832","UMLS:C5437763","icd11.foundation:1455719613"],"synonyms":[{"name":"CCAM type 1","type":"exact"},{"name":"CPAM type 1","type":"exact"},{"name":"congenital cystic adenomatoid malformation of the lung type 1","type":"exact"},{"name":"congenital cystic adenomatous malformation of the lung type 1","type":"exact"},{"name":"congenital cystic disease of the lung type 1","type":"exact"}],"termid":"MONDO:0017249","xrefs":{"Monarch":{"xref_id":"0017249"}}}


id: MONDO:0002409
data:
  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disease involving the auditory system.","direct_ancestors":[{"relation_name":"is_a","term_name":"human 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disease","type":"exact"}],"termid":"MONDO:0002409","terms_by_termid":{"MONDO:0007424":null,"MONDO:0009479":null,"MONDO:0010378":null,"MONDO:0010577":null,"MONDO:0010799":null,"MONDO:0010915":null,"MONDO:0010933":null,"MONDO:0011067":null,"MONDO:0011350":null,"MONDO:0011480":null,"MONDO:0011568":null,"MONDO:0012091":null,"MONDO:0012196":null,"MONDO:0013386":null,"MONDO:0013471":null,"MONDO:0013489":null,"MONDO:0014237":null,"MONDO:0014594":null,"MONDO:0014603":null,"MONDO:0014853":null,"MONDO:0027048":null,"MONDO:0030058":null,"MONDO:0030719":null,"MONDO:0032639":null,"MONDO:0032740":null,"MONDO:0032749":null,"MONDO:0032761":null,"MONDO:0032762":null,"MONDO:0032911":null,"MONDO:0032917":null,"MONDO:0033199":null,"MONDO:0033258":null,"MONDO:0033668":null,"MONDO:0859524":null,"MONDO:0859525":null,"MONDO:0958277":null},"xrefs":{"Monarch":{"xref_id":"0002409"}}}


id: PBO:0057984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3910-2","termid":"PBO:0057984"}


id: PBO:0074576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 32","termid":"PBO:0074576"}


id: PATO:0001065
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001065 relative stiffness (obsolete PATO:0001065)","termid":"PATO:0001065"}


id: MONDO:0017893
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of acute myeloid leukemia that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bilineal acute myeloid leukemia","termid":"MONDO:0011118"},{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"inherited acute myeloid leukemia","secondary_identifiers":["NCIT:C7175","Orphanet:319465","SCTID:764940002","GARD:17450","UMLS:C4707228","MEDGEN:1634915"],"synonyms":[{"name":"Pure familial AML","type":"exact"},{"name":"Pure familial acute myeloid leukaemia","type":"exact"},{"name":"Pure familial acute myeloid leukemia","type":"exact"},{"name":"familial AML","type":"exact"},{"name":"hereditary acute myeloid leukaemia","type":"exact"},{"name":"hereditary acute myeloid leukemia","type":"exact"},{"name":"inherited AML","type":"exact"}],"termid":"MONDO:0017893","xrefs":{"Monarch":{"xref_id":"0017893"}}}


id: PBO:0012045
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase activity of Mcm4/6/7 complex requires 5' overhang","termid":"PBO:0012045"}


id: MOD:00620
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:7856876","Unimod:301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cysteine monobromobimane derivative","synonyms":[{"name":"Bromobimane","type":"related"},{"name":"Monobromobimane derivative","type":"related"}],"termid":"MOD:00620"}


id: MONDO:0003511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete testicular germ cell cancer (obsolete MONDO:0003511)","termid":"MONDO:0003511","xrefs":{"Monarch":{"xref_id":"0003511"}}}


id: RO:0003307
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the presence of the entity reduces or eliminates some or all aspects of the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"contributes_to_severity_of_condition","termid":"RO:0003305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ameliorates_condition","termid":"RO:0003307"}


id: MONDO:0022779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lip palate oligodontia syndactyly pili torti","termid":"MONDO:0022779","xrefs":{"Monarch":{"xref_id":"0022779"}}}


id: GO:1900137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chemokine activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"negative regulation of cytokine activity","termid":"GO:0060302"},{"relation_name":"is_a","term_name":"regulation of chemokine activity","termid":"GO:1900136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of chemokine activity","synonyms":[{"name":"down regulation of chemokine activity","type":"exact"},{"name":"down-regulation of chemokine activity","type":"exact"},{"name":"downregulation of chemokine activity","type":"exact"},{"name":"inhibition of chemokine activity","type":"narrow"}],"termid":"GO:1900137"}


id: MONDO:0800373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to carbon monoxide.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbon monoxide poisoning","synonyms":[{"name":"CO Poisoning","type":"exact"}],"termid":"MONDO:0800373","xrefs":{"Monarch":{"xref_id":"0800373"}}}


id: PBO:0056930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase pseudogene 2","termid":"PBO:0056930"}


id: FYPO:0006115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of oxidation of one or more specific proteins, or of specific protein sites, is increased, resulting in the accumulation of proteins with oxidative modifications including carbonylated proteins, during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:28640807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein oxidation during vegetative growth","termid":"FYPO:0000219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased protein oxidation during mitotic S phase","synonyms":[{"name":"accumulation of carbonylated proteins during S phase during vegetative growth","type":"related"},{"name":"increased level of disulfides during mitotic S phase","type":"related"},{"name":"increased level of oxidised thiols in proteins during mitotic S phase","type":"related"},{"name":"increased level of oxidized protein thiols during mitotic S phase","type":"related"},{"name":"increased protein oxidation during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006115"}


id: GO:0016977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of beta-1,4-linkages between N-acetyl-D-glucosamine and D-glucosamine residues in a partly acetylated chitosan.","definition_xrefs":["EC:3.2.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"chitosanase activity","secondary_identifiers":["MetaCyc:3.2.1.132-RXN"],"synonyms":[{"name":"chitosan N-acetylglucosaminohydrolase activity","type":"related"}],"termid":"GO:0016977"}


id: PBO:0071466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 7","termid":"PBO:0071466"}


id: GO:0008572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP required for the ATP-dependent assembly of nucleosome cores, in decondensation of sperm chromatin and in other histone-involving processes.","definition_xrefs":["EC:3.6.4.11"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleoplasmin ATPase activity (obsolete GO:0008572)","synonyms":[{"name":"nucleoplasmin ATPase activity","type":"exact"}],"termid":"GO:0008572"}


id: PBO:0044646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dendrocyte expressed seven transmembrane protein","termid":"PBO:0044646"}


id: GO:0008909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chorismate = isochorismate.","definition_xrefs":["EC:5.4.4.2","RHEA:18985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"isochorismate synthase activity","secondary_identifiers":["KEGG_REACTION:R01717","MetaCyc:ISOCHORSYN-RXN"],"synonyms":[{"name":"isochorismate hydroxymutase activity","type":"related"},{"name":"isochorismate mutase activity","type":"exact"},{"name":"isochorismate synthetase activity","type":"related"}],"termid":"GO:0008909"}


id: GO:1902157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to G2 DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to DNA damage checkpoint signaling","termid":"GO:1902153"},{"relation_name":"regulates","term_name":"response to G2 DNA damage checkpoint signaling","termid":"GO:0072426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to G2 DNA damage checkpoint signaling","synonyms":[{"name":"regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:1902157"}


id: GO:0075298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of zygospore formation, a process in which a thick-walled spore of some algae and fungi is formed by union of two similar sexual cells, usually serves as a resting spore, and produces the sporophytic phase.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"regulates","term_name":"zygospore formation","termid":"GO:0034296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of zygospore formation","termid":"GO:0075298"}


id: PR:Q10214
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4H3.06 gene.","definition_xrefs":["UniProtKB:Q10214","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4H3.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.06","synonyms":[{"name":"Spom972h-SPAC4H3.06","type":"exact"}],"termid":"PR:Q10214"}


id: GO:0046290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of isoflavonoid phytoalexins, a group of water-soluble phenolic derivatives isomeric with flavonoids that possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoflavonoid catabolic process","termid":"GO:0046288"},{"relation_name":"is_a","term_name":"isoflavonoid phytoalexin metabolic process","termid":"GO:0046289"},{"relation_name":"is_a","term_name":"phytoalexin catabolic process","termid":"GO:0052316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0098754"],"is_obsolete":false,"name":"isoflavonoid phytoalexin catabolic process","synonyms":[{"name":"isoflavonoid phytoalexin breakdown","type":"exact"},{"name":"isoflavonoid phytoalexin catabolism","type":"exact"},{"name":"isoflavonoid phytoalexin degradation","type":"exact"}],"termid":"GO:0046290"}


id: PBO:0058612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6744","termid":"PBO:0058612"}


id: PBO:0077835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP73 antisense RNA 3","termid":"PBO:0077835"}


id: GO:0048915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line system over time, from its formation to the mature structure. The posterior lateral line system develops from cranial ectodermal placodes, situated behind the ear, that give rise to both the neuromasts and the posterior lateral line sensory nerves that innervate the neuromasts. The posterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The neuromasts are innervated by several lateral line nerves, which project primarily to the hindbrain. The posterior mechanosensory lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance.","definition_xrefs":["PMID:15018940","ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line system development","termid":"GO:0048925"},{"relation_name":"part_of","term_name":"mechanosensory lateral line system development","termid":"GO:0048881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line system development","synonyms":[{"name":"PLL","type":"related"}],"termid":"GO:0048915"}


id: PBO:0078608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 62","termid":"PBO:0078608"}


