# terms

id: MONDO:0006906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pigmented villonodular synovitis (obsolete MONDO:0006906)","termid":"MONDO:0006906","xrefs":{"Monarch":{"xref_id":"0006906"}}}


id: MONDO:0018503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of stomach, salivary gland type","secondary_identifiers":["Orphanet:423781"],"synonyms":[{"name":"gastric carcinoma, salivary gland type","type":"exact"}],"termid":"MONDO:0018503","xrefs":{"Monarch":{"xref_id":"0018503"}}}


id: PBO:0069645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 922, pseudogene","termid":"PBO:0069645"}


id: MONDO:0002779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extraskeletal chondroma usually arising from the dura.","definition_xrefs":["NCIT:C7001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"soft tissue chondroma","termid":"MONDO:0006423"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system chondroma","secondary_identifiers":["MEDGEN:272474","UMLS:C1333019","DOID:3813"],"synonyms":[{"name":"CNS chondroma","type":"exact"},{"name":"CNS osteochondroma","type":"exact"},{"name":"central nervous system chondroma","type":"exact"},{"name":"central nervous system osteochondroma","type":"exact"},{"name":"chondroma of CNS","type":"exact"},{"name":"chondroma of central nervous system","type":"exact"},{"name":"chondroma of the CNS","type":"exact"},{"name":"chondroma of the central nervous system","type":"exact"},{"name":"osteochondroma of CNS","type":"exact"},{"name":"osteochondroma of central nervous system","type":"exact"},{"name":"osteochondroma of the CNS","type":"exact"},{"name":"osteochondroma of the central nervous system","type":"exact"}],"termid":"MONDO:0002779","xrefs":{"Monarch":{"xref_id":"0002779"}}}


id: PBO:0088497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic lysine-tRNA ligase Krs1","termid":"PBO:0088497"}


id: PBO:0087839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Third subunit of DNA polymerase delta; involved in chromosomal DNA replication; required for error-prone DNA synthesis in the presence of DNA damage and processivity; forms a complex with Rev3p, Rev7p and Pol31p; interacts with Hys2p, PCNA (Pol30p), and Pol1p","termid":"PBO:0087839"}


id: MONDO:0011270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 8","secondary_identifiers":["OMIM:602759","UMLS:C1864472","MESH:C566426","MEDGEN:400539","GARD:15351"],"synonyms":[{"name":"HPC8","type":"related"},{"name":"predisposing for prostate cancer","type":"related"},{"name":"prostate cancer, hereditary, 8","type":"exact"},{"name":"prostate cancer, hereditary, type 8","type":"exact"},{"name":"prostate cancer, susceptibility to","type":"related"}],"termid":"MONDO:0011270","xrefs":{"Monarch":{"xref_id":"0011270"}}}


id: PBO:0029500
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_elongated_vegetative_cell","termid":"PBO:0029500"}


id: PBO:0079771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFM1 specific peptidase 1 (inactive)","termid":"PBO:0079771"}


id: MONDO:0000185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polyposis syndrome, hereditary mixed (obsolete MONDO:0000185)","termid":"MONDO:0000185","xrefs":{"Monarch":{"xref_id":"0000185"}}}


id: GO:0006439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Hydrolysis of the peptidyl-tRNA by aminoacyl-tRNA hydrolase upon termination of translation. Analogous to usual peptidyl transfer during elongation, except that the acceptor is H2O instead of an aminoacyl-tRNA.","definition_xrefs":["ISBN:019879276X"],"gene_count":0,"genotype_count":0,"name":"obsolete aminoacyl-tRNA hydrolase reaction (obsolete GO:0006439)","synonyms":[{"name":"aminoacyl-tRNA hydrolase reaction","type":"exact"}],"termid":"GO:0006439"}


id: MONDO:0020532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spirillary rat-bite fever (RBF), also known as Sodoku (Japanese for so: rat and doku: poison), is caused by the gram-negative bacillus Spirillum minus and is transmitted to humans through the bites and scratches of rats. The disease is mostly present in Asia.","definition_xrefs":["Orphanet:99903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"rat-bite fever","termid":"MONDO:0006941"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spirillary rat-bite fever","secondary_identifiers":["ICD9:026.0","MEDGEN:57745","icd11.foundation:1104357482","SCTID:19044004","UMLS:C0152062","GARD:19701","DOID:12096"],"synonyms":[{"name":"Spirillary fever","type":"exact"},{"name":"sodoku","type":"exact"},{"name":"sodoku disease","type":"exact"},{"name":"spirillosis","type":"related"}],"termid":"MONDO:0020532","xrefs":{"Monarch":{"xref_id":"0020532"}}}


id: PBO:0003448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidyl-N-methylethanolamine N-methyltransferase (predicted)","termid":"PBO:0003448"}


id: PBO:0005098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-associated protein Dis1","termid":"PBO:0005098"}


id: SO:0001115
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A left handed helix is a region of peptide where the coiled conformation turns in an anticlockwise, left handed screw.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_helix","termid":"SO:0001114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"left_handed_peptide_helix","secondary_identifiers":["BS:00222"],"synonyms":[{"name":"helix-l","type":"related"},{"name":"left handed helix","type":"exact"}],"termid":"SO:0001115"}


id: GO:0160086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a polar microtubule.","definition_xrefs":["PMID:34080538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle microtubule","termid":"GO:1902889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to polar microtubule","termid":"GO:0160086"}


id: PR:O94349
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC61.05 gene.","definition_xrefs":["UniProtKB:O94349","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C61.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC61.05","synonyms":[{"name":"Spom972h-SPCC61.05","type":"exact"}],"termid":"PR:O94349"}


id: MONDO:0020516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thymic neuroendocrine carcinoma is a type of thymic epithelial neoplasm displaying evidence of neuroendocrine differentiation.","definition_xrefs":["Orphanet:99869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine carcinoma","termid":"MONDO:0002120"},{"relation_name":"is_a","term_name":"thymic carcinoma","termid":"MONDO:0006451"},{"relation_name":"is_a","term_name":"thymic neuroendocrine tumor","termid":"MONDO:0019964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"thymic neuroendocrine carcinoma","secondary_identifiers":["NCIT:C171031","MEDGEN:900590","GARD:19696","icd11.foundation:381956131","SCTID:716653001","UMLS:C2210965"],"synonyms":[{"name":"neuroendocrine carcinoma of thymus","type":"exact"},{"name":"thymic neuroendocrine carcinoma","type":"exact"},{"name":"thymus neuroendocrine carcinoma","type":"exact"}],"termid":"MONDO:0020516","xrefs":{"Monarch":{"xref_id":"0020516"}}}


id: GO:0050180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phloretin = H+ + phloretate + phloroglucinol.","definition_xrefs":["RHEA:23396","EC:3.7.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phloretin hydrolase activity","secondary_identifiers":["KEGG_REACTION:R02901","MetaCyc:PHLORETIN-HYDROLASE-RXN"],"synonyms":[{"name":"2',4,4',6'-tetrahydroxydehydrochalcone 1,3,5-trihydroxybenzenehydrolase activity","type":"related"},{"name":"lactase-phlorizin hydrolase","type":"broad"}],"termid":"GO:0050180"}


id: GO:0034873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: thioacetamide + O2 + 2 H+ + 2 e- = thioacetamide S-oxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete thioacetamide S-oxygenase activity (obsolete GO:0034873)","termid":"GO:0034873"}


id: PBO:0066684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, LIM domain interacting pseudogene 2","termid":"PBO:0066684"}


id: GO:1905686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of plasma membrane repair.","definition_xrefs":["GO_REF:0000058","GOC:bhm","GOC:TermGenie","PMID:22940583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of plasma membrane repair","termid":"GO:1905684"},{"relation_name":"positively_regulates","term_name":"plasma membrane repair","termid":"GO:0001778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"positive regulation of plasma membrane repair","synonyms":[{"name":"activation of plasma membrane repair","type":"narrow"},{"name":"up regulation of plasma membrane repair","type":"exact"},{"name":"up-regulation of plasma membrane repair","type":"exact"},{"name":"upregulation of plasma membrane repair","type":"exact"}],"termid":"GO:1905686"}


id: PBO:0035759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9K14_acetylation_during_vegetative_growth","termid":"PBO:0035759"}


id: GO:0047529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-2,3-dimethylmalate = propanoate + pyruvate.","definition_xrefs":["RHEA:10472","EC:4.1.3.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"2,3-dimethylmalate lyase activity","secondary_identifiers":["KEGG_REACTION:R01355","MetaCyc:23-DIMETHYLMALATE-LYASE-RXN"],"synonyms":[{"name":"(2R,3S)-2,3-dimethylmalate pyruvate-lyase (propanoate-forming)","type":"related"},{"name":"(2R,3S)-2,3-dimethylmalate pyruvate-lyase activity","type":"related"},{"name":"2,3-dimethylmalate pyruvate-lyase activity","type":"related"}],"termid":"GO:0047529"}


id: FYPO:0000890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000883"},{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000885"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation at centromere outer repeat during vegetative growth","termid":"FYPO:0003096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 trimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at pericentric region during vegetative growth","type":"related"},{"name":"decreased histone H3-K9 trimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased histone H3K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000890"}


id: FYPO:0007741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is abnormal during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein distribution along RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"abnormal protein distribution across RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"abnormal protein distribution along RNA polymerase II-regulated genes during mitotic metaphase","type":"exact"},{"name":"abnormal protein distribution along RNA polymerase II-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"abnormal protein distribution along RNA polymerase II-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"abnormal protein distribution in chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"abnormal protein localization to chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007741"}


id: GO:0070907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidine(out) + histamine(in) = L-histidine(in) + histamine(out).","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-histidine transmembrane transporter activity","termid":"GO:0005290"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"histamine transmembrane transporter activity","termid":"GO:0160173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-histidine:histamine antiporter activity","synonyms":[{"name":"histidine-histamine antiporter activity","type":"exact"},{"name":"histidine/histamine antiporter activity","type":"exact"},{"name":"histidine:histamine antiporter activity","type":"broad"}],"termid":"GO:0070907"}


id: GO:0018097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of the chromophore S-4-hydroxycinnamyl-L-cysteine.","definition_xrefs":["RESID:AA0207"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage via peptidyl-S-4-hydroxycinnamyl-L-cysteine (obsolete GO:0018097)","synonyms":[{"name":"protein amino acid cinnamylation","type":"broad"}],"termid":"GO:0018097"}


id: PBO:0048600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ghrelin and obestatin prepropeptide","termid":"PBO:0048600"}


id: PBO:0047961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRAT regulator of WNT signaling pathway 1","termid":"PBO:0047961"}


id: PBO:0063607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet factor 4 variant 1","termid":"PBO:0063607"}


id: MONDO:0002285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the pupil.","direct_ancestors":[{"relation_name":"is_a","term_name":"iris disorder","termid":"MONDO:0002289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pupil disorder","secondary_identifiers":["MEDGEN:11038","SCTID:68633000","DOID:238","UMLS:C0034124"],"synonyms":[{"name":"disease of pupil","type":"exact"},{"name":"disease or disorder of pupil","type":"exact"},{"name":"disorder of pupil","type":"exact"},{"name":"pupil disease","type":"exact"},{"name":"pupil disease or disorder","type":"exact"},{"name":"pupillary disorder","type":"exact"}],"termid":"MONDO:0002285","xrefs":{"Monarch":{"xref_id":"0002285"}}}


id: MONDO:0010226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 2","secondary_identifiers":["MESH:C535601","GARD:9159","UMLS:C1848296","DOID:0111777","MEDGEN:341190","NANDO:1200404","OMIM:300018"],"synonyms":[{"name":"46,XY SEX reversal 2","type":"related"},{"name":"46,XY Sex reversal type 2","type":"exact"},{"name":"46,XY Sex reversal, Dax1-related","type":"related"},{"name":"46,XY sex reversal 2","type":"exact"},{"name":"46XY sex reversal 2, dosage-sensitive","type":"exact"},{"name":"SRXY2","type":"related"},{"name":"dosage-sensitive Sex reversal","type":"related"}],"termid":"MONDO:0010226","xrefs":{"Monarch":{"xref_id":"0010226"}}}


id: MONDO:1012946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any skeletal dysplasia that occurs in dogs due to a mutation in the PCYT1A gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, PCYT1A-related, dog","secondary_identifiers":["OMIA:002606-9615"],"synonyms":[{"name":"SD3","type":"exact"},{"name":"disproportionate dwarfism","type":"related"},{"name":"skeletal dysplasia 3, PCYT1A-related, dog","type":"exact"},{"name":"skeletal dysplasia 3, dog","type":"related"}],"termid":"MONDO:1012946","xrefs":{"Monarch":{"xref_id":"1012946"}}}


id: PBO:0055011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2426","termid":"PBO:0055011"}


id: PBO:0067765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 65","termid":"PBO:0067765"}


id: PBO:0036494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate lyase superfamily, bacterial 3-carboxy-cis,cis-muconate cycloisomerase related","termid":"PBO:0036494"}


id: FYPO:0005360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the RTS1 replication termination site prevents replication fork movement in the opposite of normal direction. Normally, RTS1 acts as a barrier to replication forks moving in the cenII-distal direction.","definition_xrefs":["PMID:18723894","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at mating-type locus","termid":"FYPO:0003083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"reversed RTS1 barrier polarity","synonyms":[{"name":"reversed RTS1 barrier polarity during mitotic cell cycle","type":"related"},{"name":"reversed RTS1 barrier polarity during vegetative growth","type":"exact"}],"termid":"FYPO:0005360"}


id: FYPO:0000214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"abnormal chromosome condensation","termid":"FYPO:0000159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0000337"],"is_obsolete":false,"name":"abnormal mitotic chromosome condensation","synonyms":[{"name":"abnormal chromosome condensation during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic chromosome condensation during vegetative growth","type":"exact"}],"termid":"FYPO:0000214"}


id: PBO:0060243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC proto-oncogene, bHLH transcription factor","termid":"PBO:0060243"}


id: PBO:0086944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor for a factor pheromone; couples to MAP kinase cascade to mediate pheromone response; transcribed in alpha cells and required for mating by alpha cells, ligand bound receptors endocytosed and recycled to the plasma membrane; GPCR","termid":"PBO:0086944"}


id: PBO:0002682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA snoRNP complex subunit Nhp2","termid":"PBO:0002682"}


id: PBO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.1.2","termid":"PBO:0000837"}


id: GO:0061228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric nephron are generated and organized. A mesonephric nephron is the functional unit of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron morphogenesis","termid":"GO:0072028"},{"relation_name":"part_of","term_name":"mesonephros morphogenesis","termid":"GO:0061206"},{"relation_name":"part_of","term_name":"mesonephric nephron development","termid":"GO:0061215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}


id: GO:2000397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ubiquitin-dependent endocytosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"positive regulation of protein transport","termid":"GO:0051222"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-dependent endocytosis","termid":"GO:2000395"},{"relation_name":"positively_regulates","term_name":"ubiquitin-dependent endocytosis","termid":"GO:0070086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of ubiquitin-dependent endocytosis","synonyms":[{"name":"positive regulation of ubiquitin-mediated endocytosis","type":"exact"}],"termid":"GO:2000397"}


id: MONDO:0006131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, WHO grade II cerebellar neoplasm which shows consistent neuronal, variable astrocytic and focal lipomatous differentiation. It occurs in adults, has a low proliferative potential and usually has a favorable prognosis. (Adapted from WHO)","definition_xrefs":["NCIT:C6905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar neoplasm","termid":"MONDO:0002913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar liponeurocytoma","secondary_identifiers":["EFO:1000159","ONCOTREE:CLNC","Orphanet:251931","MEDGEN:237160","GARD:10642","UMLS:C1370507","DOID:6458","ICDO:0000/0","SCTID:716592003"],"synonyms":[{"name":"CLNC","type":"related"},{"name":"cerebellar liponeurocytoma","type":"exact"},{"name":"cerebellar liponeurocytoma (WHO grade II)","type":"exact"},{"name":"lipomatous medulloblastoma","type":"exact"},{"name":"lipomatous medulloblastoma (formerly)","type":"related"}],"termid":"MONDO:0006131","xrefs":{"Monarch":{"xref_id":"0006131"}}}


id: PBO:0040275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atos homolog A","termid":"PBO:0040275"}


id: GO:0042571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An immunoglobulin complex that is secreted into extracellular space and found in mucosal areas or other tissues or circulating in the blood or lymph. In its canonical form, a circulating immunoglobulin complex is composed of two identical heavy chains and two identical light chains, held together by disulfide bonds. Some forms of are polymers of the basic structure and contain additional components such as J-chain and the secretory component.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"immunoglobulin complex, circulating","secondary_identifiers":["Wikipedia:Antibody"],"synonyms":[{"name":"antibody","type":"exact"}],"termid":"GO:0042571"}


id: GO:0007517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work.","definition_xrefs":["ISBN:0198506732","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"is_a","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle organ development","termid":"GO:0007517"}


id: GO:0008493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of tetracycline from one side of a membrane to the other. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles).","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"tetracycline transmembrane transporter activity","synonyms":[{"name":"tetracyclin transporter activity","type":"exact"},{"name":"tetracycline transporter activity","type":"related"}],"termid":"GO:0008493"}


id: PBO:0003272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1-5,6,7,8-tetrahydrofolate (THF) synthase","termid":"PBO:0003272"}


id: PBO:0041659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 4","termid":"PBO:0041659"}


id: PBO:0039084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agouti related neuropeptide","termid":"PBO:0039084"}


id: PBO:0077535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 248","termid":"PBO:0077535"}


id: MONDO:0700177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mammary carcinoma occurring in a cat.","definition_xrefs":["NCIT:C132274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary neoplasms, animal","termid":"MONDO:0025483"},{"relation_name":"is_a","term_name":"carcinoma, non-human animal","termid":"MONDO:0700101"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"},{"relation_name":"is_a","term_name":"mammary gland disorder, non-human animal","termid":"MONDO:1011303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline mammary carcinoma","termid":"MONDO:0700177","xrefs":{"Monarch":{"xref_id":"0700177"}}}


id: PBO:0081353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 175","termid":"PBO:0081353"}


id: PBO:0046494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum-golgi intermediate compartment 1","termid":"PBO:0046494"}


