# terms

id: GO:0006085
data:
  {"annotated_genes":["SJAG_02769","SJAG_02741","SJAG_03064","SJAG_00866","SJAG_03731","SJAG_02006","SJAG_03290","SJAG_01402","SJAG_02158","SJAG_01139","SJAG_03310","SJAG_00982"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93603,98700],"is_not":false,"summary":null,"term":"GO:0006085"},{"annotations":[91779,68856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[117350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[88198,74982,73114,73746,79415,87768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[75466],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_00982":null,"SJAG_01139":null,"SJAG_01402":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03310":null,"SJAG_03731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"acetyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:Acetyl-CoA-Biosynthesis"],"synonyms":[{"name":"acetyl-CoA anabolism","type":"exact"},{"name":"acetyl-CoA biosynthesis","type":"exact"},{"name":"acetyl-CoA formation","type":"exact"},{"name":"acetyl-CoA synthesis","type":"exact"}],"termid":"GO:0006085","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0010510":null,"GO:0019427":null,"GO:1990181":null}}


id: GO:0004320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (9Z)-octadecenoyl-[ACP] + H2O = (9Z)-octadecenoate + H+ + holo-[ACP].","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oleoyl-[acyl-carrier-protein] hydrolase activity (obsolete GO:0004320)","synonyms":[{"name":"oleoyl-ACP hydrolase activity","type":"exact"},{"name":"oleoyl-ACP thioesterase activity","type":"related"},{"name":"oleoyl-[acyl-carrier protein] hydrolase activity","type":"exact"},{"name":"oleoyl-acyl carrier protein thioesterase activity","type":"related"},{"name":"oleoyl-acyl-carrier-protein hydrolase","type":"broad"}],"termid":"GO:0004320"}


id: MONDO:0007758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic skin disorder caused by mutations in the KRT9 gene. It is characterized by hyperkeratosis in the palms and soles resulting in abnormal thickening of the skin in these areas.","definition_xrefs":["NCIT:C84693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"palmoplantar keratoderma, epidermolytic","termid":"MONDO:0968949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolytic palmoplantar keratoderma, 1","secondary_identifiers":["DOID:0070552","Orphanet:2199","SCTID:399955009","GARD:2826","OMIM:144200","ICD9:757.39"],"synonyms":[{"name":"EPPK","type":"exact"},{"name":"Ppke","type":"related"},{"name":"diffuse erythrodermic palmoplantar keratoderma, VC6rner type","type":"exact"},{"name":"diffuse erythrodermic palmoplantar keratoderma, Voerner type","type":"exact"},{"name":"diffuse erythrodermic palmoplantar keratoderma, Vörner type","type":"related"},{"name":"epidermolytic palmoplantar keratoderma of VC6rner","type":"exact"},{"name":"epidermolytic palmoplantar keratoderma of Voerner","type":"exact"},{"name":"epidermolytic palmoplantar keratoderma of Vörner","type":"related"},{"name":"hyperkeratosis palmoplantar localised epidermolytic","type":"related"},{"name":"hyperkeratosis palmoplantar localized epidermolytic","type":"related"},{"name":"hyperkeratosis, localised epidermolytic","type":"related"},{"name":"hyperkeratosis, localized epidermolytic","type":"related"},{"name":"keratoderma, epidermolytic palmoplantar","type":"related"},{"name":"keratosis of Greither","type":"related"},{"name":"keratosis palmaris Et plantaris Familiaris","type":"related"},{"name":"palmoplantar keratoderma, Vorner type","type":"related"},{"name":"palmoplantar keratoderma, epidermolytic","type":"related"},{"name":"palmoplantar keratoderma, epidermolytic, with knuckle pads","type":"related"},{"name":"tylosis","type":"related"}],"termid":"MONDO:0007758","xrefs":{"Monarch":{"xref_id":"0007758"}}}


id: GO:1902786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dodecane stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","GOC:mengo_curators","PMID:23826995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dodecane","termid":"GO:1902786"}


id: MONDO:0013372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any long QT syndrome in which the cause of the disease is a mutation in the KCNE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 5","secondary_identifiers":["DOID:0110647","NCIT:C172094","MESH:C566766","MEDGEN:358092","GARD:10433","OMIM:613695","HGNC:6240","UMLS:C1867904"],"synonyms":[{"name":"KCNE1 long QT syndrome","type":"exact"},{"name":"LQT5","type":"exact"},{"name":"long QT syndrome 2/5, digenic","type":"related"},{"name":"long QT syndrome 5","type":"exact"},{"name":"long QT syndrome 5, acquired, susceptibility to","type":"related"},{"name":"long QT syndrome caused by mutation in KCNE1","type":"exact"},{"name":"long QT syndrome type 5","type":"exact"}],"termid":"MONDO:0013372","xrefs":{"Monarch":{"xref_id":"0013372"}}}


id: GO:0045677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of R7cell differentiation.","definition_xrefs":["GOC:dph","GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R7 cell differentiation","termid":"GO:0045676"},{"relation_name":"is_a","term_name":"negative regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110118"},{"relation_name":"negatively_regulates","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of R7 cell differentiation","synonyms":[{"name":"down regulation of R7 differentiation","type":"exact"},{"name":"down-regulation of R7 differentiation","type":"exact"},{"name":"downregulation of R7 differentiation","type":"exact"},{"name":"inhibition of R7 differentiation","type":"narrow"},{"name":"negative regulation of R7 differentiation","type":"exact"}],"termid":"GO:0045677"}


id: MONDO:0005532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Crohn's disease affecting the colon.","definition_xrefs":["NCIT:C35211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Crohn disease","termid":"MONDO:0005011"},{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"Crohn's colitis","secondary_identifiers":["NANDO:1200446","UMLS:C0156147","EFO:0005622","MEDGEN:57618","ICD9:555.1","DOID:0060192"],"synonyms":[{"name":"Crohn colitis","type":"exact"}],"termid":"MONDO:0005532","xrefs":{"Monarch":{"xref_id":"0005532"}}}


id: GO:0090262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the nucleotide-excision repair process that carries out preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the global genome nucleotide excision repair pathway.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide-excision repair","termid":"GO:2000819"},{"relation_name":"regulates","term_name":"transcription-coupled nucleotide-excision repair","termid":"GO:0006283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"regulation of transcription-coupled nucleotide-excision repair","termid":"GO:0090262"}


id: PBO:0047106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 156 member A","termid":"PBO:0047106"}


id: PATO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000335 variegated (obsolete PATO:0000335)","synonyms":[{"name":"mottled (sensu Drosophila)","type":"related"}],"termid":"PATO:0000335"}


id: GO:0018317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of a carbon atom of a peptidyl-tryptophan residue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein C-linked glycosylation","termid":"GO:0018103"},{"relation_name":"is_a","term_name":"peptidyl-tryptophan modification","termid":"GO:0018211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein C-linked glycosylation via tryptophan","synonyms":[{"name":"protein amino acid C-linked glycosylation via tryptophan","type":"exact"}],"termid":"GO:0018317"}


id: MONDO:0004454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital mesoblastic nephroma characterized by increased cellularity, sheet-like proliferation of fibroblastic cells, and increased mitotic activity. Necrotic changes are commonly present.","definition_xrefs":["NCIT:C39815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mesoblastic nephroma","termid":"MONDO:0017043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"cellular congenital mesoblastic nephroma","secondary_identifiers":["MEDGEN:729112","UMLS:C1320471","DOID:8082"],"synonyms":[{"name":"cellular congenital mesoblastic nephroma","type":"exact"}],"termid":"MONDO:0004454","xrefs":{"Monarch":{"xref_id":"0004454"}}}


id: PBO:0082662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the cleavage and polyadenylation factor I (CF I); CF 1, composed of the CF 1A complex (Rna14p, Rna15p, Clp1p, Pcf11p) and Hrp1, is involved in cleavage and polyadenylation of mRNA 3' ends; interacts with the A-rich polyadenylation signal in complex with Rna14p and Hrp1p; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; required for gene looping and maintenance of genome stability","termid":"PBO:0082662"}


id: MONDO:0015342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute transverse myelitis (ATM) is an inflammatory demyelinating disorder of the spinal cord that can be either idiopathic (IATM) or secondary to a known cause (SATM).","definition_xrefs":["Orphanet:139417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelitis","termid":"MONDO:0002565"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute transverse myelitis","secondary_identifiers":["ICD9:323.9","UMLS:C0270627","ICD9:341.20","MEDGEN:82847","NCIT:C128378","SCTID:47000000","MESH:D009188","GARD:19913"],"termid":"MONDO:0015342","xrefs":{"Monarch":{"xref_id":"0015342"}}}


id: MONDO:1010724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phenylketonuria that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylketonuria, non-human animal","termid":"MONDO:1010114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylketonuria, pig","secondary_identifiers":["OMIA:002293-9823"],"termid":"MONDO:1010724","xrefs":{"Monarch":{"xref_id":"1010724"}}}


id: MONDO:0017691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"galactose epimerase deficiency","termid":"MONDO:0009257"},{"relation_name":"is_a","term_name":"disorder of galactose and fructose metabolism","termid":"MONDO:0800152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"erythrocyte galactose epimerase deficiency","secondary_identifiers":["Orphanet:308473","GARD:17392","MEDGEN:657805","UMLS:C0574090","SCTID:297238008"],"synonyms":[{"name":"erythrocyte GALE deficiency","type":"exact"},{"name":"erythrocyte GALE-D","type":"exact"},{"name":"erythrocyte UDP-galactose-4-epimerase deficiency","type":"exact"},{"name":"erythrocyte epimerase deficiency galactosemia","type":"exact"},{"name":"erythrocyte uridine diphosphate galactose-4-epimerase deficiency","type":"exact"}],"termid":"MONDO:0017691","xrefs":{"Monarch":{"xref_id":"0017691"}}}


id: PBO:0068095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 402","termid":"PBO:0068095"}


id: MONDO:0017573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"46,XX disorder of sex development-anorectal anomalies syndrome is a rare developmental defect during embryogenesis syndrome characterized by a normal female karyotype, normal ovaries, male or ambiguous genitalia, urinary tract malformations (ranging from bilateral renal agenesis to mild unilateral hydronephrosis), müllerian duct anomalies (e.g. complete absence of the uterus and vagina, bicornuate uterus), and imperforate anus. Additional features may include tracheoesophageal fistula, radial aplasia, and malrotation of the gut.","definition_xrefs":["Orphanet:2973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"46,XX disorder of sex development","termid":"MONDO:0017576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,XX disorder of sex development-anorectal anomalies syndrome","secondary_identifiers":["MEDGEN:1382292","GARD:18782","UMLS:C4518078"],"synonyms":[{"name":"female pseudohermaphroditism-anorectal anomalies syndrome","type":"exact"}],"termid":"MONDO:0017573","xrefs":{"Monarch":{"xref_id":"0017573"}}}


id: PBO:0034335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-obsolete_has_direct_output_(obsolete_RO:0002402)","termid":"PBO:0034335"}


id: MONDO:0020095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant form of disease with focal palmoplantar keratoderma as a major feature.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant disease associated with focal palmoplantar keratoderma as a major feature (obsolete MONDO:0020095)","secondary_identifiers":["Orphanet:98353"],"synonyms":[{"name":"autosomal dominant disease associated with focal palmoplantar hyperkeratosis as a major feature","type":"exact"},{"name":"autosomal dominant disease with focal palmoplantar keratoderma as a major feature","type":"exact"},{"name":"disease with focal palmoplantar keratoderma as a major feature, autosomal dominant","type":"exact"}],"termid":"MONDO:0020095","xrefs":{"Monarch":{"xref_id":"0020095"}}}


id: PBO:0074806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13 pseudogene 1","termid":"PBO:0074806"}


id: SO:0001647
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of ribosome entry site, specific to Eukaryotic organisms that overlaps part of both 5' UTR and CDS sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome_entry_site","termid":"SO:0000139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kozak_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Kozak_consensus_sequence"],"synonyms":[{"name":"kozak consensus","type":"exact"},{"name":"kozak consensus sequence","type":"exact"},{"name":"kozak sequence","type":"exact"}],"termid":"SO:0001647"}


id: PBO:0054107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1472","termid":"PBO:0054107"}


id: MONDO:0100394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(1;22). (A cytogenetic abnormality that involves a translocation between chromosomes 1 and 22.)","definition_xrefs":["NCIT:C175584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, t(1;22)","synonyms":[{"name":"AML, t(1;22)","type":"exact"}],"termid":"MONDO:0100394","xrefs":{"Monarch":{"xref_id":"0100394"}}}


id: GO:0015543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: glucose or lactose(in) = glucose or lactose(out).","definition_xrefs":["TC:2.A.1.20.2"],"gene_count":0,"genotype_count":0,"name":"obsolete lactose/glucose efflux transporter activity (obsolete GO:0015543)","synonyms":[{"name":"lactose/glucose efflux transporter activity","type":"exact"}],"termid":"GO:0015543"}


id: PBO:0011408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_has_output","termid":"PBO:0011408"}


id: PBO:0109398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 25, pseudogene","termid":"PBO:0109398"}


id: PBO:0067100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 141, pseudogene","termid":"PBO:0067100"}


id: GO:0005532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mannose binding lectin (obsolete GO:0005532)","synonyms":[{"name":"mannose binding lectin","type":"exact"},{"name":"mannose receptor","type":"related"}],"termid":"GO:0005532"}


id: PBO:0063550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penta-EF-hand domain containing 1","termid":"PBO:0063550"}


id: PBO:0070411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPA3 pseudogene 1","termid":"PBO:0070411"}


id: PBO:0061917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 5","termid":"PBO:0061917"}


id: PBO:0075125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaphilin","termid":"PBO:0075125"}


id: PBO:0017468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-formed_as_result_of","termid":"PBO:0017468"}


id: GO:0034538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-methylsalicylaldehyde + NAD+ = 3-methylsalicylate + NADH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-methylsalicylaldehyde dehydrogenase activity (obsolete GO:0034538)","termid":"GO:0034538"}


id: PBO:0073456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant associated 2","termid":"PBO:0073456"}


id: GO:0005080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to protein kinase C.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"protein kinase C binding","secondary_identifiers":["GO:0072568","GO:0072569","GO:0097024"],"synonyms":[{"name":"PKC alpha binding","type":"exact"},{"name":"PKC binding","type":"exact"},{"name":"PKC delta binding","type":"exact"},{"name":"PKC eta binding","type":"exact"},{"name":"protein kinase C alpha binding","type":"narrow"},{"name":"protein kinase C delta binding","type":"narrow"},{"name":"protein kinase C eta binding","type":"narrow"}],"termid":"GO:0005080"}


id: PBO:0051537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 5","termid":"PBO:0051537"}


id: PBO:0080337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 101 pseudogene","termid":"PBO:0080337"}


id: GO:0014844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of myoblasts, resulting in the expansion of the cell population. This occurs as part of skeletal muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","PMID:16607119","CL:0000056","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast proliferation","termid":"GO:0051450"},{"relation_name":"part_of","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast proliferation involved in skeletal muscle regeneration","termid":"GO:0014844"}


id: PBO:0029916
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_ergosterol_level","termid":"PBO:0029916"}


id: MONDO:0005148
data:
  {"annotated_genes":["SJAG_02013","SJAG_02000","SJAG_04495","SJAG_02426","SJAG_02012","SJAG_04206","SJAG_04394","SJAG_04334","SJAG_00214","SJAG_00092"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85490,85491,85492,85493,85494,87619,87620,87621],"is_not":false,"summary":null,"term":"MONDO:0005148"},{"annotations":[87694,87693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014488"}]},"cv_name":"mondo","definition":"A type of diabetes mellitus that is characterized by insulin resistance or desensitization and increased blood glucose levels. This is a chronic disease that can develop gradually over the life of a patient and can be linked to both environmental factors and heredity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus","termid":"MONDO:0005015"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00092":null,"SJAG_00214":null,"SJAG_02000":null,"SJAG_02012":null,"SJAG_02013":null,"SJAG_02426":null,"SJAG_04206":null,"SJAG_04334":null,"SJAG_04394":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005015","MONDO:0005066"],"is_obsolete":false,"name":"type 2 diabetes mellitus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C26747","DOID:9352","MESH:D003924","NANDO:2200461","OMIM:125853","UMLS:C0011860","icd11.foundation:119724091","MEDGEN:41523","SCTID:44054006"],"synonyms":[{"name":"NIDDM","type":"exact"},{"name":"T2D","type":"exact"},{"name":"T2DM","type":"exact"},{"name":"T2DM - type 2 diabetes mellitus","type":"exact"},{"name":"adult onset diabetes","type":"exact"},{"name":"adult-onset diabetes","type":"exact"},{"name":"diabetes mellitis type 2","type":"exact"},{"name":"diabetes mellitis type II","type":"exact"},{"name":"diabetes mellitus, non-insulin-dependent, susceptibility to","type":"related"},{"name":"diabetes mellitus, noninsulin-dependent","type":"exact"},{"name":"diabetes mellitus, noninsulin-dependent, 2","type":"narrow"},{"name":"diabetes mellitus, noninsulin-dependent, association with","type":"exact"},{"name":"diabetes mellitus, noninsulin-dependent, late onset","type":"exact"},{"name":"diabetes mellitus, noninsulin-dependent, susceptibility to","type":"related"},{"name":"diabetes mellitus, type 2","type":"exact"},{"name":"diabetes mellitus, type 2, protection against","type":"related"},{"name":"diabetes mellitus, type 2, susceptibility to","type":"related"},{"name":"diabetes mellitus, type II","type":"exact"},{"name":"diabetes mellitus, type II, susceptibility to","type":"related"},{"name":"diabetes, type 2","type":"exact"},{"name":"hypertension, insulin resistance-related, susceptibility to","type":"related"},{"name":"insulin resistance, severe, digenic","type":"exact"},{"name":"insulin resistance, susceptibility to","type":"related"},{"name":"maturity-onset diabetes","type":"related"},{"name":"non-insulin dependent diabetes","type":"exact"},{"name":"non-insulin dependent diabetes mellitus","type":"exact"},{"name":"non-insulin-dependent diabetes mellitus","type":"exact"},{"name":"noninsulin dependent diabetes","type":"exact"},{"name":"noninsulin-dependent diabetes mellitus","type":"exact"},{"name":"type 2 diabetes","type":"exact"},{"name":"type 2 diabetes mellitus","type":"exact"},{"name":"type 2 diabetes mellitus non-insulin dependent","type":"exact"},{"name":"type 2 diabetes mellitus, susceptibility to","type":"related"},{"name":"type II diabetes","type":"exact"},{"name":"type II diabetes mellitus","type":"exact"}],"termid":"MONDO:0005148","terms_by_termid":{"MONDO:0005148":null,"MONDO:0014488":null},"xrefs":{"Monarch":{"xref_id":"0005148"}}}


id: PBO:0082445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bud tip localized protein of unknown function; mRNA is targeted to the bud by a She2p dependent transport system; mRNA is cell cycle regulated via Fkh2p, peaking in G2/M phase; null mutant displays increased levels of spontaneous Rad52p foc","termid":"PBO:0082445"}


id: GO:0044500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant decrease of the force with which blood travels through the circulatory system of the bitten/stung organism.","definition_xrefs":["GOC:fj","PMID:19837656","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete venom-mediated decrease in blood pressure in another organism (obsolete GO:0044500)","synonyms":[{"name":"envenomation resulting in negative regulation of blood pressure in another organism","type":"exact"},{"name":"envenomation resulting in negative regulation of blood pressure in other organism","type":"exact"},{"name":"hypotensive activity in other organism","type":"exact"}],"termid":"GO:0044500"}


id: PBO:0064108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting","termid":"PBO:0064108"}


id: PBO:0052220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily V member 1","termid":"PBO:0052220"}


id: PBO:0081570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF496 divergent transcript","termid":"PBO:0081570"}


id: GO:1903401
data:
  {"annotated_genes":["SJAG_03256","SJAG_02029","SJAG_04725","SJAG_04637","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[103115,104149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[97683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[110334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of L-lysine across a membrane.","definition_xrefs":["GOC:krc","PMID:8195186","GO_REF:0000069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine transport","termid":"GO:1902022"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"L-lysine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903401","terms_by_termid":{"GO:0089707":null,"GO:0090517":null,"GO:0097639":null,"GO:1901482":null}}


id: PBO:0054649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2054","termid":"PBO:0054649"}


id: PBO:0068498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 83, pseudogene","termid":"PBO:0068498"}


id: PBO:0080025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 11","termid":"PBO:0080025"}


id: MONDO:0016162
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012399"}]},"cv_name":"mondo","definition":"Bilateral frontal polymicrogyria is one of the rarest subtypes of polymicrogyria. It is a symmetric and bilateral form (in both brain hemispheres) that only involves the frontal lobes without including the area located behind the Sylvius fissure or the area located behind the Rolando sulcus. Some researchers classify the condition into two different forms: bilateral frontal polymicrogyriaand the bilateral frontoparietal. Signs and symptoms included delayed motor and language milestones; spastic (stiffness) hemiparesis (weakness in one side of the body) or quadriparesis (weakness in all four limbs of the body); and mild to moderate intellectual disability. Seizures mayalsobe present. The frontoparietal form is caused by changes (mutations) in the GPR56 gene but the cause for the frontal form of polymicrogyira is still not known. Treatment is based on the signs and symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral polymicrogyria","termid":"MONDO:0017091"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"bilateral frontal polymicrogyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080921","icd11.foundation:688947844","Orphanet:208444","UMLS:C5437679","GARD:10783","MEDGEN:1754014"],"termid":"MONDO:0016162","terms_by_termid":{"MONDO:0012399":null},"xrefs":{"Monarch":{"xref_id":"0016162"}}}


