# terms

id: MONDO:0004238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the petrous apex.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"petrous apex meningioma","secondary_identifiers":["DOID:7482","MEDGEN:277512","UMLS:C1335396","NCIT:C5271"],"synonyms":[{"name":"meningioma of petrous apex","type":"exact"},{"name":"meningioma of petrous ridge","type":"exact"},{"name":"meningioma of the petrous apex","type":"exact"},{"name":"meningioma of the petrous ridge","type":"exact"},{"name":"petrous ridge meningioma","type":"exact"}],"termid":"MONDO:0004238","xrefs":{"Monarch":{"xref_id":"0004238"}}}


id: PBO:0030942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_microtubule_depolymerization","termid":"PBO:0030942"}


id: MONDO:0013726
data:
  {"annotated_genes":["SJAG_02384","SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85881,85882],"is_not":false,"summary":null,"term":"MONDO:0013726"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"encephalopathy due to mitochondrial and peroxisomal fission defect","termid":"MONDO:0054865"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02384":null,"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"encephalopathy, lethal, due to defective mitochondrial peroxisomal fission 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:482290","OMIM:614388","Orphanet:330050","UMLS:C3280660","GARD:17509","DOID:0070347"],"synonyms":[{"name":"DNM1L-associated encephalopathy due to peroxisomal and mitochondrial fission defect","type":"exact"},{"name":"EMPF","type":"related"},{"name":"EMPF1","type":"related"},{"name":"encephalopathy due to defective mitochondrial and peroxisomal fission 1","type":"related"},{"name":"encephalopathy, lethal, due to defective mitochondrial and peroxisomal fission","type":"related"},{"name":"encephalopathy, lethal, due to defective mitochondrial peroxisomal fission 1","type":"exact"},{"name":"lethal encephalopathy due to mitochondrial and peroxisomal fission defect","type":"exact"}],"termid":"MONDO:0013726","terms_by_termid":{"MONDO:0013726":null},"xrefs":{"Monarch":{"xref_id":"0013726"}}}


id: MONDO:0019496
data:
  {"annotated_genes":["SJAG_00260","SJAG_01895","SJAG_02398","SJAG_03163","SJAG_03920","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[87372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[87282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[85986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[86194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[87518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032771"}]},"cv_name":"mondo","definition":"Endocrine tumors, also referred to as neuroendocrine tumors (NETs), are defined by a common phenotype which is characterized by the expression of general markers (neuron specific enolase, chromogranin, synaptophysin) and hormone secretion products. These tumors may be localized in any part of the body and are generally discovered in non-specific situations, i.e. not immediately suggestive of NETs (tests for inherited predisposition to tumors or for a clinical syndrome caused by abnormal hormone secretion).","definition_xrefs":["Orphanet:877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine gland neoplasm","termid":"MONDO:0002082"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02398":null,"SJAG_03163":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"neuroendocrine neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:255046005","EFO:1001901","GARD:9316","ICD9:209-209.99","NCIT:C3809","UMLS:C0206754","NCIT:C188218","ICD9:209","MESH:D018358","MEDGEN:64652","DOID:169","ICD9:239.7"],"synonyms":[{"name":"APUDoma","type":"exact"},{"name":"neuroendocrine neoplasm","type":"exact"},{"name":"neuroendocrine tumor","type":"exact"},{"name":"neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0019496","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008192":null,"MONDO:0011121":null,"MONDO:0011544":null,"MONDO:0013602":null,"MONDO:0032771":null},"xrefs":{"Monarch":{"xref_id":"0019496"}}}


id: PBO:0088326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, MADS-box Map1","termid":"PBO:0088326"}