id: GO:0044040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, that involve more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism carbohydrate metabolic process (obsolete GO:0044040)","synonyms":[{"name":"main pathways of carbohydrate metabolic process","type":"narrow"},{"name":"main pathways of carbohydrate metabolism","type":"narrow"},{"name":"multi-organism carbohydrate metabolism","type":"exact"}],"termid":"GO:0044040"}


id: FYPO:0005353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the RTS1 barrier is normal (i.e. indistinguishable from wild type). Note that the RTS1 barrier usually occurs in the mating type locus, but might be assayed at ectopic loci to maximise the distance that a restarted fork travels.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal replication fork arrest","termid":"FYPO:0008191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal replication fork arrest at RTS1 barrier","synonyms":[{"name":"normal replication fork arrest at mating-type locus","type":"related"},{"name":"normal replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"normal replication fork arrest at mating-type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0005353"}


id: GO:0140562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyses the reaction: UDP-alpha-D-xylose + [protein with EGF-like domain]-L-serine = UDP + [protein with EGF-like domain]-3-O-(beta-D-xylosyl)-L-serine.","definition_xrefs":["RHEA:62016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"EGF-domain serine xylosyltransferase activity","secondary_identifiers":["EC:2.4.2.63"],"termid":"GO:0140562"}


id: PBO:0040340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 3","termid":"PBO:0040340"}


id: GO:0140090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Preferential binding of proteins on curved membranes. The binding to curved membranes by insertion (aka wedging) to curved membranes is mediated by both the hydrophobic and hydrophilic faces of the helix of membrane curvature sensing (MCS) proteins.","definition_xrefs":["PMID:25898166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140299"],"is_obsolete":false,"name":"membrane curvature sensor activity","termid":"GO:0140090"}


id: GO:0106386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3R-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH.","definition_xrefs":["PMID:19571038","PMID:25203508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(3R)-hydroxyacyl-CoA dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:32711","EC:1.1.1.n12"],"synonyms":[{"name":"(3R)-hydroxyacyl-CoA dehydrogenase (NAD) activity","type":"exact"}],"termid":"GO:0106386"}


id: GO:0061817
data:
  {"annotated_genes":["SJAG_04413","SJAG_04417","SJAG_01437","SJAG_03247","SJAG_03170","SJAG_01564","SJAG_00053","SJAG_01168","SJAG_02626"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60565,61472,62331,72235,90750,91823,97784,111972,118462],"is_not":false,"summary":null,"term":"GO:0061817"}]},"cv_name":"biological_process","definition":"The attachment of an endoplasmic reticulum membrane to the plasma membrane via molecular tethers.","definition_xrefs":["GOC:dph","PMID:23237950","PMID:26877082","GOC:vw","PMID:27875684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum localization","termid":"GO:0051643"},{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01168":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_02626":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_04413":null,"SJAG_04417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0051179","GO:0140056","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum-plasma membrane tethering","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER-plasma membrane tethering","type":"exact"}],"termid":"GO:0061817","terms_by_termid":{"GO:0061817":null}}


id: MONDO:0004632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An obsolete term referring to Hodgkin lymphoma.","definition_xrefs":["NCIT:C6914"],"gene_count":0,"genotype_count":0,"name":"obsolete Hodgkin's granuloma (obsolete MONDO:0004632)","secondary_identifiers":["ICD9:201.0","ICD9:201.1","ICD9:201.9","ICD9:201.7","DOID:8651","SCTID:118602004","ICD9:201.4","NCIT:C6913","NCIT:C3517","SCTID:118607005","SCTID:118609008","ICDO:9661/3","ICD9:201.6","ICD9:201","ICD9:201.2","NCIT:C26956","SCTID:118610003"],"synonyms":[{"name":"Hodgkin granuloma","type":"exact"},{"name":"Hodgkin's granuloma","type":"exact"},{"name":"Hodgkin's granuloma of unspecified site","type":"exact"},{"name":"Hodgkin's granuloma, unspecified site, extranodal and solid organ sites","type":"exact"}],"termid":"MONDO:0004632","xrefs":{"Monarch":{"xref_id":"0004632"}}}


id: PBO:0056920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MINDY family member 4B","termid":"PBO:0056920"}


id: GO:0030713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of ovarian follicle cells to create the interfollicular stalks that connect the egg chambers of progressive developmental stages. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["PMID:10822261","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"follicle cell of egg chamber development","termid":"GO:0030707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicle cell of egg chamber stalk formation","termid":"GO:0030713"}


id: GO:0010167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrate stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitrate","termid":"GO:0010167"}


id: MONDO:0100376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(9;11)(p21.3;q23.3). (A cytogenetic abnormality that refers to the translocation of the short arm (p21.3) of chromosome 9 and the long arm (q23.3) of chromosome 11. It is associated with the development of acute myeloid leukemia with the MLLT3-MLL fusion gene transcript.)","definition_xrefs":["NCIT:C36370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, t(9;11)(p21.3;q23.3)","synonyms":[{"name":"AML, t(9;11)(p21.3;q23.3)","type":"exact"},{"name":"AML, t(9;11)(p22;q23)","type":"exact"}],"termid":"MONDO:0100376","xrefs":{"Monarch":{"xref_id":"0100376"}}}


id: GO:0048816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ocellus are generated and organized. The ocellus is a simple visual organ of insects.","direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"sensory organ morphogenesis","termid":"GO:0090596"},{"relation_name":"part_of","term_name":"eye-antennal disc morphogenesis","termid":"GO:0007455"},{"relation_name":"part_of","term_name":"ocellus development","termid":"GO:0008056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus morphogenesis","termid":"GO:0048816"}


id: PR:O94235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RAF proto-oncogene serine/threonine-protein kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase mph1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.01","secondary_identifiers":["UniProtKB:O94235"],"synonyms":[{"name":"Spom972h-RAF1","type":"exact"}],"termid":"PR:O94235"}


id: MONDO:0032636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 33","secondary_identifiers":["GARD:16332","MEDGEN:1648420","UMLS:C4748840","DOID:0112097","OMIM:618253"],"synonyms":[{"name":"MC1DN33","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 33","type":"related"}],"termid":"MONDO:0032636","xrefs":{"Monarch":{"xref_id":"0032636"}}}


id: GO:0047495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glycerophospho group from one membrane-derived oligosaccharide to another.","definition_xrefs":["EC:2.7.8.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016780","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"membrane-oligosaccharide glycerophosphotransferase activity","secondary_identifiers":["MetaCyc:PGLYCEROLTRANSII-RXN"],"synonyms":[{"name":"membrane-derived-oligosaccharide-6-(glycerophospho)-D-glucose:membrane-derived-oligosaccharide-D-glucose glycerophosphotransferase activity","type":"related"},{"name":"periplasmic phosphoglycerotransferase activity","type":"narrow"},{"name":"phosphoglycerol cyclase activity","type":"related"}],"termid":"GO:0047495"}


id: PBO:0051437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-21","termid":"PBO:0051437"}


id: PBO:0042347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD82 antisense RNA 1","termid":"PBO:0042347"}


id: GO:0090510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell division process where the division plane is perpendicular to the surface of the organ. It adds cells to the existing cell layer or cell file.","definition_xrefs":["PMID:21391814","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anticlinal cell division","termid":"GO:0090510"}


id: GO:0005927
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-substrate junction found at the terminal anchorage site of skeletal muscle cells to tendons.","definition_xrefs":["GOC:mtg_muscle","PMID:12842007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction","termid":"GO:0030055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"muscle tendon junction","synonyms":[{"name":"myotendinous junction","type":"exact"}],"termid":"GO:0005927"}


id: PBO:0005140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp3 (predicted)","termid":"PBO:0005140"}


id: GO:0045704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salivary gland determination.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"salivary gland boundary specification","termid":"GO:0007432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of salivary gland boundary specification","synonyms":[{"name":"regulation of salivary gland determination","type":"exact"}],"termid":"GO:0045704"}


id: PBO:0059508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded conserved sequence block I","termid":"PBO:0059508"}


id: PBO:0051472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)-53 (pseudogene)","termid":"PBO:0051472"}


id: PBO:0039894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GDP dissociation inhibitor gamma","termid":"PBO:0039894"}


id: PBO:0027727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_CDRE_promoter_in_response_to_micafungin","termid":"PBO:0027727"}


id: MOD:00269
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(sn-1-glycerophosphoryl)-L-serine.","definition_xrefs":["RESID:AA0264","PubMed:8645220","Unimod:419#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(sn-1-glycerophosphoryl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[(2Xi)-2,3-dihydroxypropyl]phosphonoxypropanoic acid","type":"exact"},{"name":"Glycerophospho","type":"related"},{"name":"MOD_RES O-(sn-1-glycerophosphoryl)serine","type":"exact"},{"name":"O-(sn-1-glycerophosphoryl)-L-serine","type":"exact"},{"name":"O3-(sn-1-glycerophosphoryl)-L-serine","type":"exact"},{"name":"O3-2,3-dihydroxypropyl hydrogen phosphate-L-serine ester","type":"exact"},{"name":"O3-L-serine glyceryl-1-phosphodiester","type":"exact"},{"name":"alpha-glycerophosphoryl serine","type":"exact"},{"name":"glycerophospho","type":"related"},{"name":"glycerophosphoserine","type":"exact"}],"termid":"MOD:00269"}


id: PBO:0088489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal export complex protein Arx1, peptidase family","termid":"PBO:0088489"}


id: PBO:0090167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor Eaf1","termid":"PBO:0090167"}


id: MONDO:0008011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antigen defined by monoclonal antibody T87","secondary_identifiers":["OMIM:158040","UMLS:C1834756","MEDGEN:331821"],"synonyms":[{"name":"Msk2","type":"related"},{"name":"antigen defined by monoclonal antibody T87","type":"exact"}],"termid":"MONDO:0008011","xrefs":{"Monarch":{"xref_id":"0008011"}}}


id: PBO:0048291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin receptor 3","termid":"PBO:0048291"}


id: GO:0003102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by angiotensin that increases the rate of diuresis.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_cardio"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of diuresis by angiotensin (obsolete GO:0003102)","synonyms":[{"name":"angiotensin-mediated positive regulation of diuresis","type":"exact"},{"name":"positive regulation of diuresis by angiotensin","type":"exact"}],"termid":"GO:0003102"}


id: GO:0106361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-beta-L-rhamnose + L-arginyl-[protein] = dTDP + H+ + N(omega)-(L-rhamnosyl)-L-arginyl-[protein].","definition_xrefs":["RHEA:66692","PMID:25686373","GOC:sp","PMID:26060278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"protein-arginine rhamnosyltransferase activity","termid":"GO:0106361"}


id: PBO:0043060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chordin like 1","termid":"PBO:0043060"}


id: PBO:0046396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythrocyte membrane protein band 4.1 like 2","termid":"PBO:0046396"}


id: PBO:0075435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member D","termid":"PBO:0075435"}


id: PBO:0063152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-apoptotic WT1 regulator","termid":"PBO:0063152"}


id: PBO:0072999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel beta subunit 1","termid":"PBO:0072999"}


id: GO:0100033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates fungal-type cell wall biogenesis.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of fungal-type cell wall biogenesis by transcription from RNA polymerase II promoter (obsolete GO:0100033)","termid":"GO:0100033"}


id: GO:2000700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle cell myoblast differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myoblast differentiation","termid":"GO:0045663"},{"relation_name":"is_a","term_name":"positive regulation of cardioblast differentiation","termid":"GO:0051891"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell myoblast differentiation","termid":"GO:2000690"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell myoblast differentiation","termid":"GO:0060379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell myoblast differentiation","synonyms":[{"name":"positive regulation of cardiac myoblast differentiation","type":"related"},{"name":"positive regulation of myocardial precursor cell differentiation","type":"exact"}],"termid":"GO:2000700"}


id: GO:0071462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of water.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to water","termid":"GO:0009415"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"},{"relation_name":"is_a","term_name":"cellular response to acid chemical","termid":"GO:0071229"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to water stimulus","termid":"GO:0071462"}


id: MONDO:0012992
data:
  {"annotated_genes":["SJAG_01077"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85803],"is_not":false,"summary":null,"term":"MONDO:0012992"}]},"cv_name":"mondo","definition":"This syndrome is characterized by exocrine pancreatic insufficiency, dyserythropoietic anemia, and calvarial hyperostosis.","definition_xrefs":["Orphanet:199337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocrine pancreatic insufficiency","termid":"MONDO:0001684"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia","termid":"MONDO:0019403"},{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002280","MONDO:0005066","MONDO:0005570","MONDO:0004069"],"is_obsolete":false,"name":"pancreatic insufficiency-anemia-hyperostosis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2675184","MESH:C567195","GARD:17095","MEDGEN:436369","OMIM:612714","SCTID:722207000"],"synonyms":[{"name":"exocrine pancreatic insufficiency, dyserythropoietic anemia, and calvarial hyperostosis","type":"related"},{"name":"pancreatic insufficiency, dyserythropoietic anemia, calvarial hyperostosis syndrome","type":"exact"}],"termid":"MONDO:0012992","terms_by_termid":{"MONDO:0012992":null},"xrefs":{"Monarch":{"xref_id":"0012992"}}}


id: GO:0001165
data:
  {"annotated_genes":["SJAG_02747"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79527],"is_not":false,"summary":null,"term":"GO:0001165"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase I. RNA polymerase I elements are referred to either enhancers or upstream control element (UCE, or alternately referred to as the upstream element).","definition_xrefs":["PMID:12865296","PMID:14969726","PMID:8057832","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulatory region sequence-specific DNA binding","termid":"GO:0001163"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674","GO:0000976"],"is_obsolete":false,"name":"RNA polymerase I cis-regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0001166"],"synonyms":[{"name":"RNA polymerase I enhancer sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase I upstream control element sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase I upstream element sequence-specific DNA binding","type":"related"}],"termid":"GO:0001165","terms_by_termid":{"GO:0001165":null}}


id: PBO:0087322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Snf2p family member with ATP-dependent chromatin remodeling activity; has a role in silencing at the mating type locus, telomeres and centromeres; enriched at centromeres and is required for correct chromatin structure around centromeres, as well as at the boundary element of the silent HMR; recruited to DNA double-strand breaks (DSBs) where it promotes 5' strand resection of DSBs; potential Cdc28p substrate","termid":"PBO:0087322"}


id: GO:0003813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Arg-Ser bond in complement component C3 alpha-chain to form C3a and C3b, and Arg bond in complement component C5 alpha-chain to form C5a and C5b.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete classical-complement-pathway C3/C5 convertase activity (obsolete GO:0003813)","synonyms":[{"name":"C3 convertase activity","type":"broad"},{"name":"C42","type":"related"},{"name":"C423","type":"related"},{"name":"C4b,2a","type":"related"},{"name":"C4b,2a,3b","type":"related"},{"name":"C5 convertase activity","type":"broad"},{"name":"classical-complement-pathway C3/C5 convertase activity","type":"exact"},{"name":"complement C2 activity","type":"broad"},{"name":"complement C3 convertase activity","type":"related"},{"name":"complement C42","type":"related"}],"termid":"GO:0003813"}


id: GO:0099592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which endocytosed synaptic vesicles fuse to the presynaptic endosome followed by sorting of synaptic vesicle components and budding of new synaptic vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport in synapse","termid":"GO:0099003"},{"relation_name":"is_a","term_name":"synaptic vesicle endosomal processing","termid":"GO:0099532"},{"relation_name":"part_of","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"endocytosed synaptic vesicle processing via endosome","synonyms":[{"name":"synaptic vesicle processing via endosome involved in synaptic vesicle recycling","type":"exact"}],"termid":"GO:0099592"}


id: GO:0015377
data:
  {"annotated_genes":["SJAG_03401"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in).","definition_xrefs":["PMID:31747317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"},{"relation_name":"is_a","term_name":"monoatomic anion:monoatomic cation symporter activity","termid":"GO:0015296"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"chloride:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["TC:2.A.30"],"synonyms":[{"name":"cation:chloride cotransporter activity","type":"broad"},{"name":"cation:chloride symporter activity","type":"broad"}],"termid":"GO:0015377","terms_by_termid":{"GO:0015379":null}}


id: PBO:0088083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein that interacts with Cdc48p; ubiquitin regulatory X is also known as UBX","termid":"PBO:0088083"}


id: GO:0051396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the activity of the nerve growth factor (NGF) receptor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of nerve growth factor receptor activity (obsolete GO:0051396)","synonyms":[{"name":"activation of nerve growth factor receptor activity","type":"narrow"},{"name":"positive regulation of NGF receptor activity","type":"exact"},{"name":"stimulation of nerve growth factor receptor activity","type":"narrow"},{"name":"up regulation of nerve growth factor receptor activity","type":"exact"},{"name":"up-regulation of nerve growth factor receptor activity","type":"exact"},{"name":"upregulation of nerve growth factor receptor activity","type":"exact"}],"termid":"GO:0051396"}


id: MONDO:0016026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infantile epilepsy syndrome characterized by early-onset progressive encephalopathy with migrant, continuous myoclonus. Three cases have been reported. The focal continuous myoclonus appeared during the first months of life. Prolonged bilateral myoclonic seizures and generalized tonic-clonic seizures occurred later. Subsequently, a progressive encephalopathy with hypotonia and ataxia appeared. Cortical atrophy was revealed by computed tomography (CT) scan and magnetic resonance imaging (MRI). The etiology is unknown.","definition_xrefs":["Orphanet:1943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"infant epilepsy with migrant focal crisis","secondary_identifiers":["GARD:2995","MEDGEN:1390817","SCTID:724274009","UMLS:C4510564"],"termid":"MONDO:0016026","xrefs":{"Monarch":{"xref_id":"0016026"}}}


id: MONDO:0014547
data:
  {"annotated_genes":["SJAG_04856"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85770],"is_not":false,"summary":null,"term":"MONDO:0014547"}]},"cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the NARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 24","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:444458","GARD:17765","OMIM:616239","MEDGEN:864080","DOID:0111485","UMLS:C4015643"],"synonyms":[{"name":"COXPD24","type":"exact"},{"name":"NARS2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 24","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in NARS2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 24","type":"exact"}],"termid":"MONDO:0014547","terms_by_termid":{"MONDO:0014547":null},"xrefs":{"Monarch":{"xref_id":"0014547"}}}


id: GO:0032801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"receptor metabolic process","termid":"GO:0043112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor catabolic process","synonyms":[{"name":"receptor breakdown","type":"exact"},{"name":"receptor catabolism","type":"exact"},{"name":"receptor degradation","type":"exact"}],"termid":"GO:0032801"}