id: MONDO:0700068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myopathy in which the cause of the disease is a variation in the POMGNT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"disorder of protein O-glycosylation","termid":"MONDO:0017741"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005066","MONDO:0005336","MONDO:0024322"],"is_obsolete":false,"name":"myopathy caused by variation in POMGNT1","synonyms":[{"name":"POMGNT1 myopathy","type":"exact"},{"name":"POMGNT1-related myopathy","type":"exact"},{"name":"myopathy caused by mutation in POMGNT1","type":"exact"}],"termid":"MONDO:0700068","xrefs":{"Monarch":{"xref_id":"0700068"}}}


id: MONDO:0019878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3q26 microduplication syndrome is a rare chromosomal anomaly characterized by prenatal and postnatal growth retardation, developmental delay, intellectual impairment, dysmorphic signs and variable combination of congenital anomalies, including cardiovascular, genitourinary and skeletal anomalies and spectrum of caudal malformations.","definition_xrefs":["Orphanet:96095"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 3","termid":"MONDO:0016954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3q26 microduplication syndrome","secondary_identifiers":["GARD:19311","MEDGEN:1670584","UMLS:C4755319"],"synonyms":[{"name":"Cornelia de Lange-like syndrome","type":"exact"},{"name":"dup(3)(q26)","type":"exact"},{"name":"dup(3q) syndrome","type":"exact"},{"name":"trisomy 3q26","type":"exact"}],"termid":"MONDO:0019878","xrefs":{"Monarch":{"xref_id":"0019878"}}}


id: GO:0031428
data:
  {"annotated_genes":["SJAG_03410","SJAG_02350","SJAG_00943","SJAG_02377","SJAG_00744"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71190,73680,75836,76596,110503],"is_not":false,"summary":null,"term":"GO:0031428"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex containing a box C/D type RNA that is capable of ribose-2'-O-methylation of target RNAs. Box C/D type RNAs are widespread in eukaryotes and in Archaea, suggesting that an RNA-based guide mechanism for directing specific RNA 2'-O-ribose methylations was present in the common ancestor of Archaea and Eukarya.","definition_xrefs":["PMID:11842104","ISBN:0879695897","PMID:17284456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box C/D RNP complex","termid":"GO:0170049"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00744":null,"SJAG_00943":null,"SJAG_02350":null,"SJAG_02377":null,"SJAG_03410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"box C/D methylation guide snoRNP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"box C/D sRNP complex","type":"narrow"},{"name":"box C/D small nucleolar ribonucleoprotein complex","type":"narrow"},{"name":"box C/D snoRNP complex","type":"narrow"},{"name":"box C/D snoRNP ribose 2'-O methylase complex","type":"exact"},{"name":"box C/D snoRNP ribose-2'-O-methyltransferase complex","type":"narrow"}],"termid":"GO:0031428","terms_by_termid":{"GO:0031428":null}}


id: PBO:0067739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 38","termid":"PBO:0067739"}


id: PBO:0082852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coproporphyrinogen III oxidase; oxygen-requiring enzyme that catalyzes sixth step in heme biosynthetic pathway; transcription is repressed by oxygen and heme (via Rox1p and Hap1p); human homolog CPOX can complement yeast mutant and allow growth of haploid null after sporulation of a heterozygous diploid","termid":"PBO:0082852"}


id: GO:0050585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxyphenylpyruvate + O2 = 4-hydroxymandelate + CO2.","definition_xrefs":["MetaCyc:1.13.11.46-RXN","EC:1.13.11.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxymandelate synthase activity","secondary_identifiers":["Reactome:R-HSA-9856718","RHEA:21376"],"synonyms":[{"name":"4-hydroxyphenylpyruvate dioxygenase II activity","type":"narrow"},{"name":"4-hydroxyphenylpyruvate:oxygen oxidoreductase (decarboxylating)","type":"broad"}],"termid":"GO:0050585"}


id: PBO:0072719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoid X receptor beta","termid":"PBO:0072719"}


id: PATO:0002056
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fragility which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fragile","termid":"PATO:0001362"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased fragility","termid":"PATO:0002056"}


id: MONDO:0004269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"breast secretory carcinoma","termid":"MONDO:0003208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast cystic hypersecretory carcinoma","secondary_identifiers":["DOID:7537"],"synonyms":[{"name":"cystic hypersecretory carcinoma of the breast","type":"related"},{"name":"cystic hypersecretory duct carcinoma of the breast","type":"exact"}],"termid":"MONDO:0004269","xrefs":{"Monarch":{"xref_id":"0004269"}}}


id: GO:0035448
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a thylakoid membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of membrane","termid":"GO:0019898"},{"relation_name":"part_of","term_name":"thylakoid membrane","termid":"GO:0042651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of thylakoid membrane","synonyms":[{"name":"extrinsic to thylakoid membrane","type":"narrow"},{"name":"peripheral to thylakoid membrane","type":"exact"}],"termid":"GO:0035448"}


id: PBO:0042299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD8 subunit alpha","termid":"PBO:0042299"}


id: MONDO:0018261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"NEVADA (Nevus Epidermicus Verrucosus with AngioDysplasia and Aneurysms) syndrome is a rare, life-threatening, cutaneous disease characterized by a keratinocytic epidermal nevus presenting thick, hystrix-like, white or brownish hyperkeratosis associated with multiple extracutaneous vascular malformations, including angiodysplasia that involves large-vessel arteriovenous shunts that may be fatal during the neonatal period.","definition_xrefs":["Orphanet:370059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Nevada syndrome","secondary_identifiers":["MEDGEN:1667994","UMLS:C4751431","GARD:21593"],"synonyms":[{"name":"Nevus epidermicus verrucosus with angiodysplasia and aneurysms","type":"exact"}],"termid":"MONDO:0018261","xrefs":{"Monarch":{"xref_id":"0018261"}}}


id: PBO:0087813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tetrameric phosphoglycerate mutase; mediates the conversion of 3-phosphoglycerate to 2-phosphoglycerate during glycolysis and the reverse reaction during gluconeogenesis","termid":"PBO:0087813"}


id: PBO:0040105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acylsphingosine amidohydrolase 1","termid":"PBO:0040105"}


id: MONDO:0004282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eccrine porocarcinoma (obsolete MONDO:0004282)","termid":"MONDO:0004282","xrefs":{"Monarch":{"xref_id":"0004282"}}}


id: GO:0120023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to somatostatin, a polypeptide hormone involved in regulating pancreatic alpha and pancreatic beta cells and controlling growth hormone secretion as well as many other functions. Somatostatin is produced by several cell types including pancreatic delta cells. There are several different mature forms of somatostatin.","definition_xrefs":["GOC:cvs","PMID:20472043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"somatostatin binding","termid":"GO:0120023"}


id: SO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to delete a uridine.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000918 delete_U (obsolete SO:0000918)","synonyms":[{"name":"delete U","type":"exact"}],"termid":"SO:0000918"}


id: MONDO:0000009
data:
  {"annotated_genes":["SJAG_03703","SJAG_02091","SJAG_02093","SJAG_04621","SJAG_04312","SJAG_03204","SJAG_02431","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957580"},{"annotations":[86469,86470,86468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018794"},{"annotations":[86709,86708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015912"},{"annotations":[85508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014078"},{"annotations":[87076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014518"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"blood platelet disease","termid":"MONDO:0002245"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":8,"genes_by_uniquename":{"SJAG_02091":null,"SJAG_02093":null,"SJAG_02431":null,"SJAG_03204":null,"SJAG_03703":null,"SJAG_04312":null,"SJAG_04621":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"inherited bleeding disorder, platelet-type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:231200","DOID:2218","MEDGEN:610","UMLS:C0005818"],"synonyms":[{"name":"bleeding disorder, platelet-type","type":"exact"},{"name":"blood platelet disease","type":"broad"},{"name":"platelet disorder","type":"broad"},{"name":"thrombocytopathy","type":"related"}],"termid":"MONDO:0000009","terms_by_termid":{"MONDO:0014078":null,"MONDO:0014518":null,"MONDO:0015912":null,"MONDO:0018794":null,"MONDO:0957580":null},"xrefs":{"Monarch":{"xref_id":"0000009"}}}


id: PBO:0060284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 1","termid":"PBO:0060284"}


id: MONDO:0019153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Goossens-Devriendt syndrome is characterized by intrauterine growth retardation, a congenital heart defect, postaxial polydactyly, a brain malformation, abnormal hair with temporal balding, and marked facial dysmorphism. It has been reported in two siblings from unrelated parents. One of the siblings died and the surviving patient showed postnatal growth retardation and severe developmental delay.","definition_xrefs":["Orphanet:75389"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain malformation-congenital heart disease-postaxial polydactyly syndrome","secondary_identifiers":["SCTID:717943008","UMLS:C4303545","MEDGEN:929214","GARD:18926"],"synonyms":[{"name":"Goossens-Devriendt syndrome","type":"exact"}],"termid":"MONDO:0019153","xrefs":{"Monarch":{"xref_id":"0019153"}}}


id: PBO:0043265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 24","termid":"PBO:0043265"}


id: PBO:0004830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap123","termid":"PBO:0004830"}


id: GO:0032153
data:
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id: MOD:01416
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a dihydroxylated isoleucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated isoleucine","termid":"MOD:01414"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxylated isoleucine","synonyms":[{"name":"Hy2Ile","type":"exact"}],"termid":"MOD:01416"}


id: GO:0046835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"carbohydrate phosphorylation","termid":"GO:0046835"}