id: MONDO:0010196
data:
  {"annotated_genes":["SJAG_03898"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87193],"is_not":false,"summary":null,"term":"MONDO:0010196"}]},"cv_name":"mondo","definition":"A rare inherited syndrome characterized by premature aging with onset in the third decade of life and with cardinal clinical features including bilateral cataracts, short stature, graying and thinning of scalp hair, characteristic skin disorders and premature onset of additional age-related disorders.","definition_xrefs":["Orphanet:902"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"hereditary poikiloderma","termid":"MONDO:0016382"},{"relation_name":"excluded_subClassOf","term_name":"premature aging syndrome","termid":"MONDO:0019303"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"progeroid syndrome","termid":"MONDO:0015333"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019303"],"is_obsolete":false,"name":"Werner syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200676","DOID:5688","NORD:1845","MESH:D014898","GARD:7885","ICD9:259.8","MedDRA:10049429","NANDO:2200831","icd11.foundation:1864550134","NCIT:C3447","OMIM:277700","SCTID:51626007","MEDGEN:12147","UMLS:C0043119"],"synonyms":[{"name":"WRN","type":"related"},{"name":"WS","type":"exact"},{"name":"Werner syndrome","type":"exact"},{"name":"Werner's syndrome","type":"exact"},{"name":"adult premature ageing syndrome","type":"exact"},{"name":"adult premature aging syndrome","type":"exact"},{"name":"adult progeria","type":"exact"}],"termid":"MONDO:0010196","terms_by_termid":{"MONDO:0010196":null},"xrefs":{"Monarch":{"xref_id":"0010196"}}}


id: GO:1904280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription mediated by RNA polymerase V.","definition_xrefs":["PMID:24726328","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase V","termid":"GO:1904279"},{"relation_name":"negatively_regulates","term_name":"transcription by RNA polymerase V","termid":"GO:0001060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription by RNA polymerase V","synonyms":[{"name":"down regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"down regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"down-regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"downregulation of transcription from RNA pol V promoter","type":"exact"},{"name":"downregulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"inhibition of transcription from RNA pol V promoter","type":"narrow"},{"name":"inhibition of transcription from RNA polymerase V promoter","type":"narrow"},{"name":"negative regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:1904280"}


id: PBO:0071502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 5","termid":"PBO:0071502"}


id: GO:0021925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to Purkinje cells. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem.","definition_xrefs":["GOC:cls","GOC:dgh","GO_REF:0000021","GOC:jid","GOC:dph","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell precursor proliferation","termid":"GO:0021925"}


id: GO:0097013
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a phagocytic vesicle.","definition_xrefs":["GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle lumen","termid":"GO:0071682"},{"relation_name":"part_of","term_name":"phagocytic vesicle","termid":"GO:0045335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"phagocytic vesicle lumen","termid":"GO:0097013"}


id: PBO:0003226
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Functional Homologue of Nce102","termid":"PBO:0003226"}


id: MONDO:0010055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal muscular atrophy with microcephaly and mental subnormality","secondary_identifiers":["MESH:C564806","OMIM:271110","UMLS:C5935682","MEDGEN:1856346"],"synonyms":[{"name":"spinal muscular atrophy with microcephaly and mental subnormality","type":"exact"}],"termid":"MONDO:0010055","xrefs":{"Monarch":{"xref_id":"0010055"}}}


id: GO:1901710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of homoserine biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"homoserine biosynthetic process","termid":"GO:0009090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of homoserine biosynthetic process","synonyms":[{"name":"regulation of homoserine anabolism","type":"exact"},{"name":"regulation of homoserine biosynthesis","type":"exact"},{"name":"regulation of homoserine formation","type":"exact"},{"name":"regulation of homoserine synthesis","type":"exact"}],"termid":"GO:1901710"}


id: PBO:0113220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein; binds to the 3'UTR of cell wall-related mRNAs and stabilizes these mRNAs, acting in parallel to cell wall integrity signaling to maintain expression of cell wall genes during stress; acts antagonistically to Nab6p; deletion mutants display increased sensitivity to some cell wall disrupting agents; expression negatively regulated by cAMP","termid":"PBO:0113220"}


id: MONDO:0020020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete visceral malformation of the liver, biliary tract, pancreas or spleen (obsolete MONDO:0020020)","secondary_identifiers":["Orphanet:98041"],"termid":"MONDO:0020020","xrefs":{"Monarch":{"xref_id":"0020020"}}}


id: PBO:0089278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L2","termid":"PBO:0089278"}


id: FYPO:0006914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing terconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on terconazole","synonyms":[{"name":"normal cell population growth in presence of terconazole","type":"exact"},{"name":"normal cell population growth on terconazole","type":"exact"},{"name":"normal cellular response to terconazole","type":"related"},{"name":"normal vegetative cell population growth on terconazole","type":"exact"}],"termid":"FYPO:0006914"}


id: GO:0032614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-11 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-11 production","secondary_identifiers":["GO:0072609","GO:0042230"],"synonyms":[{"name":"IL-11 production","type":"exact"},{"name":"interleukin-11 biosynthetic process","type":"narrow"},{"name":"interleukin-11 secretion","type":"narrow"}],"termid":"GO:0032614"}


id: MONDO:0020397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parachute tricuspid valve is a rare congenital heart malformation defined as an insertion of the chordal apparatus into a single papillary muscle or a muscle group, making a pathognomonic 'pear' shape sign in the four-chamber echocardiographic view with the atrium forming the larger base of the pear and the leaflets the apex. Isolated parachute tricuspid valve may be asymptomatic or present with symptoms of tricuspid stenosis (diastolic inspiratory murmur, pulsation of jugular veins, hepatomegaly, edema, epigastric discomfort, right atrial enlargement, right ventricular hypertrophy, electrocardiography abnormalities). It may also be associated with other heart malformations and present with symptoms of the complex of malformations.","definition_xrefs":["Orphanet:99056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"parachute tricuspid valve","secondary_identifiers":["UMLS:C0344755","GARD:19624","MEDGEN:576478"],"termid":"MONDO:0020397","xrefs":{"Monarch":{"xref_id":"0020397"}}}


id: SO:0001662
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TATA box core promoter of a gene transcribed by RNA polymerase III.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TATA_box","termid":"SO:0000174"},{"relation_name":"part_of","term_name":"RNApol_III_promoter","termid":"SO:0000171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_polymerase_III_TATA_box","synonyms":[{"name":"RNA polymerase III TATA box","type":"exact"}],"termid":"SO:0001662"}


id: PBO:0091973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase Gut2","termid":"PBO:0091973"}


id: MONDO:0008665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ptosis-vocal cord paralysis syndrome is a rare, hereditary disorder with ptosis characterized by the combination of congenital bilateral recurrent laryngeal nerve paralysis and congenital bilateral ptosis. There have been no further descriptions in the literature since 1983.","definition_xrefs":["Orphanet:2997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ptosis-vocal cord paralysis syndrome","secondary_identifiers":["UMLS:C1860403","MESH:C536923","GARD:427","MEDGEN:349807","OMIM:193240"],"synonyms":[{"name":"congenital bilateral recurrent nerve paralysis and ptosis","type":"related"},{"name":"ptosis vocal cord paralysis","type":"related"},{"name":"tucker syndrome","type":"exact"},{"name":"vocal cord paralysis and ptosis","type":"related"}],"termid":"MONDO:0008665","xrefs":{"Monarch":{"xref_id":"0008665"}}}


id: MOD:01122
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'phos dCytidinyl","termid":"MOD:01122"}


id: GO:0051842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process, either active or passive, by which an organism avoids the effects of the symbiont organism's immune response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mb"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance of symbiont immune response (obsolete GO:0051842)","synonyms":[{"name":"evasion or tolerance of symbiont immune response","type":"exact"},{"name":"immune evasion","type":"broad"}],"termid":"GO:0051842"}


id: PBO:0017546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase, URM1 activating enzyme E1-type Uba42 (predicted)","termid":"PBO:0017546"}


id: GO:0044489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["GOC:jl","PMID:21781281","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of voltage-gated sodium channel activity in another organism (obsolete GO:0044489)","synonyms":[{"name":"negative regulation of voltage-gated sodium channel activity in other organism","type":"exact"}],"termid":"GO:0044489"}


id: MONDO:0015046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gamma-heavy chain disease (gamma-HCD) is a type of HCD characterized by the production of incomplete monoclonal gamma-heavy chains without associated light chains. The clinical presentation most commonly resembles that of patients with systemic lymphoproliferative/autoimmune diseases.","definition_xrefs":["Orphanet:100026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heavy chain disease","termid":"MONDO:0019464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"gamma-heavy chain disease","secondary_identifiers":["GARD:10346","UMLS:C0018854","SCTID:109984001","MEDGEN:42374","NCIT:C3083","ICD9:273.2","icd11.foundation:705015637","DOID:0060127"],"synonyms":[{"name":"Franklin disease","type":"exact"},{"name":"Franklin's disease","type":"exact"},{"name":"gamma heavy chain disease","type":"exact"},{"name":"gamma-HCD","type":"exact"}],"termid":"MONDO:0015046","xrefs":{"Monarch":{"xref_id":"0015046"}}}


id: FYPO:0006935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has normal volume, dimensions and shape, and is viable, when subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal cell morphology during nitrogen starvation","termid":"FYPO:0002048"},{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"normal cell morphology during nitrogen starvation","termid":"FYPO:0002048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0000257"],"is_obsolete":false,"name":"viable cell with normal cell morphology during nitrogen starvation","synonyms":[{"name":"small viable spherical cell during nitrogen starvation","type":"exact"},{"name":"viable cell with normal cell morphology during nitrogen depletion","type":"exact"},{"name":"viable cell with normal cell morphology during nitrogen deprivation","type":"exact"},{"name":"viable cell with normal cell shape and size during nitrogen starvation","type":"exact"},{"name":"viable cell with normal morphology during nitrogen starvation","type":"exact"},{"name":"viable orb during nitrogen starvation","type":"exact"},{"name":"viable round cells during nitrogen starvation","type":"related"},{"name":"viable rounded cell during nitrogen starvation","type":"related"},{"name":"viable rounded cells during nitrogen starvation","type":"related"},{"name":"viable spherical cell during nitrogen depletion","type":"exact"},{"name":"viable spherical cell during nitrogen deprivation","type":"exact"},{"name":"viable spherical cell during nitrogen starvation","type":"exact"},{"name":"viable spheroid cell during nitrogen depletion","type":"related"},{"name":"viable spheroid cell during nitrogen deprivation","type":"related"},{"name":"viable spheroid cell during nitrogen starvation","type":"related"}],"termid":"FYPO:0006935"}


id: PBO:0036190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_phosphorylation_during_vegetative_growth","termid":"PBO:0036190"}


id: PBO:0053197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LETM1 domain containing 1","termid":"PBO:0053197"}


id: GO:0072210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a nephron in the metanephros over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron development","secondary_identifiers":["Reactome:R-HSA-9831926"],"termid":"GO:0072210"}


id: PBO:0070300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 6","termid":"PBO:0070300"}


id: MOD:01267
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:271#K","PubMed:11746907","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addition to cytopiloyne+H2O","termid":"MOD:00591"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O - site K","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:01267"}


id: PBO:0050317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 19","termid":"PBO:0050317"}


id: PBO:0048559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF family receptor alpha 4","termid":"PBO:0048559"}


id: RO:0002212
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) negatively regulates process(P2) iff: P1 terminates P2, or P1 descreases the the frequency of initiation of P2 or the magnitude or rate of output of P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulates","termid":"RO:0002211"},{"relation_name":"is_a","term_name":"causally_upstream_of,_negative_effect","termid":"RO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulates","termid":"RO:0002212"}


id: FYPO:0005965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of lithium ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lithium import","termid":"FYPO:0005964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased lithium import","synonyms":[{"name":"decreased cellular lithium import","type":"exact"},{"name":"decreased lithium import during mitotic cell cycle","type":"related"},{"name":"decreased lithium import during vegetative growth","type":"exact"},{"name":"decreased lithium import into cell","type":"exact"},{"name":"decreased lithium ion import","type":"exact"},{"name":"reduced lithium import","type":"exact"}],"termid":"FYPO:0005965"}


id: PBO:0066374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDM1 pseudogene 1","termid":"PBO:0066374"}


id: PBO:0042149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 8","termid":"PBO:0042149"}


id: GO:0033097
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround an amyloplast and form the amyloplast envelope.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"amyloplast envelope","termid":"GO:0033096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"amyloplast membrane","termid":"GO:0033097"}


id: PBO:0090531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Rossman fold DUF1776 family protein","termid":"PBO:0090531"}


id: GO:0001066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a single subunit type plastid RNA polymerase specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH","PMID:20701995"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid single subunit type RNA polymerase activity (obsolete GO:0001066)","termid":"GO:0001066"}


id: GO:0090395
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection that is a short, rounded projection from a plant epidermal cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"plant cell papilla","termid":"GO:0090395"}


id: MONDO:0009303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disease that affects the lungs and kidneys and is characterized by pulmonary alveolar hemorrhage (bleeding in the lungs) and a kidney disease known as glomerulonephritis. Some use the term 'Goodpasture syndrome' for the findings of glomerulonephritis and pulmonary hemorrhage and the term 'Goodpasture disease' for those patients with glomerulonephritis, pulmonary hemorrhage, and anti-GBM antibodies. Currently, the preferred term for both conditions is “ anti-GBM antibody disease ”. Circulating antibodies are directed against the collagen of the part of the kidney known as the glomerular basement membrane (GBM), resulting in acute or rapidly progressive glomerulonephritis. Antibodies also attack the collagen of the air sacs of the lung (alveoli) resulting in bleeding of the lung (pulmonary hemorrhage). Symptoms may include general body discomfort or pain, bleeding from the nose and/or blood in the urine, respiratory problems, anemia, chest pain, and kidney failure. Anti-GBM disease is thought to result from an environmental insult (smoking, infections, exposure to certain drugs) in a person with genetic susceptibility, such as a specific human leukocyte antigen (HLA) type. Diagnosis is confirmed with the presence of anti-GBM antibody in the blood or in the kidney. The treatment of choice is plasmapheresis in conjunction with prednisone and cyclophosphamide.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete predominantly small-vessel vasculitis (obsolete MONDO:0015490)","termid":"MONDO:0015490"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary interstitial lung disease in childhood and adulthood associated with a systemic disease (obsolete MONDO:0017035)","termid":"MONDO:0017035"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"anti-glomerular basement membrane disease","secondary_identifiers":["NANDO:1200718","icd11.foundation:591736785","ICD9:446.21","NORD:1198","NANDO:2200125","ICD10EXP:N08.5*","EFO:0007290","SCTID:236432001","Orphanet:375","ICD10EXP:M31.0+","UMLS:C0403529","NCIT:C84566","MESH:D019867","MedDRA:10018620","OMIM:233450","NANDO:1200717","GARD:2551","MEDGEN:140788","DOID:9808"],"synonyms":[{"name":"Goodpasture Syndrome","type":"exact"},{"name":"Goodpasture syndrome","type":"exact"},{"name":"anti-GBM syndrome","type":"exact"},{"name":"anti-glomerular basement membrane antibody disease","type":"related"},{"name":"anti-glomerular basement membrane disease","type":"exact"},{"name":"glomerulonephritis - pulmonary haemorrhage","type":"related"},{"name":"glomerulonephritis - pulmonary hemorrhage","type":"related"},{"name":"pulmonary renal syndrome","type":"related"},{"name":"rapidly progressive glomerulonephritis with pulmonary haemorrhage","type":"related"},{"name":"rapidly progressive glomerulonephritis with pulmonary hemorrhage","type":"related"}],"termid":"MONDO:0009303","xrefs":{"Monarch":{"xref_id":"0009303"}}}


id: PBO:0058754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6878","termid":"PBO:0058754"}


id: PR:O42914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- oga1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16A3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.08c","synonyms":[{"name":"Spom972h-oga1","type":"exact"}],"termid":"PR:O42914"}


id: PBO:0062513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily J member 2 (gene/pseudogene)","termid":"PBO:0062513"}


id: PBO:0017466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-genomically_related_to","termid":"PBO:0017466"}


id: MONDO:0008002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial congenital mirror movements in which the cause of the disease is a mutation in the DCC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial congenital mirror movements","termid":"MONDO:0016558"},{"relation_name":"is_a","term_name":"mirror movements 1 and/or agenesis of the corpus callosum","termid":"MONDO:0100515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"mirror movements 1","secondary_identifiers":["UMLS:C1834870","MEDGEN:320461","GARD:15086","OMIM:157600"],"synonyms":[{"name":"DCC familial congenital mirror movements","type":"exact"},{"name":"MRMV1","type":"related"},{"name":"bimanual synergia","type":"related"},{"name":"familial congenital mirror movements caused by mutation in DCC","type":"exact"},{"name":"mirror movements 1","type":"exact"},{"name":"mirror movements 1 and/Or agenesis of the corpus callosum","type":"related"},{"name":"mirror movements type 1","type":"exact"},{"name":"mirror movements, congenital","type":"related"}],"termid":"MONDO:0008002","xrefs":{"Monarch":{"xref_id":"0008002"}}}


id: PBO:0042309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule pseudogene 3","termid":"PBO:0042309"}


id: PBO:0067316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 402, pseudogene","termid":"PBO:0067316"}


id: GO:0031942
data:
  {"annotated_genes":["SJAG_01816","SJAG_00354"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77569,119031],"is_not":false,"summary":null,"term":"GO:0031942"}]},"cv_name":"cellular_component","definition":"Protease complex of the mitochondrial inner membrane whose catalytic residues lie on the intermembrane space side of the inner membrane; involved in mitochondrial protein turnover. Contains a subunit belonging to the AAA family of ATP-dependent metalloproteases.","definition_xrefs":["PMID:16267274","PMID:16247555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00354":null,"SJAG_01816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005739"],"is_obsolete":false,"name":"i-AAA complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031942","terms_by_termid":{"GO:0031942":null}}


id: FYPO:0004500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the rate or occurrence of DNA polymerase processivity factor activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA polymerase processivity factor activity","termid":"FYPO:0004499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased DNA polymerase processivity factor activity","synonyms":[{"name":"reduced DNA polymerase processivity factor activity","type":"exact"}],"termid":"FYPO:0004500"}


id: MONDO:0006247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rare tumors that affect the hematopoietic and lymphoid tissues. The cells of origin are the histiocytes and accessory cells. They can occur at any age and show no significant variations in geographical distribution. This category includes the histiocytic sarcoma, Langerhans cell histiocytosis, Langerhans cell sarcoma, interdigitading dendritic cell sarcoma/tumor, follicular dendritic cell sarcoma/tumor, and dendritic cell sarcoma, not otherwise specified. (WHO, 2001)","definition_xrefs":["NCIT:C9294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid hemopathy","termid":"MONDO:0015757"},{"relation_name":"is_a","term_name":"hematopoietic and lymphoid cell neoplasm","termid":"MONDO:0044881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"histiocytic and dendritic cell neoplasm","secondary_identifiers":["UMLS:C1334030","DOID:5621","GARD:19441","Orphanet:98287","EFO:1000297","MEDGEN:232291"],"synonyms":[{"name":"histiocytic and Dendritic cell neoplasms","type":"exact"},{"name":"histiocytic and Dendritic cell tumors","type":"exact"},{"name":"histiocytic and Dendritic cell tumours","type":"exact"},{"name":"histiocytic and dendritic cell","type":"related"},{"name":"histiocytic and dendritic cell cancer","type":"related"},{"name":"histiocytic and dendritic cell neoplasm","type":"exact"},{"name":"histiocytic and dendritic cell tumor","type":"related"},{"name":"histiocytic and dendritic cell tumour","type":"related"}],"termid":"MONDO:0006247","xrefs":{"Monarch":{"xref_id":"0006247"}}}


id: PATO:0001132
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001132 relative ratio value (obsolete PATO:0001132)","termid":"PATO:0001132"}


id: PR:Q9UTA9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTA9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase C25B8.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.09","synonyms":[{"name":"Spom972h-SPAC25B8.09","type":"exact"}],"termid":"PR:Q9UTA9"}


id: MOD:00837
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes four (2)H deuterium atoms for four (1)H protium atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deuterium substituted residue","termid":"MOD:00786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterium tetrasubstituted residue","synonyms":[{"name":"D(H)4Res","type":"exact"}],"termid":"MOD:00837"}