id: PBO:0071649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 13","termid":"PBO:0071649"}


id: PBO:0069665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 942, pseudogene","termid":"PBO:0069665"}


id: PBO:0085129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein involved in pre-25S rRNA processing; also involved in biogenesis of large 60S ribosomal subunit; contains an RNA recognition motif (RRM); binds to Ebp2; similar to Nop13p and Nsr1p","termid":"PBO:0085129"}


id: PBO:0034059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_start_sequence_of","termid":"PBO:0034059"}


id: GO:0170033
data:
  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id: PBO:0066564
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 3","termid":"PBO:0066564"}


id: MONDO:0012698
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Waardenburg syndrome type 2 in which the cause of the disease is a mutation in the SOX10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome type 2","termid":"MONDO:0019517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 2E","secondary_identifiers":["UMLS:C2700405","DOID:0110956","GARD:15521","OMIM:611584","MEDGEN:398476"],"synonyms":[{"name":"SOX10 Waardenburg syndrome type 2","type":"exact"},{"name":"WS2E","type":"exact"},{"name":"WS2E with or without neurological involvement","type":"exact"},{"name":"Waardenburg syndrome type 2 caused by mutation in SOX10","type":"exact"},{"name":"Waardenburg syndrome type 2E with or without neurologic involvement","type":"exact"},{"name":"Waardenburg syndrome type IIE","type":"exact"},{"name":"Waardenburg syndrome, type 2E","type":"related"},{"name":"Waardenburg syndrome, type 2E, with or without neurologic involvement","type":"related"},{"name":"Ws2E, with or without neurologic involvement","type":"related"},{"name":"hypogonadotropic hypogonadism with anosmia and deafness with or without hypopigmentation","type":"exact"},{"name":"hypogonadotropic hypogonadism with anosmia and deafness, with or without hypopigmentation","type":"related"}],"termid":"MONDO:0012698","xrefs":{"Monarch":{"xref_id":"0012698"}}}


id: GO:0061398
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to an copper ion stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to copper ion (obsolete GO:0061398)","termid":"GO:0061398"}


id: PBO:0045627
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 39 (pseudogene)","termid":"PBO:0045627"}


id: PBO:0062257
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 13","termid":"PBO:0062257"}


id: PBO:0002639
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  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.3.4","termid":"PBO:0002639"}


id: PBO:0042114
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 186","termid":"PBO:0042114"}


id: PBO:0031891
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain protein Grp1 (predicted)","termid":"PBO:0031891"}


id: FYPO:0005969
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of magnesium chloride than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002682","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to magnesium chloride","synonyms":[{"name":"resistance to MgCl2","type":"exact"},{"name":"resistance to magnesium chloride during mitotic cell cycle","type":"related"},{"name":"resistance to magnesium chloride during vegetative growth","type":"exact"},{"name":"resistance to magnesium dichloride","type":"exact"},{"name":"resistant to magnesium chloride","type":"exact"}],"termid":"FYPO:0005969"}


id: PATO:0001344
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A S. cerevisiae mating type cells that secrete a pheromone that stimulates a haploids.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Saccharomyces cerevisiae mating type","termid":"PATO:0001342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha mating type (yeast)","synonyms":[{"name":"alpha","type":"broad"}],"termid":"PATO:0001344"}


id: GO:0075271
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a fruiting body called zygosporangium is formed. A zygosporangium is a thick-walled structure in which spores are produced, and is characteristic of the Zygomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zygosporangium development","termid":"GO:0075271"}


id: PBO:0048546
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor, augmenter of liver regeneration","termid":"PBO:0048546"}


id: GO:0005460
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  {"annotated_genes":["SJAG_04162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76345],"is_not":false,"summary":null,"term":"GO:0005460"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a UDP-glucose from one side of a membrane to the other. UDP-glucose is a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"UDP-glucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005460","terms_by_termid":{"GO:0005460":null}}


id: MONDO:0010360
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"young-onset Parkinson disease","termid":"MONDO:0017279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkinson disease 12","secondary_identifiers":["GARD:18604","MESH:C564486","UMLS:C1845165","MEDGEN:337173","OMIM:300557"],"synonyms":[{"name":"PARK12","type":"exact"},{"name":"Parkinson disease 12","type":"related"},{"name":"Parkinson disease, X-linked","type":"related"}],"termid":"MONDO:0010360","xrefs":{"Monarch":{"xref_id":"0010360"}}}


id: MONDO:0000078
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common presentation of craniosynostosis and polysyndactyly.","definition_xrefs":["Wikipedia:Acrocephalosyndactylia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrocephalosyndactyly","termid":"MONDO:0019796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrocephalopolysyndactyly","secondary_identifiers":["MEDGEN:673840","SCTID:205260006","UMLS:C0687154"],"synonyms":[{"name":"ACPS","type":"exact"}],"termid":"MONDO:0000078","xrefs":{"Monarch":{"xref_id":"0000078"}}}


id: PBO:0011500
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF953 thioredoxin family protein","termid":"PBO:0011500"}


id: GO:1901282
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fructoselysine.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosamine biosynthetic process","termid":"GO:0030391"},{"relation_name":"is_a","term_name":"fructoselysine metabolic process","termid":"GO:0030393"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fructoselysine biosynthetic process","synonyms":[{"name":"fructosyllysine anabolism","type":"exact"},{"name":"fructosyllysine biosynthesis","type":"exact"},{"name":"fructosyllysine biosynthetic process","type":"exact"},{"name":"fructosyllysine formation","type":"exact"},{"name":"fructosyllysine synthesis","type":"exact"}],"termid":"GO:1901282"}


id: MONDO:0012480
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any transient neonatal diabetes mellitus in which the cause of the disease is a mutation in the ABCC8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transient neonatal diabetes mellitus","termid":"MONDO:0020525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005015","MONDO:0004335"],"is_obsolete":false,"name":"diabetes mellitus, transient neonatal, 2","secondary_identifiers":["MEDGEN:372150","MESH:C563672","GARD:15482","OMIM:610374","SCTID:609580007","UMLS:C1835887"],"synonyms":[{"name":"ABCC8 transient neonatal diabetes mellitus (disease)","type":"exact"},{"name":"Tndm2","type":"related"},{"name":"diabetes mellitus, transient neonatal 2","type":"exact"},{"name":"diabetes mellitus, transient neonatal, 2","type":"exact"},{"name":"diabetes mellitus, transient neonatal, type 2","type":"exact"},{"name":"transient neonatal diabetes mellitus (disease) caused by mutation in ABCC8","type":"exact"}],"termid":"MONDO:0012480","xrefs":{"Monarch":{"xref_id":"0012480"}}}


id: GO:0021866
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The mitotic cell division of a radial glial cell giving rise to a radial glial cell and another cell type.","definition_xrefs":["GOC:dph","GOC:cls","PMID:16226447","GO_REF:0000021","GOC:dgh","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete asymmetric radial glial cell division in forebrain (obsolete GO:0021866)","termid":"GO:0021866"}


id: GO:0051499
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id: MONDO:0007751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypercholesterolemia","termid":"MONDO:0005439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"hypercholesterolemia, autosomal dominant, type B","secondary_identifiers":["OMIM:144010","GARD:8588","UMLS:C1704417","MEDGEN:309962","SCTID:238081000"],"synonyms":[{"name":"apolipoprotein B-100, familial defective","type":"related"},{"name":"apolipoprotein B-100, familial ligand-defective","type":"related"},{"name":"hypercholesterolemia, autosomal dominant, type B","type":"exact"},{"name":"hypercholesterolemia, familial, 2","type":"exact"},{"name":"hypercholesterolemia, familial, due to ligand-defective apolipoprotein B","type":"related"}],"termid":"MONDO:0007751","xrefs":{"Monarch":{"xref_id":"0007751"}}}


id: PBO:0043344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor polyribonucleotide kinase subunit 1","termid":"PBO:0043344"}


id: MONDO:1012748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any polyneuropathy that occurs in dogs due to a mutation in the ARHGEF10 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"polyneuropathy, dog","termid":"MONDO:1012354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy, ARHGEF10-related, dog","secondary_identifiers":["OMIA:001917-9615"],"synonyms":[{"name":"ILPN","type":"exact"},{"name":"LPN2","type":"exact"},{"name":"polyneuropathy, dog","type":"related"}],"termid":"MONDO:1012748","xrefs":{"Monarch":{"xref_id":"1012748"}}}


id: FYPO:0003411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere inner repeat regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin silencing at centromere","termid":"FYPO:0002834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere inner repeat","synonyms":[{"name":"decreased chromatin silencing at centromere imr","type":"exact"},{"name":"decreased chromatin silencing at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased chromatin silencing at centromeric inner repeat region","type":"exact"},{"name":"decreased heterochromatin silencing at centromere inner repeat","type":"exact"},{"name":"reduced chromatin silencing at centromere inner repeat","type":"exact"}],"termid":"FYPO:0003411"}


id: PBO:0054650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2055","termid":"PBO:0054650"}


id: GO:0051881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"}


id: PBO:0017474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-during_which_ends","termid":"PBO:0017474"}


id: GO:0150065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of deacetylase activity.","definition_xrefs":["GOC:bc","PMID:19457097","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of deacetylase activity","termid":"GO:0150065"}


id: GO:0019727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-mevalonate + NAD+ = H+ + mevaldate + NADH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mevaldate reductase (NADH) activity (obsolete GO:0019727)","termid":"GO:0019727"}


id: GO:0072322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins from the plasma membrane across the periplasmic space to the outer membrane or cell wall.","definition_xrefs":["PMID:20378773","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein transport across periplasmic space","secondary_identifiers":["GO:0072323"],"synonyms":[{"name":"chaperone-mediated protein transport across periplasmic space","type":"narrow"}],"termid":"GO:0072322"}


id: PBO:0083265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 69% of ORF overlaps the uncharacterized ORF YKL075C","termid":"PBO:0083265"}


id: PBO:0077257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMED7-TICAM2 readthrough","termid":"PBO:0077257"}


id: PBO:0116477
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmission distorting killer","termid":"PBO:0116477"}


id: PBO:0049536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z histone pseudogene 7","termid":"PBO:0049536"}


id: MONDO:0016373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facial nerve disorder","termid":"MONDO:0002098"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated facial myokymia","secondary_identifiers":["Orphanet:221106","ICD10CM:G51.4","UMLS:C0270871","MEDGEN:78741"],"termid":"MONDO:0016373","xrefs":{"Monarch":{"xref_id":"0016373"}}}


id: GO:1900498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of butyryl-CoA catabolic process to butanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA catabolic process to butanol","termid":"GO:1900497"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"butyryl-CoA catabolic process to butanol","termid":"GO:0044582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0006629","GO:0055086"],"is_obsolete":false,"name":"negative regulation of butyryl-CoA catabolic process to butanol","synonyms":[{"name":"down regulation of butyryl-CoA catabolic process to butanol","type":"exact"},{"name":"down regulation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"down-regulation of butyryl-CoA catabolic process to butanol","type":"exact"},{"name":"down-regulation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"downregulation of butyryl-CoA catabolic process to butanol","type":"exact"},{"name":"downregulation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"inhibition of butyryl-CoA catabolic process to butanol","type":"narrow"},{"name":"inhibition of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"negative regulation of butyryl-CoA catabolism to butanol","type":"exact"}],"termid":"GO:1900498"}


id: MONDO:0036779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the structures of the axilla. Representative examples include axillary lipoma, axillary lymph node lymphoma, and metastatic carcinoma to the axillary lymph nodes.","definition_xrefs":["NCIT:C35749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axillary neoplasm","secondary_identifiers":["SCTID:126639006","UMLS:C1290308","MEDGEN:266214"],"synonyms":[{"name":"axilla neoplasm","type":"exact"},{"name":"axilla tumor","type":"exact"},{"name":"axilla tumour","type":"exact"},{"name":"axillary neoplasm","type":"exact"},{"name":"neoplasm of axilla","type":"exact"},{"name":"tumor of axilla","type":"exact"},{"name":"tumour of axilla","type":"exact"}],"termid":"MONDO:0036779","xrefs":{"Monarch":{"xref_id":"0036779"}}}


id: PBO:0046516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum lectin 1 pseudogene 1","termid":"PBO:0046516"}


id: FYPO:0003998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA primase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal DNA primase activity","termid":"FYPO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000002","FYPO:0000707","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"increased DNA primase activity","termid":"FYPO:0003998"}


id: MONDO:0012430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dysequilibrium syndrome in which the cause of the disease is a mutation in the WDR81 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, intellectual disability, and dysequilibrium","termid":"MONDO:0009133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome 2","secondary_identifiers":["OMIM:610185","GARD:15473","UMLS:C2750234","MEDGEN:412914","MESH:C567656","DOID:0070557"],"synonyms":[{"name":"CAMRQ2","type":"related"},{"name":"WDR81 dysequilibrium syndrome","type":"exact"},{"name":"cerebellar ataxia and intellectual disability with or without quadrupedal locomotion 2","type":"related"},{"name":"cerebellar ataxia and mental retardation with or without quadrupedal locomotion 2","type":"related"},{"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome 2","type":"exact"},{"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome type 2","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium syndrome 2","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium syndrome type 2","type":"exact"},{"name":"dysequilibrium syndrome caused by mutation in WDR81","type":"exact"}],"termid":"MONDO:0012430","xrefs":{"Monarch":{"xref_id":"0012430"}}}


id: MONDO:0005956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A plague in which the bacteria have entered the bloodstream.","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"},{"relation_name":"is_a","term_name":"plague","termid":"MONDO:0019095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"septicemic plague","secondary_identifiers":["SCTID:9012003","ICD10CM:A20.7","MEDGEN:56296","DOID:3481","ICD9:020.2","UMLS:C0152936"],"termid":"MONDO:0005956","xrefs":{"Monarch":{"xref_id":"0005956"}}}


id: GO:0009236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cobalamin metabolic process","termid":"GO:0009235"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150","GO:0033013"],"is_obsolete":false,"name":"cobalamin biosynthetic process","synonyms":[{"name":"cobalamin anabolism","type":"exact"},{"name":"cobalamin biosynthesis","type":"exact"},{"name":"cobalamin formation","type":"exact"},{"name":"cobalamin synthesis","type":"exact"},{"name":"vitamin B12 biosynthesis","type":"exact"},{"name":"vitamin B12 biosynthetic process","type":"exact"}],"termid":"GO:0009236"}


id: PR:Q9UUG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tup12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUG8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor tup12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.14c","synonyms":[{"name":"Spom972h-tup12","type":"exact"}],"termid":"PR:Q9UUG8"}


id: GO:1904364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcitonin secretion.","definition_xrefs":["GO_REF:0000058","PMID:11278900","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"is_a","term_name":"regulation of calcitonin secretion","termid":"GO:1904362"},{"relation_name":"positively_regulates","term_name":"calcitonin secretion","termid":"GO:0036161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of calcitonin secretion","synonyms":[{"name":"activation of calcitonin secretion","type":"narrow"},{"name":"up regulation of calcitonin secretion","type":"exact"},{"name":"up-regulation of calcitonin secretion","type":"exact"},{"name":"upregulation of calcitonin secretion","type":"exact"}],"termid":"GO:1904364"}


id: PBO:0078499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 2-2","termid":"PBO:0078499"}


id: PBO:0000508
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.-","termid":"PBO:0000508"}


id: PBO:0054013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1343","termid":"PBO:0054013"}


id: PBO:0026989
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_membrane_potential","termid":"PBO:0026989"}


id: _global:causal_agent_in_process
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship between a material entity and a process where the material entity has some causal role that influences the process","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_material_entity_and_a_process","termid":"_global:causal_relation_between_material_entity_and_a_process"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_agent_in_process","secondary_identifiers":["RO:0002500"],"termid":"_global:causal_agent_in_process"}


id: PBO:0091988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf24 (frameshifted)","termid":"PBO:0091988"}


id: PBO:0087163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C17; physically interacts with C31, C11, and TFIIIB70; may be involved in the recruitment of pol III by the preinitiation complex; protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087163"}


id: PBO:0047210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 221 member A","termid":"PBO:0047210"}


id: FYPO:0001182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an alpha-glucosidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal alpha-glucosidase activity","termid":"FYPO:0001182"}


id: GO:1900942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of (Z)-nonadeca-1,14-diene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"negative regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900939"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900941"},{"relation_name":"negatively_regulates","term_name":"(Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of (Z)-nonadeca-1,14-diene biosynthetic process","synonyms":[{"name":"down regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"down regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"down regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"down regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"down regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"inhibition of (Z)-nonadeca-1,14-diene anabolism","type":"narrow"},{"name":"inhibition of (Z)-nonadeca-1,14-diene biosynthesis","type":"narrow"},{"name":"inhibition of (Z)-nonadeca-1,14-diene biosynthetic process","type":"narrow"},{"name":"inhibition of (Z)-nonadeca-1,14-diene formation","type":"narrow"},{"name":"inhibition of (Z)-nonadeca-1,14-diene synthesis","type":"narrow"},{"name":"negative regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"negative regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"negative regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"negative regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"}],"termid":"GO:1900942"}


id: PBO:0083208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF FRT1","termid":"PBO:0083208"}


id: PBO:0060152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation release factor in rescue","termid":"PBO:0060152"}


id: MONDO:0018575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"}],"gene_count":0,"genotype_count":0,"name":"obsolete microcephalic primordial dwarfism-insulin resistance syndrome (obsolete MONDO:0018575)","secondary_identifiers":["Orphanet:436182"],"termid":"MONDO:0018575","xrefs":{"Monarch":{"xref_id":"0018575"}}}


id: PBO:0084165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly-conserved N-terminally anchored AAA-ATPase; distributed in the mitochondrial outer membrane and peroxisomes; involved in mitochondrial protein sorting; functions as an extraction engine in local organelle surveillance to remove and initiate degradation of mistargeted proteins, ensuring fidelity of organelle-specific localization of tail-anchored proteins; contains an N-terminal transmembrane domain and C-terminal cytoplasmic ATPase domain","termid":"PBO:0084165"}