id: MONDO:0008393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Rubinstein-Taybi syndrome in which the cause of the disease is a mutation in the CREBBP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rubinstein-Taybi syndrome","termid":"MONDO:0019188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"Rubinstein-Taybi syndrome due to CREBBP mutations","secondary_identifiers":["MEDGEN:1639327","NCIT:C153290","OMIM:180849","GARD:17534","Orphanet:353277","UMLS:C4551859"],"synonyms":[{"name":"CREBBP Rubinstein-Taybi syndrome","type":"exact"},{"name":"RSTS","type":"related"},{"name":"RSTS1","type":"exact"},{"name":"Rubinstein syndrome","type":"related"},{"name":"Rubinstein-Taybi syndrome 1","type":"exact"},{"name":"Rubinstein-Taybi syndrome caused by mutation in CREBBP","type":"exact"},{"name":"Rubinstein-Taybi syndrome due to CREBBP mutations","type":"exact"},{"name":"Rubinstein-Taybi syndrome type 1","type":"exact"},{"name":"broad thumb-hallux syndrome","type":"related"},{"name":"broad thumbs and great toes, characteristic facies, and intellectual disability","type":"related"},{"name":"broad thumbs and great toes, characteristic facies, and mental retardation","type":"related"}],"termid":"MONDO:0008393","xrefs":{"Monarch":{"xref_id":"0008393"}}}


id: MONDO:0009533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dahlberg-Borer-Newcomer syndrome is a very rare ectodermal dysplasia syndrome, described in 2 adult brothers, characterized by the association of hypoparathyroidism, nephropathy, congenital lymphedema, mitral valve prolapse and brachytelephalangy. Additional features include mild facial dysmorphism, hyperthricoses, and nail abnormalities.","definition_xrefs":["Orphanet:1563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"Dahlberg-Borer-Newcomer syndrome","secondary_identifiers":["MESH:C535769","SCTID:721083007","UMLS:C1855477","icd11.foundation:1407652122","MEDGEN:383693","OMIM:247410","GARD:237"],"synonyms":[{"name":"Dahlberg Borer Newcomer syndrome","type":"related"},{"name":"Dahlberg syndrome","type":"exact"},{"name":"hypoparathyroidism lymphedema syndrome","type":"related"},{"name":"hypoparathyroidism-lymphedema syndrome","type":"related"},{"name":"lymphedema hypoparathyroidism syndrome","type":"related"},{"name":"lymphedema-hypoparathyroidism syndrome","type":"exact"}],"termid":"MONDO:0009533","xrefs":{"Monarch":{"xref_id":"0009533"}}}


id: GO:0036157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Outer arm structure present on the outer doublet microtubules of ciliary and flagellar axonemes. Outer dynein arms contain 2-3 heavy chains, two or more intermediate chains and a cluster of 4-8 light chains. Inner and outer dynein arms have different functions in the generation of microtubule-based motility.","definition_xrefs":["PMID:2557057","GOC:BHF","GOC:vk","PMID:6218174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal dynein complex","termid":"GO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0015630"],"is_obsolete":false,"name":"outer dynein arm","synonyms":[{"name":"outer dynein arm complex","type":"exact"}],"termid":"GO:0036157"}


id: PBO:0054719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2128","termid":"PBO:0054719"}


id: MONDO:0018662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachyolmia, recessive type is a form of brachyolmia, a group of rare genetic skeletal disorders, characterized by short-trunked short stature with platyspondyly and scoliosis. Corneal opacities and precocious calcification of the costal cartilage are rare syndromic components. Premature pubarche may occur.","definition_xrefs":["Orphanet:448242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"brachyolmia","termid":"MONDO:0015262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive brachyolmia","secondary_identifiers":["GARD:13171","UMLS:C4760908","MEDGEN:1675807","icd11.foundation:625421044"],"synonyms":[{"name":"brachyolmia, Hobaek/Toledo type","type":"exact"},{"name":"brachyolmia, autosomal recessive","type":"exact"}],"termid":"MONDO:0018662","xrefs":{"Monarch":{"xref_id":"0018662"}}}


id: SO:1000117
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000117 sequence_variant_affecting_polypeptide_function (obsolete SO:1000117)","synonyms":[{"name":"mutation affecting polypeptide function","type":"related"},{"name":"sequence variant affecting polypeptide function","type":"exact"}],"termid":"SO:1000117"}


id: PBO:0084021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosylphosphatidylinositol-dependent cell wall protein; expression is periodic and decreases in respone to ergosterol perturbation or upon entry into stationary phase; depletion increases resistance to lactic acid","termid":"PBO:0084021"}


id: PBO:0017409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_improper_part","termid":"PBO:0017409"}


id: GO:1901499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hexane stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hexane","termid":"GO:1901499"}


id: GO:0010159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which information that determines the correct position at which animal organ primordia are formed is generated and perceived resulting in correct positioning of the new animal organ.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of animal organ position","termid":"GO:0010159"}


id: GO:1990227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of a paranodal junction, a highly specialized cell-cell junction found in vertebrates, which forms between a neuron and a glial cell, and has structural similarity to Drosophila septate junctions. A paranodal junction flanks the node of Ranvier in myelinated nerve, electrically isolates the myelinated from unmyelinated nerve segments, and physically separates the voltage-gated sodium channels at the node from the cluster of potassium channels underneath the myelin sheath.","definition_xrefs":["PMID:24011083","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction maintenance","termid":"GO:0045217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paranodal junction maintenance","synonyms":[{"name":"axoglial septate junction maintenance","type":"exact"},{"name":"paranodal axoglial junction maintenance","type":"exact"},{"name":"paranodal septate maintenance","type":"exact"}],"termid":"GO:1990227"}


id: PBO:0002920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZIP zinc transporter 1 (predicted)","termid":"PBO:0002920"}


id: MOD:01351
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a nitrated L-tryptophan.","definition_xrefs":["Unimod:354#W","PubMed:9252331","OMSSA:85","PubMed:8839040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrosylation","termid":"MOD:00461"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrated L-tryptophan","synonyms":[{"name":"Nitro","type":"related"},{"name":"Oxidation to nitro","type":"related"},{"name":"nitrow","type":"exact"}],"termid":"MOD:01351"}


id: GO:0009359
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that functions as an endonuclease to cleave DNA at or near a specific recognition site, when that site is unmethylated. These complexes may be dimers or tetramers; it is also possible for the endonuclease to be in a complex with the corresponding methyltransferase that methylates the recognition site. DNA restriction systems such as this are used by bacteria to defend against phage and other foreign DNA that may enter a cell.","definition_xrefs":["PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease complex","termid":"GO:1905347"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"type II site-specific deoxyribonuclease complex","synonyms":[{"name":"type II restriction enzyme complex","type":"exact"}],"termid":"GO:0009359"}


id: PBO:0090846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-N ortholog Mis15","termid":"PBO:0090846"}


id: MONDO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Protein S deficiency is a disorder that causes abnormal blood clotting. When someone bleeds, the blood begins a complicated series of rapid chemical reactions involving proteins called blood coagulation factors to stop the bleeding. Other proteins in the blood, such as protein S, usually regulate these chemical reactions to prevent excessive clotting. When protein S is missing (deficient), clotting may not be regulatednormally and affected individuals have an increased risk of forming a blood clot called a thrombosis. People at risk to haveprotein S deficiency are those with an individual or family history of multiple blood clots in the veins. Treatment may include taking medication known as blood thinners to decrease the chance of developing a blood clot.","direct_ancestors":[{"relation_name":"is_a","term_name":"thrombophilia","termid":"MONDO:0002305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"protein S deficiency","secondary_identifiers":["SCTID:1563006","GARD:4524","MESH:D018455","NANDO:1201081","UMLS:C0242666","HGNC:9456","DOID:2451","MEDGEN:69229","ICD9:289.81","NANDO:2100198","NANDO:2200690","NCIT:C99026"],"synonyms":[{"name":"Protein S deficiency","type":"exact"},{"name":"Protein S deficiency disease","type":"exact"}],"termid":"MONDO:0002304","xrefs":{"Monarch":{"xref_id":"0002304"}}}


id: GO:0070456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: galactose-1-phosphate + H2O = galactose + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"galactose-1-phosphate phosphatase activity","termid":"GO:0070456"}


id: GO:0004741
data:
  {"annotated_genes":["SJAG_03310"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76387],"is_not":false,"summary":null,"term":"GO:0004741"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-seryl-[pyruvate dehydrogenase E1 alpha subunit] + H2O = L-seryl-[pyruvate dehydrogenase E1 alpha subunit] + phosphate.","definition_xrefs":["EC:3.1.3.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase activity","termid":"GO:0004722"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03310":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0004721","GO:0003824","GO:0016787","GO:0140096","GO:0016788"],"is_obsolete":false,"name":"[pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-204169","GO:0019906","RHEA:12669","MetaCyc:3.1.3.43-RXN"],"synonyms":[{"name":"[pyruvate dehydrogenase (lipoamide)] phosphatase activity","type":"exact"},{"name":"[pyruvate dehydrogenase (lipoamide)] phosphatase, intrinsic catalyst activity","type":"exact"},{"name":"pyruvate dehydrogenase (lipoamide) phosphatase activity","type":"exact"}],"termid":"GO:0004741","terms_by_termid":{"GO:0004741":null}}


id: PBO:0040430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase copper transporting alpha","termid":"PBO:0040430"}


id: GO:0050028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminohexano-6-lactam + H2O = L-lysine.","definition_xrefs":["EC:3.5.2.11","RHEA:21388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"L-lysine-lactamase activity","secondary_identifiers":["KEGG_REACTION:R00463","MetaCyc:L-LYSINE-LACTAMASE-RXN"],"synonyms":[{"name":"L-alpha-aminocaprolactam hydrolase activity","type":"related"},{"name":"L-lysinamidase activity","type":"related"},{"name":"L-lysine-1,6-lactam lactamhydrolase activity","type":"related"}],"termid":"GO:0050028"}