id: FYPO:0006447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cleavage furrow does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell division site","termid":"FYPO:0001880"},{"relation_name":"is_a","term_name":"abolished protein localization to cell periphery during vegetative growth","termid":"FYPO:0005571"},{"relation_name":"is_a","term_name":"abolished protein localization to membrane during vegetative growth","termid":"FYPO:0005757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to cleavage furrow during vegetative growth","synonyms":[{"name":"abolished protein localization to cleavage furrow during mitotic cell cycle","type":"related"},{"name":"protein absent from cleavage furrow during vegetative growth","type":"related"},{"name":"protein localization to cleavage furrow abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006447"}


id: PBO:0082931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic and mitochondrial histidine tRNA synthetase; efficient mitochondrial localization requires both a presequence and an amino-terminal sequence; mutations in human ortholog HARS2 are associated with Perrault syndrome","termid":"PBO:0082931"}


id: FYPO:0002125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane","termid":"FYPO:0004838"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to plasma membrane during vegetative growth","synonyms":[{"name":"abnormal protein localisation to plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization in plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization to plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002125"}


id: GO:0140669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of production of oxytocin.","definition_xrefs":["PMID:25096581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"regulation of oxytocin production","termid":"GO:0140667"},{"relation_name":"negatively_regulates","term_name":"oxytocin production","termid":"GO:0036162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxytocin production","termid":"GO:0140669"}


id: GO:0034862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,6-dihydroxybenzothiazole + 1/2 O2 = 2,6,7-trihydroxybenzothiazole.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,6-dihydroxybenzothiazole monooxygenase activity (obsolete GO:0034862)","termid":"GO:0034862"}


id: GO:1904946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cobalt(II) acetate stimulus.","definition_xrefs":["PMID:24315322","GOC:mr","GOC:TermGenie","GO_REF:0000071"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to cobalt(II) acetate (obsolete GO:1904946)","termid":"GO:1904946"}


id: GO:0061262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle formation","termid":"GO:0072033"},{"relation_name":"part_of","term_name":"mesonephric renal vesicle morphogenesis","termid":"GO:0061243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric renal vesicle formation","synonyms":[{"name":"mesonephros formation","type":"exact"}],"termid":"GO:0061262"}


id: GO:1903909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor clustering.","definition_xrefs":["GO_REF:0000058","GOC:als","GOC:TermGenie","PMID:23575248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"receptor clustering","termid":"GO:0043113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of receptor clustering","termid":"GO:1903909"}


id: GO:0098721
data:
  {"annotated_genes":["SJAG_03970","SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95871],"is_not":false,"summary":null,"term":"GO:0098721"},{"annotations":[88433],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"The directed movement of uracil from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"uracil transmembrane transport","termid":"GO:1903791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"uracil import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902431"],"synonyms":[{"name":"uracil import into cell","type":"exact"}],"termid":"GO:0098721","terms_by_termid":{"GO:0098721":null,"GO:1905530":null}}


id: PBO:0041382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 15","termid":"PBO:0041382"}


id: PBO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as dubious","termid":"PBO:0000199"}


id: PBO:0116969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AASDHPPT antisense RNA 1","termid":"PBO:0116969"}


id: PR:O59716
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3B8.08 gene.","definition_xrefs":["UniProtKB:O59716","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3B8.8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.08","synonyms":[{"name":"Spom972h-SPBC3B8.08","type":"exact"}],"termid":"PR:O59716"}


id: GO:0005134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-2 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-2 receptor binding","synonyms":[{"name":"IL-2","type":"narrow"},{"name":"interleukin-2 receptor ligand","type":"narrow"}],"termid":"GO:0005134"}


id: PBO:0051378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 5-2","termid":"PBO:0051378"}


id: PATO:0000541
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000541 photosensitivity value (obsolete PATO:0000541)","termid":"PATO:0000541"}


id: FYPO:0006677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at double-strand break sites by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:30104346","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased DNA binding","termid":"FYPO:0000658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000653"],"is_obsolete":false,"name":"decreased DNA binding at double-strand break","synonyms":[{"name":"decreased DNA binding at site of double-strand break","type":"exact"},{"name":"decreased double-stranded DNA break binding","type":"exact"},{"name":"reduced DNA binding at double-strand break","type":"exact"}],"termid":"FYPO:0006677"}


id: PBO:0004812
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.117","termid":"PBO:0004812"}


id: PBO:0061425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ribosyldihydronicotinamide:quinone reductase 2","termid":"PBO:0061425"}


id: MONDO:0044880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic exocrine neoplasm","termid":"MONDO:0021076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cystic tumor of the pancreas","secondary_identifiers":["ONCOTREE:PACT","NCIT:C200227"],"termid":"MONDO:0044880","xrefs":{"Monarch":{"xref_id":"0044880"}}}


id: PBO:0064455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-glucosyltransferase 1","termid":"PBO:0064455"}


id: GO:2001049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tendon cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"tendon cell differentiation","termid":"GO:0035990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tendon cell differentiation","synonyms":[{"name":"regulation of muscle attachment cell differentiation","type":"exact"},{"name":"regulation of tenocyte differentiation","type":"related"}],"termid":"GO:2001049"}


id: GO:0010917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment or extent of a mitochondrial membrane potential, the electric potential existing across any mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of membrane potential","termid":"GO:0045837"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial membrane potential","synonyms":[{"name":"reduction of mitochondrial membrane potential","type":"exact"}],"termid":"GO:0010917"}


id: PBO:0063005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 1b regulatory subunit 1 pseudogene 2","termid":"PBO:0063005"}


id: MONDO:0850198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma that is characterized as a molecular subtype that is not associated with activation of the WNT pathway or sonic hedgehog (SHH) pathway and TP53 mutations are absent.","definition_xrefs":["DOID:0080706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma non-WNT/non-SHH","secondary_identifiers":["UMLS:C4330667","NCIT:C129444","MEDGEN:1387799"],"termid":"MONDO:0850198","xrefs":{"Monarch":{"xref_id":"0850198"}}}


id: MONDO:0025354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, X-linked, 3","secondary_identifiers":["DOID:0112274","OMIM:301059","MEDGEN:1784059","UMLS:C5542347"],"synonyms":[{"name":"SPGFX3","type":"exact"},{"name":"spermatogenic failure, X-linked, 3","type":"exact"},{"name":"spermatogenic failure, X-linked, 3, X-linked recessive","type":"exact"}],"termid":"MONDO:0025354","xrefs":{"Monarch":{"xref_id":"0025354"}}}


id: PBO:0088159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Voltage-gated high-affinity calcium channel; involved in calcium influx in response to some environmental stresses as well as exposure to mating pheromones; interacts and partially co-localizes with Mid1p; however, evidence suggests CCH1 is not required for Mid1p function","termid":"PBO:0088159"}


id: PBO:0091323
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae CDC16","termid":"PBO:0091323"}


id: GO:0034331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves a cell junction in a stable functional or structural state. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.","definition_xrefs":["GOC:mah","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"},{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell junction maintenance","termid":"GO:0034331"}


id: PBO:0049524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.X variant histone","termid":"PBO:0049524"}


id: FYPO:0007917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of  dihydroceramide measured in the cell is lower than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular dihydroceramide level","synonyms":[{"name":"decreased cellular DH-cer level","type":"exact"}],"termid":"FYPO:0007917"}


id: MONDO:1012236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal dysplasia and bladder aplasia-hypoplasia, non-human animal","termid":"MONDO:1011910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal dysplasia and bladder aplasia-hypoplasia, sheep","secondary_identifiers":["OMIA:000857-9940"],"termid":"MONDO:1012236","xrefs":{"Monarch":{"xref_id":"1012236"}}}


id: PBO:0039287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG2 alpha-1,3/1,6-mannosyltransferase","termid":"PBO:0039287"}


id: PBO:0080960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 3","termid":"PBO:0080960"}


id: GO:0006251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dCDP, deoxycytidine 5'-diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009198"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dCDP metabolic process","termid":"GO:0046062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dCDP catabolic process","synonyms":[{"name":"dCDP breakdown","type":"exact"},{"name":"dCDP catabolism","type":"exact"},{"name":"dCDP degradation","type":"exact"}],"termid":"GO:0006251"}


id: GO:0090444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and the rate at which this time point is reached.","definition_xrefs":["PMID:17550772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nematode larval development, heterochronic","termid":"GO:0090444"}


id: MONDO:1012840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any polyneuropathy that occurs in dogs due to a mutation in the SBF2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"polyneuropathy, dog","termid":"MONDO:1012354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy, SBF2-related, dog","secondary_identifiers":["OMIA:002284-9615"],"synonyms":[{"name":"demyelinating polyneuropathy, dog","type":"related"}],"termid":"MONDO:1012840","xrefs":{"Monarch":{"xref_id":"1012840"}}}


id: PR:Q1K9C4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hul5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1K9C4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin protein ligase C167.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.07c","synonyms":[{"name":"Spom972h-hul5","type":"exact"}],"termid":"PR:Q1K9C4"}


id: PBO:0111343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Utp1","termid":"PBO:0111343"}


id: PBO:0063221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH9 antisense RNA 1","termid":"PBO:0063221"}


id: GO:0048675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single axon process involved in cellular development.","definition_xrefs":["GOC:lm","GOC:rl","GOC:dgh","GOC:dph","GOC:BHF","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection extension","termid":"GO:1990138"},{"relation_name":"part_of","term_name":"axonogenesis","termid":"GO:0007409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon extension","secondary_identifiers":["GO:0048676"],"synonyms":[{"name":"axon extension involved in development","type":"exact"}],"termid":"GO:0048675"}


id: FYPO:0003246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through S phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic S phase progression","synonyms":[{"name":"normal S phase progression during mitotic cell cycle","type":"exact"},{"name":"normal mitotic S phase progression during vegetative growth","type":"exact"},{"name":"normal mitotic cell cycle progression in S","type":"exact"}],"termid":"FYPO:0003246"}


id: PR:O14260
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC7D4.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0592 membrane protein C7D4.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.03c","synonyms":[{"name":"Spom972h-SPAC7D4.03c","type":"exact"}],"termid":"PR:O14260"}


id: MOD:01674
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(N-acetaminohexosyl)-L-asparagine.","definition_xrefs":["OMSSA:182","Unimod:43#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-(N-acetylamino)hexosyl-L-asparagine","synonyms":[{"name":"(S)-2-amino-4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"HexNAcAsn","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"},{"name":"N4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(2-acetylamino-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(N-acetylhexosaminyl)asparagine","type":"exact"},{"name":"N4-asparagine-beta-N-acetylhexosaminide","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4HexNAcAsn","type":"exact"},{"name":"hexNAcN","type":"exact"}],"termid":"MOD:01674"}


id: PBO:0017061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, ASAP domain protein","termid":"PBO:0017061"}


id: FYPO:0000685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular response phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter occurs at a lower level of pheromone than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional response to pheromone at decreased pheromone level (obsolete FYPO:0000685)","synonyms":[{"name":"increased sensitivity of positive regulation of transcription from RNA polymerase II promoter by pheromones to pheromone","type":"related"},{"name":"increased transcriptional response to pheromone","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter by pheromones at decreased pheromone level","type":"exact"},{"name":"sensitive to pheromone","type":"related"}],"termid":"FYPO:0000685"}


id: GO:0008534
data:
  {"annotated_genes":["SJAG_01119","SJAG_03724","SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74458,96480,73947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034039"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme-substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site.","definition_xrefs":["GOC:elh","PMID:11554296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized base lesion DNA N-glycosylase activity","termid":"GO:0000702"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0140097","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"oxidized purine nucleobase lesion DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-110244","EC:3.2.2.23","Reactome:R-HSA-110229","MetaCyc:3.2.2.23-RXN","GO:0003907","Reactome:R-HSA-110243"],"synonyms":[{"name":"2,6-diamino-4-hydroxy-5(N-methyl)formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"2,6-diamino-4-hydroxy-5N-formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"8-oxoguanine DNA glycosylase activity","type":"broad"},{"name":"DNA glycohydrolase [2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimide releasing]","type":"related"},{"name":"DNA glycosylase/AP-lyase activity","type":"broad"},{"name":"DNA glycosylase/beta-lyase activity","type":"broad"},{"name":"DNA-formamidopyrimidine glycosylase activity","type":"related"},{"name":"Fapy-DNA glycosylase activity","type":"related"},{"name":"Fpg protein","type":"related"},{"name":"bifunctional DNA glycosylase activity","type":"broad"},{"name":"deoxyribonucleate glycosidase activity","type":"related"},{"name":"formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"oxidized purine base lesion DNA N-glycosylase activity","type":"exact"},{"name":"purine-specific oxidized base lesion DNA N-glycosylase activity","type":"related"}],"termid":"GO:0008534","terms_by_termid":{"GO:0034039":null}}


id: PBO:0051029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein like 1","termid":"PBO:0051029"}


id: GO:0047715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + hypotaurocyamine = N(omega)-phosphohypotaurocyamine + ADP + 2 H+.","definition_xrefs":["RHEA:24008","EC:2.7.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"hypotaurocyamine kinase activity","secondary_identifiers":["KEGG_REACTION:R03939","MetaCyc:HYPOTAUROCYAMINE-KINASE-RXN"],"synonyms":[{"name":"ATP:hypotaurocyamine N-phosphotransferase activity","type":"related"}],"termid":"GO:0047715"}


id: PR:Q09855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat-containing protein pof11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.01","synonyms":[{"name":"Spom972h-pof11","type":"exact"},{"name":"meiotically up-regulated gene 156 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09855"}


id: FYPO:0008265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing in at rDNA is normal (i.e. indistinguishable from wild type). Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing","termid":"FYPO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal chromatin silencing at rDNA","termid":"FYPO:0008265"}


id: PBO:0002674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mRNA processing protein Cox24 (predicted)","termid":"PBO:0002674"}


id: PBO:0064527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit G","termid":"PBO:0064527"}


id: GO:0048086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism.","definition_xrefs":["GOC:dph","GOC:jid","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental pigmentation","termid":"GO:0048070"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"developmental pigmentation","termid":"GO:0048066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of developmental pigmentation","synonyms":[{"name":"down regulation of developmental pigmentation","type":"exact"},{"name":"down-regulation of developmental pigmentation","type":"exact"},{"name":"downregulation of developmental pigmentation","type":"exact"},{"name":"inhibition of pigmentation","type":"narrow"}],"termid":"GO:0048086"}


id: GO:0052320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of phytoalexin metabolism, the chemical reactions and pathways involving phytoalexins.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phytoalexin metabolic process (obsolete GO:0052320)","synonyms":[{"name":"activation of phytoalexin metabolism","type":"narrow"},{"name":"positive regulation of phytoalexin metabolism","type":"related"},{"name":"stimulation of phytoalexin metabolism","type":"narrow"},{"name":"up regulation of phytoalexin metabolism","type":"exact"},{"name":"up-regulation of phytoalexin metabolism","type":"exact"},{"name":"upregulation of phytoalexin metabolism","type":"exact"}],"termid":"GO:0052320"}


id: PBO:0072733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 3","termid":"PBO:0072733"}


id: PBO:0044933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase zeta","termid":"PBO:0044933"}


id: PBO:0113205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial aminopeptidase; cleaves N termini of at least 38 imported proteins after cleavage by the mitochondrial processing peptidase (MPP), thereby increasing their stability; member of aminopeptidase P family; exists in rapid equilibrium between monomer and dimer, with dimer being active species; ortholog of human gene XPNPEP3, which is mutated in rare hereditary kidney disease similar to nephronophthisis","termid":"PBO:0113205"}


id: FYPO:0000174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell wall biogenesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal cell wall","termid":"FYPO:0002946"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell wall biogenesis","synonyms":[{"name":"abnormal fungal-type cell wall biogenesis","type":"exact"}],"termid":"FYPO:0000174"}


id: MONDO:0011336
data:
  {"annotated_genes":["SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86029],"is_not":false,"summary":null,"term":"MONDO:0011336"}]},"cv_name":"mondo","definition":"Any genetic hemophagocytic lymphohistiocytosis in which the cause of the disease is a mutation in the STX11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015541"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial hemophagocytic lymphohistiocytosis 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200730","GARD:9929","DOID:0110924","OMIM:603552","MEDGEN:350245","UMLS:C1863728","MESH:C537252"],"synonyms":[{"name":"FHL4","type":"exact"},{"name":"HLH4","type":"exact"},{"name":"HPLH4","type":"exact"},{"name":"Hlh4","type":"related"},{"name":"Hplh4","type":"related"},{"name":"STX11 genetic hemophagocytic lymphohistiocytosis","type":"exact"},{"name":"familial hemophagocytic lymphohistiocytosis 4","type":"exact"},{"name":"familial hemophagocytic lymphohistiocytosis type 4","type":"exact"},{"name":"genetic hemophagocytic lymphohistiocytosis caused by mutation in STX11","type":"exact"},{"name":"hemophagocytic lymphohistiocytosis, familial, 4","type":"related"},{"name":"hemophagocytic lymphohistiocytosis, familial, type 4","type":"exact"}],"termid":"MONDO:0011336","terms_by_termid":{"MONDO:0011336":null},"xrefs":{"Monarch":{"xref_id":"0011336"}}}


id: PBO:0073888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 5","termid":"PBO:0073888"}


id: GO:0072037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal stem cell that contributes to the shaping of a nephron. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation","termid":"GO:0072497"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell differentiation involved in nephron morphogenesis","termid":"GO:0072037"}


id: PBO:0059929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 15","termid":"PBO:0059929"}


id: PBO:0058606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6738","termid":"PBO:0058606"}


id: PBO:0090907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator Bag101","termid":"PBO:0090907"}


id: FYPO:0005396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to subtelomeric heterochromatin is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001132"},{"relation_name":"is_a","term_name":"abolished protein localization to telomere during vegetative growth","termid":"FYPO:0003109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to subtelomeric heterochromatin","synonyms":[{"name":"abolished protein localisation to subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localization to subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to telomeric heterochromatin","type":"related"},{"name":"protein localization to subtelomeric heterochromatin during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005396"}


id: PBO:0066842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 142","termid":"PBO:0066842"}


id: FYPO:0007761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during the G2/M phase transition of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein phosphorylation during mitotic G2/M transition","synonyms":[{"name":"normal protein phosphorylation during G2/M phase transition","type":"exact"},{"name":"normal protein phosphorylation during G2/M transition of mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during mitotic G2/M transition during vegetative growth","type":"exact"}],"termid":"FYPO:0007761"}


id: PBO:0054805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2218","termid":"PBO:0054805"}


id: MONDO:0007050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acromegaloid changes, cutis verticis gyrata, and corneal leukoma","secondary_identifiers":["UMLS:C1321495","MEDGEN:231158","MESH:C535654","Orphanet:964","OMIM:102100"],"synonyms":[{"name":"Rosenthal-Kloepfer syndrome","type":"related"},{"name":"acromegaloid changes, cutis verticis gyrata and corneal leukoma","type":"related"},{"name":"acromegaloid changes, cutis verticis gyrata, and corneal leukoma","type":"exact"},{"name":"acromegaly-cutis verticis gyrata-corneal leukoma syndrome","type":"exact"}],"termid":"MONDO:0007050","xrefs":{"Monarch":{"xref_id":"0007050"}}}


id: PBO:0055951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 59","termid":"PBO:0055951"}


id: PBO:0028764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_periphery_during_cellular_response_to_heat","termid":"PBO:0028764"}


id: PBO:0074262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 4C1","termid":"PBO:0074262"}


id: GO:0050950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of late stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of melanocyte differentiation","termid":"GO:0045636"},{"relation_name":"is_a","term_name":"regulation of late stripe melanocyte differentiation","termid":"GO:0050940"},{"relation_name":"positively_regulates","term_name":"late stripe melanocyte differentiation","termid":"GO:0050934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of late stripe melanocyte differentiation","synonyms":[{"name":"activation of late stripe melanocyte differentiation","type":"narrow"},{"name":"positive regulation of late stripe melanophore differentiation","type":"exact"},{"name":"stimulation of late stripe melanocyte differentiation","type":"narrow"},{"name":"up regulation of late stripe melanocyte differentiation","type":"exact"},{"name":"up-regulation of late stripe melanocyte differentiation","type":"exact"},{"name":"upregulation of late stripe melanocyte differentiation","type":"exact"}],"termid":"GO:0050950"}


id: PBO:0087598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; interacts with Msb3p; green fluorescent protein (GFP)-fusion protein localizes to the endosome","termid":"PBO:0087598"}


id: GO:0016912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete SAP kinase 5 activity (obsolete GO:0016912)","synonyms":[{"name":"SAP kinase 5 activity","type":"exact"},{"name":"SAPK5","type":"exact"}],"termid":"GO:0016912"}


id: GO:1902260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11","GOC:rl","PMID:11299204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"},{"relation_name":"is_a","term_name":"negative regulation of voltage-gated potassium channel activity","termid":"GO:1903817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of delayed rectifier potassium channel activity","synonyms":[{"name":"down regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"down-regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"downregulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"inhibition of delayed rectifier potassium channel activity","type":"narrow"}],"termid":"GO:1902260"}