id: MONDO:0014559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"progressive essential tremor-speech impairment-facial dysmorphism-intellectual disability-abnormal behavior syndrome","secondary_identifiers":["OMIM:616269","Orphanet:457212","GARD:17798","DOID:0081212","UMLS:C4225395","MEDGEN:895952"],"synonyms":[{"name":"MRT48","type":"related"},{"name":"intellectual disability, autosomal recessive 48","type":"related"},{"name":"intellectual disability, autosomal recessive type 48","type":"exact"},{"name":"mental retardation, autosomal recessive 48","type":"related"},{"name":"mental retardation, autosomal recessive type 48","type":"exact"}],"termid":"MONDO:0014559","xrefs":{"Monarch":{"xref_id":"0014559"}}}


id: MOD:01668
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to O4-(8alpha-FAD)-L-aspartate.","definition_xrefs":["PubMed:20080101","RESID:AA0522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4-(8alpha-FAD)-L-aspartate","synonyms":[{"name":"(2S)-2-amino-4-oxo-4-[8alpha-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]oxybutanoic acid","type":"exact"},{"name":"8alpha-[(4-aspartyl)oxy]FAD","type":"exact"},{"name":"O4-(8alpha-FAD)-L-aspartate","type":"exact"}],"termid":"MOD:01668"}


id: MONDO:0011244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Marshall-Smith syndrome is a rare genetic disease characterized by tall stature and advanced bone age at birth.","definition_xrefs":["Orphanet:561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marshall-Smith syndrome","secondary_identifiers":["SCTID:73284007","OMIM:602535","UMLS:C0265211","icd11.foundation:417951600","DOID:0050858","GARD:6985","ICD9:759.89","MEDGEN:75551","MESH:C536026"],"synonyms":[{"name":"MRSHSS","type":"related"},{"name":"Marshall-SMITH syndrome","type":"related"},{"name":"Marshall-Smith syndrome","type":"exact"},{"name":"accelerated skeletal maturation-facial dysmorphism-failure to thrive syndrome","type":"exact"}],"termid":"MONDO:0011244","xrefs":{"Monarch":{"xref_id":"0011244"}}}


id: PBO:0049721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS5 divergent transcript","termid":"PBO:0049721"}


id: MONDO:0000056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mandibuloacral dysplasia with lipodystrophy (obsolete MONDO:0000056)","termid":"MONDO:0000056","xrefs":{"Monarch":{"xref_id":"0000056"}}}


id: MONDO:0031055
data:
  {"annotated_genes":["SJAG_04909"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86090],"is_not":false,"summary":null,"term":"MONDO:0031055"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 107","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620033","DOID:0070393","MEDGEN:1823988","UMLS:C5774215"],"synonyms":[{"name":"DEE107","type":"exact"},{"name":"developmental and epileptic encephalopathy 107","type":"exact"}],"termid":"MONDO:0031055","terms_by_termid":{"MONDO:0031055":null},"xrefs":{"Monarch":{"xref_id":"0031055"}}}


id: FYPO:0003473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal chromosome segregation, producing inviable daughter cells, and in which the septum forms in a position that partitions both nuclei into one compartment, when the cell is subject to salt stress. Cell separation may or may not be completed.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoseptate vegetative cell with binucleate and anucleate compartments","termid":"FYPO:0003166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"septation following abnormal chromosome segregation, with binucleate and anucleate compartment formation during cellular response to salt stress","synonyms":[{"name":"septation following abnormal chromosome segregation, with anucleate cell formation during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"septation following abnormal chromosome segregation, with anucleate cell formation during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"septation following abnormal chromosome segregation, with binucleate cell formation during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003473"}


id: GO:0140135
data:
  {"annotated_genes":["SJAG_04668","SJAG_02877","SJAG_05342","SJAG_02532","SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104082],"is_not":false,"summary":null,"term":"GO:0140135"},{"annotations":[92748,92690,99954,114231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens in response to a mechanical stress.","definition_xrefs":["GOC:ha","PMID:22343900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"mechanosensitive monoatomic ion channel activity","termid":"GO:0008381"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02532":null,"SJAG_02877":null,"SJAG_04668":null,"SJAG_05229":null,"SJAG_05342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"mechanosensitive monoatomic cation channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9663363","Reactome:R-HSA-9855089","Reactome:R-HSA-9659380"],"synonyms":[{"name":"mechanically-gated cation channel activity","type":"exact"},{"name":"mechanosensitive cation channel activity","type":"broad"}],"termid":"GO:0140135","terms_by_termid":{"GO:0015275":null,"GO:0140135":null}}


id: PBO:0109546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex WD repeat (scaffold) subunit, striatin Csc3","termid":"PBO:0109546"}


id: PBO:0005688
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner MTOC Attachment site","termid":"PBO:0005688"}


id: PBO:0040057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 5","termid":"PBO:0040057"}


id: GO:0002210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral response resulting from wounding.","definition_xrefs":["GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to wounding","synonyms":[{"name":"behavioural response to wounding","type":"exact"}],"termid":"GO:0002210"}


id: PBO:0017524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase Fol3 (predicted)","termid":"PBO:0017524"}


id: MONDO:0700232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by variants in the KIZ gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"KIZ-related retinopathy","synonyms":[{"name":"KIZ-related retinopathy","type":"exact"}],"termid":"MONDO:0700232","xrefs":{"Monarch":{"xref_id":"0700232"}}}


id: GO:0071334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rhamnose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to rhamnose","termid":"GO:0032149"},{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to rhamnose stimulus","synonyms":[{"name":"cellular response to L-rhamnose stimulus","type":"narrow"}],"termid":"GO:0071334"}


id: PBO:0061637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 16 like 1","termid":"PBO:0061637"}


id: PBO:0041492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C12orf42 antisense RNA 1","termid":"PBO:0041492"}


id: PBO:0050157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 13","termid":"PBO:0050157"}


id: MONDO:0013182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"17p13.3 microduplication syndrome is characterized by variable psychomotor delay and dysmorphic features.","definition_xrefs":["Orphanet:217385"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 17","termid":"MONDO:0016950"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17p13.3 duplication syndrome","secondary_identifiers":["GARD:17122","OMIM:613215","UMLS:C3808300","DOID:0060432","MEDGEN:814630","MESH:C567705","SCTID:719582007"],"synonyms":[{"name":"17p13.3 duplication syndrome","type":"exact"},{"name":"17p13.3 microduplication syndrome","type":"exact"},{"name":"chromosome 17p13.3 centromeric duplication syndrome","type":"exact"},{"name":"chromosome 17p13.3, centromeric, DUPLICATION syndrome","type":"related"},{"name":"dup(17)(p13.3)","type":"exact"},{"name":"trisomy 17p13.3","type":"exact"}],"termid":"MONDO:0013182","xrefs":{"Monarch":{"xref_id":"0013182"}}}


id: MONDO:0044253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dermatoglyphics--palmar triradius d, absence of (obsolete MONDO:0044253)","secondary_identifiers":["OMIM:221760"],"synonyms":[{"name":"dermatoglyphics--palmar triradius d, absence of","type":"related"}],"termid":"MONDO:0044253","xrefs":{"Monarch":{"xref_id":"0044253"}}}


id: SO:0000705
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Two or more adjacent copies of a region (of length greater than 1).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem_repeat","secondary_identifiers":["http://www.sci.sdsu.edu/~smaloy/Glossary/T.html","http://en.wikipedia.org/wiki/Tandem_repeat"],"synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:tandem","type":"exact"},{"name":"tandem repeat","type":"exact"}],"termid":"SO:0000705"}


id: PBO:0086237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with Vps4p and has a role in vacuolar sorting; stimulates the ATPase activity of Vps4; localizes to endosomes in a Vps4-dependent manner; overexpression causes canavanine sensitivity and confers a partial class D vacuole morphology","termid":"PBO:0086237"}


id: FYPO:0000682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of a molecular function is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of molecular function","synonyms":[{"name":"abnormal regulation of molecular function during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of molecular function during vegetative growth","type":"exact"}],"termid":"FYPO:0000682"}


id: MONDO:0002909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormally high level of glucose in the blood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolism disease","termid":"MONDO:0002908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperglycemia","secondary_identifiers":["MESH:D006943","DOID:4195","ICD9:790.6","SCTID:80394007","UMLS:C0020456","MEDGEN:5689"],"termid":"MONDO:0002909","xrefs":{"Monarch":{"xref_id":"0002909"}}}


id: GO:0005891
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74815],"is_not":false,"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel complex","termid":"GO:0034704"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"voltage-gated calcium channel complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"voltage gated calcium channel complex","type":"exact"},{"name":"voltage-dependent calcium channel complex","type":"exact"},{"name":"voltage-sensitive calcium channel complex","type":"exact"}],"termid":"GO:0005891","terms_by_termid":{"GO:0005891":null}}


id: PBO:0069383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 643, pseudogene","termid":"PBO:0069383"}


id: FYPO:0004589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which localization of the gamma-tubulin complex to the spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex localization","termid":"FYPO:0001440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body","synonyms":[{"name":"abnormal gamma-tubulin complex localisation to mitotic spindle pole body","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic SPB","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to spindle pole body during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004589"}


id: PBO:0017736
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae LYS2","termid":"PBO:0017736"}


id: PBO:0110022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mitochondrial tRNA 5'-end processing protein Rrg8","termid":"PBO:0110022"}


id: PR:000050535
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf3 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been monomethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00085.","definition_xrefs":["PRO:DAN","PMID:22150589","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf3 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050528"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf3/Me1(K20)","pombase_gene_id":"SPBC1105.12","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00085","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf3 gene translation product, initiator methionine removed monomethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf3/InitMet-/Me1:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00085","type":"broad"},{"name":"hhf3/Me1(K20)","type":"exact"},{"name":"histone H4 K20me1 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf3 K20me1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050535"}


id: PBO:0039737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein F","termid":"PBO:0039737"}


id: PBO:0058370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4742","termid":"PBO:0058370"}


id: FYPO:0005443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of hydrolysis of peptide bonds within a protein is decreased. All proteolysis may be affected, or only cleavage of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"},{"relation_name":"is_a","term_name":"decreased proteolysis","termid":"FYPO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased proteolysis during vegetative growth","synonyms":[{"name":"decreased peptidolysis during vegetative growth","type":"exact"},{"name":"decreased protein cleavage during vegetative growth","type":"related"},{"name":"decreased proteolysis during mitotic cell cycle","type":"related"},{"name":"reduced proteolysis during vegetative growth","type":"exact"}],"termid":"FYPO:0005443"}


id: PBO:0074809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 14A","termid":"PBO:0074809"}


id: GO:0061142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesothelial cell to an epithelial cell and contributes to the development of the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mesothelial-mesenchymal cell signaling involved in early lung development","synonyms":[{"name":"mesothelial-mesenchymal cell signalling involved in early lung development","type":"exact"}],"termid":"GO:0061142"}


id: PBO:0057821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3141","termid":"PBO:0057821"}


id: MONDO:0023628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Levator syndrome is characterized by sporadic pain in the rectum caused by spasm of a muscle near the anus (the levator ani muscle). The muscle spasm causes pain that typically is not related to defecation. The pain usually lasts less than 20 minutes. Pain may be brief and intense or a vague ache high in the rectum. It may occur spontaneously or with sitting and can waken a person from sleep. The pain may feel as if it would be relieved by the passage of gas or a bowel movement. In severe cases, the pain can persist for many hours and can recur frequently. A person may have undergone various unsuccessful rectal operations to relieve these symptoms.","definition_xrefs":["GARD:0006899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"anus disorder","termid":"MONDO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"levator syndrome","secondary_identifiers":["SCTID:62647006","UMLS:C0423738","NCIT:C113615","MESH:C535890","MEDGEN:98071"],"synonyms":[{"name":"anorectal spasm","type":"related"},{"name":"levator ani spasm syndrome","type":"related"},{"name":"levator ani syndrome","type":"related"},{"name":"levator syndrome","type":"exact"},{"name":"painful spasm of anus","type":"exact"},{"name":"paroxysmal proctalgia","type":"related"},{"name":"proctalgia fugax","type":"related"},{"name":"psychogenic anal spasm","type":"related"}],"termid":"MONDO:0023628","xrefs":{"Monarch":{"xref_id":"0023628"}}}


id: GO:0021573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 7 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:curators","GOC:dph","GOC:cls","GOC:jid","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 7 development","termid":"GO:0021573"}


id: GO:0030600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloyl-polysaccharide + H2O = ferulate + polysaccharide.","definition_xrefs":["EC:3.1.1.73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"feruloyl esterase activity","secondary_identifiers":["MetaCyc:3.1.1.73-RXN"],"synonyms":[{"name":"4-hydroxy-3-methoxycinnamoyl-sugar hydrolase activity","type":"related"},{"name":"FAE-I","type":"related"},{"name":"FAE-II","type":"related"},{"name":"FAE-III","type":"related"},{"name":"FAEA","type":"related"},{"name":"cinnAE","type":"related"},{"name":"cinnamoyl ester hydrolase activity","type":"exact"},{"name":"ferulic acid esterase activity","type":"related"},{"name":"hemicellulase accessory","type":"related"},{"name":"hydroxycinnamoyl esterase activity","type":"related"}],"termid":"GO:0030600"}


id: MONDO:0002576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal rhabdomyosarcoma that arises from the extrahepatic bile ducts.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct rhabdomyosarcoma","termid":"MONDO:0002577"},{"relation_name":"is_a","term_name":"embryonal rhabdomyosarcoma","termid":"MONDO:0009993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"embryonal extrahepatic bile duct rhabdomyosarcoma","secondary_identifiers":["UMLS:C1333505","DOID:3253","NCIT:C5847","MEDGEN:234244"],"synonyms":[{"name":"embryonal extrahepatic bile duct rhabdomyosarcoma","type":"exact"},{"name":"embryonal rhabdomyosarcoma (disease) of extrahepatic bile duct","type":"exact"},{"name":"embryonal rhabdomyosarcoma of extrahepatic bile duct","type":"exact"},{"name":"embryonal rhabdomyosarcoma of the extrahepatic bile duct","type":"exact"},{"name":"extrahepatic bile duct embryonal rhabdomyosarcoma","type":"exact"},{"name":"extrahepatic bile duct embryonal rhabdomyosarcoma (disease)","type":"exact"}],"termid":"MONDO:0002576","xrefs":{"Monarch":{"xref_id":"0002576"}}}


id: PATO:0001796
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coiling which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"coiled","termid":"PATO:0000404"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased coiling","synonyms":[{"name":"low coiling","type":"exact"}],"termid":"PATO:0001796"}


id: PBO:0059544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Leu (UUA/G) 1","termid":"PBO:0059544"}


id: PBO:0042636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein Y-linked 11 pseudogene","termid":"PBO:0042636"}


id: GO:1901450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to butan-1-ol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to alcohol","termid":"GO:1901421"},{"relation_name":"is_a","term_name":"regulation of response to butan-1-ol","termid":"GO:1901448"},{"relation_name":"positively_regulates","term_name":"response to butan-1-ol","termid":"GO:1901422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to butan-1-ol","synonyms":[{"name":"activation of response to butan-1-ol","type":"narrow"},{"name":"up regulation of response to butan-1-ol","type":"exact"},{"name":"up-regulation of response to butan-1-ol","type":"exact"},{"name":"upregulation of response to butan-1-ol","type":"exact"}],"termid":"GO:1901450"}


id: PBO:0047235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member G","termid":"PBO:0047235"}


id: GO:0005892
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homo- or hetero-pentameric protein complex that forms a transmembrane channel through which ions may pass in response to acetylcholine binding.","definition_xrefs":["PMID:12381728","GOC:mah","PMID:15579462","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel complex","termid":"GO:0034702"},{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"acetylcholine-gated channel complex","synonyms":[{"name":"nicotinic acetylcholine receptor","type":"broad"},{"name":"nicotinic acetylcholine-gated receptor-channel complex","type":"exact"}],"termid":"GO:0005892"}


id: PBO:0061789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 1","termid":"PBO:0061789"}


id: PBO:0081020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C2HC-type containing 1B","termid":"PBO:0081020"}


id: MONDO:0019585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scleromyxedema without monoclonal gammopathy is a form of atypical lichen myxedematosus, characterized by a generalized sclerodermoid infiltration of skin studded with multiple, firm papules of 1-3 mm in diameter involving face (leonine appearance), trunk, and limbs, without monoclonal gammopathy. The involvement of the face can be missing and pruritus may be prominent.","definition_xrefs":["Orphanet:90400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atypical lichen myxedematosus","termid":"MONDO:0019447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"scleromyxedema without monoclonal gammopathy","secondary_identifiers":["MEDGEN:1843341","GARD:19144","UMLS:C5681463"],"termid":"MONDO:0019585","xrefs":{"Monarch":{"xref_id":"0019585"}}}


id: MONDO:0008527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tarsal coalition","secondary_identifiers":["OMIM:186850","ICD9:755.67","MEDGEN:539393","SCTID:27173008","UMLS:C0265654","MESH:D000070604"],"synonyms":[{"name":"tarsal coalition","type":"exact"},{"name":"tarsal fusion","type":"related"}],"termid":"MONDO:0008527","xrefs":{"Monarch":{"xref_id":"0008527"}}}


id: MONDO:0005958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sex cord-stromal tumor (obsolete MONDO:0005958)","termid":"MONDO:0005958","xrefs":{"Monarch":{"xref_id":"0005958"}}}


id: GO:0019260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,2-dichloroethane, a major commodity chemical used, for example, in the manufacture of vinyl chloride.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,2-dichloroethane metabolic process","termid":"GO:0018899"},{"relation_name":"is_a","term_name":"halogenated hydrocarbon catabolic process","termid":"GO:0042206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,2-dichloroethane catabolic process","secondary_identifiers":["MetaCyc:12DICHLORETHDEG-PWY"],"synonyms":[{"name":"1,2-dichloroethane breakdown","type":"exact"},{"name":"1,2-dichloroethane catabolism","type":"exact"},{"name":"1,2-dichloroethane degradation","type":"exact"}],"termid":"GO:0019260"}


id: PBO:0003741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp5","termid":"PBO:0003741"}