id: FYPO:0005711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer protein complexes consisting of cyclin B1 and cyclin-dependent kinase 1 (CDK1) than normal.","definition_xrefs":["PMID:8087848","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cyclin B1-CDK1 complex level","synonyms":[{"name":"cyclin B1-CDK1 complexes present at decreased level","type":"exact"},{"name":"decreased cyclin B1-CDK1 complex level during mitotic cell cycle","type":"related"},{"name":"decreased cyclin B1-CDK1 complex level during vegetative growth","type":"exact"},{"name":"reduced cyclin B1-CDK1 complex level","type":"exact"}],"termid":"FYPO:0005711"}


id: PBO:0081649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 574","termid":"PBO:0081649"}


id: PBO:0063958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase type 1 beta","termid":"PBO:0063958"}


id: PBO:0082283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP4A phosphorylase; bifunctional diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase and ADP sulfurylase involved in catabolism of bis(5'-nucleosidyl) tetraphosphates; catalyzes phosphorolysis of dinucleoside oligophosphates, cleaving substrates' alpha/beta-anhydride bond and introducing Pi into the beta-position of the corresponding NDP formed; protein abundance increases under DNA replication stress; APA1 has a paralog, APA2, that arose from the whole genome duplication","termid":"PBO:0082283"}


id: GO:0044395
data:
  {"annotated_genes":["SJAG_01367"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91344],"is_not":false,"summary":null,"term":"GO:0044395"}]},"cv_name":"biological_process","definition":"The process of directing proteins towards the vacuolar membrane; usually uses signals contained within the protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to membrane","termid":"GO:0006612"},{"relation_name":"is_a","term_name":"protein targeting to vacuole","termid":"GO:0006623"},{"relation_name":"is_a","term_name":"protein localization to vacuolar membrane","termid":"GO:1903778"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01367":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006605","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein targeting to vacuolar membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044395","terms_by_termid":{"GO:0044395":null}}


id: PBO:0071386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 9","termid":"PBO:0071386"}


id: PBO:0082983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosine deaminase; zinc metalloenzyme that catalyzes the hydrolytic deamination of cytosine to uracil; of biomedical interest because it also catalyzes the deamination of 5-fluorocytosine (5FC) to form anticancer drug 5-fluorouracil (5FU)","termid":"PBO:0082983"}


id: GO:1990489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues, in the absence of oxygen.","definition_xrefs":["GOC:mengo_curators","PMID:23079077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"anaerobic pectin catabolic process","synonyms":[{"name":"anaerobic pectin degradation","type":"exact"}],"termid":"GO:1990489"}


id: SO:0001522
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a translocation is simply moving genetic material from one chromosome to another.","direct_ancestors":[{"relation_name":"is_a","term_name":"translocaton_attribute","termid":"SO:0001520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertional","termid":"SO:0001522"}


id: GO:0080020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving coenzyme A.","definition_xrefs":["PMID:18621975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"coenzyme A biosynthetic process","termid":"GO:0015937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of coenzyme A biosynthetic process","termid":"GO:0080020"}


id: PBO:0028291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_arsenic","termid":"PBO:0028291"}


id: FYPO:0000767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of staurosporine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to staurosporine","synonyms":[{"name":"resistance to staurosporine during mitotic cell cycle","type":"related"},{"name":"resistance to staurosporine during vegetative growth","type":"exact"},{"name":"resistant to staurosporine","type":"exact"}],"termid":"FYPO:0000767"}


id: MONDO:0003287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the central nervous system. It is characterized by the presence of intersecting fascicles composed of spindle cells that often lack mitotic activity.","definition_xrefs":["NCIT:C6998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system leiomyoma","secondary_identifiers":["MEDGEN:232695","UMLS:C1334382","DOID:5126"],"synonyms":[{"name":"central nervous system leiomyoma","type":"exact"},{"name":"leiomyoma of CNS","type":"exact"},{"name":"leiomyoma of central nervous system","type":"exact"},{"name":"leiomyoma of the CNS","type":"exact"},{"name":"leiomyoma of the central nervous system","type":"exact"}],"termid":"MONDO:0003287","xrefs":{"Monarch":{"xref_id":"0003287"}}}


id: PBO:0087653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterohexameric cochaperone prefoldin complex; prefoldin binds specifically to cytosolic chaperonin and transfers target proteins to it; prefoldin complex also localizes to chromatin of actively transcribed genes in the nucleus and facilitates transcriptional elongation","termid":"PBO:0087653"}


id: PBO:0116302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leucine-zipper transcriptional activator; regulates the sulfur amino acid pathway; requires different combinations of auxiliary factors Cbf1p, Met28p, Met31p and Met32p; specific involvement in sulfur starvation-induced autophagy with Gcn4p; feedforward loop exists in the regulation of genes controlled by Met4p and Met32p; ubiquitinated by SCF-Met30p, leading to either degradation or maintenance in an inactive state; regulates degradation of its DNA-binding cofactors by SCF-Met30p targeting","termid":"PBO:0116302"}


id: GO:1903002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lipid transport across blood-brain barrier.","definition_xrefs":["GOC:TermGenie","PMID:24345162","GOC:sjp","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of transport across blood-brain barrier","termid":"GO:0150201"},{"relation_name":"is_a","term_name":"regulation of lipid transport across blood-brain barrier","termid":"GO:1903000"},{"relation_name":"positively_regulates","term_name":"lipid transport across blood-brain barrier","termid":"GO:1990379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipid transport across blood-brain barrier","synonyms":[{"name":"activation of lipid transport across blood brain barrier","type":"narrow"},{"name":"positive regulation of lipid transport across blood brain barrier","type":"exact"},{"name":"up regulation of lipid transport across blood brain barrier","type":"exact"},{"name":"up-regulation of lipid transport across blood brain barrier","type":"exact"},{"name":"upregulation of lipid transport across blood brain barrier","type":"exact"}],"termid":"GO:1903002"}


id: GO:0047504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-menthol + NADP+ = (2S,5R)-menthone + H+ + NADPH.","definition_xrefs":["RHEA:13917","EC:1.1.1.207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(-)-menthol dehydrogenase activity","secondary_identifiers":["MetaCyc:--MENTHOL-DEHYDROGENASE-RXN","KEGG_REACTION:R02177","UM-BBD_reactionID:r1182"],"synonyms":[{"name":"(-)-menthol:NADP+ oxidoreductase activity","type":"related"},{"name":"monoterpenoid dehydrogenase activity","type":"broad"}],"termid":"GO:0047504"}


id: PATO:0000215
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000215 respiratory function (obsolete PATO:0000215)","termid":"PATO:0000215"}


id: PBO:0042068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC137 pseudogene 1","termid":"PBO:0042068"}


id: PBO:0050624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid dehydrogenase like 2","termid":"PBO:0050624"}


id: PBO:0067663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 841, pseudogene","termid":"PBO:0067663"}


id: PBO:0018061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribose-1-phosphate isomerase Mri1 (predicted)","termid":"PBO:0018061"}


id: PR:Q09790
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aps1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol polyphosphate phosphohydrolase aps1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.14","synonyms":[{"name":"Ap6A hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aps1","type":"exact"},{"name":"diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"diadenosine hexaphosphate hydrolase (ADP-forming) (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09790"}


id: MOD:00232
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and 5'-phosphoadenosine through a phosphoramide ester bond to form N6-(phospho-5'-adenosine)-L-lysine.","definition_xrefs":["PubMed:4944632","PubMed:3882425","Unimod:405#K","DeltaMass:316","RESID:AA0227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"adenylated residue","termid":"MOD:01165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(phospho-5'-adenosine)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(5'-adenosine phosphonamino)hexanoic acid","type":"exact"},{"name":"5'-adenylic-N6-L-lysine","type":"exact"},{"name":"ACT_SITE N6-AMP-lysine intermediate","type":"exact"},{"name":"AMP Lysyl","type":"exact"},{"name":"AMP binding site","type":"related"},{"name":"L-lysine monoanhydride with 5'-adenylic acid","type":"exact"},{"name":"N(zeta)-5'-adenylic-L-lysine","type":"exact"},{"name":"N6-(phospho-5'-adenosine)-L-lysine","type":"exact"},{"name":"N6-L-lysine 5'-adenosine phosphoramidester","type":"exact"},{"name":"N6AMPLys","type":"exact"},{"name":"Phosphoadenosine","type":"related"},{"name":"epsilon-5'-adenylic-L-lysine","type":"exact"}],"termid":"MOD:00232"}


id: PBO:0079588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2D3 antisense RNA 1","termid":"PBO:0079588"}


id: GO:0099110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of a protein to the cortex of the cell tip, driven by polymerization of a microtubule to which the protein is attached.","definition_xrefs":["GOC:dos","GOC:vw","PMID:11018050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule polymerization based protein transport","termid":"GO:0099112"},{"relation_name":"is_a","term_name":"protein localization to cell cortex of cell tip","termid":"GO:1990896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"microtubule polymerization based protein transport to cell tip cortex","termid":"GO:0099110"}


id: GO:0009620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fungus","secondary_identifiers":["GO:0009621"],"synonyms":[{"name":"response to fungi","type":"exact"}],"termid":"GO:0009620"}


id: GO:0035324
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intercellular bridge that connects the germline cells of a female cyst.","definition_xrefs":["PMID:9635420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline ring canal","termid":"GO:0045172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"female germline ring canal","synonyms":[{"name":"nurse cell ring canal","type":"narrow"},{"name":"ovarian ring canal","type":"narrow"}],"termid":"GO:0035324"}