id: GO:0015036
data:
  {"annotated_genes":["SJAG_03414","SJAG_01199","SJAG_01038","SJAG_02495","SJAG_02489","SJAG_00288","SJAG_02827","SJAG_04953","SJAG_04904","SJAG_00614","SJAG_03653","SJAG_06468","SJAG_01162","SJAG_04046","SJAG_04632","SJAG_04539","SJAG_00196","SJAG_00489","SJAG_00822","SJAG_01292","SJAG_03992","SJAG_01417","SJAG_04399","SJAG_01647"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118705],"is_not":false,"summary":null,"term":"GO:0015036"},{"annotations":[64700,58108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016971"},{"annotations":[76205,78875,62352,67530,74041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015038"},{"annotations":[79428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004362"},{"annotations":[60466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047134"},{"annotations":[92828,89748,101929,117677,78240,76477,78636,80174,80440,72199,91233,92654,101093,78203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015035"},{"annotations":[59411,69375,98816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016972"},{"annotations":[80041,73554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: substrate with reduced sulfide groups = substrate with oxidized disulfide bonds.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00288":null,"SJAG_00489":null,"SJAG_00614":null,"SJAG_00822":null,"SJAG_01038":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01292":null,"SJAG_01417":null,"SJAG_01647":null,"SJAG_02489":null,"SJAG_02495":null,"SJAG_02827":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03992":null,"SJAG_04046":null,"SJAG_04399":null,"SJAG_04539":null,"SJAG_04632":null,"SJAG_04904":null,"SJAG_04953":null,"SJAG_06468":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"disulfide oxidoreductase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-1222655","Reactome:R-HSA-1222644","Reactome:R-HSA-1222690","Reactome:R-HSA-1222417"],"synonyms":[{"name":"disulphide oxidoreductase activity","type":"exact"}],"termid":"GO:0015036","terms_by_termid":{"GO:0004362":null,"GO:0004791":null,"GO:0015035":null,"GO:0015036":null,"GO:0015038":null,"GO:0016971":null,"GO:0016972":null,"GO:0047134":null}}


id: PBO:0002314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 3","termid":"PBO:0002314"}


id: GO:0021721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the superior olivary nucleus structure. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["ISBN:0838580343","GOC:cls","GOC:jid","GOC:dph","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"pons structural organization","termid":"GO:0021585"},{"relation_name":"part_of","term_name":"superior olivary nucleus morphogenesis","termid":"GO:0021719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus structural organization","synonyms":[{"name":"superior olivary nucleus structural organisation","type":"exact"}],"termid":"GO:0021721"}


id: PR:O74482
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coq11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1840.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.09","synonyms":[{"name":"Spom972h-coq11","type":"exact"}],"termid":"PR:O74482"}


id: GO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate of neuroblast proliferation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"},{"relation_name":"is_a","term_name":"regulation of neuroblast proliferation","termid":"GO:1902692"},{"relation_name":"is_a","term_name":"positive regulation of neural precursor cell proliferation","termid":"GO:2000179"},{"relation_name":"positively_regulates","term_name":"neuroblast proliferation","termid":"GO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuroblast proliferation","synonyms":[{"name":"activation of neuroblast proliferation","type":"narrow"},{"name":"stimulation of neuroblast proliferation","type":"narrow"},{"name":"up regulation of neuroblast proliferation","type":"exact"},{"name":"up-regulation of neuroblast proliferation","type":"exact"},{"name":"upregulation of neuroblast proliferation","type":"exact"}],"termid":"GO:0002052"}


id: SO:0002367
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for plastid LSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_rRNA_gene","termid":"SO:0002366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_LSU_rRNA_gene","synonyms":[{"name":"plastid large subunit rRNA gene","type":"exact"}],"termid":"SO:0002367"}


id: PBO:0060632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolin","termid":"PBO:0060632"}


id: PBO:0043828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPSF1 pseudogene 1","termid":"PBO:0043828"}


id: PBO:0062914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2X 6","termid":"PBO:0062914"}


id: PBO:0059324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 9","termid":"PBO:0059324"}


id: GO:0003351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of cilia of epithelial cells. Depending on the type of cell, there may be one or many cilia per cell. This movement is usually coordinated between many epithelial cells, and serves to move extracellular fluid.","definition_xrefs":["GOC:krc","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium movement","termid":"GO:0003341"},{"relation_name":"is_a","term_name":"extracellular transport","termid":"GO:0006858"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"epithelial cilium movement involved in extracellular fluid movement","synonyms":[{"name":"cilium movement involved in fluid flow","type":"related"},{"name":"epithelial cilium beating","type":"related"}],"termid":"GO:0003351"}


id: FYPO:0006568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic mismatch repair is abnormal. Meiotic mismatch repair is the identification and correction of base-base mismatches, small insertion-deletion loops, and regions of heterology that are present in duplex DNA formed with strands from two recombining molecules.","definition_xrefs":["PomBase:mah","GO:0000710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"},{"relation_name":"is_a","term_name":"abnormal DNA repair","termid":"FYPO:0006567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000298","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic mismatch repair","termid":"FYPO:0006568"}


id: MONDO:0971107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"persistent truncus arteriosus","termid":"MONDO:0018072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"common arterial trunk with aortic dominance","secondary_identifiers":["Orphanet:665044","UMLS:C4546067","MEDGEN:1622872"],"termid":"MONDO:0971107","xrefs":{"Monarch":{"xref_id":"0971107"}}}


id: PBO:0113002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminopeptidase yscII; may have role in obtaining leucine from dipeptide substrates; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway; APE2 has a paralog, AAP1, that arose from the whole genome duplication","termid":"PBO:0113002"}


id: PBO:0040479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 2","termid":"PBO:0040479"}


id: GO:0009639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red or far red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:ai","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to red or far red light","termid":"GO:0009639"}


id: PR:Q9P7C7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX46 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04347","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-processing ATP-dependent RNA helicase prp11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC10H11.01","secondary_identifiers":["UniProtKB:Q9P7C7"],"synonyms":[{"name":"Spom972h-DDX46","type":"exact"}],"termid":"PR:Q9P7C7"}


id: GO:0103003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oleate + a lipid hydroperoxide = 9,10-epoxystearate + a lipid alcohol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oleate peroxygenase activity (obsolete GO:0103003)","termid":"GO:0103003"}


id: PBO:0031445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_double-strand_break_repair","termid":"PBO:0031445"}


id: PBO:0079869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urate oxidase (pseudogene)","termid":"PBO:0079869"}


id: GO:1990793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of substance P by a cell, in which the substance P acts as a neurotransmitter.","definition_xrefs":["PMID:15292051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"substance P secretion","termid":"GO:1990772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"substance P secretion, neurotransmission","termid":"GO:1990793"}


id: PBO:0086366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative alpha-1,3-mannosyltransferase; not required for protein O-glycosylation; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0086366"}


id: GO:0140134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism alters or subverts the circulation of blood in another organism via the action of a venom.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of biological process","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated perturbation of blood circulation","synonyms":[{"name":"venom-mediated perturbation of circulatory system process","type":"broad"}],"termid":"GO:0140134"}


id: MONDO:0018555
data:
  {"annotated_genes":["SJAG_04110","SJAG_00301","SJAG_02829","SJAG_04398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[87216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[85850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[85560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[87049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"}]},"cv_name":"mondo","definition":"Abnormal ovarian or testicular function due to insufficient hormonal stimulation from the hypothalamic-pituitary axis.","definition_xrefs":["NCIT:C113347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadism","termid":"MONDO:0002146"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_02829":null,"SJAG_04110":null,"SJAG_04398":null},"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:E23.0","SCTID:33927004","OMIMPS:147950","NANDO:1200388","DOID:7455","MEDGEN:82883","GARD:16533","HP:0000044","DOID:0090070","ICD9:253.4","NANDO:2100138","NANDO:2200382","Orphanet:432","UMLS:C0271623"],"synonyms":[{"name":"Normosmic idiopathic hypogonadotropic hypogonadism","type":"exact"},{"name":"central hypogonadism","type":"exact"},{"name":"congenital idiopathic hypogonadotropic hypogonadism","type":"narrow"},{"name":"gonadotropic deficiency","type":"exact"},{"name":"hypogonadism, hypogonadotropic","type":"exact"},{"name":"hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism with or without anosmia","type":"exact"},{"name":"hypogonadotropism","type":"related"},{"name":"isolated congenital gonadotropin deficiency","type":"narrow"},{"name":"isolated hypogonadotropic hypogonadism","type":"related"},{"name":"low gonadotropins (secondary hypogonadism)","type":"exact"},{"name":"nIHH","type":"exact"},{"name":"normosmic congenital hypogonadotropic hypogonadism","type":"exact"},{"name":"secondary hypogonadism","type":"exact"}],"termid":"MONDO:0018555","terms_by_termid":{"MONDO:0008980":null,"MONDO:0009514":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0014497":null},"xrefs":{"Monarch":{"xref_id":"0018555"}}}


id: PBO:0085802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; copurifies with late Golgi vesicles containing the v-SNARE Tlg2p; PTM1 has a paralog, YHL017W, that arose from the whole genome duplication","termid":"PBO:0085802"}


id: PATO:0002119
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality which is held by a bearer when the latter exhibits an excessive accumulation of intracellular fluid.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydropic","termid":"PATO:0002119"}


id: GO:0051745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the conversion of (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate + 2 H+ + 2 reduced [2Fe-2S]-[ferredoxin] to isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) releasing H2O + 2 oxidized [2Fe-2S]-[ferredoxin]. Note that (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate is an alternative name for 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate.","definition_xrefs":["GOC:pg","EC:1.17.7.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","termid":"GO:0052592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity","secondary_identifiers":["MetaCyc:ISPH2-RXN","KEGG_REACTION:R05884"],"synonyms":[{"name":"4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity","type":"exact"},{"name":"isopentenyl-diphosphate:NAD(P)+ oxidoreductase activity","type":"exact"}],"termid":"GO:0051745"}


id: GO:0071531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a Rel homology domain (RHD) interaction.","definition_xrefs":["GOC:amm","InterPro:IPR011539"],"gene_count":0,"genotype_count":0,"name":"obsolete Rel homology domain-mediated complex assembly (obsolete GO:0071531)","synonyms":[{"name":"RHD domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071531"}


id: GO:0044831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus modulates the frequency, rate or extent of cytokine production in its host organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host cytokine production (obsolete GO:0044831)","termid":"GO:0044831"}


id: GO:0071975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility that results in the smooth movement of a cell through a liquid medium.","definition_xrefs":["PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell swimming","synonyms":[{"name":"cell swimming motility","type":"exact"}],"termid":"GO:0071975"}


id: PBO:0067698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 6","termid":"PBO:0067698"}


id: GO:0047706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrobiochanin A + NADP+ = biochanin A + H+ + NADPH.","definition_xrefs":["EC:1.3.1.46","RHEA:12817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"biochanin-A reductase activity","secondary_identifiers":["MetaCyc:BIOCHANIN-A-REDUCTASE-RXN","KEGG_REACTION:R02954"],"synonyms":[{"name":"dihydrobiochanin-A:NADP+ delta2-oxidoreductase activity","type":"related"}],"termid":"GO:0047706"}


id: MONDO:0018650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemochromatosis type 5 (obsolete MONDO:0018650)","termid":"MONDO:0018650","xrefs":{"Monarch":{"xref_id":"0018650"}}}


id: PBO:0055586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3022","termid":"PBO:0055586"}


id: GO:0050107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + a monoterpenol = CoA + a monoterpenol acetate ester.","definition_xrefs":["EC:2.3.1.69","MetaCyc:MONOTERPENOL-O-ACETYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"monoterpenol O-acetyltransferase activity","synonyms":[{"name":"acetyl-CoA:monoterpenol O-acetyltransferase activity","type":"related"},{"name":"menthol transacetylase activity","type":"narrow"}],"termid":"GO:0050107"}


id: GO:0097038
data:
  {"annotated_genes":["SJAG_01329","SJAG_03750","SJAG_04883","SJAG_02683","SJAG_00355","SJAG_04049","SJAG_01722","SJAG_04578","SJAG_02532","SJAG_04059","SJAG_03162","SJAG_01422","SJAG_03281","SJAG_04583","SJAG_00784","SJAG_00790","SJAG_03609","SJAG_03943","SJAG_00825","SJAG_01227","SJAG_01785"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71855,72784,73691,74911,88814,89108,107703,110217,110768,114226,114489,114708,119178],"is_not":false,"summary":null,"term":"GO:0097038"},{"annotations":[93439],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099020"},{"annotations":[87715,95056,98127,98980,106644,100921,115905],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990578"}]},"cv_name":"cellular_component","definition":"The portion of endoplasmic reticulum, the intracellular network of tubules and cisternae, that occurs near the nucleus. The lumen of the perinuclear endoplasmic reticulum is contiguous with the nuclear envelope lumen (also called perinuclear space), the region between the inner and outer nuclear membranes.","definition_xrefs":["GOC:mcc","GOC:mah","GOC:bf","GOC:pr","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endoplasmic reticulum","termid":"GO:0005783"},{"relation_name":"part_of","term_name":"perinuclear region of cytoplasm","termid":"GO:0048471"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_00784":null,"SJAG_00790":null,"SJAG_00825":null,"SJAG_01227":null,"SJAG_01329":null,"SJAG_01422":null,"SJAG_01722":null,"SJAG_01785":null,"SJAG_02532":null,"SJAG_02683":null,"SJAG_03162":null,"SJAG_03281":null,"SJAG_03609":null,"SJAG_03750":null,"SJAG_03943":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04578":null,"SJAG_04583":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"perinuclear endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"perinuclear ER","type":"exact"}],"termid":"GO:0097038","terms_by_termid":{"GO:0097038":null,"GO:0099020":null,"GO:1990578":null}}


id: PBO:0005268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xap-5-like protein","termid":"PBO:0005268"}


id: PBO:0050981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 43","termid":"PBO:0050981"}


id: PBO:0029183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_6-phosphate_level","termid":"PBO:0029183"}


id: PR:O14253
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear cap-binding protein subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding protein subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.07","secondary_identifiers":["UniProtKB:O14253"],"synonyms":[{"name":"80 kDa nuclear cap-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CBP80 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NCBP 80 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NCBP1","type":"exact"}],"termid":"PR:O14253"}


id: FYPO:0007769
data:
  {"alleles_by_uniquename":{"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007770"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin tethering at the nuclear periphery persists after the onset of mitosis. Normally, heterochromatic parts of chromosomes, such as centromeres and telomeres, are maintained at the nuclear periphery during interphase and released during mitosis.","definition_xrefs":["PomBase:mah","PMID:32109380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin tethering at nuclear periphery","termid":"FYPO:0007768"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased heterochromatin tethering at nuclear periphery during mitosis","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892"],"single_locus_genotype_uniquenames":["vps4delta"],"synonyms":[{"name":"increased heterochromatin anchoring at nuclear periphery during mitosis","type":"exact"},{"name":"increased heterochromatin tethering at nuclear periphery during mitosis during mitotic cell cycle","type":"related"},{"name":"increased heterochromatin tethering at nuclear periphery during mitosis during vegetative growth","type":"exact"},{"name":"increased heterochromatin tethering at nuclear periphery during mitotic M phase","type":"related"},{"name":"increased heterochromatin tethering at nuclear periphery during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007769","terms_by_termid":{"FYPO:0007770":null,"FYPO_EXT:0000001":null}}


id: MONDO:0003094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucoepidermoid thyroid carcinoma (obsolete MONDO:0003094)","termid":"MONDO:0003094","xrefs":{"Monarch":{"xref_id":"0003094"}}}


id: GO:2000679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription regulatory region DNA binding.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA binding","termid":"GO:0043388"},{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transcription regulatory region DNA binding","termid":"GO:2000679"}


id: GO:0098560
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the late endosome membrane that faces the cytoplasm.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of endosome membrane","termid":"GO:0010009"},{"relation_name":"part_of","term_name":"late endosome membrane","termid":"GO:0031902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"cytoplasmic side of late endosome membrane","synonyms":[{"name":"external leaflet of late endosome membrane","type":"exact"},{"name":"external side of late endosome membrane","type":"exact"}],"termid":"GO:0098560"}


id: MONDO:0023217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastro-enteropancreatic neuroendocrine tumor (obsolete MONDO:0023217)","termid":"MONDO:0023217","xrefs":{"Monarch":{"xref_id":"0023217"}}}


id: MONDO:0001270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bladder calculus","termid":"MONDO:0006678"},{"relation_name":"is_a","term_name":"bladder diverticulum","termid":"MONDO:0007197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stone in bladder diverticulum","secondary_identifiers":["ICD9:594.0","MEDGEN:510220","UMLS:C0156265","DOID:11354","SCTID:18109005"],"synonyms":[{"name":"calculus in diverticulum of bladder","type":"exact"}],"termid":"MONDO:0001270","xrefs":{"Monarch":{"xref_id":"0001270"}}}


id: FYPO:0003549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell during one or both meiotic nuclear divisions. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization during meiosis","synonyms":[{"name":"abnormal cellular protein localisation during meiosis","type":"exact"},{"name":"abnormal cellular protein localization during meiosis","type":"exact"},{"name":"abnormal protein localisation during meiosis","type":"exact"},{"name":"abnormal protein localization during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003549"}


id: PBO:0067302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 387, pseudogene","termid":"PBO:0067302"}


id: PBO:0051952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor type 1","termid":"PBO:0051952"}


id: FYPO:0006292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which protein localization to the vacuole does not occur, and the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:26365378","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to vacuole, with protein mislocalized to cytosol","synonyms":[{"name":"abolished protein localisation to vacuole, with protein mislocalised to cytosol","type":"exact"},{"name":"abolished protein localization to vacuole, with protein mislocalized to cytosol, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to vacuole, with protein mislocalized to cytosol, during vegetative growth","type":"exact"},{"name":"protein localization to vacuole abolished, with protein mislocalized to cytosol","type":"exact"},{"name":"protein mislocalized from vacuole to cytosol","type":"related"}],"termid":"FYPO:0006292"}


id: MONDO:0001291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain compression","secondary_identifiers":["ICD9:348.4","SCTID:46963008","MEDGEN:507585","UMLS:C0009592","DOID:11457","ICD10CM:G93.5"],"termid":"MONDO:0001291","xrefs":{"Monarch":{"xref_id":"0001291"}}}


id: GO:0052615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-kaur-16-ene + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = ent-kaur-16-en-19-oate + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:32323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ent-kaurene oxidase activity","secondary_identifiers":["EC:1.14.14.86","MetaCyc:1.14.13.78-RXN"],"termid":"GO:0052615"}


id: MONDO:0019828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pituitary stalk interruption syndrome (PSIS) is a congenital abnormality of the pituitary that is responsible for pituitary deficiency and is usually characterized by the triad of a very thin or interrupted pituitary stalk, an ectopic (or absent) posterior pituitary (EPP) and hypoplasia or aplasia of the anterior pituitary visible on MRI. In some patients the abnormality may be limited to EPP (also called ectopic neurohypophysis) or to an interrupted pituitary stalk.","definition_xrefs":["Orphanet:95496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"non-acquired pituitary hormone deficiency","termid":"MONDO:0019824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary stalk interruption syndrome","secondary_identifiers":["icd11.foundation:1474283222","UMLS:C4053775","NCIT:C121150","SCTID:715727009","GARD:13209","MEDGEN:883774"],"synonyms":[{"name":"PSIS","type":"exact"},{"name":"ectopic neurohypophysis","type":"exact"},{"name":"hypoplastic anterior pituitary, missing stalk, and ectopic posterior pituitary","type":"exact"}],"termid":"MONDO:0019828","xrefs":{"Monarch":{"xref_id":"0019828"}}}


id: MOD:01591
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins of 304.205359 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.000001 Da","termid":"MOD:01515"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199-304.206 Da","termid":"MOD:01592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}


id: PBO:0061669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 50 pseudogene 2","termid":"PBO:0061669"}


id: GO:0032973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of amino acids from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"amino acid export across plasma membrane","secondary_identifiers":["GO:0044746"],"synonyms":[{"name":"amino acid efflux","type":"exact"},{"name":"amino acid export","type":"broad"},{"name":"amino acid transmembrane export","type":"broad"}],"termid":"GO:0032973"}


id: PBO:0044701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 X-linked","termid":"PBO:0044701"}


id: MONDO:0012975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the GJB6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 3B","secondary_identifiers":["UMLS:C2675237","MESH:C567215","GARD:18130","DOID:0110565","OMIM:612643","MEDGEN:436382"],"synonyms":[{"name":"DFNA3B","type":"narrow"},{"name":"GJB6 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 3B","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 3B","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in GJB6","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 3B","type":"narrow"},{"name":"deafness, autosomal dominant 3B","type":"narrow"},{"name":"deafness, autosomal dominant 3b","type":"narrow"},{"name":"deafness, autosomal dominant type 3B","type":"narrow"}],"termid":"MONDO:0012975","xrefs":{"Monarch":{"xref_id":"0012975"}}}


id: PBO:0077805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOX high mobility group box family member 3","termid":"PBO:0077805"}


id: PBO:0059912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 35","termid":"PBO:0059912"}