id: MONDO:0008826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis-hyperkeratosis syndrome, lethal form is an arthrogryposis syndrome, described in two siblings to date, characterized by the association of multiple congenital joint contractures (of the large joints, fingers and toes) and hyperkeratosis (i.e. thick, scaling and fissured skin), with death occurring in early infancy. There have been no further reports in the literature since 1993.","definition_xrefs":["Orphanet:1485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis-hyperkeratosis syndrome, lethal form","secondary_identifiers":["UMLS:C1859710","MEDGEN:349230","GARD:3053","MESH:C535883","SCTID:726620005","OMIM:208158"],"synonyms":[{"name":"Johnston Aarons Schelley syndrome","type":"related"},{"name":"Johnston-Aarons-Schelley syndrome","type":"exact"},{"name":"Joint contractures, hyperkeratosis, and severe hypoplasia of the posterior columns","type":"related"},{"name":"arthrogryposis with hyperkeratosis","type":"related"}],"termid":"MONDO:0008826","xrefs":{"Monarch":{"xref_id":"0008826"}}}


id: PBO:0045567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 15","termid":"PBO:0045567"}


id: PBO:0079431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma 1","termid":"PBO:0079431"}


id: GO:0043594
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer membrane around a bacterial endospore, located between the endospore cortex and endospore coat.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer membrane","termid":"GO:0019867"},{"relation_name":"part_of","term_name":"endospore external encapsulating structure","termid":"GO:0043591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"outer endospore membrane","termid":"GO:0043594"}


id: PBO:0078735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 7-1","termid":"PBO:0078735"}


id: PBO:0060167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTSS I-BAR domain containing 1","termid":"PBO:0060167"}


id: PBO:0067401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 508, pseudogene","termid":"PBO:0067401"}


id: MONDO:0017623
data:
  {"annotated_genes":["SJAG_02426","SJAG_04206","SJAG_04394"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86820,86821,86822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008318"}]},"cv_name":"mondo","definition":"A group of clinically heterogeneous disorders united by a germline PTEN mutation and the involvement of derivatives of all 3 germ cell layers, manifesting with hamartomas, overgrowth and neoplasia. Currently, subsets carrying clinical diagnoses of Cowden syndrome, Bannayan-Riley-Ruvalcaba syndrome, Proteus and Proteus-like syndromes and SOLAMEN syndrome belong to PHTS.","definition_xrefs":["Orphanet:306498"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02426":null,"SJAG_04206":null,"SJAG_04394":null},"genotype_count":0,"is_obsolete":false,"name":"PTEN hamartoma tumor syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:368366","NORD:1631","GARD:12800","UMLS:C1959582","DOID:0080191","SCTID:722859001","NCIT:C179915"],"synonyms":[{"name":"PHTS","type":"exact"},{"name":"PTEN hamartoma tumor syndrome","type":"exact"}],"termid":"MONDO:0017623","terms_by_termid":{"MONDO:0008318":null},"xrefs":{"Monarch":{"xref_id":"0017623"}}}


id: FYPO:0008097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which sister chromatids partially separate in G2 arrest after glucose starvation (i.e. stationary phase).","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"separation of sister chromatids in stationary phase","termid":"FYPO:0008097"}


id: SO:0000468
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One of the pieces of sequence that make up a golden path.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"golden_path","termid":"SO:0000688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golden_path_fragment","synonyms":[{"name":"golden path fragment","type":"exact"}],"termid":"SO:0000468"}


id: MONDO:1012069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dystrophic epidermolysis bullosa, non-human animal","termid":"MONDO:1011737"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophic epidermolysis bullosa, domestic cat","secondary_identifiers":["OMIA:000341-9685"],"termid":"MONDO:1012069","xrefs":{"Monarch":{"xref_id":"1012069"}}}


id: PBO:0051541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 6 receptor","termid":"PBO:0051541"}


id: GO:0009971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the anastral spindle in male meiotic cells.","definition_xrefs":["GOC:tb","PMID:11973272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly involved in male meiosis","termid":"GO:0007053"},{"relation_name":"is_a","term_name":"anastral spindle assembly","termid":"GO:0055048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0007010","GO:0140013","GO:0044085","GO:0000226"],"is_obsolete":false,"name":"anastral spindle assembly involved in male meiosis","termid":"GO:0009971"}


id: PBO:0024842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor GTPase Guf1 (predicted)","termid":"PBO:0024842"}


id: PBO:0018246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus-end directed microtubule motor, kinesin Pkl1","termid":"PBO:0018246"}


id: MONDO:0020774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Menke-Hennekam syndrome","secondary_identifiers":["OMIMPS:618332","Orphanet:592574","MEDGEN:1814480","UMLS:C5681632","GARD:22371"],"termid":"MONDO:0020774","xrefs":{"Monarch":{"xref_id":"0020774"}}}


id: GO:0034809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene-cis-4,5-dihydrodiol = 4,5-dihydroxybenzo(a)pyrene + H2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete benzo(a)pyrene-cis-4,5-dihydrodiol dehydrogenase activity (obsolete GO:0034809)","termid":"GO:0034809"}


id: PBO:0057232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 411","termid":"PBO:0057232"}


id: GO:0006297
data:
  {"annotated_genes":["SJAG_02908","SJAG_00814","SJAG_02527","SJAG_02818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74537,75382,77249,80445],"is_not":false,"summary":null,"term":"GO:0006297"}]},"cv_name":"biological_process","definition":"Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00814":null,"SJAG_02527":null,"SJAG_02818":null,"SJAG_02908":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"nucleotide-excision repair, DNA gap filling","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5696397"],"termid":"GO:0006297","terms_by_termid":{"GO:0006297":null}}


id: PBO:0078086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 3","termid":"PBO:0078086"}


id: RO:0002511
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of transcribed from","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_to","termid":"RO:0002511"}


id: FYPO:0002037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an endodeoxyribonuclease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endodeoxyribonuclease activity","termid":"FYPO:0002036"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0005447","FYPO:0000652"],"is_obsolete":false,"name":"decreased endodeoxyribonuclease activity","synonyms":[{"name":"reduced endodeoxyribonuclease activity","type":"exact"}],"termid":"FYPO:0002037"}


id: GO:0060213
data:
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id: PBO:0069248
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id: SO:0000839
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id: GO:0071001
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id: PBO:0051948
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id: PBO:0090751
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id: FYPO:0000046
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sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-51(Y189D cold sensitive)[Overexpression]","display_uniquename":"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Overexpression"}]}]},"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"oar2delta":{"display_name":"oar2delta","display_uniquename":"oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002058","FYPO:0001985","FYPO:0000003","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth","references_by_uniquename":{"PMID:23786411":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32243490":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null},"secondary_identifiers":["FYPO:0000222"],"single_locus_annotated_genes":["SJAG_00266","SJAG_03198","SJAG_00409","SJAG_00514","SJAG_03453","SJAG_01794","SJAG_04464","SJAG_05207","SJAG_01946","SJAG_02592","SJAG_04697","SJAG_02527","SJAG_04703"],"single_locus_genotype_uniquenames":["scd1delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","gpd1delta","sty1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","for3delta","gms1delta","cem1delta","atf1delta","oar2delta","ras1delta","scd2delta","cmp7delta"],"synonyms":[{"name":"aerobic growth defects","type":"related"},{"name":"decreased aerobic cell population growth","type":"narrow"},{"name":"decreased growth","type":"broad"},{"name":"reduced aerobic cell population growth","type":"narrow"},{"name":"reduced cell population growth","type":"exact"},{"name":"slow aerobic cell population growth","type":"narrow"}],"termid":"FYPO:0000046","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000117":null,"FYECO:0000137":null,"FYPO:0000080":null,"FYPO:0000082":null,"FYPO:0001355":null,"FYPO:0001408":null,"FYPO:0004481":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0019043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic skin disease (obsolete MONDO:0019043)","secondary_identifiers":["Orphanet:68346"],"synonyms":[{"name":"rare genodermatosis","type":"exact"}],"termid":"MONDO:0019043","xrefs":{"Monarch":{"xref_id":"0019043"}}}


id: GO:0006072
data:
  {"annotated_genes":["SJAG_00409","SJAG_01012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62938,69552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046168"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol phosphate metabolic process","termid":"GO:0052646"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycerol-3-phosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"glycerol-3-phosphate metabolism","type":"exact"}],"termid":"GO:0006072","terms_by_termid":{"GO:0046168":null}}


id: PBO:0063603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 16","termid":"PBO:0063603"}


id: PBO:0004586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sir2 family histone deacetylase Sir2","termid":"PBO:0004586"}


id: PBO:0070097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 11 pseudogene","termid":"PBO:0070097"}


id: PBO:0040271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrophin 1","termid":"PBO:0040271"}


id: PBO:0050495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B5","termid":"PBO:0050495"}


id: PBO:0069263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 519, pseudogene","termid":"PBO:0069263"}


id: PBO:0051145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-23","termid":"PBO:0051145"}


id: FYECO:0000434
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed on normal medium after a short incubation in medium containing hydroxyurea.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient hydroxyurea treatment","secondary_identifiers":["PMID:37200372"],"synonyms":[{"name":"acute hydroxyurea treatment","type":"broad"}],"termid":"FYECO:0000434"}


id: GO:1903039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte cell-cell adhesion.","definition_xrefs":["GOC:rl","PMID:21106532","GOC:TermGenie","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of leukocyte cell-cell adhesion","termid":"GO:1903037"},{"relation_name":"positively_regulates","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of leukocyte cell-cell adhesion","synonyms":[{"name":"activation of leukocyte adhesion","type":"narrow"},{"name":"activation of leukocyte cell adhesion","type":"narrow"},{"name":"activation of leukocyte cell-cell adhesion","type":"narrow"},{"name":"positive regulation of leukocyte adhesion","type":"exact"},{"name":"positive regulation of leukocyte cell adhesion","type":"exact"},{"name":"up regulation of leukocyte adhesion","type":"exact"},{"name":"up regulation of leukocyte cell adhesion","type":"exact"},{"name":"up regulation of leukocyte cell-cell adhesion","type":"exact"},{"name":"up-regulation of leukocyte adhesion","type":"exact"},{"name":"up-regulation of leukocyte cell adhesion","type":"exact"},{"name":"up-regulation of leukocyte cell-cell adhesion","type":"exact"},{"name":"upregulation of leukocyte adhesion","type":"exact"},{"name":"upregulation of leukocyte cell adhesion","type":"exact"},{"name":"upregulation of leukocyte cell-cell adhesion","type":"exact"}],"termid":"GO:1903039"}


id: PBO:0029498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_elongated_vegetative_cell_population_(obsolete_FYPO:0002217)","termid":"PBO:0029498"}


id: FYPO:0007046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which alkaline phosphatase activity is absent during a cellular response to zinc ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished alkaline phosphatase activity","termid":"FYPO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abolished alkaline phosphatase activity during cellular response to zinc ion starvation","synonyms":[{"name":"abolished alkaline phosphatase activity during cellular response to zinc ion depletion","type":"exact"},{"name":"abolished alkaline phosphatase activity during cellular response to zinc ion deprivation","type":"exact"},{"name":"abolished alkaline phosphatase activity during cellular response to zinc ion limitation","type":"exact"},{"name":"abolished alkaline phosphatase activity during cellular response to zinc starvation","type":"exact"},{"name":"alkaline phosphatase activity abolished during cellular response to zinc ion starvation","type":"exact"}],"termid":"FYPO:0007046"}


id: PBO:0039755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein","termid":"PBO:0039755"}


id: GO:0002803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antibacterial peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide production","termid":"GO:0002225"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide production","termid":"GO:0002786"},{"relation_name":"is_a","term_name":"positive regulation of defense response to bacterium","termid":"GO:1900426"},{"relation_name":"positively_regulates","term_name":"antibacterial peptide production","termid":"GO:0002778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of antibacterial peptide production","synonyms":[{"name":"activation of antibacterial peptide production","type":"narrow"},{"name":"stimulation of antibacterial peptide production","type":"narrow"},{"name":"up regulation of antibacterial peptide production","type":"exact"},{"name":"up-regulation of antibacterial peptide production","type":"exact"},{"name":"upregulation of antibacterial peptide production","type":"exact"}],"termid":"GO:0002803"}


id: GO:0034548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-cyclopropylammeline + H2O = N-cyclopropylammelide + NH3.","definition_xrefs":["UM-BBD_reactionID:r0826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"N-cyclopropylammeline deaminase activity","secondary_identifiers":["MetaCyc:RXN-8019"],"termid":"GO:0034548"}


id: GO:0008492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cAMP generating peptide activity (obsolete GO:0008492)","synonyms":[{"name":"cAMP generating peptide activity","type":"exact"},{"name":"cyclic AMP generating peptide activity","type":"exact"}],"termid":"GO:0008492"}


id: GO:0030910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"nose development","termid":"GO:0043584"},{"relation_name":"part_of","term_name":"olfactory placode morphogenesis","termid":"GO:0071699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory placode formation","termid":"GO:0030910"}


id: PBO:0072558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding C","termid":"PBO:0072558"}


id: GO:0046773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts translation termination of host mRNAs. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host translation termination","synonyms":[{"name":"suppression by virus of host translation termination","type":"narrow"},{"name":"viral inhibition of termination of host cell protein biosynthesis","type":"narrow"},{"name":"viral inhibition of termination of host cell protein biosynthetic process","type":"narrow"},{"name":"viral suppression of termination by host of host cell protein biosynthesis","type":"narrow"},{"name":"viral suppression of termination by host of host cell protein biosynthetic process","type":"narrow"}],"termid":"GO:0046773"}


id: MONDO:0019520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A lymphedema that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic lymphedema (obsolete MONDO:0019520)","secondary_identifiers":["Orphanet:89832"],"synonyms":[{"name":"syndrome associated with lymphedema","type":"exact"},{"name":"syndromic lymphedema","type":"exact"}],"termid":"MONDO:0019520","xrefs":{"Monarch":{"xref_id":"0019520"}}}


id: MONDO:0011144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition that affects the nervous system. Signs and symptoms of the condition generally develop between ages 18 months and 8 years, although later onset cases have been reported. Affected people may experience loss of muscle coordination (ataxia), seizures that do not respond to medications, muscle twitches (myoclonus), visual impairment, and developmental regression (loss of previously acquired skills). It occurs predominantly in people of Portuguese, Indian, Pakistani, or Czech ancestry. CLN6-NCL is caused by changes (mutations) in the CLN6 gene and is inherited in an autosomal recessive manner. Treatment options are limited to therapies that can help relieve some of the symptoms.","direct_ancestors":[{"relation_name":"is_a","term_name":"ceroid lipofuscinosis, neuronal, 6B (Kufs type)","termid":"MONDO:0008768"},{"relation_name":"is_a","term_name":"late infantile neuronal ceroid lipofuscinosis","termid":"MONDO:0015674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005559","MONDO:0005066","MONDO:0002561","MONDO:0002039"],"is_obsolete":false,"name":"ceroid lipofuscinosis, neuronal, 6A","secondary_identifiers":["Orphanet:228363","OMIM:601780","UMLS:C5551375","MEDGEN:1790423","DOID:0110729","GARD:1224","MESH:C566627"],"synonyms":[{"name":"CLN6","type":"exact"},{"name":"CLN6 disease","type":"related"},{"name":"CLN6 disease, adult Kufs type A (subtype)","type":"related"},{"name":"CLN6 disease, late infantile (subtype)","type":"related"},{"name":"CLN6 late infantile neuronal ceroid lipofuscinosis","type":"exact"},{"name":"CLN6A","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 6","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, 6, variable age at onset","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, type 6","type":"exact"},{"name":"late infantile neuronal ceroid lipofuscinosis caused by mutation in CLN6","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 6","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 6 variable age of onset","type":"exact"},{"name":"neuronal ceroid lipofuscinosis type 6","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, Gypsy/Indian early juvenile variant","type":"related"},{"name":"neuronal ceroid lipofuscinosis, late infantile, variant","type":"exact"},{"name":"vLINCL","type":"exact"}],"termid":"MONDO:0011144","xrefs":{"Monarch":{"xref_id":"0011144"}}}


id: GO:0106046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of glyoxal from a glycated guanine, to form glycolate and a deglycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine deglycation","termid":"GO:0106044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"guanine deglycation, glyoxal removal","termid":"GO:0106046"}


id: MONDO:0009680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital muscular dystrophy-infantile cataract-hypogonadism syndrome is characterized by congenital muscular dystrophy, infantile cataract and hypogonadism. It has been described in seven individuals from an isolated Norwegian village and in one unrelated individual. Transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:1875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital muscular dystrophy-infantile cataract-hypogonadism syndrome","secondary_identifiers":["GARD:835","OMIM:254000","MEDGEN:376896","UMLS:C1850864"],"synonyms":[{"name":"Bassoe syndrome","type":"exact"},{"name":"benign muscular dystrophy with hypergonadotrophic hypogonadism and congenital cataract","type":"related"},{"name":"familial congenital muscular dystrophy with gonadal dysgenesis","type":"related"},{"name":"muscular dystrophy, congenital, infantile with cataract and hypogonadism","type":"related"},{"name":"muscular dystrophy, congenital, with infantile cataract and hypogonadism","type":"related"}],"termid":"MONDO:0009680","xrefs":{"Monarch":{"xref_id":"0009680"}}}


id: GO:0062126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform primary fatty amides.","definition_xrefs":["PMID:11128635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid primary amide metabolic process","synonyms":[{"name":"primary fatty amide metabolic process","type":"exact"}],"termid":"GO:0062126"}


id: SO:0000635
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript that donates the spliced leader to other mRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mini_exon_donor_RNA","synonyms":[{"name":"mini exon donor RNA","type":"exact"},{"name":"mini-exon donor RNA","type":"exact"}],"termid":"SO:0000635"}


id: PBO:0030943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_depolymerization","termid":"PBO:0030943"}


id: MONDO:0010870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A distal myopathy characterized by weakness of the muscles of the anterior compartment of lower limbs, appearing in the fourth to seventh decade of life.","definition_xrefs":["Orphanet:609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"},{"relation_name":"is_a","term_name":"autosomal dominant titinopathy","termid":"MONDO:0100494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"tibial muscular dystrophy","secondary_identifiers":["SCTID:698846009","DOID:0111078","MEDGEN:333047","UMLS:C1838244","GARD:13154","OMIM:600334"],"synonyms":[{"name":"Finnish tibial muscular dystrophy","type":"exact"},{"name":"TMD","type":"exact"},{"name":"Tmd","type":"related"},{"name":"Udd myopathy","type":"exact"},{"name":"Udd type distal myopathy","type":"exact"},{"name":"distal myopathy, Udd type","type":"exact"},{"name":"distal titinopathy","type":"exact"},{"name":"tardive tibial muscular dystrophy","type":"exact"},{"name":"tibial muscular dystrophy, tardive","type":"related"}],"termid":"MONDO:0010870","xrefs":{"Monarch":{"xref_id":"0010870"}}}