id: MONDO:1012261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stringhalt, non-human animal","termid":"MONDO:1011631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stringhalt, horse","secondary_identifiers":["OMIA:000950-9796"],"termid":"MONDO:1012261","xrefs":{"Monarch":{"xref_id":"1012261"}}}


id: PBO:0064571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popeye domain containing 3","termid":"PBO:0064571"}


id: MONDO:0000198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete linear skin defects with multiple congenital anomalies (obsolete MONDO:0000198)","termid":"MONDO:0000198","xrefs":{"Monarch":{"xref_id":"0000198"}}}


id: GO:0021632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the optic nerve to attain its fully functional state. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","GOC:dgh","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"optic nerve development","termid":"GO:0021554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic nerve maturation","synonyms":[{"name":"CN II maturation","type":"exact"}],"termid":"GO:0021632"}


id: MONDO:1012505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hydrallantois, non-human animal","termid":"MONDO:1011672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrallantois, sheep","secondary_identifiers":["OMIA:002053-9940"],"termid":"MONDO:1012505","xrefs":{"Monarch":{"xref_id":"1012505"}}}


id: PR:P40900
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- isp4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process protein isp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29B5.02c","synonyms":[{"name":"Spom972h-isp4","type":"exact"}],"termid":"PR:P40900"}


id: FYPO:0000190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch localization is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0004803","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actin cortical patch localization during vegetative growth","synonyms":[{"name":"abnormal F-actin patch localization during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch localisation during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch localization during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch location during vegetative growth","type":"related"},{"name":"abnormal actin patch localization during vegetative growth","type":"exact"}],"termid":"FYPO:0000190"}


id: PBO:0015236
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CwP1 Partner","termid":"PBO:0015236"}


id: PBO:0001549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase inhibitor (predicted)","termid":"PBO:0001549"}


id: PBO:0005651
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates Pka1 pathway genes","termid":"PBO:0005651"}


id: PBO:0048719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin pseudogene 2","termid":"PBO:0048719"}


id: MONDO:0005963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition resulting from infection with the second stage larvae of the parasite Spirometra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cestode infectious disease","termid":"MONDO:0042488"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sparganosis","secondary_identifiers":["DOID:10080","ICD9:123.5","MEDGEN:52426","MESH:D013031","NCIT:C35030","ICD10CM:B70.1","icd11.foundation:22873958","SCTID:31659000","UMLS:C0037753","EFO:0007488"],"synonyms":[{"name":"Spirometra caused disease or disorder","type":"exact"},{"name":"Spirometra disease or disorder","type":"exact"},{"name":"Spirometra infectious disease","type":"exact"},{"name":"infection by sparganum","type":"exact"},{"name":"sparganosis [larval diphyllobothriasis]","type":"exact"}],"termid":"MONDO:0005963","xrefs":{"Monarch":{"xref_id":"0005963"}}}


id: GO:0046445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzyl isoquinoline alkaloids, compounds with bicyclic N-containing aromatic rings.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid metabolic process","termid":"GO:0033076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzyl isoquinoline alkaloid metabolic process","synonyms":[{"name":"benzyl isoquinoline alkaloid metabolism","type":"exact"}],"termid":"GO:0046445"}


id: PBO:0002190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat protein Ppk3","termid":"PBO:0002190"}


id: FYPO:0004879
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) at the centromere central core.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000702"],"is_obsolete":false,"name":"normal chromatin binding at centromere central core","termid":"FYPO:0004879"}


id: GO:0045762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adenylate cyclase activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cyclase activity","termid":"GO:0031281"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase activity","termid":"GO:0045761"},{"relation_name":"is_a","term_name":"positive regulation of lyase activity","termid":"GO:0051349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adenylate cyclase activity","synonyms":[{"name":"adenylate cyclase activator","type":"related"},{"name":"positive regulation of adenylyl cyclase activity","type":"exact"},{"name":"stimulation of adenylate cyclase activity","type":"narrow"},{"name":"up regulation of adenylate cyclase activity","type":"exact"},{"name":"up-regulation of adenylate cyclase activity","type":"exact"},{"name":"upregulation of adenylate cyclase activity","type":"exact"}],"termid":"GO:0045762"}


id: MONDO:0032679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 37","secondary_identifiers":["MEDGEN:1675208","OMIM:618329","DOID:0111499","UMLS:C5193031"],"synonyms":[{"name":"COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 37","type":"related"},{"name":"COXPD37","type":"related"}],"termid":"MONDO:0032679","xrefs":{"Monarch":{"xref_id":"0032679"}}}


id: GO:0044565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a dendritic cell population by cell division. A dendritic cell is a cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.","definition_xrefs":["PMID:18469816","CL:0000451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell proliferation","termid":"GO:0032943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell proliferation","termid":"GO:0044565"}


id: PBO:0036003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0036003"}


id: GO:0032795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heterotrimeric G-protein.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"heterotrimeric G-protein binding","termid":"GO:0032795"}


id: PBO:0004781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 5 (predicted)","termid":"PBO:0004781"}


id: PBO:0054903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2317","termid":"PBO:0054903"}


id: PBO:0035881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_protein_transport_during_vegetative_growth","termid":"PBO:0035881"}


id: GO:0061553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for ganglion to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"ganglion development","termid":"GO:0061548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion maturation","synonyms":[{"name":"ganglia maturation","type":"related"}],"termid":"GO:0061553"}


id: MONDO:0014314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"sacral agenesis-abnormal ossification of the vertebral bodies-persistent notochordal canal syndrome","secondary_identifiers":["Orphanet:397927","OMIM:615709","UMLS:C3810343","MEDGEN:816673","GARD:17642"],"synonyms":[{"name":"SAVA","type":"related"},{"name":"sacral agenesis with vertebral anomalies","type":"related"}],"termid":"MONDO:0014314","xrefs":{"Monarch":{"xref_id":"0014314"}}}


id: FYPO:0009069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ciclopirox olamine. Cells stop growing (and may die) at a concentration of ciclopirox olamine that allows wild type cells to grow.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to ciclopirox olamine","synonyms":[{"name":"hypersensitive to ciclopirox olamine","type":"exact"},{"name":"sensitive to ciclopirox olamine during mitotic cell cycle","type":"related"},{"name":"sensitive to ciclopirox olamine during vegetative growth","type":"exact"}],"termid":"FYPO:0009069"}


id: PBO:0049919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes related family bHLH transcription factor with YRPW motif like","termid":"PBO:0049919"}


id: MONDO:1012511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"generalized myoclonic epilepsy with photosensitivity, non-human animal","termid":"MONDO:1011639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"generalized myoclonic epilepsy with photosensitivity, dog","secondary_identifiers":["OMIA:002095-9615"],"termid":"MONDO:1012511","xrefs":{"Monarch":{"xref_id":"1012511"}}}


id: GO:1902299
data:
  {"annotated_genes":["SJAG_00247","SJAG_02607","SJAG_02074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115327,103636,110870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"Any pre-replicative complex assembly that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"pre-replicative complex assembly","termid":"GO:0036388"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0044085","GO:0006259","GO:0065003","GO:0007049"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pre-RC assembly involved in cell cycle DNA replication","type":"exact"},{"name":"pre-replication complex assembly involved in cell cycle DNA replication","type":"related"}],"termid":"GO:1902299","terms_by_termid":{"GO:1902985":null}}


id: GO:0008241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the release of C-terminal dipeptides from a polypeptide chain.","definition_xrefs":["GOC:mb","EC:3.4.15.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008233","GO:0140096","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"peptidyl-dipeptidase activity","termid":"GO:0008241"}


id: PBO:0071768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2 pseudogene 1","termid":"PBO:0071768"}


id: PBO:0054806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2219","termid":"PBO:0054806"}


id: PBO:0057455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 574","termid":"PBO:0057455"}


id: PBO:0109966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial steroid dehydrogenase","termid":"PBO:0109966"}


id: PBO:0030819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glucose_import","termid":"PBO:0030819"}


id: GO:0097263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eoxin D4 + H20 = eoxin E4 + glycine.","definition_xrefs":["PMID:18647347","PMID:18184802","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0008233","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"eoxin E4 synthase activity","secondary_identifiers":["Reactome:R-HSA-2161868"],"termid":"GO:0097263"}


id: GO:0048265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli.","definition_xrefs":["PMID:12843304","PMID:10203867","Wikipedia:Pain","GOC:jid","PMID:12723742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal response to stress","termid":"GO:0033555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pain","secondary_identifiers":["GO:0048267"],"synonyms":[{"name":"physiological response to pain","type":"exact"}],"termid":"GO:0048265"}


id: GO:0050235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + pyridoxal = 4-pyridoxolactone + H+ + NADH.","definition_xrefs":["EC:1.1.1.107","RHEA:21336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyridoxal 4-dehydrogenase activity","secondary_identifiers":["MetaCyc:PYRIDOXAL-4-DEHYDROGENASE-RXN","KEGG_REACTION:R01707"],"synonyms":[{"name":"pyridoxal dehydrogenase activity","type":"related"},{"name":"pyridoxal:NAD+ 4-oxidoreductase activity","type":"related"}],"termid":"GO:0050235"}


id: PBO:0076325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYP antisense RNA 1","termid":"PBO:0076325"}


id: GO:0016536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulation of the activity of cyclin-dependent protein kinase 5 activator.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin-dependent protein kinase 5 activator regulator activity (obsolete GO:0016536)","synonyms":[{"name":"cyclin-dependent protein kinase 5 activator regulator activity","type":"exact"},{"name":"cyclin-dependent protein kinase 5 activator, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0016536"}


id: PBO:0071496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34","termid":"PBO:0071496"}


id: PBO:0090927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor G Mef2","termid":"PBO:0090927"}