id: MONDO:0015846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A uterovaginal malformation that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic uterovaginal malformation (obsolete MONDO:0015846)","secondary_identifiers":["Orphanet:180148"],"synonyms":[{"name":"syndrome associated with uterovaginal malformation","type":"exact"},{"name":"syndromic uterovaginal malformation","type":"exact"}],"termid":"MONDO:0015846","xrefs":{"Monarch":{"xref_id":"0015846"}}}


id: PBO:0028941
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_poly(U)_polymerase_activity","termid":"PBO:0028941"}


id: PBO:0053171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"left-right determination factor 2","termid":"PBO:0053171"}


id: PBO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase Cmk1","termid":"PBO:0001151"}


id: PBO:0044224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortexin domain containing 1","termid":"PBO:0044224"}


id: MONDO:0011899
data:
  {"annotated_genes":["SJAG_02536","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85867,85866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","definition":"Noonan-like syndrome with loose anagen hair (NS/LAH) is a Noonan-related syndrome, characterized by facial anomalies suggestive of Noonan syndrome ; a distinctive hair anomaly described as loose anagen hair syndrome ; frequent congenital heart defects; distinctive skin features with darkly pigmented skin, keratosis pilaris, eczema or occasional neonatal ichtyosis ; and short stature, often associated with a GH deficiency and psychomotor delays.","definition_xrefs":["Orphanet:2701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loose anagen syndrome","termid":"MONDO:0010908"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"Noonan syndrome and Noonan-related syndrome","termid":"MONDO:0020297"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome-like disorder with loose anagen hair","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:723444009","MESH:C564342","DOID:0080691","UMLS:C1843181","GARD:10719","NCIT:C178129","OMIMPS:607721","MEDGEN:334697"],"synonyms":[{"name":"NS/LAH","type":"exact"},{"name":"NSLH","type":"related"},{"name":"NSLH1","type":"related"},{"name":"Noonan syndrome-like disorder with loose anagen hair","type":"exact"},{"name":"Noonan syndrome-like disorder with loose anagen hair 1","type":"related"},{"name":"Noonan-like syndrome with loose anagen hair","type":"related"},{"name":"Tosti syndrome","type":"exact"}],"termid":"MONDO:0011899","terms_by_termid":{"MONDO:0054588":null},"xrefs":{"Monarch":{"xref_id":"0011899"}}}


id: PBO:0072445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 9","termid":"PBO:0072445"}


id: PBO:0085040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential component of U5 snRNP; nuclear protein; physically interacts with Irr1p of cohesin complex; may link together proteins involved in chromosome segregation, mRNA splicing and DNA replication","termid":"PBO:0085040"}


id: PBO:0049588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 6","termid":"PBO:0049588"}


id: PBO:0055466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2899","termid":"PBO:0055466"}


id: MONDO:0006455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary thymic carcinoma, characterized by an undifferentiated solid tumor growth, without associated sarcomatoid features.","definition_xrefs":["NCIT:C35718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"},{"relation_name":"is_a","term_name":"thymic carcinoma","termid":"MONDO:0006451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymic undifferentiated carcinoma","secondary_identifiers":["UMLS:C1336865","EFO:1000580","MEDGEN:234452"],"synonyms":[{"name":"thymic undifferentiated carcinoma","type":"exact"}],"termid":"MONDO:0006455","xrefs":{"Monarch":{"xref_id":"0006455"}}}


id: GO:0016319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mushroom body over time, from its formation to the mature structure. The mushroom body is composed of the prominent neuropil structures of the insect central brain, thought to be crucial for olfactory associated learning. These consist mainly of a bulbous calyx and tightly packaged arrays of thin parallel fibers of the Kenyon cells.","definition_xrefs":["PMID:8790424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mushroom body development","termid":"GO:0016319"}


id: PBO:0017961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation initiation factor Mti3 (predicted)","termid":"PBO:0017961"}


id: GO:0010923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or frequency of phosphatase activity. Phosphatases catalyze the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatase activity","termid":"GO:0010921"},{"relation_name":"is_a","term_name":"negative regulation of dephosphorylation","termid":"GO:0035305"},{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatase activity","termid":"GO:0010923"}


id: PBO:0053077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LBX2 antisense RNA 1","termid":"PBO:0053077"}


id: MONDO:0017486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"radial hemimelia","termid":"MONDO:0019671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"radial hemimelia, unilateral","secondary_identifiers":["icd11.foundation:1956537587","Orphanet:295069"],"synonyms":[{"name":"radial longitidinal meromelia, unilateral","type":"exact"}],"termid":"MONDO:0017486","xrefs":{"Monarch":{"xref_id":"0017486"}}}


id: GO:0071205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the juxtaparanode region of an axon.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to axon","termid":"GO:0099612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to juxtaparanode region of axon","synonyms":[{"name":"protein localisation to juxtaparanode region of axon","type":"exact"}],"termid":"GO:0071205"}


id: FYPO:0008184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the processome is decreased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to processome","termid":"FYPO:0008184"}


id: MONDO:1011334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mouth mucosa disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder, non-human animal","termid":"MONDO:1011333"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mouth mucosa disorder, non-human animal","termid":"MONDO:1011334","xrefs":{"Monarch":{"xref_id":"1011334"}}}


id: PBO:0063808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 1","termid":"PBO:0063808"}


id: PBO:0030008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level","termid":"PBO:0030008"}


id: GO:0030747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-pyruvate + S-adenosyl-L-methionine = (R)-3-(indol-3-yl)-2-oxobutanoate + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indolepyruvate C-methyltransferase activity","secondary_identifiers":["RHEA:12112","MetaCyc:RXN-17530"],"synonyms":[{"name":"S-adenosyl-L-methionine:(indol-3-yl)pyruvate C-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:indolepyruvate C-methyltransferase activity","type":"related"},{"name":"indolepyruvate 3-methyltransferase activity","type":"related"},{"name":"indolepyruvate methyltransferase activity","type":"related"},{"name":"indolepyruvic acid methyltransferase activity","type":"related"}],"termid":"GO:0030747"}


id: MONDO:1040011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A human disorder which results from a tear in one of the major cervicocerebral arteries, allowing blood to enter the wall of the artery and split its layers. Pathogenesis typically leads to either stenosis or aneurysmal dilatation of the vessel.","definition_xrefs":["PMID:28722857","PMID:19096659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical artery dissection","termid":"MONDO:0006061"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebral artery dissection","synonyms":[{"name":"VAD","type":"exact"}],"termid":"MONDO:1040011","xrefs":{"Monarch":{"xref_id":"1040011"}}}


id: MONDO:0002166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extranodal lymphoma that arises from the rectum. The majority are B-cell non-Hodgkin lymphomas.","definition_xrefs":["NCIT:C5553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal cancer","termid":"MONDO:0006519"},{"relation_name":"is_a","term_name":"colorectal lymphoma","termid":"MONDO:0024656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"rectum lymphoma","secondary_identifiers":["MEDGEN:233393","DOID:1988","UMLS:C1335685"],"synonyms":[{"name":"lymphoma of rectum","type":"exact"},{"name":"lymphoma of the rectum","type":"exact"},{"name":"primary rectal lymphoma","type":"exact"},{"name":"rectal lymphoma","type":"exact"},{"name":"rectum lymphoma","type":"exact"}],"termid":"MONDO:0002166","xrefs":{"Monarch":{"xref_id":"0002166"}}}


id: GO:0018442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of an ester group to a glutamic acid residue in a protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glutamic acid esterification (obsolete GO:0018442)","termid":"GO:0018442"}


id: PBO:0050854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interactor of little elongation complex ELL subunit 1","termid":"PBO:0050854"}


id: FYPO:0004554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during S phase of the mitotic cell cycle and during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during mitotic G2 phase during cellular response to ionizing radiation","termid":"FYPO:0004261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during mitotic S phase during cellular response to ionizing radiation","synonyms":[{"name":"decreased protein phosphorylation during cellular response to ionizing radiation during S phase of mitotic cell cycle","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to ionizing radiation during mitotic S phase","type":"exact"},{"name":"decreased protein phosphorylation during mitotic S phase during cellular response to IR","type":"exact"},{"name":"decreased protein phosphorylation during mitotic S phase during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to IR during mitotic S phase","type":"exact"},{"name":"reduced protein phosphorylation during mitotic S phase during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004554"}


id: PBO:0066861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 161","termid":"PBO:0066861"}


id: PBO:0057233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 412","termid":"PBO:0057233"}


id: PBO:0073343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 5","termid":"PBO:0073343"}


id: GO:0006351
data:
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id: FYPO:0004615
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id: GO:0090394
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id: GO:0010441
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id: PBO:0040463
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id: PBO:0047084
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 136 member C, pseudogene","termid":"PBO:0047084"}


id: PBO:0035797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_acetylation_during_vegetative_growth","termid":"PBO:0035797"}


id: PBO:0084183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone deacetylase and subunit of Set3 and Rpd3L complexes; required for gene activation via specific deacetylation of lysines in H3 and H4 histone tails; subunit of the Set3 complex, a meiotic-specific repressor of sporulation specific genes that contains deacetylase activity; co-localizes with Cmr1p in nuclear foci in response to DNA damage by MMS","termid":"PBO:0084183"}


id: GO:0031097
data:
  {"annotated_genes":["SJAG_04703","SJAG_04781","SJAG_02241","SJAG_01964","SJAG_04498","SJAG_01889","SJAG_01732","SJAG_00773","SJAG_00279","SJAG_03704","SJAG_03703","SJAG_00152","SJAG_03581","SJAG_04462","SJAG_02831","SJAG_03602","SJAG_04001","SJAG_01456","SJAG_03011","SJAG_04776","SJAG_05290","SJAG_03637","SJAG_01665","SJAG_04522","SJAG_04666","SJAG_01448","SJAG_03119","SJAG_02838","SJAG_02431","SJAG_03025","SJAG_04982","SJAG_04486","SJAG_03748","SJAG_04280","SJAG_03374","SJAG_01277","SJAG_03936","SJAG_02645","SJAG_04375","SJAG_01143","SJAG_00663","SJAG_01658","SJAG_04050","SJAG_00938","SJAG_03564","SJAG_00118","SJAG_04566","SJAG_02169","SJAG_02368","SJAG_03088","SJAG_03596","SJAG_00228","SJAG_00185","SJAG_00700","SJAG_02700","SJAG_00807"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57198,62532,65384,69161,72405,74318,87875,88490,88806,92755,92878,94914,95702,98045,98239,99218,99642,100221,102974,103375,105462,105663,107916,110826,111064,111106,113352,118190,119173],"is_not":false,"summary":null,"term":"GO:0031097"},{"annotations":[98746,99318,103797,116302],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110115"},{"annotations":[101274,118935,108262,100431,98141,113080,118171,102081,98217,104231],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036391"},{"annotations":[105496,117329,96650,101016,106518,118172,98348,91057,94200,88611,89294,92926,101577,92661],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071341"}]},"cv_name":"cellular_component","definition":"A medial cortical band overlaying the nucleus which acts as a landmark for contractile ring positioning and plays a role in cell cycle regulation.","definition_xrefs":["GOC:vw","PMID:15572668","PMID:19474789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00152":null,"SJAG_00185":null,"SJAG_00228":null,"SJAG_00279":null,"SJAG_00663":null,"SJAG_00700":null,"SJAG_00773":null,"SJAG_00807":null,"SJAG_00938":null,"SJAG_01143":null,"SJAG_01277":null,"SJAG_01448":null,"SJAG_01456":null,"SJAG_01658":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01889":null,"SJAG_01964":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02368":null,"SJAG_02431":null,"SJAG_02645":null,"SJAG_02700":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03374":null,"SJAG_03564":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03602":null,"SJAG_03637":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_03748":null,"SJAG_03936":null,"SJAG_04001":null,"SJAG_04050":null,"SJAG_04280":null,"SJAG_04375":null,"SJAG_04462":null,"SJAG_04486":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04566":null,"SJAG_04666":null,"SJAG_04703":null,"SJAG_04776":null,"SJAG_04781":null,"SJAG_04982":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"medial cortex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"medial ring","type":"exact"}],"termid":"GO:0031097","terms_by_termid":{"GO:0031097":null,"GO:0036391":null,"GO:0071341":null,"GO:0110115":null}}


id: PBO:0080682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAS/WASL interacting protein family member 2","termid":"PBO:0080682"}


id: PBO:0081940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger HIT-type containing 3","termid":"PBO:0081940"}


id: GO:0006749
data:
  {"annotated_genes":["SJAG_05181","SJAG_01162","SJAG_00988","SJAG_01351","SJAG_02599","SJAG_00903","SJAG_01995","SJAG_04726","SJAG_03316","SJAG_04858","SJAG_01612","SJAG_03494"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77481,79427,99596,103107],"is_not":false,"summary":null,"term":"GO:0006749"},{"annotations":[77681,57776,79132,108744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[76984,102576,78922,74019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006751"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00903":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01351":null,"SJAG_01612":null,"SJAG_01995":null,"SJAG_02599":null,"SJAG_03316":null,"SJAG_03494":null,"SJAG_04726":null,"SJAG_04858":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"glutathione metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"glutathione metabolism","type":"exact"},{"name":"oxidized glutathione reduction","type":"narrow"}],"termid":"GO:0006749","terms_by_termid":{"GO:0006749":null,"GO:0006750":null,"GO:0006751":null}}


id: PBO:0078738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 1 like","termid":"PBO:0078738"}


id: PBO:0030838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_adenine_import","termid":"PBO:0030838"}


id: RO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A 'has regulatory component activity' B if A and B are GO molecular functions (GO_0003674), A has_component B and A is regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component_activity","termid":"RO:0002017"},{"relation_name":"is_a","term_name":"regulated_by","termid":"RO:0002334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_regulatory_component_activity","termid":"RO:0002013"}


id: FYPO:0002675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dTDP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular dTDP level","synonyms":[{"name":"increased cellular dTDP level during mitotic cell cycle","type":"related"},{"name":"increased cellular dTDP level during vegetative growth","type":"exact"},{"name":"increased dTDP accumulation","type":"related"}],"termid":"FYPO:0002675"}


id: GO:0102100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arsenate + mycothiol = mycothiol-arsenate conjugate + H2O.","definition_xrefs":["GOC:pz","EC:2.8.4.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylthioltransferase activity","termid":"GO:0050497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"mycothiol-arsenate ligase activity","secondary_identifiers":["MetaCyc:RXN-11187","RHEA:27349"],"termid":"GO:0102100"}


id: PBO:0052352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 4B","termid":"PBO:0052352"}


id: GO:0046119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 7-methylguanosine, a modified nucleoside that forms a cap at the 5'-terminus of eukaryotic mRNA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"7-methylguanosine metabolic process","termid":"GO:0008618"},{"relation_name":"is_a","term_name":"guanosine-containing compound catabolic process","termid":"GO:1901069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"7-methylguanosine catabolic process","synonyms":[{"name":"7-methylguanosine breakdown","type":"exact"},{"name":"7-methylguanosine catabolism","type":"exact"},{"name":"7-methylguanosine degradation","type":"exact"}],"termid":"GO:0046119"}


id: PBO:0041746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA1 antisense RNA 3","termid":"PBO:0041746"}


id: MONDO:0018054
data:
  {"annotated_genes":["SJAG_02757","SJAG_00228"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014340"},{"annotations":[87365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015001"}]},"cv_name":"mondo","definition":"An autosomal dominant heart condition that causes disruptions in the heart's normal rhythm. This condition is characterized by uncoordinated electrical activity in the heart's upper chambers (the atria), which causes the heartbeat to become fast and irregular.","direct_ancestors":[{"relation_name":"is_a","term_name":"atrial fibrillation","termid":"MONDO:0004981"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_02757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial atrial fibrillation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:45855978","UMLS:C3468561","SCTID:715395008","GARD:9740","DOID:0050650","MEDGEN:894635","Orphanet:334","OMIMPS:608583"],"synonyms":[{"name":"ATFB","type":"exact"},{"name":"atrial fibrillation autosomal dominant","type":"related"},{"name":"atrial fibrillation, familial","type":"related"},{"name":"autosomal dominant atrial fibrillation","type":"related"},{"name":"hereditary atrial fibrillation (disease)","type":"exact"}],"termid":"MONDO:0018054","terms_by_termid":{"MONDO:0014340":null,"MONDO:0015001":null},"xrefs":{"Monarch":{"xref_id":"0018054"}}}


id: PBO:0076461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase 1","termid":"PBO:0076461"}


id: PBO:0041308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 42","termid":"PBO:0041308"}


id: PBO:0078993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 1-3","termid":"PBO:0078993"}


id: MONDO:0002952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"follicular basal cell carcinoma","secondary_identifiers":["DOID:4295","NCIT:C27538","SCTID:402526009","UMLS:C1883723","MEDGEN:363001"],"synonyms":[{"name":"follicular (pilar) basal cell carcinoma","type":"exact"},{"name":"skin follicular basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002952","xrefs":{"Monarch":{"xref_id":"0002952"}}}


id: MONDO:1012001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral corneal stromal loss, non-human animal","secondary_identifiers":["OMIA:002187"],"termid":"MONDO:1012001","xrefs":{"Monarch":{"xref_id":"1012001"}}}


id: GO:0090552
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection part that is the apical most portion of a unicellular trichome.","definition_xrefs":["PO:0025537","GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"unicellular trichome apex","termid":"GO:0090552"}


id: GO:1900340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from formic acid.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from formic acid","termid":"GO:1900339"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from formic acid","termid":"GO:2001127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from formic acid","synonyms":[{"name":"down regulation of methane biosynthetic process from formic acid","type":"exact"},{"name":"down-regulation of methane biosynthetic process from formic acid","type":"exact"},{"name":"downregulation of methane biosynthetic process from formic acid","type":"exact"},{"name":"inhibition of methane biosynthetic process from formic acid","type":"narrow"}],"termid":"GO:1900340"}


id: MONDO:0033310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 31","secondary_identifiers":["GARD:16251","DOID:0080277","MEDGEN:1618082","OMIM:617761","UMLS:C4540355"],"synonyms":[{"name":"JBTS31","type":"related"},{"name":"Joubert syndrome 31","type":"exact"}],"termid":"MONDO:0033310","xrefs":{"Monarch":{"xref_id":"0033310"}}}


id: PBO:0077655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 6b","termid":"PBO:0077655"}


id: GO:0035982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A developmental process that arises as an organism progresses toward the end of its lifespan that results in a decline in behavioral activities such as locomotory behavior, and learning or memory.","definition_xrefs":["PMID:20523893","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent behavioral decline (obsolete GO:0035982)","synonyms":[{"name":"age-dependent behavioural decline","type":"exact"},{"name":"age-related behavioral decline","type":"exact"},{"name":"behavioral aging","type":"exact"}],"termid":"GO:0035982"}


id: PBO:0056565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance domain containing 2","termid":"PBO:0056565"}


id: MONDO:0002490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm that arises from the breast. Representative examples include angiosarcoma, liposarcoma, leiomyosarcoma, rhabdomyosarcoma, and extraskeletal osteosarcoma.","definition_xrefs":["NCIT:C4670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast cancer","termid":"MONDO:0007254"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast sarcoma","secondary_identifiers":["DOID:3017","UMLS:C0349667","MEDGEN:87613","ONCOTREE:PBS","SCTID:278050001"],"synonyms":[{"name":"PBS","type":"related"},{"name":"breast sarcoma","type":"exact"},{"name":"sarcoma of breast","type":"exact"},{"name":"sarcoma of the breast","type":"exact"}],"termid":"MONDO:0002490","xrefs":{"Monarch":{"xref_id":"0002490"}}}


id: PBO:0017458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-hyperparasitized_by","termid":"PBO:0017458"}


id: FYPO:0004240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 56 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3 acetylation during vegetative growth","termid":"FYPO:0002362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K56 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H3-K56 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K56 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K56 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004240"}


id: PBO:0088769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription regulator complex subunit Bur6","termid":"PBO:0088769"}


id: PBO:0036461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-BAR domain protein Syp1 (predicted)","termid":"PBO:0036461"}


id: FYPO:0004832
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during anaphase A does not occur. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase A is the stage of mitosis in which the kinetochore microtubules shorten as chromosomes move toward the spindle poles.","definition_xrefs":["PomBase:mah","GO:1902967","GO:1990023","PMID:16824200","GO:0000091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle midzone during anaphase","termid":"FYPO:0004412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle midzone during anaphase A","synonyms":[{"name":"abolished protein localization to spindle midzone during mitotic anaphase A","type":"exact"},{"name":"protein absent from mitotic spindle midzone during anaphase A","type":"related"},{"name":"protein localisation to mitotic spindle midzone abolished during anaphase A","type":"exact"},{"name":"protein localization to mitotic spindle midzone abolished during anaphase A","type":"exact"},{"name":"protein localization to spindle midzone abolished during anaphase A during vegetative growth","type":"exact"}],"termid":"FYPO:0004832"}


id: PBO:0013119
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein that suppresses Calcineurin deletion","termid":"PBO:0013119"}