id: PBO:0113803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane stretch-activated calcium ion channel regulatory subunit Yam8","termid":"PBO:0113803"}


id: PBO:0053421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 363","termid":"PBO:0053421"}


id: PBO:0082055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exoribonuclease; required for maturation of 3' ends of 5S rRNA and tRNA-Arg3 from dicistronic transcripts","termid":"PBO:0082055"}


id: PBO:0108905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP6 pseudogene 2","termid":"PBO:0108905"}


id: GO:0009517
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein-pigment complex associated with photosystem II.","definition_xrefs":["ISBN:0582227089","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid light-harvesting complex","termid":"GO:0009503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II","synonyms":[{"name":"LHCII","type":"exact"}],"termid":"GO:0009517"}


id: GO:0050341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thymine + 2-oxoglutarate + O2 = 5-hydroxymethyluracil + succinate + CO2.","definition_xrefs":["EC:1.14.11.6","MetaCyc:THYMINE-DIOXYGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thymine dioxygenase activity","secondary_identifiers":["RHEA:10316"],"synonyms":[{"name":"5-hydroxy-methyluracil dioxygenase activity","type":"related"},{"name":"5-hydroxymethyluracil oxygenase activity","type":"related"},{"name":"thymine 7-hydroxylase activity","type":"related"},{"name":"thymine,2-oxoglutarate dioxygenase activity","type":"related"},{"name":"thymine,2-oxoglutarate:oxygen oxidoreductase (7-hydroxylating)","type":"related"}],"termid":"GO:0050341"}


id: MONDO:0002544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A oligodendroglioma that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain glioma","termid":"MONDO:0005499"},{"relation_name":"is_a","term_name":"oligodendroglioma","termid":"MONDO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brain oligodendroglioma","secondary_identifiers":["DOID:3187","NCIT:C9377","SCTID:254940005","UMLS:C0346286","MEDGEN:91095"],"synonyms":[{"name":"brain oligodendroglioma","type":"exact"},{"name":"oligodendroglioma of brain","type":"exact"},{"name":"oligodendroglioma of the brain","type":"exact"}],"termid":"MONDO:0002544","xrefs":{"Monarch":{"xref_id":"0002544"}}}


id: GO:0006631
data:
  {"annotated_genes":["SJAG_03471","SJAG_00305","SJAG_04913","SJAG_03943","SJAG_01402","SJAG_02769","SJAG_01238","SJAG_02007","SJAG_02717","SJAG_01300","SJAG_00102","SJAG_01458","SJAG_03180","SJAG_02885","SJAG_04972","SJAG_04107","SJAG_04007","SJAG_03526","SJAG_03972","SJAG_03130","SJAG_00099","SJAG_03553","SJAG_00947","SJAG_01356","SJAG_01946","SJAG_04570","SJAG_03909","SJAG_00734","SJAG_03313","SJAG_03198","SJAG_00630","SJAG_02763","SJAG_01271","SJAG_01396","SJAG_00706","SJAG_00902"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72811,77120,93861,101957],"is_not":false,"summary":null,"term":"GO:0006631"},{"annotations":[73611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[95347,64265,77716,91780,70456,77299,67916,107784,109023,102369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006633"},{"annotations":[71629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[80055,111629,73944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[77953,92283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[92284,77950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[75490,97492,98188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[104635,72632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[114066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"},{"annotations":[79201,77619,108676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001676"},{"annotations":[71211],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[98011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[75466],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[70618,75518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[103786,73941,77951,92287,72931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00099":null,"SJAG_00102":null,"SJAG_00305":null,"SJAG_00630":null,"SJAG_00706":null,"SJAG_00734":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_01238":null,"SJAG_01271":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01396":null,"SJAG_01402":null,"SJAG_01458":null,"SJAG_01946":null,"SJAG_02007":null,"SJAG_02717":null,"SJAG_02763":null,"SJAG_02769":null,"SJAG_02885":null,"SJAG_03130":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03313":null,"SJAG_03471":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03909":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_04007":null,"SJAG_04107":null,"SJAG_04570":null,"SJAG_04913":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fatty acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-434313","Reactome:R-HSA-211935","Reactome:R-HSA-8978868","Wikipedia:Fatty_acid_metabolism"],"synonyms":[{"name":"fatty acid metabolism","type":"exact"}],"termid":"GO:0006631","terms_by_termid":{"GO:0001561":null,"GO:0001676":null,"GO:0006631":null,"GO:0006633":null,"GO:0006636":null,"GO:0009062":null,"GO:0009107":null,"GO:0010510":null,"GO:0019367":null,"GO:0030497":null,"GO:0034625":null,"GO:0042758":null,"GO:0042759":null,"GO:0042761":null,"GO:0045717":null,"GO:1900535":null}}


id: PBO:0041805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 16","termid":"PBO:0041805"}


id: MONDO:1010222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic myelomonocytic leukemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia, non-human animal","termid":"MONDO:0700100"},{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"connective tissue disorder, non-human animal","termid":"MONDO:1011309"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"},{"relation_name":"is_a","term_name":"cancer, non-human animal","termid":"MONDO:1011828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic myelomonocytic leukemia, non-human animal","secondary_identifiers":["OMIA:002299"],"termid":"MONDO:1010222","xrefs":{"Monarch":{"xref_id":"1010222"}}}


id: PBO:0056166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic arrest deficient 2 like 1 pseudogene 1","termid":"PBO:0056166"}


id: PBO:0086197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; detected in highly purified mitochondria in high-throughput studies; predicted to be involved in ribosome biogenesis","termid":"PBO:0086197"}


id: GO:0086026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from an atrial cardiomyocyte to an AV node cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cardiac conduction","termid":"GO:0086019"},{"relation_name":"is_a","term_name":"atrial cardiac muscle cell to AV node cell communication","termid":"GO:0086066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell to AV node cell signaling","synonyms":[{"name":"atrial cardiomyocyte to AV node cell signaling","type":"exact"},{"name":"atrial cardiomyocyte to AV node cell signalling","type":"exact"},{"name":"atrial cardiomyocyte to atrioventricular node cell signaling","type":"exact"}],"termid":"GO:0086026"}


id: GO:1901379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of potassium ion transmembrane transport.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transport","termid":"GO:0043266"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of potassium ion transmembrane transport","synonyms":[{"name":"regulation of potassium ion membrane transport","type":"exact"}],"termid":"GO:1901379"}


id: FYPO:0006762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to hydroxyurea. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000294","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal transcription during cellular response to hydroxyurea","synonyms":[{"name":"normal transcription during cellular response to HU","type":"exact"},{"name":"normal transcription during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal transcription in response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006762"}


id: PBO:0046348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 6","termid":"PBO:0046348"}


id: GO:0004919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-9 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-9 receptor activity","synonyms":[{"name":"IL-9 receptor activity","type":"exact"},{"name":"IL-9R","type":"exact"}],"termid":"GO:0004919"}


id: PATO:0001834
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fertile","termid":"PATO:0000955"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased fertility","synonyms":[{"name":"low fertility","type":"exact"}],"termid":"PATO:0001834"}


id: PATO:0000265
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000265 relative visual_ability (obsolete PATO:0000265)","termid":"PATO:0000265"}


id: GO:0090725
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The non-central region or periphery of the migrating motile tip of a growing nerve cell axon or dendrite.","definition_xrefs":["GOC:sl","PMID:16260607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"peripheral region of growth cone","termid":"GO:0090725"}


id: PBO:0062017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 8","termid":"PBO:0062017"}


id: PBO:0083532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SPT4/YGR063C","termid":"PBO:0083532"}


id: GO:0008217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure.","definition_xrefs":["ISBN:0721643949","GOC:dph","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood pressure","secondary_identifiers":["Wikipedia:Blood_pressure#Regulation"],"synonyms":[{"name":"blood pressure homeostasis","type":"related"},{"name":"blood pressure regulation","type":"exact"},{"name":"control of blood pressure","type":"related"}],"termid":"GO:0008217"}


id: PBO:0085182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of three alternate beta-subunits of the Snf1 kinase complex; allows nuclear localization of the Snf1 kinase complex in the presence of a nonfermentable carbon source; necessary and sufficient for phosphorylation of the Mig2p transcription factor in response to alkaline stress; functionally redundant with SIP1 and SIP2 for the phosphorylation of Mig1p in response to glucose deprivation; contains a glycogen-binding domain","termid":"PBO:0085182"}


id: PBO:0089568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Imp3","termid":"PBO:0089568"}


id: GO:0098506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphate groups from the 3' end of a polynucleotide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound metabolic process","termid":"GO:0006139"},{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"},{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polynucleotide 3' dephosphorylation","termid":"GO:0098506"}


id: PBO:0067392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 497, pseudogene","termid":"PBO:0067392"}


id: GO:1902530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein linear polyubiquitination.","definition_xrefs":["GOC:TermGenie","PMID:21931591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein linear polyubiquitination","termid":"GO:1902528"},{"relation_name":"is_a","term_name":"positive regulation of protein polyubiquitination","termid":"GO:1902916"},{"relation_name":"positively_regulates","term_name":"protein linear polyubiquitination","termid":"GO:0097039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"positively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of protein linear polyubiquitination","synonyms":[{"name":"activation of M1 linkage","type":"narrow"},{"name":"activation of protein linear polyubiquitination","type":"narrow"},{"name":"positive regulation of M1 linkage","type":"narrow"},{"name":"up regulation of M1 linkage","type":"narrow"},{"name":"up regulation of protein linear polyubiquitination","type":"exact"},{"name":"up-regulation of M1 linkage","type":"narrow"},{"name":"up-regulation of protein linear polyubiquitination","type":"exact"},{"name":"upregulation of M1 linkage","type":"narrow"},{"name":"upregulation of protein linear polyubiquitination","type":"exact"}],"termid":"GO:1902530"}


id: PBO:0049740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit delta","termid":"PBO:0049740"}


id: PBO:0058629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6761","termid":"PBO:0058629"}


id: PBO:0090853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1688 family fungal conserved protein, implicated in uracil or riboflavin metabolism","termid":"PBO:0090853"}


id: GO:0042726
data:
  {"annotated_genes":["SJAG_01054","SJAG_02491","SJAG_01937","SJAG_04845","SJAG_02360","SJAG_00480","SJAG_04711","SJAG_00376","SJAG_00491"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"},{"annotations":[73045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[114418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046444"},{"annotations":[66119,78293,79066,117473,76790,71620,60240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"},{"annotations":[73044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006771"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a flavin, any derivative of the dimethylisoalloxazine (7,8-dimethylbenzo[g]pteridine-2,4(3H,10H)-dione) skeleton, with a substituent on the 10 position.","definition_xrefs":["GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_01054":null,"SJAG_01937":null,"SJAG_02360":null,"SJAG_02491":null,"SJAG_04711":null,"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavin-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"flavin-containing compound metabolism","type":"exact"},{"name":"riboflavin and derivative metabolic process","type":"related"},{"name":"riboflavin and derivative metabolism","type":"related"},{"name":"vitamin B2 and derivative metabolic process","type":"related"},{"name":"vitamin B2 and derivative metabolism","type":"related"}],"termid":"GO:0042726","terms_by_termid":{"GO:0006747":null,"GO:0006771":null,"GO:0009231":null,"GO:0009398":null,"GO:0046444":null}}


id: GO:0000900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Antagonizes the ribosome-mediated translation of mRNA into a polypeptide via direct binding (through a selective and non-covalent interaction) to nucleic acid.","definition_xrefs":["PMID:29061112","PMID:7523370","GOC:vw","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation repressor activity","termid":"GO:0030371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0045182"],"is_obsolete":false,"name":"mRNA regulatory element binding translation repressor activity","secondary_identifiers":["Reactome:R-HSA-5690886"],"synonyms":[{"name":"translation repressor activity, mRNA regulatory element binding","type":"exact"},{"name":"translation repressor activity, nucleic acid binding","type":"broad"}],"termid":"GO:0000900"}


id: MONDO:0018390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete male infertility due to sperm disorder (obsolete MONDO:0018390)","secondary_identifiers":["Orphanet:399771"],"termid":"MONDO:0018390","xrefs":{"Monarch":{"xref_id":"0018390"}}}


id: PBO:0069990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1285, pseudogene","termid":"PBO:0069990"}


id: PBO:0065107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCA antisense RNA 1","termid":"PBO:0065107"}


id: MONDO:0009986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinopathy, pigmentary, and intellectual disability","secondary_identifiers":["MESH:C538367","OMIM:268050","Orphanet:3084","MEDGEN:167101","UMLS:C0796072"],"synonyms":[{"name":"Mirhosseini-Holmes-Walton syndrome","type":"related"},{"name":"retinal pigmentary degeneration, microcephaly, and severe intellectual disability","type":"related"},{"name":"retinal pigmentary degeneration, microcephaly, and severe mental retardation","type":"related"},{"name":"retinopathy pigmentary intellectual disability","type":"related"},{"name":"retinopathy pigmentary mental retardation","type":"related"},{"name":"retinopathy, pigmentary, and intellectual disability","type":"exact"},{"name":"retinopathy, pigmentary, and mental retardation","type":"exact"}],"termid":"MONDO:0009986","xrefs":{"Monarch":{"xref_id":"0009986"}}}


id: PBO:0058669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6797","termid":"PBO:0058669"}


id: MONDO:0014591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant Robinow syndrome in which the cause of the disease is a mutation in the DVL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Robinow syndrome","termid":"MONDO:0008389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Robinow syndrome 2","secondary_identifiers":["DOID:0060765","UMLS:C4225363","MEDGEN:897039","OMIM:616331","GARD:18548"],"synonyms":[{"name":"DRS2","type":"exact"},{"name":"DVL1 autosomal dominant Robinow syndrome","type":"exact"},{"name":"Robinow syndrome, autosomal dominant 2","type":"related"},{"name":"Robinow syndrome, autosomal dominant type 2","type":"exact"},{"name":"autosomal dominant Robinow syndrome caused by mutation in DVL1","type":"exact"},{"name":"autosomal dominant Robinow syndrome type 2","type":"exact"}],"termid":"MONDO:0014591","xrefs":{"Monarch":{"xref_id":"0014591"}}}


id: GO:0042030
data:
  {"annotated_genes":["SJAG_02470","SJAG_04422","SJAG_03717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100833,118245,118307],"is_not":false,"summary":null,"term":"GO:0042030"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces an ATP hydrolysis activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase regulator activity","termid":"GO:0060590"},{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"},{"relation_name":"negatively_regulates","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02470":null,"SJAG_03717":null,"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0098772"],"is_obsolete":false,"name":"ATPase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosinetriphosphatase inhibitor","type":"exact"}],"termid":"GO:0042030","terms_by_termid":{"GO:0042030":null}}


id: PBO:0052930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 20-2","termid":"PBO:0052930"}


id: GO:1904951
data:
  {"annotated_genes":["SJAG_04464","SJAG_01805","SJAG_01245","SJAG_04312","SJAG_03048","SJAG_03453","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94148,100761,102167,111322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[94710,91190,102699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of protein localization.","definition_xrefs":["GOC:TermGenie","PMID:22761445","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization","termid":"GO:0070201"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"establishment of protein localization","termid":"GO:0045184"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of protein localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of establishment of protein localisation","type":"narrow"},{"name":"activation of establishment of protein localization","type":"narrow"},{"name":"activation of protein positioning","type":"narrow"},{"name":"activation of protein recruitment","type":"narrow"},{"name":"positive regulation of establishment of protein localisation","type":"exact"},{"name":"positive regulation of protein positioning","type":"exact"},{"name":"positive regulation of protein recruitment","type":"exact"},{"name":"up regulation of establishment of protein localisation","type":"exact"},{"name":"up regulation of establishment of protein localization","type":"exact"},{"name":"up regulation of protein positioning","type":"exact"},{"name":"up regulation of protein recruitment","type":"exact"},{"name":"up-regulation of establishment of protein localisation","type":"exact"},{"name":"up-regulation of establishment of protein localization","type":"exact"},{"name":"up-regulation of protein positioning","type":"exact"},{"name":"up-regulation of protein recruitment","type":"exact"},{"name":"upregulation of establishment of protein localisation","type":"exact"},{"name":"upregulation of establishment of protein localization","type":"exact"},{"name":"upregulation of protein positioning","type":"exact"},{"name":"upregulation of protein recruitment","type":"exact"}],"termid":"GO:1904951","terms_by_termid":{"GO:0042307":null,"GO:0046827":null}}


id: GO:0032709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-25 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-25 production","termid":"GO:0032669"},{"relation_name":"negatively_regulates","term_name":"interleukin-25 production","termid":"GO:0032629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-25 production","secondary_identifiers":["GO:0045533","GO:0150149"],"synonyms":[{"name":"down regulation of interleukin-25 production","type":"exact"},{"name":"down-regulation of interleukin-25 production","type":"exact"},{"name":"downregulation of interleukin-25 production","type":"exact"},{"name":"inhibition of interleukin-25 production","type":"narrow"},{"name":"negative regulation of IL-25 production","type":"exact"},{"name":"negative regulation of interleukin-25 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-25 secretion","type":"narrow"}],"termid":"GO:0032709"}


id: MONDO:0006940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peripheral nerve lesion that involves the radial nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial neuropathy","termid":"MONDO:0001459"},{"relation_name":"is_a","term_name":"neuritis of upper limb","termid":"MONDO:0003607"},{"relation_name":"is_a","term_name":"brachial plexus neuritis","termid":"MONDO:0006682"},{"relation_name":"is_a","term_name":"peripheral nerve lesion","termid":"MONDO:0024334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"radial nerve lesion","secondary_identifiers":["DOID:12170","UMLS:C0154744","MEDGEN:102317","ICD9:354.3","SCTID:193137006","EFO:1001143","MedDRA:10061477"],"synonyms":[{"name":"lesion of radial nerve","type":"exact"},{"name":"peripheral nerve lesion of radial nerve","type":"exact"},{"name":"radial nerve lesions","type":"exact"},{"name":"radial nerve peripheral nerve lesion","type":"exact"}],"termid":"MONDO:0006940","xrefs":{"Monarch":{"xref_id":"0006940"}}}


id: MONDO:0023062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalocele anencephaly","termid":"MONDO:0023062","xrefs":{"Monarch":{"xref_id":"0023062"}}}