id: GO:0004432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class I PI3K activated by tyrosine phosphorylation events.","definition_xrefs":["PMID:11050418"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-4-phosphate kinase, class IA (obsolete GO:0004432)","synonyms":[{"name":"1-phosphatidylinositol-4-phosphate kinase, class IA","type":"exact"}],"termid":"GO:0004432"}


id: MONDO:0700129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Translocation Down syndrome in which the extra (partial or total) copy of chromosome 21 attached to another chromosome is present in some of the cells of the organism.","direct_ancestors":[{"relation_name":"is_a","term_name":"translocation Down syndrome","termid":"MONDO:0700128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic translocation Down syndrome","termid":"MONDO:0700129","xrefs":{"Monarch":{"xref_id":"0700129"}}}


id: GO:0034810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,5-dihydroxybenzo(a)pyrene + O2 = 4,5-chrysenedicarboxylate.","definition_xrefs":["UM-BBD_reactionID:r1128"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,5-dihydroxybenzo(a)pyrene dioxygenase activity (obsolete GO:0034810)","termid":"GO:0034810"}


id: GO:0018556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dihydroxybenzenoid + O2 = H+ + distal extradiol ring cleavage. Substrates are 2,2',3-trihydroxybiphenyl (forms 2-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate) and 2,2',3-trihydroxydiphenylether (forms 2,3-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate).","definition_xrefs":["UM-BBD_enzymeID:e0032"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,2',3-trihydroxybiphenyl dioxygenase activity (obsolete GO:0018556)","termid":"GO:0018556"}


id: PBO:0046978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member C1, pseudogene","termid":"PBO:0046978"}


id: PBO:0072458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 22","termid":"PBO:0072458"}


id: GO:0009416
data:
  {"annotated_genes":["SJAG_05197","SJAG_04190","SJAG_02818","SJAG_01648","SJAG_04877","SJAG_00814","SJAG_03898","SJAG_02182","SJAG_02828","SJAG_00729","SJAG_00272","SJAG_02334","SJAG_01010","SJAG_04150","SJAG_00208","SJAG_01262","SJAG_00863","SJAG_02200","SJAG_05242","SJAG_02199","SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[119662,119661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[103140,95572,77250,109416],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[113136,67864,94007,69185,106265,66647,104543,96350,88354,70439,97451,60311,76010,65061,66005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.","definition_xrefs":["GOC:go_curators","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to radiation","termid":"GO:0009314"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02860":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to light stimulus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null,"PMID:23873862":null},"termid":"GO:0009416","terms_by_termid":{"GO:0009785":null,"GO:0070914":null,"GO:0071483":null,"GO:1904161":null}}


id: GO:0102830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 stachyose = verbascose + raffinose.","definition_xrefs":["PMID:12060258","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"verbascose synthase activity","secondary_identifiers":["MetaCyc:RXN-8286"],"termid":"GO:0102830"}


id: PBO:0027501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_FR901464","termid":"PBO:0027501"}


id: PBO:0090422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 regulatory subunit beta isoform 2, Ckb2","termid":"PBO:0090422"}


id: GO:0015205
data:
  {"annotated_genes":["SJAG_04717","SJAG_04714","SJAG_03777","SJAG_02147"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78438],"is_not":false,"summary":null,"term":"GO:0015205"},{"annotations":[112853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015207"},{"annotations":[112854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015208"},{"annotations":[95872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"},{"annotations":[80303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042907"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a nucleobase, any nitrogenous base that is a constituent of a nucleoside, nucleotide, or nucleic acidfrom one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02147":null,"SJAG_03777":null,"SJAG_04714":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"nucleobase transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015392"],"termid":"GO:0015205","terms_by_termid":{"GO:0015205":null,"GO:0015207":null,"GO:0015208":null,"GO:0015505":null,"GO:0042907":null}}


id: PBO:0042560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 2","termid":"PBO:0042560"}


id: PBO:0091182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orf333","termid":"PBO:0091182"}


id: PBO:0059915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 1","termid":"PBO:0059915"}


id: PBO:0072240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 15","termid":"PBO:0072240"}


id: GO:0032998
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of an Fc-epsilon RI alpha chain and an Fc-epsilon RI gamma chain dimer with or without an Fc-episilon RI beta chain and additional signaling components. The complex functions primarily as an activating receptor for IgE.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor complex","termid":"GO:0032997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Fc-epsilon receptor I complex","synonyms":[{"name":"FceRI complex","type":"exact"},{"name":"IgE receptor complex","type":"broad"},{"name":"immunoglobulin E receptor complex","type":"broad"}],"termid":"GO:0032998"}


id: MONDO:0043280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition caused by degeneration, atrophy, and destruction of the distal part of a nerve fiber's axon and myelin, when continuity with the neural cell nucleus has been severed due to injury. Signs and symptoms include muscle weakness, altered sensation, and limb numbness.","definition_xrefs":["NCIT:C85223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wallerian degeneration","secondary_identifiers":["MESH:D014855","UMLS:C0043020","MEDGEN:12132"],"synonyms":[{"name":"Degeneration, Wallerian","type":"related"},{"name":"Wallerian Degeneration","type":"exact"},{"name":"Wallerian degeneration of the pyramidal tract","type":"related"}],"termid":"MONDO:0043280","xrefs":{"Monarch":{"xref_id":"0043280"}}}


id: PBO:0041724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase IG","termid":"PBO:0041724"}


id: GO:0001656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. In mammals, the metanephros is the excretory organ of the fetus, which develops into the mature kidney and is formed from the rear portion of the nephrogenic cord. The metanephros is an endocrine and metabolic organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["ISBN:0192800752","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephros development","termid":"GO:0001656"}


id: PBO:0001529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP dissociation inhibitor Gdi1 (predicted)","termid":"PBO:0001529"}


id: FYPO:0002302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is spheroid, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, abnormal morphology","termid":"FYPO:0002148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, spheroid cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, rounded cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, spheroid cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, spheroid cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, spheroid cell","type":"exact"}],"termid":"FYPO:0002302"}


id: GO:0002698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an immune effector process.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"negatively_regulates","term_name":"immune effector process","termid":"GO:0002252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of immune effector process","synonyms":[{"name":"down regulation of immune effector process","type":"exact"},{"name":"down-regulation of immune effector process","type":"exact"},{"name":"downregulation of immune effector process","type":"exact"},{"name":"inhibition of immune effector process","type":"narrow"}],"termid":"GO:0002698"}


id: MONDO:0859761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"SLC12A2-related developmental delay-intellectual disability-sensorineural deafness syndrome","termid":"MONDO:0859000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC12A2-related autosomal recessive neonatal-developmental delay-intellectual disability-feeding difficulty-sensorineural deafness syndrome","secondary_identifiers":["Orphanet:633021"],"termid":"MONDO:0859761","xrefs":{"Monarch":{"xref_id":"0859761"}}}


id: MONDO:0100202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumbar disk herniation, susceptibility to","secondary_identifiers":["MEDGEN:393597","UMLS:C2676840"],"termid":"MONDO:0100202","xrefs":{"Monarch":{"xref_id":"0100202"}}}


id: FYPO:0004596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of DNA-dependent DNA replication is abnormal, with replication reinitiating during G2 phase of the mitotic cell cycle and resulting in one or more rounds of rereplication of the entire genome.","definition_xrefs":["PMID:11532929","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","termid":"FYPO:0001425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal negative regulation of DNA replication initiation during mitotic G2 phase resulting in complete rereplication","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation during G2 phase resulting in complete rereplication during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of DNA replication initiation during mitotic G2 phase during vegetative growth, resulting in complete rereplication","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation during mitotic G2 phase resulting in complete re-replication","type":"exact"},{"name":"abnormal negative regulation of DNA-dependent DNA replication initiation during mitotic G2 phase resulting in complete rereplication","type":"exact"}],"termid":"FYPO:0004596"}


id: PBO:0047343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphatase 1","termid":"PBO:0047343"}


id: GO:0075341
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear body that reacts against SP100 auto-antibodies (PML = promyelocytic leukemia) located within a cell of a host organism.","definition_xrefs":["GOC:BHF","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell PML body","synonyms":[{"name":"host cell PML NB","type":"exact"},{"name":"host cell PML nuclear body","type":"exact"}],"termid":"GO:0075341"}


id: PBO:0052705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 6","termid":"PBO:0052705"}


id: PBO:0043092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 4","termid":"PBO:0043092"}


id: PR:O60149
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps38 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 38 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.19","synonyms":[{"name":"Spom972h-vps38","type":"exact"}],"termid":"PR:O60149"}


id: PR:O13639
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenosylhomocysteinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23420:SF0","PRO:DNx","OMA:SCHPO02844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.18c","secondary_identifiers":["UniProtKB:O13639"],"synonyms":[{"name":"AdoHcyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-adenosyl-L-homocysteine hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AHCY","type":"exact"}],"termid":"PR:O13639"}


id: GO:1903483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of maintenance of mitotic actomyosin contractile ring localization.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of maintenance of mitotic actomyosin contractile ring localization (obsolete GO:1903483)","synonyms":[{"name":"regulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"regulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"regulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"regulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903483"}


id: PR:O94440
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC637.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C637.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.03","synonyms":[{"name":"Spom972h-SPAC637.03","type":"exact"}],"termid":"PR:O94440"}