id: SO:0000900
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a pseudogene where by an mRNA was retrotransposed. The mRNA sequence is transcribed back into the genome, lacking introns and promotors, but often including a polyA tail.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000900 processed (obsolete SO:0000900)","termid":"SO:0000900"}


id: PBO:0058967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKS transition zone complex subunit 1","termid":"PBO:0058967"}


id: PBO:0056199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGEA8 antisense RNA 1","termid":"PBO:0056199"}


id: PBO:0026973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_RNA_level","termid":"PBO:0026973"}


id: MONDO:0850285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intrinsic asthma that is characterized by exposure to tobacco smoke and other inflammatory gasses or particulate matter.","definition_xrefs":["DOID:0080819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic asthma","termid":"MONDO:0004765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"environmental induced asthma","termid":"MONDO:0850285","xrefs":{"Monarch":{"xref_id":"0850285"}}}


id: PBO:0036424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone activator Aha1","termid":"PBO:0036424"}


id: MONDO:0800107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect","termid":"MONDO:0002070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"anterior deviation infundibular septum","secondary_identifiers":["UMLS:C3164404","SCTID:448619007","MEDGEN:756812"],"termid":"MONDO:0800107","xrefs":{"Monarch":{"xref_id":"0800107"}}}


id: PBO:0043002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase acidic","termid":"PBO:0043002"}


id: PBO:0027173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_phleomycin","termid":"PBO:0027173"}


id: PBO:0057558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 676","termid":"PBO:0057558"}


id: PR:Q9P3U0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3U0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase Ubp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.06","synonyms":[{"name":"SPAC328.06","type":"related"},{"name":"Spom972h-ubp2","type":"exact"},{"name":"deubiquitinating enzyme 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3U0"}


id: PBO:0089621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apl6","termid":"PBO:0089621"}


id: MONDO:0017375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital viral infections with enteroviruses (EV) including coxsackie viruses and ECHO viruses is an infectious embryofetopathy that have been reported to cause spontaneous abortion, stillbirth, fetal malformations and acute systemic illness in the newborn.","definition_xrefs":["Orphanet:292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enterovirus infectious disease","termid":"MONDO:0005747"},{"relation_name":"is_a","term_name":"infectious embryofetopathy","termid":"MONDO:0016511"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital enterovirus infection","secondary_identifiers":["GARD:2130","UMLS:C4274223","icd11.foundation:1981771784","SCTID:716865000","MEDGEN:904399"],"synonyms":[{"name":"antenatal enterovirus infection","type":"exact"},{"name":"congenital enterovirus infection","type":"exact"},{"name":"congenital enterovirus infectious disease","type":"exact"},{"name":"congenital infection caused by enterovirus","type":"exact"},{"name":"mother-to-child transmission of enterovirus infection","type":"exact"}],"termid":"MONDO:0017375","xrefs":{"Monarch":{"xref_id":"0017375"}}}


id: PR:O94686
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl4302 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L43-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.02c","synonyms":[{"name":"L37B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl4302","type":"exact"}],"termid":"PR:O94686"}


id: PBO:0064250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin","termid":"PBO:0064250"}


id: MONDO:0000928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from the upper or lower eyelid.","definition_xrefs":["NCIT:C4358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous melanoma","termid":"MONDO:0005012"},{"relation_name":"is_a","term_name":"ocular melanoma","termid":"MONDO:0006325"},{"relation_name":"is_a","term_name":"eyelid cancer","termid":"MONDO:0021313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"eyelid melanoma","secondary_identifiers":["MEDGEN:90937","SCTID:231834005","UMLS:C0339116","DOID:10040","ICD9:172.1"],"synonyms":[{"name":"eyelid melanoma","type":"exact"},{"name":"eyelid melanoma (disease)","type":"exact"},{"name":"malignant eyelid melanoma","type":"exact"},{"name":"malignant melanoma of eyelid","type":"exact"},{"name":"malignant melanoma of the eyelid","type":"exact"},{"name":"melanoma (disease) of eyelid","type":"exact"},{"name":"melanoma of eyelid","type":"exact"},{"name":"melanoma of the eyelid","type":"exact"}],"termid":"MONDO:0000928","xrefs":{"Monarch":{"xref_id":"0000928"}}}


id: FYPO:0006016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to urea. Cells stop growing (and may die) at a concentration of urea that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to urea","synonyms":[{"name":"hypersensitive to urea","type":"exact"},{"name":"sensitive to urea during mitotic cell cycle","type":"related"},{"name":"sensitive to urea during vegetative growth","type":"exact"}],"termid":"FYPO:0006016"}


id: GO:0048100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis of the wing disc, a precursor to the wing.","definition_xrefs":["PMID:10625531","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"},{"relation_name":"is_a","term_name":"wing disc pattern formation","termid":"GO:0035222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc anterior/posterior pattern formation","termid":"GO:0048100"}


id: MONDO:0012140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pulmonary function (obsolete MONDO:0012140)","secondary_identifiers":["OMIM:608852"],"synonyms":[{"name":"Plf","type":"related"},{"name":"lung function, accelerated rate of decline In, smoking-related","type":"related"},{"name":"pulmonary function","type":"related"}],"termid":"MONDO:0012140","xrefs":{"Monarch":{"xref_id":"0012140"}}}


id: PBO:0043076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 5 subunit","termid":"PBO:0043076"}


id: GO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Increase in abundance of circular DNA molecules in dividing cells as they age. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and then replicated independently of chromosomal replication.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete extrachromosomal circular DNA accumulation involved in replicative cell aging (obsolete GO:0001307)","synonyms":[{"name":"extrachromosomal circular DNA accumulation during replicative cell ageing","type":"related"},{"name":"extrachromosomal circular DNA accumulation during replicative cell aging","type":"related"}],"termid":"GO:0001307"}


id: FYPO:0000060
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119847],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a single nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"mononucleate","termid":"FYPO:0002731"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"mononucleate vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"mononucleate during vegetative growth","type":"exact"},{"name":"mononucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000060","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0078550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 40","termid":"PBO:0078550"}


id: GO:0140122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Lewy body formation.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inclusion body assembly","termid":"GO:0090083"},{"relation_name":"regulates","term_name":"Lewy body formation","termid":"GO:0140121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of Lewy body formation","termid":"GO:0140122"}


id: PBO:0030498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitotic_DNA_damage_checkpoint_activation","termid":"PBO:0030498"}


id: PR:P04909
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A-alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:19965387","PMID:15226425","PMID:21516229","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-alpha","termid":"PR:000027558"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.08c","secondary_identifiers":["UniProtKB:P04909","PR:000027559"],"synonyms":[{"name":"SPCC622.08C","type":"related"},{"name":"Spom972h-hta1","type":"exact"}],"termid":"PR:P04909"}


id: PBO:0058200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4493","termid":"PBO:0058200"}


id: PBO:0072142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 19","termid":"PBO:0072142"}


id: MONDO:0015808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Folliculotropic mycosis fungoides is a rare variant of mycosis fungoides (MF), a form of cutaneous T-cell lymphoma, and is characterized by the presence of folliculotropic infiltrates in patch-plaque lesions usually involving the head and neck area.","definition_xrefs":["Orphanet:178512"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mycosis fungoides","termid":"MONDO:0009691"},{"relation_name":"is_a","term_name":"secondary catabolic mucinosis of skin","termid":"MONDO:0021655"},{"relation_name":"is_a","term_name":"mycosis fungoides variant","termid":"MONDO:0045071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"folliculotropic mycosis fungoides","secondary_identifiers":["ICD9:701.8","MEDGEN:302080","UMLS:C1627767","icd11.foundation:1335995469","NCIT:C35685","SCTID:404109006","GARD:20154"],"synonyms":[{"name":"alopecia mucinosa (t cell lymphoma)","type":"related"},{"name":"follicular mucinosis type mycosis fungoides","type":"exact"},{"name":"follicular mycosis fungoides","type":"exact"},{"name":"folliculotropic mycosis fungoides","type":"exact"},{"name":"mycosis fungoides-associated follicular mucinosis","type":"exact"}],"termid":"MONDO:0015808","xrefs":{"Monarch":{"xref_id":"0015808"}}}


id: PR:O13711
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC14C4.04 gene.","definition_xrefs":["UniProtKB:O13711","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14C4.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.04","synonyms":[{"name":"Spom972h-SPAC14C4.04","type":"exact"}],"termid":"PR:O13711"}


id: GO:0010489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-4-keto-6-deoxyglucose = UDP-4-keto-rhamnose.","definition_xrefs":["PMID:17190829","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity","termid":"GO:0010489"}


id: GO:0099144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of synaptic membrane (obsolete GO:0099144)","termid":"GO:0099144"}


id: MONDO:0004138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete maxillary sinus adenoid cystic carcinoma (obsolete MONDO:0004138)","termid":"MONDO:0004138","xrefs":{"Monarch":{"xref_id":"0004138"}}}


id: MONDO:0016595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare acute systemic infection caused by the inhalation of Bacillus anthracis spores (e.g. through infected animal products, bioterrorism) and characterized by an initial stage where patients present with non specific symptoms (fever, cough, chills, fatigue) that is followed by an acute phase during which hemorrhagic mediastinitis occurs that can progress into meningitis, gastrointestinal involvement, and refractory shock, that can be fatal, if left untreated.","definition_xrefs":["Orphanet:247257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anthrax infection","termid":"MONDO:0005119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhalational anthrax","secondary_identifiers":["SCTID:11389007","GARD:20657","MESH:C571912","MedDRA:10035667","UMLS:C0155866","DOID:0050160","ICD9:022.1","MEDGEN:57841"],"synonyms":[{"name":"inhalation anthrax","type":"related"},{"name":"inhalation anthrax disease","type":"exact"},{"name":"pulmonary anthrax","type":"exact"},{"name":"respiratory anthrax","type":"exact"},{"name":"respiratory anthrax disease","type":"exact"},{"name":"wool-sorters' disease","type":"exact"},{"name":"woolsorters' disease","type":"exact"}],"termid":"MONDO:0016595","xrefs":{"Monarch":{"xref_id":"0016595"}}}


id: GO:0009899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-copalyl diphosphate = ent-kaur-16-ene + diphosphate.","definition_xrefs":["RHEA:22220","EC:4.2.3.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"ent-kaurene synthase activity","secondary_identifiers":["KEGG_REACTION:R05092","MetaCyc:4.2.3.19-RXN"],"synonyms":[{"name":"ent-copalyl-diphosphate diphosphate-lyase (cyclizing)","type":"related"},{"name":"ent-copalyl-diphosphate diphosphate-lyase (cyclizing, ent-kaurene-forming)","type":"related"},{"name":"ent-kaurene synthase B activity","type":"narrow"},{"name":"ent-kaurene synthetase B activity","type":"narrow"}],"termid":"GO:0009899"}


id: MONDO:0018250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"diffuse palmoplantar keratoderma with painful fissures","secondary_identifiers":["GARD:17595","MEDGEN:1660049","UMLS:C4755309","Orphanet:369999"],"termid":"MONDO:0018250","xrefs":{"Monarch":{"xref_id":"0018250"}}}


id: GO:0032889
data:
  {"annotated_genes":["SJAG_03137","SJAG_03386","SJAG_03072","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97714],"is_not":false,"summary":null,"term":"GO:0032889"},{"annotations":[101770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061192"},{"annotations":[110576,97949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061191"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the fusion of two vacuole membranes to form a single vacuole.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vacuole organization","termid":"GO:0044088"},{"relation_name":"regulates","term_name":"vacuole fusion, non-autophagic","termid":"GO:0042144"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02433":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03386":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vacuole fusion, non-autophagic","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032889","terms_by_termid":{"GO:0032889":null,"GO:0061191":null,"GO:0061192":null}}


id: PBO:0004785
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by osmotic stress","termid":"PBO:0004785"}


id: MONDO:0100287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant hereditary syndrome caused by germline pathogenic POLE variants. It is characterized by the presence of colorectal polyps and colorectal cancer.","direct_ancestors":[{"relation_name":"is_a","term_name":"polyposis","termid":"MONDO:0000147"},{"relation_name":"is_a","term_name":"Polymerase proofreading-related adenomatous polyposis","termid":"MONDO:0018653"},{"relation_name":"is_a","term_name":"polyp of large intestine","termid":"MONDO:0021392"},{"relation_name":"is_a","term_name":"familial colorectal cancer","termid":"MONDO:0023113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"POLE-related polyposis and colorectal cancer syndrome","termid":"MONDO:0100287","xrefs":{"Monarch":{"xref_id":"0100287"}}}


id: GO:1901281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fructoselysine.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosamine catabolic process","termid":"GO:0030392"},{"relation_name":"is_a","term_name":"fructoselysine metabolic process","termid":"GO:0030393"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fructoselysine catabolic process","synonyms":[{"name":"fructosyllysine breakdown","type":"exact"},{"name":"fructosyllysine catabolic process","type":"exact"},{"name":"fructosyllysine catabolism","type":"exact"},{"name":"fructosyllysine degradation","type":"exact"}],"termid":"GO:1901281"}


id: PBO:0017791
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heredopathia Atactica Polyneuritiformis","termid":"PBO:0017791"}


id: MONDO:0019259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classical phenylketonuria is a severe form of phenylketonuria (PKU) an inborn error of amino acid metabolism characterized in untreated patients by severe intellectual deficit and neuropsychiatric complications.","definition_xrefs":["Orphanet:79254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylketonuria","termid":"MONDO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"classic phenylketonuria","secondary_identifiers":["MEDGEN:199655","icd11.foundation:2084504393","GARD:18982","MedDRA:10034875","UMLS:C0751434"],"synonyms":[{"name":"classic PKU","type":"exact"}],"termid":"MONDO:0019259","xrefs":{"Monarch":{"xref_id":"0019259"}}}


id: GO:0010119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stomatal movement.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stomatal movement","termid":"GO:0010119"}


id: GO:1902113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any nucleotide phosphorylation that is involved in DNA repair.","definition_xrefs":["PMID:11729194","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide phosphorylation involved in DNA repair (obsolete GO:1902113)","termid":"GO:1902113"}


id: GO:0055038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a recycling endosome.","definition_xrefs":["GOC:jid","GOC:rph","PMID:10930469","PMID:15601896","PMID:16246101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"recycling endosome","termid":"GO:0055037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005768","GO:0005575"],"is_obsolete":false,"name":"recycling endosome membrane","termid":"GO:0055038"}


id: PBO:0040023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 10 pseudogene 1","termid":"PBO:0040023"}


id: GO:0004121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cystathionine + H2O = L-homocysteine + NH3 + pyruvate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cystathionine beta-lyase activity (obsolete GO:0004121)","termid":"GO:0004121"}


id: PBO:0002498
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds d(GT)n","termid":"PBO:0002498"}


id: MONDO:0004116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the esophagus. It is characterized by the presence of malignant small cells.","definition_xrefs":["NCIT:C6762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"esophageal neuroendocrine tumor","termid":"MONDO:0003649"},{"relation_name":"is_a","term_name":"carcinoma of esophagus","termid":"MONDO:0019086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"esophageal small cell neuroendocrine carcinoma","secondary_identifiers":["DOID:7134","MEDGEN:207270","UMLS:C1112474"],"synonyms":[{"name":"Oat cell carcinoma of esophagus","type":"exact"},{"name":"Oat cell carcinoma of oesophagus","type":"exact"},{"name":"Oat cell carcinoma of the esophagus","type":"exact"},{"name":"Oat cell carcinoma of the oesophagus","type":"exact"},{"name":"esophageal Oat cell carcinoma","type":"exact"},{"name":"esophageal small cell NEC","type":"exact"},{"name":"esophageal small cell carcinoma","type":"exact"},{"name":"esophageal small cell neuroendocrine carcinoma","type":"exact"},{"name":"esophagus Oat cell carcinoma","type":"exact"},{"name":"esophagus small cell carcinoma","type":"exact"},{"name":"oesophagus Oat cell carcinoma","type":"exact"},{"name":"oesophagus small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of esophagus","type":"exact"},{"name":"small cell carcinoma of oesophagus","type":"exact"},{"name":"small cell carcinoma of the esophagus","type":"exact"},{"name":"small cell carcinoma of the oesophagus","type":"exact"},{"name":"small cell carcinoma, esophagus","type":"exact"},{"name":"small cell carcinoma, oesophagus","type":"exact"}],"termid":"MONDO:0004116","xrefs":{"Monarch":{"xref_id":"0004116"}}}


id: GO:0019319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hexose, any monosaccharide with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"hexose biosynthetic process","synonyms":[{"name":"hexose anabolism","type":"exact"},{"name":"hexose biosynthesis","type":"exact"},{"name":"hexose formation","type":"exact"},{"name":"hexose synthesis","type":"exact"}],"termid":"GO:0019319"}


id: PR:Q09718
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-2 complex subunit mu that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 complex subunit mu (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.09c","secondary_identifiers":["UniProtKB:Q09718"],"synonyms":[{"name":"Mu2-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AP2M1","type":"exact"},{"name":"clathrin assembly protein complex 2 mu medium chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin coat assembly protein AP50 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin coat-associated protein AP50 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"plasma membrane adaptor AP-2 50 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09718"}


id: PBO:0040692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCDIN3 domain containing RNA methyltransferase","termid":"PBO:0040692"}


id: PBO:0027927
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_pheromone_and_nitrogen_starvation","termid":"PBO:0027927"}


id: MONDO:0006195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign nodular lesion protruding above the surface of the endometrium. It is composed of a fibrous stroma that contains thick-walled blood vessels and dilated endometrial glands. Polypectomy is the treatment of choice. Only few cases with recurrence have been reported.","definition_xrefs":["NCIT:C6433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"},{"relation_name":"is_a","term_name":"uterine polyp","termid":"MONDO:0004701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrial polyp","secondary_identifiers":["MEDGEN:312370","EFO:1000237","UMLS:C1704273"],"synonyms":[{"name":"endometrial polyp","type":"exact"},{"name":"endometrial stromal polyp","type":"exact"},{"name":"endometrium polyp","type":"exact"},{"name":"polyp of endometrium","type":"exact"},{"name":"polyp of the endometrium","type":"exact"},{"name":"polyp, endometrial stromal, benign","type":"exact"}],"termid":"MONDO:0006195","xrefs":{"Monarch":{"xref_id":"0006195"}}}


id: GO:0003886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxycytidine in DNA + S-adenosyl-L-methionine = a 5-methyl-2'-deoxycytidine in DNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:13681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"DNA-methyltransferase activity","termid":"GO:0009008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0140097","GO:0016741"],"is_obsolete":false,"name":"DNA (cytosine-5-)-methyltransferase activity","secondary_identifiers":["EC:2.1.1.37","GO:0008326","MetaCyc:DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"DNA 5-cytosine methylase activity","type":"related"},{"name":"DNA cytosine C(5) methylase activity","type":"related"},{"name":"DNA cytosine C5 methylase activity","type":"related"},{"name":"DNA cytosine methylase activity","type":"broad"},{"name":"DNA-cytosine 5-methylase activity","type":"related"},{"name":"DNA-cytosine methyltransferase activity","type":"broad"},{"name":"S-adenosyl-L-methionine:DNA (cytosine-5-)-methyltransferase activity","type":"related"},{"name":"cytosine 5-methyltransferase activity","type":"related"},{"name":"cytosine DNA methylase activity","type":"broad"},{"name":"cytosine DNA methyltransferase activity","type":"broad"},{"name":"cytosine-specific DNA methyltransferase activity","type":"related"},{"name":"deoxyribonucleic (cytosine-5-)-methyltransferase activity","type":"related"},{"name":"deoxyribonucleic acid (cytosine-5-)-methyltransferase activity","type":"related"},{"name":"deoxyribonucleic methylase activity","type":"broad"},{"name":"methylphosphotriester-DNA methyltransferase activity","type":"related"},{"name":"modification methylase activity","type":"related"},{"name":"restriction-modification system activity","type":"related"},{"name":"site-specific DNA-methyltransferase (cytosine-specific) activity","type":"narrow"},{"name":"type II DNA methylase activity","type":"related"}],"termid":"GO:0003886"}


id: MONDO:0008121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"onychogryposis, pedal, with keratosis plantaris and coarse hair","secondary_identifiers":["MESH:C563506","OMIM:164680","MEDGEN:331637","UMLS:C1833997"],"synonyms":[{"name":"onychogryposis, pedal, with keratosis plantaris and coarse hair","type":"exact"}],"termid":"MONDO:0008121","xrefs":{"Monarch":{"xref_id":"0008121"}}}


id: GO:0033096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the amyloplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"amyloplast","termid":"GO:0009501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"amyloplast envelope","termid":"GO:0033096"}


id: PBO:0047826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXO6 antisense RNA 1","termid":"PBO:0047826"}


id: PBO:0114287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific cell surface glycoprotein","termid":"PBO:0114287"}


id: PBO:0035954
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_negative_regulation_of_protein_kinase_activity_during_mitosis","termid":"PBO:0035954"}


id: PBO:0084182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone chaperone for Htz1p/H2A-H2B dimer; required for the stabilization of the Chz1p-Htz1-H2B complex; has overlapping function with Nap1p; null mutant displays weak sensitivity to MMS and benomyl; contains a highly conserved CHZ motif; protein abundance increases in response to DNA replication stress","termid":"PBO:0084182"}