id: GO:1903753
data:
  {"annotated_genes":["SJAG_03185","SJAG_02013","SJAG_02000","SJAG_05000","SJAG_04825","SJAG_03893"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92003,95372,96304,99765,117379,118618],"is_not":false,"summary":null,"term":"GO:1903753"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of p38MAPK cascade.","definition_xrefs":["PMID:18681888","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of p38MAPK cascade","termid":"GO:1900744"},{"relation_name":"negatively_regulates","term_name":"p38MAPK cascade","termid":"GO:0038066"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02000":null,"SJAG_02013":null,"SJAG_03185":null,"SJAG_03893":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of p38MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of p38 MAPK cascade","type":"exact"},{"name":"down regulation of p38 cascade","type":"exact"},{"name":"down regulation of p38MAPK cascade","type":"exact"},{"name":"down-regulation of p38 MAPK cascade","type":"exact"},{"name":"down-regulation of p38 cascade","type":"exact"},{"name":"down-regulation of p38MAPK cascade","type":"exact"},{"name":"downregulation of p38 MAPK cascade","type":"exact"},{"name":"downregulation of p38 cascade","type":"exact"},{"name":"downregulation of p38MAPK cascade","type":"exact"},{"name":"inhibition of p38 MAPK cascade","type":"narrow"},{"name":"inhibition of p38 cascade","type":"narrow"},{"name":"inhibition of p38MAPK cascade","type":"narrow"},{"name":"negative regulation of osmosensory signaling MAPK cascade","type":"narrow"},{"name":"negative regulation of p38 MAPK cascade","type":"exact"},{"name":"negative regulation of p38 cascade","type":"exact"}],"termid":"GO:1903753","terms_by_termid":{"GO:1903753":null}}


id: FYPO:0000614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through S phase of the mitotic cell cycle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic S phase progression","termid":"FYPO:0000610"},{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of mitotic S phase","secondary_identifiers":["FYPO:0000612","FYPO:0000613"],"synonyms":[{"name":"decreased rate of mitotic S phase progression","type":"related"},{"name":"delayed mitotic S phase progression","type":"related"},{"name":"delayed mitotic S phase progression during vegetative growth","type":"related"},{"name":"increased S phase index","type":"related"},{"name":"increased duration of S phase during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitotic S phase during vegetative growth","type":"exact"},{"name":"mitotic cell cycle progression in S phase: decreased rate","type":"related"},{"name":"mitotic cell cycle progression in S phase: delayed","type":"related"},{"name":"mitotic cell cycle progression in S phase: increased duration","type":"related"},{"name":"prolonged mitotic S phase","type":"exact"},{"name":"reduced rate of mitotic S phase progression","type":"related"}],"termid":"FYPO:0000614"}


id: GO:0031222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arabinan, a polysaccharide composed of arabinose residues.","definition_xrefs":["GOC:mlg","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"arabinan metabolic process","termid":"GO:0031221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"arabinan catabolic process","synonyms":[{"name":"arabinan breakdown","type":"exact"},{"name":"arabinan catabolism","type":"exact"},{"name":"arabinan degradation","type":"exact"}],"termid":"GO:0031222"}


id: PBO:0073808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 13","termid":"PBO:0073808"}


id: PBO:0050569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"harakiri, BCL2 interacting protein","termid":"PBO:0050569"}


id: MOD:00553
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a (2-sulfanylethyl)sulfanyl (or thioethylthiol) group for a hydroxy group.","definition_xrefs":["Unimod:200","PubMed:11507762","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,2-ethanedithiol modified residue","synonyms":[{"name":"1,2-ethanedithiol (EDT)","type":"exact"},{"name":"EDT","type":"related"},{"name":"Ethanedithiol","type":"related"}],"termid":"MOD:00553"}


id: GO:1902761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chondrocyte development.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:16575901","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of chondrocyte differentiation","termid":"GO:0032332"},{"relation_name":"is_a","term_name":"regulation of chondrocyte development","termid":"GO:0061181"},{"relation_name":"positively_regulates","term_name":"chondrocyte development","termid":"GO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chondrocyte development","synonyms":[{"name":"activation of chondrocyte development","type":"narrow"},{"name":"up regulation of chondrocyte development","type":"exact"},{"name":"up-regulation of chondrocyte development","type":"exact"},{"name":"upregulation of chondrocyte development","type":"exact"}],"termid":"GO:1902761"}


id: GO:0043512
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Heterodimeric hormone composed of an inhibin alpha subunit complexed with an inhibin beta-A subunit.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibin complex","termid":"GO:0043511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"inhibin A complex","termid":"GO:0043512"}