id: MONDO:0019952
data:
  {"annotated_genes":["SJAG_03145","SJAG_03703","SJAG_00088","SJAG_04887","SJAG_01665","SJAG_02229","SJAG_00185","SJAG_02658","SJAG_04567","SJAG_04473","SJAG_03025","SJAG_04397","SJAG_00319","SJAG_02919","SJAG_04553","SJAG_01300","SJAG_MIT04","SJAG_04816","SJAG_00885","SJAG_MIT03","SJAG_02265","SJAG_00228","SJAG_01647","SJAG_04665","SJAG_03248","SJAG_04183","SJAG_03379","SJAG_01671","SJAG_00260","SJAG_02431","SJAG_03815","SJAG_07005","SJAG_02398","SJAG_04500","SJAG_04621","SJAG_05199","SJAG_MIT20","SJAG_00750","SJAG_03794","SJAG_02050","SJAG_06022","SJAG_MIT13","SJAG_03992"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011451"},{"annotations":[85465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014051"},{"annotations":[85444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014667"},{"annotations":[85442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014668"},{"annotations":[85888,85889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013116"},{"annotations":[87192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859264"},{"annotations":[86879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957224"},{"annotations":[85642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008070"},{"annotations":[86925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859517"},{"annotations":[86928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859523"},{"annotations":[85690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800341"},{"annotations":[85516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012239"},{"annotations":[86234,86235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"},{"annotations":[87460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0034109"},{"annotations":[87113,87114,87112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013472"},{"annotations":[86501,86503,86500,86502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010789"},{"annotations":[85939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030935"},{"annotations":[85940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030937"},{"annotations":[85912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030974"},{"annotations":[86553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100294"},{"annotations":[85484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014062"},{"annotations":[86044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020714"},{"annotations":[85616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044714"},{"annotations":[85613,85614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008050"},{"annotations":[85949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030927"},{"annotations":[85829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009709"},{"annotations":[87205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032852"},{"annotations":[87242,87243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024553"},{"annotations":[87594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013307"},{"annotations":[86686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859168"},{"annotations":[85402,85401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009708"},{"annotations":[85622,85623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011577"},{"annotations":[87074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009725"},{"annotations":[86219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012538"},{"annotations":[86884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024528"},{"annotations":[85517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012238"},{"annotations":[85887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013117"},{"annotations":[86699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"},{"annotations":[85479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014656"},{"annotations":[86770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020845"},{"annotations":[86412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957993"},{"annotations":[86150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014800"},{"annotations":[86784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011835"},{"annotations":[86130],"is_not":false,"rel_names":["is_a"],"summary":null,"term"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id: GO:0034081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that carries out enzymatic reactions involved in the biosynthesis of polyketides, any of a diverse group of natural products synthesized via linear poly-beta-ketones.","definition_xrefs":["PMID:12636085","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"polyketide synthase complex","synonyms":[{"name":"PKS","type":"related"},{"name":"PKS complex","type":"exact"}],"termid":"GO:0034081"}


id: PBO:0090575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5","termid":"PBO:0090575"}


id: PBO:0051828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 3","termid":"PBO:0051828"}


id: PBO:0003735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thiouridylase subunit Ctu2","termid":"PBO:0003735"}


id: MONDO:0008362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ragweed sensitivity","secondary_identifiers":["UMLS:C1867394","MEDGEN:356768","MESH:C566725","OMIM:179450"],"synonyms":[{"name":"ragweed sensitivity","type":"exact"}],"termid":"MONDO:0008362","xrefs":{"Monarch":{"xref_id":"0008362"}}}


id: PBO:0062280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily I member 1","termid":"PBO:0062280"}


id: PBO:0063562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline, glutamate and leucine rich protein 1","termid":"PBO:0063562"}


id: FYPO:0004225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of nucleosome binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin binding","termid":"FYPO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"abnormal nucleosome binding","termid":"FYPO:0004225"}


id: MONDO:0017386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant mesenchymal neoplasm with skeletal muscle differentiation, occurring in adults and rarely in children. The tumor is characterized by the presence of bizarre round, spindle, and polygonal cells. Clinical presentation includes a rapidly enlarging painful mass usually of the lower extremities.","definition_xrefs":["NCIT:C4258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleomorphic rhabdomyosarcoma","secondary_identifiers":["DOID:3250","GARD:21165","SCTID:404054005","MEDGEN:137770","ICD9:171.9","Orphanet:293199","ONCOTREE:PLRMS","UMLS:C0334480"],"synonyms":[{"name":"anaplastic rhabdomyosarcoma","type":"exact"},{"name":"pleomorphic rhabdomyosarcoma","type":"exact"},{"name":"pleomorphic rhabdomyosarcoma, adult type","type":"exact"}],"termid":"MONDO:0017386","xrefs":{"Monarch":{"xref_id":"0017386"}}}


id: PBO:0003440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin","termid":"PBO:0003440"}


id: PBO:0079462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23B pseudogene 2","termid":"PBO:0079462"}


id: MONDO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant melanoma within the conjunctiva of the eye.","definition_xrefs":["NCIT:C4550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival cancer","termid":"MONDO:0003454"},{"relation_name":"is_a","term_name":"ocular melanoma","termid":"MONDO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"malignant conjunctival melanoma","secondary_identifiers":["Orphanet:617910","GARD:10744","EFO:1000204","SCTID:255004001","ONCOTREE:CM","MEDGEN:138060","DOID:1751","UMLS:C0346360"],"synonyms":[{"name":"CM","type":"related"},{"name":"conjunctiva melanoma","type":"exact"},{"name":"conjunctiva melanoma (disease)","type":"exact"},{"name":"conjunctival malignant melanoma","type":"exact"},{"name":"conjunctival melanoma","type":"exact"},{"name":"malignant conjunctiva melanoma","type":"exact"},{"name":"malignant conjunctival melanoma","type":"exact"},{"name":"malignant melanoma of conjunctiva","type":"exact"},{"name":"malignant melanoma of the conjunctiva","type":"exact"},{"name":"melanoma (disease) of conjunctiva","type":"exact"},{"name":"melanoma of conjunctiva","type":"exact"},{"name":"melanoma of the conjunctiva","type":"exact"}],"termid":"MONDO:0002096","xrefs":{"Monarch":{"xref_id":"0002096"}}}


id: MONDO:0032832
data:
  {"annotated_genes":["SJAG_01053"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87298],"is_not":false,"summary":null,"term":"MONDO:0032832"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01053":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with nasal speech, dysmorphic facies, and variable skeletal anomalies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618608","UMLS:C5231426","MEDGEN:1684881"],"synonyms":[{"name":"Chromosome 12Q15 Deletion Syndrome","type":"related"},{"name":"IDNADFS","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH NASAL SPEECH, DYSMORPHIC FACIES, AND VARIABLE SKELETAL ANOMALIES","type":"related"}],"termid":"MONDO:0032832","terms_by_termid":{"MONDO:0032832":null},"xrefs":{"Monarch":{"xref_id":"0032832"}}}


id: MONDO:0014780
data:
  {"annotated_genes":["SJAG_06383"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86123],"is_not":false,"summary":null,"term":"MONDO:0014780"}]},"cv_name":"mondo","definition":"Any hyperphosphatasia-intellectual disability syndrome in which the cause of the disease is a mutation in the PIGY gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperphosphatasia-intellectual disability syndrome","termid":"MONDO:0016596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0024322"],"is_obsolete":false,"name":"hyperphosphatasia with intellectual disability syndrome 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18354","OMIM:616809","DOID:0070437","MEDGEN:906509","UMLS:C4225201"],"synonyms":[{"name":"HPMRS6","type":"exact"},{"name":"PIGY hyperphosphatasia-intellectual disability syndrome","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 12","type":"related"},{"name":"hyperphosphatasia with intellectual disability syndrome 6","type":"exact"},{"name":"hyperphosphatasia with intellectual disability syndrome 6; HPMRS6","type":"exact"},{"name":"hyperphosphatasia with intellectual disability syndrome type 6","type":"exact"},{"name":"hyperphosphatasia with mental retardation syndrome 6","type":"exact"},{"name":"hyperphosphatasia with mental retardation syndrome type 6","type":"exact"},{"name":"hyperphosphatasia-intellectual disability syndrome caused by mutation in PIGY","type":"exact"}],"termid":"MONDO:0014780","terms_by_termid":{"MONDO:0014780":null},"xrefs":{"Monarch":{"xref_id":"0014780"}}}


id: PBO:0054675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2082","termid":"PBO:0054675"}


id: PBO:0110400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PERP pseudogene 3","termid":"PBO:0110400"}


id: MONDO:0043247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by upper gastrointestinal tract bleeding caused by longitudinal mucosal tears in the gastroesophageal junction. The tears result from retching or forceful coughing. It was initially described in alcoholics.","definition_xrefs":["NCIT:C84881"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mallory-Weiss syndrome","secondary_identifiers":["UMLS:C0024633","MESH:D008309","MEDGEN:44265","SCTID:35265002"],"synonyms":[{"name":"Lacerations-gastroesophageal junction, mucosal","type":"related"},{"name":"Lacerations-gastroesophageal junctions, mucosal","type":"related"},{"name":"Mallory Weiss laceration","type":"related"},{"name":"Mallory Weiss syndrome","type":"related"},{"name":"Mallory Weiss tear","type":"related"},{"name":"Mallory-Weiss laceration","type":"related"},{"name":"Mallory-Weiss syndrome","type":"exact"},{"name":"Mallory-Weiss tear","type":"related"},{"name":"gastro-esophageal laceration-hemorrhage syndrome","type":"related"},{"name":"gastroesophageal laceration haemorrhage","type":"related"},{"name":"gastroesophageal laceration hemorrhage","type":"related"},{"name":"gastroesophageal laceration-hemorrhage","type":"related"},{"name":"gastroesophageal laceration-hemorrhage syndrome","type":"related"},{"name":"gastroesophageal laceration-hemorrhages","type":"related"},{"name":"junction, mucosal Lacerations-gastroesophageal","type":"related"},{"name":"junctions, mucosal Lacerations-gastroesophageal","type":"related"},{"name":"laceration, Mallory-Weiss","type":"related"},{"name":"laceration-hemorrhage, gastroesophageal","type":"related"},{"name":"laceration-hemorrhages, gastroesophageal","type":"related"},{"name":"mucosal Lacerations gastroesophageal junction","type":"related"},{"name":"mucosal Lacerations-gastroesophageal junction","type":"related"},{"name":"mucosal Lacerations-gastroesophageal junctions","type":"related"},{"name":"mucosal lacerations - gastroesophageal junction","type":"related"},{"name":"syndrome, Mallory-Weiss","type":"related"}],"termid":"MONDO:0043247","xrefs":{"Monarch":{"xref_id":"0043247"}}}