id: GO:0003021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of carbon dioxide are received and are converted to a molecular signal by chemoreceptors in the carotid bodies and the aortic bodies.","definition_xrefs":["GOC:mtg_cardio","ISBN:0323031951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of carbon dioxide","termid":"GO:0003031"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by chemoreceptor signaling","termid":"GO:0002007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of increased carbon dioxide by chemoreceptor signaling","synonyms":[{"name":"detection of increased carbon dioxide by chemoreceptor signalling","type":"exact"}],"termid":"GO:0003021"}


id: GO:0022030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of glial cells through the telencephalon.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell migration","termid":"GO:0008347"},{"relation_name":"is_a","term_name":"telencephalon cell migration","termid":"GO:0022029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon glial cell migration","termid":"GO:0022030"}


id: PBO:0069662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 939, pseudogene","termid":"PBO:0069662"}


id: GO:0018261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The guanylylation of peptidyl-lysine to form peptidyl-N6-(phospho-5'-guanosine)-L-lysine.","definition_xrefs":["RESID:AA0228"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine guanylylation (obsolete GO:0018261)","termid":"GO:0018261"}


id: PBO:0017784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP(CTP) tRNA nucleotidyltransferase Cca1 (predicted)","termid":"PBO:0017784"}


id: PBO:0089037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding","termid":"PBO:0089037"}


id: GO:0140759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 56) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 56). This reaction is the addition of a methyl group to the lysine residue at position 56 of the histone H3 protein.","definition_xrefs":["PMID:28743002","PMID:23451023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0016740","GO:0008276","GO:0003824","GO:0016741","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"histone H3K56 methyltransferase activity","synonyms":[{"name":"histone H3K56 methylase activity","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H3-K56 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-K56 specific)","type":"exact"},{"name":"histone-H3K56 methyltransferase activity","type":"exact"}],"termid":"GO:0140759"}


id: MONDO:0005476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the atrioventricular node.","definition_xrefs":["MONDO:patterns/location_top"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conduction system disorder","termid":"MONDO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrioventricular node disorder","secondary_identifiers":["UMLS:C3276314","EFO:0005305","MEDGEN:477944"],"synonyms":[{"name":"atrioventricular node disease","type":"exact"},{"name":"atrioventricular node disease or disorder","type":"exact"},{"name":"disease of atrioventricular node","type":"exact"},{"name":"disease or disorder of atrioventricular node","type":"exact"},{"name":"disorder of atrioventricular node","type":"exact"}],"termid":"MONDO:0005476","xrefs":{"Monarch":{"xref_id":"0005476"}}}


id: GO:0035844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cloaca over time, from it's formation to the mature structure. The cloaca is the common chamber into which intestinal, genital and urinary canals open in vertebrates.","definition_xrefs":["GOC:dgh","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"urogenital system development","termid":"GO:0001655"},{"relation_name":"part_of","term_name":"digestive tract morphogenesis","termid":"GO:0048546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cloaca development","synonyms":[{"name":"cloacal development","type":"exact"}],"termid":"GO:0035844"}


id: PBO:0069960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1254, pseudogene","termid":"PBO:0069960"}


id: GO:0010945
data:
  {"annotated_genes":["SJAG_03443","SJAG_02247","SJAG_01180"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61517,67151,67592],"is_not":false,"summary":null,"term":"GO:0010945"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an acyl-coenzyme A or its derivatives + H2O = adenosine 3',5'-bisphosphate + an acyl-4'-phosphopantetheine + 2 H+. This reaction can also use coenzyme A as a substrate.","definition_xrefs":["PMID:16185196","PMID:10922370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01180":null,"SJAG_02247":null,"SJAG_03443":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"coenzyme A diphosphatase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["Reactome:R-HSA-9837354","https://github.com/geneontology/go-ontology/issues/28938","Reactome:R-HSA-6809354","Reactome:R-HSA-6810474"],"synonyms":[{"name":"CoA diphosphatase activity","type":"related"},{"name":"CoA pyrophosphatase activity","type":"related"},{"name":"coenzyme A pyrophosphatase activity","type":"related"}],"termid":"GO:0010945","terms_by_termid":{"GO:0010945":null}}


id: GO:0051510
data:
  {"annotated_genes":["SJAG_02169","SJAG_00514","SJAG_03581","SJAG_00244","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94916,96180,90205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[91066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[115352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of unidimensional cell growth, the process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell elongation","type":"narrow"}],"termid":"GO:0051510","terms_by_termid":{"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: PR:O94637
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA threonylcarbamoyladenosine biosynthesis protein OSGEP that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03775","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA N6-adenosine threonylcarbamoyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.03","secondary_identifiers":["UniProtKB:O94637"],"synonyms":[{"name":"N6-L-threonylcarbamoyladenine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-OSGEP","type":"exact"},{"name":"pombe glycoprotease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A37 threonylcarbamoyladenosine biosynthesis protein kae1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA threonylcarbamoyladenosine biosynthesis protein kae1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94637"}


id: PBO:0038705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin epsilon 1, pseudogene","termid":"PBO:0038705"}


id: PBO:0080218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vinculin/alpha-catenin family member 1, pseudogene","termid":"PBO:0080218"}


id: PBO:0048061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 10","termid":"PBO:0048061"}


id: PBO:0090426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase E","termid":"PBO:0090426"}


id: GO:1901225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of regulation of transcription from RNA polymerase II promoter involved in heart development.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter involved in heart development (obsolete GO:1901225)","synonyms":[{"name":"down regulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"down regulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"down regulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"down regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"down regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"down regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"down regulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"down regulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"down regulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"down regulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"down regulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"down regulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"down-regulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"down-regulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"down-regulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"down-regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"down-regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"down-regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"down-regulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"down-regulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"down-regulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"down-regulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"down-regulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"down-regulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"downregulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"downregulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"downregulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"downregulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"downregulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"downregulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"downregulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"downregulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"downregulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"downregulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"downregulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"downregulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"inhibition of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"inhibition of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"inhibition of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"inhibition of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"inhibition of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"inhibition of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"inhibition of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"inhibition of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"inhibition of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"inhibition of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"inhibition of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"inhibition of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"narrow"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"negative regulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"negative regulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"negative regulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"negative regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"negative regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"negative regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"negative regulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"negative regulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"negative regulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"negative regulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"negative regulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"negative regulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"}],"termid":"GO:1901225"}


id: GO:0052884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + all-trans-retinyl palmitate = 11-cis-retinol + H+ + palmitate.","definition_xrefs":["RHEA:31775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinyl-palmitate esterase activity","termid":"GO:0050253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming activity","secondary_identifiers":["Reactome:R-HSA-2453833"],"synonyms":[{"name":"all-trans-retinol isomerase:hydrolase activity","type":"broad"},{"name":"all-trans-retinyl-palmitate hydrolase activity","type":"broad"},{"name":"retinoid isomerohydrolase activity","type":"broad"},{"name":"retinol isomerase activity","type":"broad"}],"termid":"GO:0052884"}


id: GO:0035772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-13 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-13","termid":"GO:0035963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-13-mediated signaling pathway","synonyms":[{"name":"IL-13-mediated signaling pathway","type":"exact"},{"name":"interleukin-13-mediated signalling pathway","type":"exact"}],"termid":"GO:0035772"}


id: PBO:0055025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2440","termid":"PBO:0055025"}


id: GO:0097363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + [protein]-L-serine = UDP + [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine, or UDP-N-acetyl-D-glucosamine + [protein]-L-threonine = UDP + [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-threonine.","definition_xrefs":["GOC:sart","PMID:22158438","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"protein O-acetylglucosaminyltransferase activity","secondary_identifiers":["EC:2.4.1.255","Reactome:R-HSA-9687828"],"synonyms":[{"name":"O-GlcNAc transferase","type":"exact"},{"name":"O-linked N-acetylglucosaminyltransferase","type":"exact"},{"name":"OGTase","type":"exact"},{"name":"UDP-N-acetyl-D-glucosamine:protein-O-beta-N-acetyl-D-glucosaminyl transferase","type":"exact"},{"name":"protein O-GlcNAc transferase activity","type":"exact"}],"termid":"GO:0097363"}


id: PBO:0065976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD54L2 pseudogene 1","termid":"PBO:0065976"}


id: MONDO:0007478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant form of Kenny-Caffey Syndrome due to mutation(s) in the FAM111A gene, encoding protein FAM111A. This condition is characterized by transient hypocalcemia, delayed closure of the anterior fontanel, eye anomalies, including microphthalmia, proportionate short stature, and cortical thickening and medullary stenosis of the tubular bones.","definition_xrefs":["NCIT:C130993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Kenny-Caffey syndrome","termid":"MONDO:0016516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Kenny-Caffey syndrome","secondary_identifiers":["MEDGEN:1373312","OMIM:127000","Orphanet:93325","DOID:0080723","UMLS:C4316787","GARD:83"],"synonyms":[{"name":"KCS2","type":"related"},{"name":"Kenny syndrome","type":"broad"},{"name":"Kenny-Caffey syndrome type 2","type":"exact"},{"name":"Kenny-Caffey syndrome, autosomal dominant","type":"exact"},{"name":"Kenny-Caffey syndrome, type 2","type":"related"},{"name":"dwarfism, cortical thickening of tubular bones and transient hypocalcemia","type":"related"},{"name":"dwarfism, cortical thickening of tubular bones, and transient hypocalcemia","type":"related"}],"termid":"MONDO:0007478","xrefs":{"Monarch":{"xref_id":"0007478"}}}


id: GO:0031043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 7 O-glycan structure, GalNAc-alpha-(1->6)-GalNAc.","definition_xrefs":["GOC:mah","GOC:pr","PMID:10580130"],"gene_count":0,"genotype_count":0,"name":"obsolete O-glycan processing, core 7 (obsolete GO:0031043)","termid":"GO:0031043"}


id: PBO:0073925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 13","termid":"PBO:0073925"}


id: PBO:0082546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein with similarity to glucanases; may play a role in conjugation during mating based on mutant phenotype and its regulation by Ste12p; SWC10 has a paralog, SCW4, that arose from the whole genome duplication","termid":"PBO:0082546"}


id: MONDO:0010176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Joubert syndrome with orofaciodigital defect (or oral-facial-digital syndrome type 6, OFD6) is a very rare subtype of Joubert syndrome and related disorders (JSRD) characterized by the neurological features of JS associated with orofacial anomalies and often polydactyly.","definition_xrefs":["Orphanet:2754"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"Joubert syndrome 17","termid":"MONDO:0013824"},{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0020022"],"is_obsolete":false,"name":"orofaciodigital syndrome type 6","secondary_identifiers":["NCIT:C124841","DOID:0060376","MESH:C536531","SCTID:721873007","MEDGEN:411200","GARD:4412","OMIM:277170","UMLS:C2745997"],"synonyms":[{"name":"Joubert syndrome with oral-facial-digital syndrome","type":"exact"},{"name":"Joubert syndrome with orofaciodigital defect","type":"exact"},{"name":"OFD6","type":"exact"},{"name":"Ofds 6","type":"related"},{"name":"Varadi syndrome","type":"exact"},{"name":"Varadi-Papp syndrome","type":"exact"},{"name":"Váradi syndrome","type":"related"},{"name":"Váradi-Papp syndrome","type":"related"},{"name":"oral-Facial-digital syndrome, type 6","type":"related"},{"name":"oral-facial-digital syndrome type 6","type":"exact"},{"name":"orofaciodigital syndrome 6","type":"related"},{"name":"orofaciodigital syndrome VI","type":"exact"},{"name":"orofaciodigital syndrome type 6","type":"exact"},{"name":"polydactyly - cleft lip/palate - psychomotor retardation","type":"related"},{"name":"polydactyly cleft lip palate psychomotor retardation","type":"related"},{"name":"polydactyly, cleft Lip/palate or lingual lump, and psychomotor retardation","type":"related"},{"name":"polydactyly-cleft lip/palate-psychomotor retardation syndrome","type":"exact"}],"termid":"MONDO:0010176","xrefs":{"Monarch":{"xref_id":"0010176"}}}


id: PBO:0053235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 1","termid":"PBO:0053235"}


id: GO:0038199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ethylene and transmitting the signal in the cell to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","PMID:22467798","PMID:24012247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"ethylene receptor activity","synonyms":[{"name":"C2H4 receptor activity","type":"exact"},{"name":"ethylene response sensor","type":"related"}],"termid":"GO:0038199"}


id: FYPO:0006460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone H2A phosphorylation occurs to a greater extent than normal in regions containing protein-coding genes during the first meiotic nuclear division. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during meiosis I","termid":"FYPO:0003565"},{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at protein coding gene during meiosis I","synonyms":[{"name":"increased histone H2A phosphorylation at protein coding gene during first meiotic nuclear division","type":"exact"},{"name":"increased histone H2A phosphorylation at protein-coding gene during meiosis I","type":"exact"}],"termid":"FYPO:0006460"}


id: PBO:0051456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 7-35 (pseudogene)","termid":"PBO:0051456"}


id: FYPO:0004314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the CENP-A containing chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric chromatin","termid":"FYPO:0005072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to CENP-A containing chromatin","synonyms":[{"name":"normal protein localisation to CENP-A containing chromatin","type":"exact"},{"name":"normal protein localization to CENP-A containing chromatin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to CENP-A containing chromatin during vegetative growth","type":"exact"},{"name":"normal protein localization to centromeric core region chromatin","type":"exact"}],"termid":"FYPO:0004314"}


id: PBO:0049090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 146","termid":"PBO:0049090"}


id: PBO:0061557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase domain containing 1","termid":"PBO:0061557"}


id: PBO:0086958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of phospholipase D (Spo14p); interacts with Spo14p and regulates its catalytic activity; capable of buffering the toxicity of C16:0 platelet activating factor, a lipid that accumulates intraneuronally in Alzheimer's patients","termid":"PBO:0086958"}


id: SO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of sequence surrounding a transposable element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flanking_region","termid":"SO:0000239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_flanking_region","synonyms":[{"name":"transposable element flanking region","type":"exact"}],"termid":"SO:0000364"}


id: MONDO:0015269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Symmetrical thalamic calcifications are clinically distinguished by a low Apgar score, spasticity or marked hypotonia, weak or absent cry, poor feeding, and facial diplegia or weakness.","definition_xrefs":["Orphanet:1314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symmetrical thalamic calcifications","secondary_identifiers":["GARD:5070","UMLS:C4304914","MEDGEN:930583","SCTID:719164000"],"synonyms":[{"name":"bilateral symmetrical thalamic gliosis","type":"exact"}],"termid":"MONDO:0015269","xrefs":{"Monarch":{"xref_id":"0015269"}}}


id: PBO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR51b (predicted)","termid":"PBO:0000835"}


id: MONDO:0020835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"},{"relation_name":"is_a","term_name":"hereditary methemoglobinemia","termid":"MONDO:0018963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"methemoglobinemia, alpha type","secondary_identifiers":["OMIM:617973","GARD:16277","MEDGEN:1635511","UMLS:C4693798"],"synonyms":[{"name":"methemoglobinemia, alpha type","type":"exact"}],"termid":"MONDO:0020835","xrefs":{"Monarch":{"xref_id":"0020835"}}}


id: PBO:0015693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 subfamily, Dis2","termid":"PBO:0015693"}


id: PBO:0086804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YDL186W is not an essential gene","termid":"PBO:0086804"}


id: GO:0032399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a HECT, 'Homologous to the E6-AP Carboxy-Terminus', domain of a protein.","definition_xrefs":["Pfam:PF00632","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"HECT domain binding","termid":"GO:0032399"}


id: MONDO:0024564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Coats plus syndrome in which the cause of the disease is a mutation in the CTC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Coats plus syndrome","termid":"MONDO:0012815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0019303","MONDO:0005328"],"is_obsolete":false,"name":"cerebroretinal microangiopathy with calcifications and cysts 1","secondary_identifiers":["OMIM:612199","UMLS:C4552029","GARD:18441","MEDGEN:1636142"],"synonyms":[{"name":"CRMCC1","type":"related"},{"name":"CTC1 Coats plus syndrome","type":"exact"},{"name":"Coats plus syndrome","type":"related"},{"name":"Coats plus syndrome caused by mutation in CTC1","type":"exact"},{"name":"Crmcc","type":"related"},{"name":"cerebroretinal microangiopathy with calcifications and cysts","type":"broad"},{"name":"cerebroretinal microangiopathy with calcifications and cysts 1","type":"exact"}],"termid":"MONDO:0024564","xrefs":{"Monarch":{"xref_id":"0024564"}}}


id: PBO:0057507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 625","termid":"PBO:0057507"}


id: MONDO:0005134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune demyelinating disease of the central nervous system that is produced experimentally in animals by the injection of homogenized brain or spinal cord in Freund's adjuvant. Myelin basic protein appears to be the antigen that elicits the hypersensitivity immune response which is characterized by focal areas of lymphocyte and macrophage infiltration into the brain, associated with demyelination and destruction of the blood-brain barrier. Experimental allergic encephalomyelitis (EAE) is used as an animal model for demyelinating diseases of the human central nervous system such as multiple sclerosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalomyelitis","termid":"MONDO:0005156"},{"relation_name":"excluded_subClassOf","term_name":"CNS demyelinating autoimmune disease","termid":"MONDO:0006704"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"experimental autoimmune encephalomyelitis","secondary_identifiers":["EFO:0001066","MESH:D004681"],"termid":"MONDO:0005134","xrefs":{"Monarch":{"xref_id":"0005134"}}}


id: PBO:0028034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_post-anaphase_microtubule_array_organization","termid":"PBO:0028034"}


id: PBO:0055505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2939","termid":"PBO:0055505"}


id: PBO:0043405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 2","termid":"PBO:0043405"}


id: GO:0042793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of RNA from a plastid DNA template, usually by a specific plastid RNA polymerase.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"plastid transcription","synonyms":[{"name":"transcription from plastid promoter","type":"exact"}],"termid":"GO:0042793"}


id: MOD:00857
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alaninium (protonated L-alanine) residue to an N,N,N-trimethyl-L-alanine.","definition_xrefs":["PubMed:3979397","PubMed:332162","PubMed:6778808","PubMed:7715456","Unimod:37#A","PubMed:12590383"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated L-alanine (L-alaninium) residue","termid":"MOD:00856"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated residue","termid":"MOD:01687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethyl-L-alanine (from L-alaninium)","synonyms":[{"name":"N2Me3Ala","type":"exact"}],"termid":"MOD:00857"}