id: GO:0002018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an increase in active angiotensin stimulates the adrenal cortices to secrete aldosterone.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of systemic arterial blood pressure","termid":"GO:0003071"},{"relation_name":"is_a","term_name":"regulation of aldosterone secretion","termid":"GO:2000858"},{"relation_name":"part_of","term_name":"regulation of blood volume by renin-angiotensin","termid":"GO:0002016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"renin-angiotensin regulation of aldosterone production","synonyms":[{"name":"renin-angiotensin control of aldosterone production","type":"related"}],"termid":"GO:0002018"}


id: PBO:0090159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component End3","termid":"PBO:0090159"}


id: GO:0032444
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptionally active complex that binds to an activin response element (ARE) in the promoter of target genes, and is composed of two SMAD2 proteins, one SMAD4 protein and a Forkhead activin signal transducer (FAST) transcription factor.","definition_xrefs":["PMID:12374795","PMID:9288972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"activin responsive factor complex","synonyms":[{"name":"ARF complex","type":"exact"}],"termid":"GO:0032444"}


id: PBO:0000936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-mobility group non-histone chromatin protein (predicted)","termid":"PBO:0000936"}


id: GO:0043007
data:
  {"annotated_genes":["SJAG_04855","SJAG_04816","SJAG_00247","SJAG_01050","SJAG_05237","SJAG_03898","SJAG_03997","SJAG_04671","SJAG_05180"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70489,96343,99605,101490],"is_not":false,"summary":null,"term":"GO:0043007"},{"annotations":[104741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045458"},{"annotations":[103541],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[102593,115328,99686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"}]},"cv_name":"biological_process","definition":"Any process involved in sustaining the fidelity and copy number of rDNA repeats.","definition_xrefs":["PMID:14528010","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of DNA repeat elements","termid":"GO:0043570"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_01050":null,"SJAG_03898":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04816":null,"SJAG_04855":null,"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"maintenance of rDNA","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"rDNA maintenance","type":"exact"},{"name":"ribosomal DNA maintenance","type":"exact"}],"termid":"GO:0043007","terms_by_termid":{"GO:0031582":null,"GO:0043007":null,"GO:0045458":null,"GO:1902681":null}}


id: GO:1902627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of assembly of a large subunit precursor of preribosome.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22735702","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"assembly of large subunit precursor of preribosome","termid":"GO:1902626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of assembly of large subunit precursor of preribosome","synonyms":[{"name":"regulation of 66S preribosome assembly","type":"narrow"},{"name":"regulation of 66S preribosome formation","type":"narrow"},{"name":"regulation of preribosome, large subunit precursor formation","type":"exact"}],"termid":"GO:1902627"}


id: PBO:0059811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 37","termid":"PBO:0059811"}


id: FYPO:0000162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which a cellular response to stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cellular response to stress","termid":"FYPO:0000162"}


id: GO:0047286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptide diphthamide + NAD+ = peptide N-(ADP-D-ribosyl)diphthamide + niacinamide.","definition_xrefs":["EC:2.4.2.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"NAD+-diphthamide ADP-ribosyltransferase activity","secondary_identifiers":["RHEA:11820","Reactome:R-HSA-5336421","MetaCyc:RXN-11372"],"synonyms":[{"name":"ADP-ribosyltransferase activity","type":"broad"},{"name":"NAD+:peptide-diphthamide N-(ADP-D-ribosyl)transferase activity","type":"related"},{"name":"NAD-diphthamide ADP-ribosyltransferase activity","type":"exact"},{"name":"mono(ADP-ribosyl)transferase activity","type":"broad"}],"termid":"GO:0047286"}


id: GO:1903494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dehydroepiandrosterone stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:3585228","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dehydroepiandrosterone","termid":"GO:1903494"}


id: GO:0002185
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex having creatine kinase activity.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"creatine kinase complex","termid":"GO:0002185"}


id: PBO:0089679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/TATA-binding protein associated factor/transcription factor TFIID complex subunit Taf5","termid":"PBO:0089679"}


id: FYPO:0001556
data:
  {"alleles_by_uniquename":{"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119506,119507,119510,119514,119519,119522],"is_not":false,"summary":null,"term":"FYPO:0001556"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more nuclear envelope than normal. Excess nuclear envelopes may take the form of intranuclear membrane stacks or invaginations, or small cytoplasmic spheres that are attached to the nucleus, have double lipid bilayer membranes, and may contain structures resembling nuclear pores.","definition_xrefs":["PomBase:mah","PMID:22156749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002403","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"excess nuclear envelope present","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_01906","SJAG_03940","SJAG_02763"],"single_locus_genotype_uniquenames":["nem1delta","nem2delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"excess nuclear envelope present during mitotic cell cycle","type":"related"},{"name":"excess nuclear envelope present during vegetative growth","type":"exact"},{"name":"increased nuclear envelope proliferation","type":"related"},{"name":"nuclear envelope present in greater amount","type":"exact"}],"termid":"FYPO:0001556","terms_by_termid":{"FYPO:0001556":null,"FYPO_EXT:0000001":null}}


id: FYPO:0004369
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in vacuole","termid":"FYPO:0001602"},{"relation_name":"is_a","term_name":"decreased cellular phytochelatin level","termid":"FYPO:0002829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased vacuolar phytochelatin level","synonyms":[{"name":"decreased level of phytochelatin in vacuole","type":"exact"},{"name":"decreased vacuolar phytochelatin level during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar phytochelatin level during vegetative growth","type":"exact"},{"name":"reduced level of phytochelatin in vacuole","type":"exact"},{"name":"reduced vacuolar phytochelatin level","type":"exact"}],"termid":"FYPO:0004369"}


id: GO:1990433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A DNA-binding transcription factor complex consisting of CSL and mastermind proteins in complex with the cleaved, intracellular domain of Notch. It is required for both repression and activation of Notch target genes.","definition_xrefs":["GOC:bhm","PMID:16530045","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"CSL-Notch-Mastermind transcription factor complex","synonyms":[{"name":"CSL-NotchIC-MASTERMIND complex","type":"exact"}],"termid":"GO:1990433"}


id: GO:0018787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorobenzoyl-CoA + H2O = 4-hydroxybenzoyl-CoA + chloride + H+.","definition_xrefs":["RHEA:14853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"4-chlorobenzoyl-CoA dehalogenase activity","secondary_identifiers":["MetaCyc:3.8.1.7-RXN","UM-BBD_enzymeID:r0140","EC:3.8.1.7"],"synonyms":[{"name":"4-chlorobenzoyl CoA chlorohydrolase activity","type":"related"}],"termid":"GO:0018787"}


id: PBO:0079025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 8-1","termid":"PBO:0079025"}


id: MONDO:0015308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laminopathy, type Decaudain-Vigouroux is characterized by severe metabolic alterations (insulin resistance or hyperinsulinaemia, hypertriglyceridaemia with low HDL-cholesterol, and altered glucose tolerance) and muscular hypertrophy, myalgia, or weakness.","definition_xrefs":["Orphanet:137871"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"hyperlipidemia","termid":"MONDO:0021187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"laminopathy type Decaudain-Vigouroux","secondary_identifiers":["SCTID:724205009","MEDGEN:1375333","icd11.foundation:815630778","UMLS:C4518324"],"synonyms":[{"name":"laminopathy with severe metabolic syndrome and myopathy","type":"exact"}],"termid":"MONDO:0015308","xrefs":{"Monarch":{"xref_id":"0015308"}}}


id: GO:0008328
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimeric assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand-gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex.","definition_xrefs":["PMID:20716669","PMID:34753794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel complex","termid":"GO:0034702"},{"relation_name":"is_a","term_name":"neurotransmitter receptor complex","termid":"GO:0098878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"ionotropic glutamate receptor complex","termid":"GO:0008328"}


id: PBO:0075651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain containing 7 pseudogene 1","termid":"PBO:0075651"}


id: PBO:0055732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMO7 antisense RNA 1","termid":"PBO:0055732"}


id: MONDO:0000409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic finding indicating inflammation of the fetal sac membranes. It is characterized by neutrophilic infiltration of the amnion and chorion.","definition_xrefs":["NCIT:C26720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"disorder of extraembryonic membrane","termid":"MONDO:0045013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorioamnionitis","secondary_identifiers":["DOID:0050697","UMLS:C0008495","MEDGEN:3056","MESH:D002821","SCTID:11612004"],"synonyms":[{"name":"fetal membrane inflammation","type":"exact"},{"name":"foetal membrane inflammation","type":"exact"},{"name":"inflammation of fetal membrane","type":"exact"},{"name":"inflammation of foetal membrane","type":"exact"},{"name":"intra-amniotic infection","type":"exact"}],"termid":"MONDO:0000409","xrefs":{"Monarch":{"xref_id":"0000409"}}}


id: PBO:0038686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin alpha 2, smooth muscle","termid":"PBO:0038686"}


id: GO:0008484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of a sulfuric ester bond, an ester formed from sulfuric acid, O=SO(OH)2.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sulfuric ester hydrolase activity","secondary_identifiers":["EC:3.1.6.-"],"synonyms":[{"name":"sulfatase activity","type":"exact"},{"name":"sulphuric ester hydrolase activity","type":"exact"}],"termid":"GO:0008484"}


id: GO:0120081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of microfilament motor activity.","definition_xrefs":["GOC:mah","PMID:20705471","PMID:8621557"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of microfilament motor activity (obsolete GO:0120081)","synonyms":[{"name":"activation of actin-activated ATPase activity","type":"narrow"},{"name":"activation of actin-dependent ATPase activity","type":"narrow"},{"name":"positive regulation of actin filament motor activity","type":"exact"},{"name":"positive regulation of actin-activated ATPase activity","type":"related"},{"name":"positive regulation of actin-dependent ATPase activity","type":"related"},{"name":"positive regulation of actin-filament motor activity","type":"exact"},{"name":"positive regulation of muscle motor activity","type":"narrow"},{"name":"positive regulation of myosin ATPase activity","type":"broad"},{"name":"upregulation of actin-dependent ATPase activity","type":"narrow"}],"termid":"GO:0120081"}


id: PBO:0078440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 6-1","termid":"PBO:0078440"}


id: PBO:0064323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 5","termid":"PBO:0064323"}


id: PBO:0062981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudoautosomal boundary region, X-linked","termid":"PBO:0062981"}


id: PBO:0076067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STPG3 antisense RNA 1","termid":"PBO:0076067"}


id: MONDO:0019433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oligoarticular juvenile arthritis is the most common form of juvenile idiopathic arthritis (JIA), representing nearly 50% of cases.","definition_xrefs":["Orphanet:85410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile idiopathic arthritis","termid":"MONDO:0011429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligoarticular juvenile idiopathic arthritis","secondary_identifiers":["icd11.foundation:1990556904","MEDGEN:443993","NANDO:1200471","EFO:1002019","UMLS:C2931171","MESH:C536312","GARD:4261","ICD10CM:M08.4","NCIT:C119032","NANDO:2201056"],"synonyms":[{"name":"Oligoarticular JIA","type":"exact"},{"name":"Pauciarticular JIA","type":"exact"},{"name":"Pauciarticular chronic arthritis","type":"exact"},{"name":"Pauciarticular juvenile idiopathic arthritis","type":"exact"}],"termid":"MONDO:0019433","xrefs":{"Monarch":{"xref_id":"0019433"}}}


id: MONDO:0012712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystonia with cerebellar atrophy","secondary_identifiers":["OMIM:611694","MESH:C567131","MEDGEN:392987","UMLS:C2673697"],"synonyms":[{"name":"DYTCA","type":"exact"},{"name":"dystonia with cerebellar atrophy","type":"exact"}],"termid":"MONDO:0012712","xrefs":{"Monarch":{"xref_id":"0012712"}}}


id: GO:1900828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-tyrosine.","definition_xrefs":["GOC:TermGenie","PMID:10766779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"D-tyrosine metabolic process","synonyms":[{"name":"D-tyrosine metabolism","type":"exact"}],"termid":"GO:1900828"}


id: GO:1903432
data:
  {"annotated_genes":["SJAG_03501","SJAG_01983","SJAG_03405","SJAG_05346","SJAG_01184","SJAG_03089","SJAG_03928","SJAG_03799","SJAG_04496","SJAG_00457","SJAG_04235","SJAG_00688","SJAG_05184","SJAG_03371","SJAG_02424","SJAG_00875","SJAG_03974","SJAG_00209","SJAG_04910","SJAG_02605","SJAG_04249","SJAG_01187","SJAG_01032","SJAG_03486","SJAG_03072","SJAG_03355","SJAG_00991","SJAG_00561","SJAG_02231","SJAG_02765","SJAG_01142","SJAG_03678","SJAG_00824","SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93237,94394,108157,115784,118098],"is_not":false,"summary":null,"term":"GO:1903432"},{"annotations":[101769,109576,109980,113465,117343,103325,118532,73936,114883,88364,107462,114282,80292,116783,118340,93675,96430,99896,73957,99200,116431,105452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[94658,96431,76237,113167,72888,77143,110849,75788,88652,74398,76628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TORC1 signaling.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TOR signaling","termid":"GO:0032006"},{"relation_name":"regulates","term_name":"TORC1 signaling","termid":"GO:0038202"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00688":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01032":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01187":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02605":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03799":null,"SJAG_03928":null,"SJAG_03974":null,"SJAG_04235":null,"SJAG_04249":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05184":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of TORC1 signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of TORC1 signal transduction","type":"exact"}],"termid":"GO:1903432","terms_by_termid":{"GO:1903432":null,"GO:1904262":null,"GO:1904263":null}}


id: PBO:0044044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and serine rich nuclear protein 1","termid":"PBO:0044044"}


id: GO:0102386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phenylethanol + NADP = phenylacetaldehyde + NADPH + H+.","definition_xrefs":["PMID:17644147","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"phenylacetaldehyde reductase activity","secondary_identifiers":["MetaCyc:RXN-13536"],"termid":"GO:0102386"}


id: MONDO:0043133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"visual epilepsy","termid":"MONDO:0001386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"microcephaly micropenis convulsions","secondary_identifiers":["MEDGEN:444076","UMLS:C2931525","MESH:C537540","GARD:3628"],"synonyms":[{"name":"microcephaly micropenis convulsions","type":"exact"},{"name":"microcephaly micropenis seizures","type":"related"},{"name":"microcephaly seizures genital hypoplasia","type":"related"}],"termid":"MONDO:0043133","xrefs":{"Monarch":{"xref_id":"0043133"}}}


id: GO:1905425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Wnt-mediated midbrain dopaminergic neuron differentiation (obsolete GO:1905425)","synonyms":[{"name":"down regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down regulation of Wg 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id: PBO:0087283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Signal recognition particle (SRP) receptor beta subunit; involved in SRP-dependent protein targeting; anchors the alpha subunit, Srp101p to the ER membrane","termid":"PBO:0087283"}


id: PBO:0116678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 9","termid":"PBO:0116678"}


id: GO:0019187
data:
  {"annotated_genes":["SJAG_02102"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004578"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a mannose residue to an oligosaccharide, forming a beta-(1->4) linkage.","definition_xrefs":["GOC:mcc","PMID:8166646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02102":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-1,4-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"termid":"GO:0019187","terms_by_termid":{"GO:0004578":null}}


id: PBO:0040070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin beta 1","termid":"PBO:0040070"}


id: PBO:0027805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_JM216","termid":"PBO:0027805"}


id: GO:0008214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an alkyl group from a protein amino acid. Alkyl groups are derived from alkanes by removal of one hydrogen atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein dealkylation","synonyms":[{"name":"protein amino acid dealkylation","type":"exact"}],"termid":"GO:0008214"}


id: PBO:0084546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the Puf family of RNA-binding proteins; interacts with mRNAs encoding membrane-associated proteins; involved in localizing the Arp2/3 complex to mitochondria; overexpression causes increased sensitivity to benomyl; JSN1 has a paralog, PUF2, that arose from the whole genome duplication","termid":"PBO:0084546"}


id: PBO:0076041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 38 like","termid":"PBO:0076041"}


id: PATO:0001558
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process inhering in a bearer by virtue of the bearer's lacking a processual part as specified by the additional entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extra or missing processual parts","termid":"PATO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacking processual parts","termid":"PATO:0001558"}


id: PBO:0055252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2679","termid":"PBO:0055252"}


id: GO:0061762
data:
  {"annotated_genes":["SJAG_03501","SJAG_03486","SJAG_03802"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116443,116779,118529],"is_not":false,"summary":null,"term":"GO:0061762"}]},"cv_name":"biological_process","definition":"The series of molecular signals in which calmodulin-dependent protein kinase activity enabled by a CAMKK directly activates an AMPK. The cascade begins with calmodulin binding calcium which in turn binds CAMKK enabling its calmodulin-dependent protein kinase activity. The cascade ends with AMP-activated protein kinase activity.","definition_xrefs":["GOC:PARL","PMID:24709372","PMID:23010169","GOC:pad","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03486":null,"SJAG_03501":null,"SJAG_03802":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"CAMKK-AMPK signaling cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:0061762","terms_by_termid":{"GO:0061762":null}}


id: MONDO:0015886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of type 1 diabetes mellitus that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare diabetes mellitus type 1 (obsolete MONDO:0015886)","secondary_identifiers":["Orphanet:181371"],"synonyms":[{"name":"rare insulin-dependent diabetes mellitus","type":"exact"},{"name":"rare type 1 diabetes mellitus","type":"exact"}],"termid":"MONDO:0015886","xrefs":{"Monarch":{"xref_id":"0015886"}}}


id: PBO:0110404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR11 pseudogene 1","termid":"PBO:0110404"}


id: PBO:0005396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsk1 complex gamma subunit (predicted)","termid":"PBO:0005396"}


id: PBO:0056113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase like 1","termid":"PBO:0056113"}


id: GO:0160079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with glycine and transmitting the signal across the membrane by changing the activity of intracellular G protein signaling.","definition_xrefs":["PMID:36996198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled neurotransmitter receptor activity","termid":"GO:0099528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled glycine receptor activity","synonyms":[{"name":"mGlyR","type":"exact"},{"name":"metabotropic glycine receptor activity","type":"exact"}],"termid":"GO:0160079"}


id: GO:0019627
data:
  {"annotated_genes":["SJAG_01461","SJAG_00412","SJAG_04299","SJAG_04679","SJAG_00635","SJAG_00035","SJAG_02766","SJAG_04896","SJAG_04577","SJAG_03398","SJAG_00392","SJAG_05338","SJAG_01019"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95757,97152,114374],"is_not":false,"summary":null,"term":"GO:0019627"},{"annotations":[58993,65721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043419"},{"annotations":[70876,98493,103761,111390,118689,57800,92801,106835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000050"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving urea, the water soluble compound O=C-(NH2)2.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"},{"relation_name":"is_a","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_02766":null,"SJAG_03398":null,"SJAG_04299":null,"SJAG_04577":null,"SJAG_04679":null,"SJAG_04896":null,"SJAG_05338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0044281","GO:0071941","GO:0008150"],"is_obsolete":false,"name":"urea metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"urea metabolism","type":"exact"}],"termid":"GO:0019627","terms_by_termid":{"GO:0000050":null,"GO:0019627":null,"GO:0043419":null}}


id: PBO:0046755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXOC7 pseudogene 1","termid":"PBO:0046755"}


id: MONDO:0013230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hot water reflex epilepsy","termid":"MONDO:0013229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, hot water, 2","secondary_identifiers":["DOID:0081107","MEDGEN:461886","GARD:18287","UMLS:C3150536","OMIM:613340"],"synonyms":[{"name":"HWE2","type":"related"},{"name":"epilepsy, hot water, 2","type":"exact"}],"termid":"MONDO:0013230","xrefs":{"Monarch":{"xref_id":"0013230"}}}


id: FYPO:0002396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of localization of a protein at a location in heterochromatin at centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"normal maintenance of protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"normal maintenance of protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002396"}


id: MONDO:0033363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 54","secondary_identifiers":["NORD:146101","OMIM:617391","GARD:16225","MEDGEN:1392637","UMLS:C4479319","DOID:0080418"],"synonyms":[{"name":"DEE54","type":"exact"},{"name":"EIEE54","type":"exact"},{"name":"HNRNPU-Related Disorder","type":"exact"},{"name":"developmental and epileptic encephalopathy 54","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 54","type":"exact"}],"termid":"MONDO:0033363","xrefs":{"Monarch":{"xref_id":"0033363"}}}


id: MONDO:0008288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A synovial cyst located in the back of the knee, in the popliteal space arising from the semimembranous bursa or the knee joint.","definition_xrefs":["MESH:D011151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popliteal cyst","secondary_identifiers":["MEDGEN:10853","UMLS:C0032650","SCTID:82675004","ICD9:727.51","OMIM:175750"],"synonyms":[{"name":"baker cyst","type":"related"},{"name":"popliteal cyst","type":"exact"}],"termid":"MONDO:0008288","xrefs":{"Monarch":{"xref_id":"0008288"}}}