id: MOD:01662
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to N5-(ADP-ribosyl)-L-glutamine.","definition_xrefs":["PubMed:20185726","RESID:AA0518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N5-(ADP-ribosyl)-L-glutamine","synonyms":[{"name":"(S)-2-amino-4-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]amino)-5-oxopentanoic acid","type":"exact"},{"name":"N5-(ADP-ribosyl)-L-glutamine","type":"exact"},{"name":"N5-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-glutamine","type":"exact"},{"name":"N5-alpha-D-ribofuranosyl-L-glutamine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"}],"termid":"MOD:01662"}


id: MONDO:0020845
data:
  {"annotated_genes":["SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86770],"is_not":false,"summary":null,"term":"MONDO:0020845"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648331","OMIM:618098","UMLS:C4748184","DOID:0111524"],"synonyms":[{"name":"PEOB5","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 5","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal recessive 5","type":"exact"}],"termid":"MONDO:0020845","terms_by_termid":{"MONDO:0020845":null},"xrefs":{"Monarch":{"xref_id":"0020845"}}}


id: FYPO:0002279
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube that is curved along the long axis, and undergoes a single round of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division, with elongated germ tube","termid":"FYPO:0002409"},{"relation_name":"is_a","term_name":"inviable curved elongated vegetative cell","termid":"FYPO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, with elongated, curved germ tube","synonyms":[{"name":"inviable after spore germination, single cell division, elongated, curved cell","type":"exact"},{"name":"inviable following spore germination, single cell division, with elongated, curved germ tube","type":"exact"},{"name":"inviable germinated spore, single cell division, with elongated, curved germ tube","type":"exact"},{"name":"lethal after spore germination, single cell division, with elongated, curved germ tube","type":"exact"}],"termid":"FYPO:0002279"}


id: PR:Q09778
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A hamartin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15154:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberous sclerosis 1 protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.13","secondary_identifiers":["UniProtKB:Q09778"],"synonyms":[{"name":"SPAC22F3.13","type":"related"},{"name":"Spom972h-TSC1","type":"exact"}],"termid":"PR:Q09778"}


id: PBO:0000592
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CDRE 5'-AGCCTC-3'","termid":"PBO:0000592"}


id: PBO:0072304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 1","termid":"PBO:0072304"}


id: MONDO:0015946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic epidermal disorder (obsolete MONDO:0015946)","secondary_identifiers":["Orphanet:183426"],"synonyms":[{"name":"genetic epidermal disorder","type":"related"}],"termid":"MONDO:0015946","xrefs":{"Monarch":{"xref_id":"0015946"}}}


id: GO:0033943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in (1->3)-beta-D-galactopyranans.","definition_xrefs":["EC:3.2.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-galactosidase activity","termid":"GO:0004565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"galactan 1,3-beta-galactosidase activity","secondary_identifiers":["MetaCyc:3.2.1.145-RXN"],"synonyms":[{"name":"galactan (1,3)-beta-D-galactosidase activity","type":"related"},{"name":"galactan (1->3)-beta-D-galactosidase activity","type":"related"}],"termid":"GO:0033943"}


id: MONDO:0010620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary renal hypouricemia","termid":"MONDO:0009071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hypouricemia, familial renal, due to tubular hypersecretion","secondary_identifiers":["UMLS:C1843972","GARD:15296","MESH:C564405","OMIM:307830","MEDGEN:334869"],"synonyms":[{"name":"hypouricemia, familial renal, due to tubular hypersecretion","type":"exact"}],"termid":"MONDO:0010620","xrefs":{"Monarch":{"xref_id":"0010620"}}}


id: MOD:00720
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively oxygenates an L-methionine residue to L-methionine sulfoxide R-diastereomer.","definition_xrefs":["PubMed:22116028","PubMed:21406390","RESID:AA0581","ChEBI:45764","PubMed:23911929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfoxide","termid":"MOD:00719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine (R)-sulfoxide","synonyms":[{"name":"(2S)-2-amino-4-[(R)-methylsulfinyl]butanoic acid","type":"exact"},{"name":"L-methionine (R)-S-oxide","type":"exact"},{"name":"L-methionine (R)-sulfoxide","type":"exact"},{"name":"MOD_RES Methionine (R)-sulfoxide","type":"exact"},{"name":"R-MetO","type":"exact"}],"termid":"MOD:00720"}


id: GO:0097585
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein dimer complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity and, in S. cerevisiae, is composed of Pmt5p-Pmt3p.","definition_xrefs":["PMID:12551906","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dolichyl-phosphate-mannose-protein mannosyltransferase complex","termid":"GO:0031502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005575","GO:0032991","GO:0005789"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt5p-Pmt3p dimer complex","synonyms":[{"name":"Pmt5p-Pmt3p complex","type":"narrow"}],"termid":"GO:0097585"}


id: PR:P0CH07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubi2 gene.","definition_xrefs":["UniProtKB:P0CH07","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-60S ribosomal protein L40-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.12c","synonyms":[{"name":"SPAC1805.12c","type":"related"},{"name":"Spom972h-ubi2","type":"exact"},{"name":"uep1","type":"related"}],"termid":"PR:P0CH07"}


id: PBO:0044409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily F member 2, pseudogene","termid":"PBO:0044409"}


id: PBO:0029700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_nucleoside_diphosphate_kinase_activity","termid":"PBO:0029700"}


id: MONDO:0002334
data:
  {"annotated_genes":["SJAG_05979","SJAG_03905","SJAG_01349","SJAG_02460","SJAG_01013","SJAG_00980","SJAG_01548","SJAG_03453","SJAG_01008","SJAG_03081","SJAG_01748","SJAG_03424","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87559,87712,87711,87557,87558,87556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[86533,86532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011508"},{"annotations":[86024,86023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018881"},{"annotations":[86074,86075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"},{"annotations":[87678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"Neoplasms of the hematopoietic system, including hematopoietic cell neoplasms (e.g. leukemias, lymphomas) and non-hematopoietic cell neoplasms that can affect the hematopoietic system (e.g. lymph node and splenic sarcomas). --2003","definition_xrefs":["NCIT:C35813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_01008":null,"SJAG_01013":null,"SJAG_01349":null,"SJAG_01548":null,"SJAG_01748":null,"SJAG_02460":null,"SJAG_02527":null,"SJAG_03081":null,"SJAG_03424":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hematopoietic and lymphoid system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:268180","MESH:D019337","DOID:2531","SCTID:129154003","UMLS:C1512393"],"synonyms":[{"name":"blood cancer","type":"narrow"},{"name":"blood neoplasm (disease)","type":"exact"},{"name":"blood tumor","type":"exact"},{"name":"blood tumour","type":"exact"},{"name":"haematological tumours","type":"exact"},{"name":"haematopoietic and lymphoid system tumour","type":"exact"},{"name":"haematopoietic cancer","type":"narrow"},{"name":"haematopoietic neoplasm","type":"broad"},{"name":"haematopoietic neoplasm (morphologic abnormality)","type":"broad"},{"name":"haematopoietic system neoplasm","type":"exact"},{"name":"haematopoietic system tumour","type":"exact"},{"name":"haematopoietic tumours","type":"exact"},{"name":"hematologic cancer","type":"related"},{"name":"hematologic malignancy","type":"narrow"},{"name":"hematologic neoplasm","type":"broad"},{"name":"hematological tumors","type":"exact"},{"name":"hematopoietic and lymphoid system neoplasm","type":"exact"},{"name":"hematopoietic and lymphoid system tumor","type":"exact"},{"name":"hematopoietic cancer","type":"narrow"},{"name":"hematopoietic neoplasm","type":"broad"},{"name":"hematopoietic neoplasm (morphologic abnormality)","type":"broad"},{"name":"hematopoietic system neoplasm","type":"exact"},{"name":"hematopoietic system tumor","type":"exact"},{"name":"hematopoietic tumors","type":"exact"},{"name":"malignant haematopoietic neoplasm","type":"related"},{"name":"malignant haematopoietic neoplasm (morphologic abnormality)","type":"narrow"},{"name":"malignant hematopoietic neoplasm (morphologic abnormality)","type":"narrow"},{"name":"neoplasm of blood","type":"exact"},{"name":"neoplasm of haematopoietic system","type":"exact"},{"name":"neoplasm of hematopoietic system","type":"exact"},{"name":"tumor of blood","type":"exact"},{"name":"tumor of hematopoietic system","type":"exact"},{"name":"tumour of blood","type":"exact"},{"name":"tumour of haematopoietic system","type":"exact"}],"termid":"MONDO:0002334","terms_by_termid":{"MONDO:0007925":null,"MONDO:0009693":null,"MONDO:0011508":null,"MONDO:0018874":null,"MONDO:0018881":null},"xrefs":{"Monarch":{"xref_id":"0002334"}}}