id: GO:0060132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a prolactin secreting cell over time, from its formation to the mature structure. A prolactin secreting cell is an acidophilic cell of the anterior pituitary that produces prolactin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"prolactin secreting cell differentiation","termid":"GO:0060127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prolactin secreting cell development","synonyms":[{"name":"epsilon-acidophil development","type":"exact"},{"name":"lactotrope development","type":"exact"},{"name":"lactotroph development","type":"exact"},{"name":"lactotropic cell development","type":"exact"},{"name":"mammotrope development","type":"exact"},{"name":"mammotroph development","type":"exact"},{"name":"mammotrophic cell development","type":"exact"},{"name":"mammotropic cell development","type":"exact"}],"termid":"GO:0060132"}


id: PBO:0065098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent type I regulatory subunit alpha pseudogene 1","termid":"PBO:0065098"}


id: GO:0062158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: chloride(out) + proton(in) = chloride(in) + proton(out).","definition_xrefs":["PMID:14985752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"chloride:proton antiporter activity","termid":"GO:0062158"}


id: MONDO:0001969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of defective gonadal development in patients with a wide spectrum of chromosomal mosaic variants. Their karyotypes are of partial sex chromosome monosomy resulting from an absence or an abnormal second sex chromosome (X or Y). Karyotypes include 45,X/46,xx; 45,X/46,xx/47,xxx; 46,xxp-; 45,X/46,xy; 45,X/47,xyy; 46,xypi; etc. The spectrum of phenotypes may range from phenotypic female to phenotypic male including variations in gonads and internal and external genitalia, depending on the ratio in each gonad of 45,X primordial germ cells to those with normal 46,xx or 46,xy constitution.","definition_xrefs":["MESH:D006060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Turner syndrome","termid":"MONDO:0019499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"mixed gonadal dysgenesis","secondary_identifiers":["UMLS:C0018055","GARD:2539","SCTID:83579008","MEDGEN:6654","NANDO:2200388","DOID:14449"],"synonyms":[{"name":"gonadal dysgenesis mixed","type":"related"}],"termid":"MONDO:0001969","xrefs":{"Monarch":{"xref_id":"0001969"}}}


id: GO:0098025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Multiprotein component at the distal (head) end of the virus tail to which fibers of tailed viruses may be attached.","definition_xrefs":["GOC:bm","VZ:3957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"virus tail","termid":"GO:0098015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus tail, baseplate","synonyms":[{"name":"bacteriophage baseplate","type":"narrow"},{"name":"tail structure","type":"related"},{"name":"tail tip","type":"related"}],"termid":"GO:0098025"}


id: PBO:0017479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of_or_within","termid":"PBO:0017479"}


id: MONDO:0003032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the superior vena cava.","definition_xrefs":["NCIT:C5378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"},{"relation_name":"is_a","term_name":"great vessel cancer","termid":"MONDO:0040676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"superior vena cava angiosarcoma","secondary_identifiers":["MEDGEN:234373","UMLS:C1336530","DOID:4522"],"synonyms":[{"name":"angiosarcoma (disease) of anterior vena cava","type":"exact"},{"name":"angiosarcoma of Superior vena cava","type":"exact"},{"name":"angiosarcoma of the Superior vena cava","type":"exact"},{"name":"anterior vena cava angiosarcoma (disease)","type":"exact"}],"termid":"MONDO:0003032","xrefs":{"Monarch":{"xref_id":"0003032"}}}


id: GO:0002428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses peptide antigen in association with an MHC class Ib protein complex on its cell surface. The peptide antigen may originate from an endogenous or exogenous protein. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E family.","definition_xrefs":["GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of peptide antigen via MHC class Ib","synonyms":[{"name":"peptide antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002428"}


id: MONDO:0004672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small bowel infection that is caused by Fasciolopsis buski, which is endemic in the Far East and Southeast Asia, and which is transmitted via the consumption of raw or undercooked aquatic plants. The spectrum of manifestations range from asymptomatic to intestinal symptoms from local invasion or allergic response.","definition_xrefs":["NCIT:C128388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciolopsiasis","secondary_identifiers":["ICD10CM:B66.5","UMLS:C0015656","MEDGEN:5125","icd11.foundation:830824191","ICD9:121.4","DOID:888","SCTID:54266002","Orphanet:658909"],"synonyms":[{"name":"infection by Fasciolopsis buski","type":"exact"},{"name":"infectious disease by Fasciolopsis","type":"exact"}],"termid":"MONDO:0004672","xrefs":{"Monarch":{"xref_id":"0004672"}}}


id: GO:0141053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin to a histone H2A substrate.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone ubiquitin ligase activity","termid":"GO:0140852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0019787","GO:0140096","GO:0003674","GO:0004842","GO:0016740"],"is_obsolete":false,"name":"histone H2A ubiquitin ligase activity","termid":"GO:0141053"}


id: PBO:0057689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1278","termid":"PBO:0057689"}


id: PBO:0051032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family member 1 pseudogene 2","termid":"PBO:0051032"}


id: GO:0102636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine = 3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine + 2 5-oxo-L-prolinate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine gamma-glutamylcyclotransferase activity (obsolete GO:0102636)","termid":"GO:0102636"}


id: GO:0120542
data:
  {"annotated_genes":["SJAG_01414","SJAG_03822","SJAG_03370","SJAG_00240"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99055,99056,114921,114922],"is_not":false,"summary":null,"term":"GO:0120542"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ethanol + NAD+ = acetaldehyde + NADH + H+.","definition_xrefs":["RHEA:25290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_03370":null,"SJAG_03822":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ethanol dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120542","terms_by_termid":{"GO:0120542":null}}


id: PBO:0055162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2582","termid":"PBO:0055162"}


id: PBO:0011442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex subunit Dsc3","termid":"PBO:0011442"}


id: PBO:0078103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 11","termid":"PBO:0078103"}


id: GO:0052041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of host programmed cell death, leading to a decrease in the frequency, rate or extent of programmed cell death in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host programmed cell death","termid":"GO:0052040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host programmed cell death","synonyms":[{"name":"down regulation by symbiont of host programmed cell death","type":"exact"},{"name":"down-regulation by symbiont of host programmed cell death","type":"exact"},{"name":"downregulation by symbiont of host programmed cell death","type":"exact"},{"name":"inhibition by symbiont of host programmed cell death","type":"narrow"},{"name":"inhibition of host programmed cell death","type":"exact"},{"name":"negative regulation by symbiont of host programmed cell death","type":"exact"},{"name":"suppression by symbiont of host PCD","type":"exact"},{"name":"suppression by symbiont of host programmed cell death","type":"exact"}],"termid":"GO:0052041"}


id: PBO:0069066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 313, pseudogene","termid":"PBO:0069066"}


id: GO:0045211
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters cross the synaptic cleft and transmit the signal to the postsynaptic membrane.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"postsynaptic membrane","synonyms":[{"name":"post-synaptic membrane","type":"exact"}],"termid":"GO:0045211"}


id: PBO:0059014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 1","termid":"PBO:0059014"}


id: GO:0047146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sterigmatocystin + S-adenosyl-L-methionine = 7-O-methylsterigmatocystin + S-adenosyl-homocysteine.","definition_xrefs":["MetaCyc:2.1.1.110-RXN","EC:2.1.1.110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sterigmatocystin 7-O-methyltransferase activity","secondary_identifiers":["RHEA:15561"],"synonyms":[{"name":"O-methyltransferase II activity","type":"related"},{"name":"S-adenosyl-L-methionine:sterigmatocystin 7-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:sterigmatocystin 8-O-methyltransferase activity","type":"related"},{"name":"sterigmatocystin 8-O-methyltransferase activity","type":"related"},{"name":"sterigmatocystin methyltransferase activity","type":"related"}],"termid":"GO:0047146"}


id: GO:1904574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine insertion sequence binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:19716792"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of selenocysteine insertion sequence binding (obsolete GO:1904574)","synonyms":[{"name":"down regulation of SECIS binding","type":"exact"},{"name":"down regulation of selenocysteine insertion sequence binding","type":"exact"},{"name":"down-regulation of SECIS binding","type":"exact"},{"name":"down-regulation of selenocysteine insertion sequence binding","type":"exact"},{"name":"downregulation of SECIS binding","type":"exact"},{"name":"downregulation of selenocysteine insertion sequence binding","type":"exact"},{"name":"inhibition of SECIS binding","type":"narrow"},{"name":"inhibition of selenocysteine insertion sequence binding","type":"narrow"},{"name":"negative regulation of SECIS binding","type":"exact"}],"termid":"GO:1904574"}


id: PBO:0034482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_polarity","termid":"PBO:0034482"}


id: PBO:0079674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2 pseudogene 4","termid":"PBO:0079674"}


id: GO:2000395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquitin-dependent endocytosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"regulates","term_name":"ubiquitin-dependent endocytosis","termid":"GO:0070086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of ubiquitin-dependent endocytosis","synonyms":[{"name":"regulation of ubiquitin-mediated endocytosis","type":"exact"}],"termid":"GO:2000395"}


id: PBO:0043862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine O-acetyltransferase","termid":"PBO:0043862"}


id: PBO:0049286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 5","termid":"PBO:0049286"}


id: PATO:0001723
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female receptivity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"female receptivity","termid":"PATO:0001720"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased female receptivity","synonyms":[{"name":"high female receptivity","type":"exact"}],"termid":"PATO:0001723"}


id: GO:0001040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase III (Pol III) complex, typically composed of seventeen subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way. Once recruited to an RNA polymerase III hybrid type promoter, binds to DNA, recruits RNA polymerase III and facilitates the transition from the closed to the open complex.","definition_xrefs":["PMID:12381659","GOC:txnOH-2018"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III hybrid type promoter TFIIIB-type transcription factor activity (obsolete GO:0001040)","termid":"GO:0001040"}


id: GO:0008444
data:
  {"annotated_genes":["SJAG_00168"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71640],"is_not":false,"summary":null,"term":"GO:0008444"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + CDP-diacylglycerol = 3-(3-sn-phosphatidyl)-sn-glycerol 1-phosphate + CMP + H+.","definition_xrefs":["EC:2.7.8.5","RHEA:12593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-alcohol phosphatidyltransferase activity","termid":"GO:0017169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00168":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016780","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1482939","KEGG_REACTION:R01801","MetaCyc:PHOSPHAGLYPSYN-RXN"],"synonyms":[{"name":"3-phosphatidyl-1'-glycerol-3'-phosphate synthase activity","type":"related"},{"name":"CDP-diacylglycerol:sn-glycerol-3-phosphate 3-phosphatidyltransferase activity","type":"related"},{"name":"CDPdiacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity","type":"related"},{"name":"CDPdiacylglycerol-sn-glycerol-3-phosphate 3-phosphatidyltransferase activity","type":"related"},{"name":"CDPdiacylglycerol:glycerol-3-phosphate phosphatidyltransferase activity","type":"related"},{"name":"CDPdiacylglycerol:sn-glycero-3-phosphate phosphatidyltransferase activity","type":"related"},{"name":"PGP synthase activity","type":"related"},{"name":"cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):sn-glycerol-3-phosphate phosphatidyltransferase activity","type":"related"},{"name":"glycerol 3-phosphate phosphatidyltransferase activity","type":"related"},{"name":"glycerol phosphate phosphatidyltransferase activity","type":"related"},{"name":"glycerophosphate phosphatidyltransferase activity","type":"related"},{"name":"phosphatidylglycerol phosphate synthase activity","type":"related"},{"name":"phosphatidylglycerol phosphate synthetase activity","type":"related"},{"name":"phosphatidylglycerolphosphate synthase activity","type":"related"},{"name":"phosphatidylglycerophosphate synthase activity","type":"related"},{"name":"phosphatidylglycerophosphate synthetase activity","type":"related"},{"name":"sn-glycerol-3-phosphate phosphatidyltransferase activity","type":"related"}],"termid":"GO:0008444","terms_by_termid":{"GO:0008444":null}}


id: GO:0033900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA precursor into two, leaving 5'-hydroxy and 3'-phosphate groups.","definition_xrefs":["EC:3.1.27.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"ribonuclease F activity","secondary_identifiers":["MetaCyc:3.1.27.7-RXN"],"synonyms":[{"name":"RNase F activity","type":"related"},{"name":"ribonuclease F (E. coli) activity","type":"related"}],"termid":"GO:0033900"}


id: PBO:0077600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMPRSS11B N-terminal like, pseudogene","termid":"PBO:0077600"}


id: PBO:0080549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 8","termid":"PBO:0080549"}


id: PBO:0046624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 5","termid":"PBO:0046624"}


id: PBO:0030385
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cortex_morphology_during_nitrogen_starvation","termid":"PBO:0030385"}


id: PBO:0061338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein pseudogene 1","termid":"PBO:0061338"}


id: PBO:0080597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 27","termid":"PBO:0080597"}


id: GO:0046113
data:
  {"annotated_genes":["SJAG_04297","SJAG_04299","SJAG_05287","SJAG_01997"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006147"},{"annotations":[73862,92116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006145"},{"annotations":[117660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleobase, a nitrogenous base that is a constituent of a nucleic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"nucleobase metabolic process","termid":"GO:0009112"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01997":null,"SJAG_04297":null,"SJAG_04299":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nucleobase catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase breakdown","type":"exact"},{"name":"nucleobase catabolism","type":"exact"},{"name":"nucleobase degradation","type":"exact"}],"termid":"GO:0046113","terms_by_termid":{"GO:0006145":null,"GO:0006147":null,"GO:0009115":null}}


id: FYPO:0002217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable, elongated, and curved along the long axis in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable curved elongated vegetative cell population (obsolete FYPO:0002217)","synonyms":[{"name":"population of curved viable long cells","type":"exact"},{"name":"viable curved long vegetative cell population","type":"exact"}],"termid":"FYPO:0002217"}


id: MONDO:0021777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pancarditis, involving inflammation of the endocardium, myocardium, and epicardium. It results from an autoimmune reaction following an infection with Streptococcus pyogenes (Group A Streptococci).","definition_xrefs":["NCIT:C34985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic heart disease","termid":"MONDO:0006955"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"acute rheumatic heart disease","secondary_identifiers":["ICD9:391.8","MEDGEN:19779","UMLS:C0035440","SCTID:312591002","ICD9:391.9"],"synonyms":[{"name":"Active rheumatic fever with heart involvement","type":"related"},{"name":"active rheumatic fever with heart involvement","type":"related"},{"name":"acute Rheumatic Heart Disease","type":"related"},{"name":"acute rheumatic carditis","type":"related"},{"name":"acute rheumatic fever with heart involvement","type":"related"},{"name":"acute rheumatic heart disease","type":"exact"}],"termid":"MONDO:0021777","xrefs":{"Monarch":{"xref_id":"0021777"}}}


id: MONDO:0022993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus caused by excessive intake of water due to psychological factors or damage to the thirst-regulating mechanism.","definition_xrefs":["NCIT:C129735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes insipidus","termid":"MONDO:0004782"},{"relation_name":"is_a","term_name":"primary polydipsia","termid":"MONDO:0040870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"dipsogenic diabetes insipidus","secondary_identifiers":["UMLS:C0268813","MEDGEN:82829","MESH:C548013","DOID:0081058","SCTID:82800008"],"synonyms":[{"name":"Dipsogenic diabetes insipidus","type":"exact"},{"name":"dipsogenic diabetes insipidus","type":"exact"},{"name":"primary polydipsia","type":"broad"}],"termid":"MONDO:0022993","xrefs":{"Monarch":{"xref_id":"0022993"}}}


id: GO:0009718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of anthocyanins, any member of a group of intensely colored soluble glycosides of anthocyanidins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"},{"relation_name":"is_a","term_name":"anthocyanin-containing compound metabolic process","termid":"GO:0046283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anthocyanin-containing compound biosynthetic process","synonyms":[{"name":"anthocyanin anabolism","type":"exact"},{"name":"anthocyanin biosynthesis","type":"exact"},{"name":"anthocyanin biosynthetic process","type":"exact"},{"name":"anthocyanin formation","type":"exact"},{"name":"anthocyanin synthesis","type":"exact"}],"termid":"GO:0009718"}


id: MONDO:0958098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the inferior vena cava","termid":"MONDO:0019830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary inferior vena cava aneurysm","secondary_identifiers":["MEDGEN:1863758","Orphanet:652678","UMLS:C5925120"],"termid":"MONDO:0958098","xrefs":{"Monarch":{"xref_id":"0958098"}}}


id: PR:O60063
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nam9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S4-like, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.01c","synonyms":[{"name":"Spom972h-nam9","type":"exact"}],"termid":"PR:O60063"}


id: GO:0034530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-hydroxymethylsalicylaldehyde + NAD+ + H2O = 4-hydroxymethylsalicylate + NADH + 2 H+.","definition_xrefs":["UM-BBD_reactionID:r0767"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-hydroxymethylsalicyaldehyde dehydrogenase activity (obsolete GO:0034530)","termid":"GO:0034530"}


id: MONDO:0017379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyneuropathy-intellectual disability-acromicria-premature menopause syndrome is a rare genetic syndromic intellectual disability characterized by intellectual disability, polyneuropathy, short stature and short limbs, brachydactyly, and premature ovarian insufficiency. Only one familial case with three affected females was described and there have been no further descriptions in the literature since 1971.","definition_xrefs":["Orphanet:2928"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy-intellectual disability-acromicria-premature menopause syndrome","secondary_identifiers":["GARD:4424","MEDGEN:1665486","UMLS:C4749397"],"synonyms":[{"name":"Lundberg syndrome","type":"exact"},{"name":"polyneuropathy - intellectual deficit - acromicria - premature menopause","type":"related"},{"name":"polyneuropathy intellectual disability acromicria premature menopause","type":"related"},{"name":"polyneuropathy mental retardation acromicria premature menopause","type":"related"}],"termid":"MONDO:0017379","xrefs":{"Monarch":{"xref_id":"0017379"}}}


id: GO:0002524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response to an exogenous environmental antigen or an endogenous antigen initiated by the adaptive immune system.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypersensitivity","secondary_identifiers":["Wikipedia:Hypersensitivity"],"synonyms":[{"name":"hypersensitivity response","type":"related"}],"termid":"GO:0002524"}


id: GO:0009058
data:
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