id: GO:0042952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A pathway of aromatic compound degradation by ortho-cleavage; one branch converts protocatechuate, derived from phenolic compounds, to beta-ketoadipate, and the other branch converts catechol, generated from various aromatic hydrocarbons, amino aromatics, and lignin monomers, also to beta-ketoadipate. Two additional steps accomplish the conversion of beta-ketoadipate to tricarboxylic acid cycle intermediates.","definition_xrefs":["PMID:8905091","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-ketoadipate pathway","synonyms":[{"name":"ortho-cleavage pathway","type":"broad"}],"termid":"GO:0042952"}


id: PBO:0035773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_protein_movement_within_plasma_membrane_at_cell_tip","termid":"PBO:0035773"}


id: PBO:0044507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytohesin 3","termid":"PBO:0044507"}


id: PBO:0071777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 5","termid":"PBO:0071777"}


id: PBO:0061190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin U","termid":"PBO:0061190"}


id: PBO:0063597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 11 beta","termid":"PBO:0063597"}


id: PR:O42857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tumor suppressor candidate 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12991:SF10","OMA:SCHPO01041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen permease regulator 2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.03c","secondary_identifiers":["UniProtKB:O42857"],"synonyms":[{"name":"Spom972h-NPRL2","type":"exact"}],"termid":"PR:O42857"}


id: MONDO:0020125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of neuromuscular junction disease that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"gene_count":0,"genotype_count":0,"name":"obsolete acquired neuromuscular junction disease (obsolete MONDO:0020125)","secondary_identifiers":["Orphanet:98494"],"synonyms":[{"name":"acquired neuromuscular junction disease","type":"exact"}],"termid":"MONDO:0020125","xrefs":{"Monarch":{"xref_id":"0020125"}}}


id: PBO:0053042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP1B pseudogene 3","termid":"PBO:0053042"}


id: GO:0046073
data:
  {"annotated_genes":["SJAG_03771","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79842,70277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009176"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dTMP metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"dTMP metabolism","type":"exact"}],"termid":"GO:0046073","terms_by_termid":{"GO:0006231":null}}


id: PBO:0046238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 32","termid":"PBO:0046238"}


id: PomGeneEx:0000020
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is present at the same level under one set of conditions or at one indicated time as otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unchanged","termid":"PomGeneEx:0000004"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level unchanged","synonyms":[{"name":"protein expression unchanged","type":"exact"},{"name":"unchanged protein level","type":"exact"}],"termid":"PomGeneEx:0000020"}


id: PBO:0044065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 9-like pseudogene 1","termid":"PBO:0044065"}


id: PBO:0062795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL sphingolipid biosynthesis regulator 1","termid":"PBO:0062795"}


id: FYPO:0007751
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short spindle assembles during the first meiotic nuclear division, and may begin elongation, but does not elongate normally or completely, and collapses during prometaphase I. Upon collapse the spindle may break or shrink.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle collapse during meiosis I","termid":"FYPO:0007103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"spindle collapse during meiotic prometaphase I","synonyms":[{"name":"broken meiotic spindle during prometaphase I","type":"related"},{"name":"meiosis I spindle collapse during prometaphase","type":"exact"},{"name":"meiotic spindle breakage during prometaphase I","type":"exact"},{"name":"meiotic spindle collapse during prometaphase I","type":"exact"},{"name":"spindle collapse during prometaphase I","type":"exact"},{"name":"spindle collapse during prometaphase of meiosis I","type":"exact"}],"termid":"FYPO:0007751"}


id: PBO:0090808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase / phosphopantothenoylcysteine decarboxylase / protein phosphatase inhibitor moonlighting protein Hal3/Tds1","termid":"PBO:0090808"}


id: FYPO:0006711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to a pH above 7.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to alkaline pH","synonyms":[{"name":"abolished protein phosphorylation during cellular response to alkaline pH during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to alkaline pH during vegetative growth","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to high pH","type":"exact"},{"name":"abolished protein phosphorylation in high pH","type":"related"},{"name":"protein phosphorylation abolished during cellular response to alkaline pH","type":"exact"}],"termid":"FYPO:0006711"}


id: GO:0009147
data:
  {"annotated_genes":["SJAG_04657","SJAG_03676","SJAG_05024","SJAG_03708","SJAG_04665","SJAG_04487","SJAG_00885","SJAG_02887","SJAG_00533","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[64617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[76820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[93312,68209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[71369,68982,92780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[79813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[107573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009212"},{"annotations":[64616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine nucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate metabolic process","termid":"GO:0009141"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_00885":null,"SJAG_02887":null,"SJAG_03676":null,"SJAG_03708":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine nucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009147","terms_by_termid":{"GO:0006228":null,"GO:0006235":null,"GO:0006241":null,"GO:0009212":null,"GO:0044210":null,"GO:0044211":null,"GO:0046036":null,"GO:0046081":null}}


id: PBO:0041486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C11orf98 pseudogene 1","termid":"PBO:0041486"}


id: MONDO:0011517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertension due to gain-of-function mutations in the mineralocorticoid receptor is a rare genetic hypertension characterized by a familial severe hypertension with an onset before age 20 years, associated with suppressed plasma renin and low aldosterone levels in the presence of low or normal levels of the mineralocorticoid aldosterone, that is highly resistant to antihypertensive medication. During pregnancy, there is a marked exacerbation of hypertension, accompanied by low serum potassium levels and undetectable aldosterone levels, but without signs of preeclampsia, requiring early delivery.","definition_xrefs":["Orphanet:88660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudohyperaldosteronism type 2","secondary_identifiers":["SCTID:766937004","UMLS:C1854631","MEDGEN:343170","GARD:19093","MESH:C565359","icd11.foundation:538048714","OMIM:605115"],"synonyms":[{"name":"early-onset hypertension with exacerbation in pregnancy","type":"exact"},{"name":"hypertension due to gain-of-function mutations in the mineralocorticoid receptor","type":"exact"},{"name":"hypertension, early-onset, autosomal dominant, with Severe exacerbation in pregnancy","type":"related"},{"name":"hypertension, early-onset, autosomal dominant, with exacerbation in pregnancy","type":"exact"},{"name":"hypertension, early-onset, autosomal dominant, with severe exacerbation in pregnancy","type":"related"}],"termid":"MONDO:0011517","xrefs":{"Monarch":{"xref_id":"0011517"}}}


id: GO:0061429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving oleic acid that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:20395639","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription from RNA polymerase II promoter","termid":"GO:0000436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"positive regulation of transcription from RNA polymerase II promoter by oleic acid","termid":"GO:0061429"}


id: GO:0002811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antifungal peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antifungal peptide production","termid":"GO:0002789"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002806"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide biosynthetic process","termid":"GO:0002810"},{"relation_name":"negatively_regulates","term_name":"antifungal peptide biosynthetic process","termid":"GO:0002783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of antifungal peptide biosynthetic process","synonyms":[{"name":"down regulation of antifungal peptide biosynthetic process","type":"exact"},{"name":"down-regulation of antifungal peptide biosynthetic process","type":"exact"},{"name":"downregulation of antifungal peptide biosynthetic process","type":"exact"},{"name":"inhibition of antifungal peptide biosynthetic process","type":"narrow"}],"termid":"GO:0002811"}


id: PBO:0054506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1906","termid":"PBO:0054506"}


id: PBO:0078193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-3 (non-functional)","termid":"PBO:0078193"}


id: PBO:0078989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (anticodon TTA) 2-1","termid":"PBO:0078989"}


id: PBO:0086270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein tyrosine phosphatase; involved in cell cycle control and retrograde protein transport; regulates the phosphorylation state of Cdc28p; modulates phosphorylation of retromer component Vps26p; homolog of S. pombe cdc25","termid":"PBO:0086270"}


id: GO:0002293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive alpha-beta T cell acquires the specialized features of an effector, regulatory, or memory T cell during an immune response. Effector T cells include cells which provide T cell help or exhibit cytotoxicity towards other cells.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell activation involved in immune response","termid":"GO:0002287"},{"relation_name":"is_a","term_name":"T cell differentiation involved in immune response","termid":"GO:0002292"},{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell differentiation involved in immune response","synonyms":[{"name":"alpha-beta T cell development involved in immune response","type":"related"},{"name":"alpha-beta T cell differentiation during immune response","type":"related"},{"name":"alpha-beta T lymphocyte differentiation during immune response","type":"related"},{"name":"alpha-beta T-cell differentiation during immune response","type":"related"},{"name":"alpha-beta T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002293"}


id: PBO:0005770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin (predicted)","termid":"PBO:0005770"}


id: GO:0047129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-2-[(R)-1-carboxyethylamino]pentanoate + H2O + NAD+ = L-2-aminopentanoate + H+ + NADH + pyruvate.","definition_xrefs":["EC:1.5.1.28","RHEA:21592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"opine dehydrogenase activity","secondary_identifiers":["MetaCyc:1.5.1.28-RXN","KEGG_REACTION:R03732"],"synonyms":[{"name":"(2S)-2-{[1-(R)-carboxyethyl]amino}pentanoate dehydrogenase (NAD, L-aminopentanoate-forming)","type":"related"},{"name":"(2S)-2-{[1-(R)-carboxyethyl]amino}pentanoate:NAD+ oxidoreductase (L-aminopentanoate-forming)","type":"related"}],"termid":"GO:0047129"}


id: GO:0018544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-carboxy-4'-sulfoazobenzene + 4 H+ + 4 e- = 4-aminobenzoate + 4-aminobenzenesulfonate.","definition_xrefs":["UM-BBD_reactionID:r0543"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-carboxy-4'-sulfoazobenzene reductase activity (obsolete GO:0018544)","synonyms":[{"name":"4-carboxy-4'-sulphoazobenzene reductase activity","type":"exact"}],"termid":"GO:0018544"}


id: GO:0018499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-2,3-dihydrodiol DDT + NADP+ = NADPH + 2,3-dihydroxy DDT.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-2,3-dihydrodiol DDT dehydrogenase activity (obsolete GO:0018499)","termid":"GO:0018499"}


id: PATO:0001156
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001156 relative concentration (obsolete PATO:0001156)","termid":"PATO:0001156"}


id: PBO:0108679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha/Beta hydrolase fold, DUF1749 family protein, implicated in siderophore metabolism","termid":"PBO:0108679"}


id: MONDO:0003750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor of the central nervous system occurring in children.","definition_xrefs":["NCIT:C6205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system germ cell tumor","termid":"MONDO:0003000"},{"relation_name":"is_a","term_name":"childhood germ cell tumor","termid":"MONDO:0003751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood central nervous system germ cell tumor","secondary_identifiers":["DOID:6052","UMLS:C0278754","MEDGEN:124505"],"synonyms":[{"name":"central nervous system childhood germ cell tumor","type":"exact"},{"name":"central nervous system childhood germ cell tumour","type":"exact"},{"name":"central nervous system germ cell tumor","type":"broad"},{"name":"central nervous system germ cell tumour","type":"broad"},{"name":"central nervous system paediatric germ cell cancer","type":"exact"},{"name":"central nervous system pediatric germ cell cancer","type":"exact"},{"name":"childhood CNS germ cell neoplasm","type":"exact"},{"name":"childhood CNS germ cell tumor","type":"exact"},{"name":"childhood CNS germ cell tumour","type":"exact"},{"name":"childhood central nervous system germ cell neoplasm","type":"exact"},{"name":"childhood central nervous system germ cell tumor","type":"exact"},{"name":"childhood germ cell neoplasm of CNS","type":"exact"},{"name":"childhood germ cell neoplasm of central nervous system","type":"exact"},{"name":"childhood germ cell neoplasm of the CNS","type":"exact"},{"name":"childhood germ cell neoplasm of the central nervous system","type":"exact"},{"name":"childhood germ cell tumor of CNS","type":"exact"},{"name":"childhood germ cell tumor of central nervous system","type":"exact"},{"name":"childhood germ cell tumor of the CNS","type":"exact"},{"name":"childhood germ cell tumor of the central nervous system","type":"exact"},{"name":"childhood germ cell tumour of CNS","type":"exact"},{"name":"childhood germ cell tumour of central nervous system","type":"exact"},{"name":"childhood germ cell tumour of the CNS","type":"exact"},{"name":"childhood germ cell tumour of the central nervous system","type":"exact"},{"name":"paediatric CNS germ cell neoplasm","type":"exact"},{"name":"paediatric CNS germ cell tumour","type":"exact"},{"name":"paediatric central nervous system germ cell neoplasm","type":"exact"},{"name":"paediatric central nervous system germ cell tumour","type":"exact"},{"name":"paediatric germ cell neoplasm of CNS","type":"exact"},{"name":"paediatric germ cell neoplasm of central nervous system","type":"exact"},{"name":"paediatric germ cell neoplasm of the CNS","type":"exact"},{"name":"paediatric germ cell neoplasm of the central nervous system","type":"exact"},{"name":"paediatric germ cell tumour of CNS","type":"exact"},{"name":"paediatric germ cell tumour of central nervous system","type":"exact"},{"name":"paediatric germ cell tumour of the CNS","type":"exact"},{"name":"paediatric germ cell tumour of the central nervous system","type":"exact"},{"name":"pediatric CNS germ cell neoplasm","type":"exact"},{"name":"pediatric CNS germ cell tumor","type":"exact"},{"name":"pediatric central nervous system germ cell neoplasm","type":"exact"},{"name":"pediatric central nervous system germ cell tumor","type":"exact"},{"name":"pediatric germ cell neoplasm of CNS","type":"exact"},{"name":"pediatric germ cell neoplasm of central nervous system","type":"exact"},{"name":"pediatric germ cell neoplasm of the CNS","type":"exact"},{"name":"pediatric germ cell neoplasm of the central nervous system","type":"exact"},{"name":"pediatric germ cell tumor of CNS","type":"exact"},{"name":"pediatric germ cell tumor of central nervous system","type":"exact"},{"name":"pediatric germ cell tumor of the CNS","type":"exact"},{"name":"pediatric germ cell tumor of the central nervous system","type":"exact"}],"termid":"MONDO:0003750","xrefs":{"Monarch":{"xref_id":"0003750"}}}


id: MONDO:0002099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Histoplasma capsulatum.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histoplasmosis","termid":"MONDO:0018312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histoplasma capsulatum infectious disease","secondary_identifiers":["ICD9:115.00","DOID:1759","SCTID:76255006","ICD9:115.0"],"synonyms":[{"name":"American histoplasmosis","type":"related"},{"name":"Histoplasma capsulatum caused disease or disorder","type":"exact"},{"name":"Histoplasma capsulatum disease or disorder","type":"exact"},{"name":"classical histoplasmosis","type":"related"},{"name":"darling's disease","type":"related"},{"name":"infection by Histoplasma capsulatum","type":"exact"},{"name":"infection caused by Histoplasma capsulatum","type":"related"},{"name":"small form histoplasmosis","type":"related"}],"termid":"MONDO:0002099","xrefs":{"Monarch":{"xref_id":"0002099"}}}


id: MONDO:0011861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breath-holding Spells","secondary_identifiers":["OMIM:607578","MEDGEN:105400","UMLS:C0476287"],"synonyms":[{"name":"Bhs","type":"related"},{"name":"breath-holding Spells","type":"exact"}],"termid":"MONDO:0011861","xrefs":{"Monarch":{"xref_id":"0011861"}}}


id: PBO:0080861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 2","termid":"PBO:0080861"}


id: PBO:0082342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase, also known as pontin; member of the AAA+ and RuvB-like protein families; similar to Rvb2p; conserved component of multiple complexes including the INO80 complex, the Swr1 complex, and the R2TP complex (Rvb1-Rvb2-Tah1-Pih1); involved in multiple processes such as chromatin remodeling, box C/D snoRNP assembly, and RNA polymerase II assembly","termid":"PBO:0082342"}


id: GO:0019580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactarate, an anion of galactaric acid, the meso-aldaric acid derived from both D- and L-galactose.","definition_xrefs":["ISBN:0198506732","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"galactarate metabolic process","secondary_identifiers":["GO:0046393"],"synonyms":[{"name":"D-galactarate metabolic process","type":"related"},{"name":"D-galactarate metabolism","type":"related"},{"name":"galactarate metabolism","type":"exact"},{"name":"mucic acid metabolic process","type":"exact"},{"name":"mucic acid metabolism","type":"exact"}],"termid":"GO:0019580"}


id: RO:0002444
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"interacts_with_via_parasite-host_interaction","termid":"RO:0002443"},{"relation_name":"is_a","term_name":"has_host","termid":"RO:0002454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasite_of","synonyms":[{"name":"direct parasite of","type":"exact"}],"termid":"RO:0002444"}


id: PBO:0030175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-slow_cell_population_growth_during_recovery_from_stationary_phase","termid":"PBO:0030175"}


id: MONDO:1011451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic pulmonary fibrosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumonia, non-human animal","termid":"MONDO:0700110"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"idiopathic disease, non-human animal","termid":"MONDO:1011323"},{"relation_name":"is_a","term_name":"premature aging syndrome, non-human animal","termid":"MONDO:1011350"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic pulmonary fibrosis, non-human animal","secondary_identifiers":["OMIA:001417"],"termid":"MONDO:1011451","xrefs":{"Monarch":{"xref_id":"1011451"}}}


id: GO:0102491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dGTP + 2 H2O = dGMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dGTP phosphohydrolase activity (obsolete GO:0102491)","termid":"GO:0102491"}


id: GO:2000649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transport","termid":"GO:1902305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of sodium ion transmembrane transporter activity","synonyms":[{"name":"regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000649"}


id: PBO:0081547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 467","termid":"PBO:0081547"}


id: PBO:0090740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase Oma1","termid":"PBO:0090740"}


id: GO:0097539
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nine-bladed, propeller-like protein complex that links the distal end of the basal body and the cilium to the plasma membrane. Functions in protein sorting and gating (i.e. active and passive transport of proteins in and out of the cilium).","definition_xrefs":["GOC:cilia","GOC:krc","PMID:24231678","PMID:5064817","PMID:5335827","PMID:22653444","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ciliary transition fiber","synonyms":[{"name":"centriolar distal appendage","type":"related"},{"name":"cilial transition fiber","type":"exact"},{"name":"cilial transition fibre","type":"exact"},{"name":"ciliary transition fibre","type":"exact"},{"name":"cilium transition fiber","type":"exact"},{"name":"cilium transition fibre","type":"exact"},{"name":"distal appendage of basal body","type":"related"},{"name":"distal appendage of centriole","type":"related"},{"name":"distal appendage of mother centriole","type":"related"},{"name":"transition fiber","type":"broad"},{"name":"transition fibre","type":"broad"}],"termid":"GO:0097539"}


id: PBO:0063940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl cis/trans isomerase, NIMA-interacting 1","termid":"PBO:0063940"}


id: PBO:0086646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the membrane of vacuole with cell cycle-correlated morphology","termid":"PBO:0086646"}


id: GO:0043195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters. The axon terminus is considered to be the whole region of thickening and the terminal bouton is a specialized region of it.","definition_xrefs":["GOC:nln","PMID:8409967","GOC:dph","PMID:10218156","GOC:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynapse","termid":"GO:0098793"},{"relation_name":"part_of","term_name":"axon terminus","termid":"GO:0043679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"terminal bouton","secondary_identifiers":["NIF_Subcellular:sao187426937"],"synonyms":[{"name":"bouton","type":"exact"},{"name":"presynaptic bouton","type":"exact"},{"name":"synaptic bouton","type":"exact"},{"name":"terminal button","type":"exact"}],"termid":"GO:0043195"}


id: FYPO:0005366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein phosphorylation during mitosis","synonyms":[{"name":"abolished protein phosphorylation during M phase of mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein phosphorylation during mitotic M phase","type":"related"},{"name":"protein phosphorylation abolished during mitosis","type":"exact"}],"termid":"FYPO:0005366"}


id: GO:0120172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin filament bundle convergence involved in mitotic contractile ring assembly.","definition_xrefs":["GOC:vw","PMID:24798735"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin filament bundle convergence involved in mitotic contractile ring assembly (obsolete GO:0120172)","termid":"GO:0120172"}


id: GO:0060806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of cell differentiation that contributes to the progression of the placenta over time, from its initial condition to its mature state.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of cell differentiation involved in embryonic placenta development","termid":"GO:0060800"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell differentiation involved in embryonic placenta development","termid":"GO:0060806"}


id: PBO:0031208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_activation_of_bipolar_cell_growth","termid":"PBO:0031208"}


id: GO:0032204
data:
  {"annotated_genes":["SJAG_03624","SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"},{"annotations":[77245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032210"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02194":null,"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"regulation of telomere maintenance","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032204","terms_by_termid":{"GO:0032210":null,"GO:0032215":null}}


id: PR:O94348
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein YIPF5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21236:SF2","PRO:DNx","OMA:SCHPO04686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein yip1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC61.04c","secondary_identifiers":["UniProtKB:O94348"],"synonyms":[{"name":"Spom972h-YIPF5","type":"exact"}],"termid":"PR:O94348"}


id: PBO:0079074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-2","termid":"PBO:0079074"}


id: PBO:0086058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with ribosomes; has a putative RNA binding domain; in mammals the corresponding protein, eIF2D, has been shown to possess translation initiation factor activity","termid":"PBO:0086058"}