id: GO:1902270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which (R)-carnitine is transported across a membrane.","definition_xrefs":["PMID:23755272","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(R)-carnitine transport","termid":"GO:1900749"},{"relation_name":"is_a","term_name":"carnitine transmembrane transport","termid":"GO:1902603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"(R)-carnitine transmembrane transport","termid":"GO:1902270"}


id: GO:0031514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium which may have a variable arrangement of axonemal microtubules and also contains molecular motors. It may beat with a whip-like pattern that promotes cell motility or transport of fluids and other cells across a cell surface, such as on epithelial cells that line the lumenal ducts of various tissues; or they may display a distinct twirling motion that directs fluid flow asymmetrically across the cellular surface to affect asymmetric body plan organization. Motile cilia can be found in single as well as multiple copies per cell.","definition_xrefs":["GOC:kmv","PMID:17009929","PMID:20144998","PMID:22118931","GOC:dgh","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"motile cilium","secondary_identifiers":["GO:0009434","GO:0031512"],"synonyms":[{"name":"microtubule-based flagellum","type":"related"},{"name":"motile cilia","type":"exact"},{"name":"motile primary cilia","type":"related"},{"name":"motile primary cilium","type":"related"},{"name":"motile secondary cilium","type":"related"},{"name":"nodal cilium","type":"related"}],"termid":"GO:0031514"}


id: GO:0061125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of a chlorinated alkylphenone. An alkylphenone is an aromatic polyketide with methyl and chlorine substitutions.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061119"},{"relation_name":"is_a","term_name":"negative regulation of positive chemotaxis to cAMP","termid":"GO:0061123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061125"}


id: PBO:0090555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex regulatory subunit Nat1","termid":"PBO:0090555"}


id: PBO:0003249
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.12","termid":"PBO:0003249"}


id: PBO:0061824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 14 Y-linked","termid":"PBO:0061824"}


id: PBO:0069953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1246, pseudogene","termid":"PBO:0069953"}


id: MONDO:0019326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"phakomatosis pigmentovascularis","termid":"MONDO:0017318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"phakomatosis cesiomarmorata","secondary_identifiers":["SCTID:703286006","MEDGEN:825141","UMLS:C3839296","Orphanet:79484","GARD:19024","ICD9:759.6"],"synonyms":[{"name":"phakomatosis caesiomarmorata","type":"exact"},{"name":"phakomatosis cesiomarmorata","type":"exact"},{"name":"phakomatosis pigmentovascularis type 5","type":"exact"}],"termid":"MONDO:0019326","xrefs":{"Monarch":{"xref_id":"0019326"}}}


id: MONDO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"diabetic cataract","secondary_identifiers":["UMLS:C0011876","icd11.foundation:340836242","SCTID:43959009","ICD9:366.41","MEDGEN:507634","DOID:13328"],"synonyms":[{"name":"cataract - diabetic","type":"exact"}],"termid":"MONDO:0001687","xrefs":{"Monarch":{"xref_id":"0001687"}}}


id: PBO:0088699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Pet117","termid":"PBO:0088699"}


id: PBO:0004371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex large subunit Nuc1","termid":"PBO:0004371"}


id: PBO:0057946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3670-2","termid":"PBO:0057946"}


id: GO:0097484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single dendrite involved in cellular development.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection extension","termid":"GO:1990138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite extension","termid":"GO:0097484"}


id: PBO:0009640
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.83","termid":"PBO:0009640"}


id: PBO:0053006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal associated membrane protein 1 pseudogene 1","termid":"PBO:0053006"}


id: GO:0031084
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for the biogenesis of specialized organelles of the endosomal-lysosomal system, such as melanosomes and platelet dense granules. The human complex contains the Hps3, Hps5, and Hps6 proteins; the mouse complex contains ru2 and ru.","definition_xrefs":["PMID:15031569","PMID:12548288","PMID:14718540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BLOC complex","termid":"GO:0031082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BLOC-2 complex","termid":"GO:0031084"}


id: GO:0016942
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of proteins which includes the insulin-like growth factor (IGF) and a number of IGF-binding proteins. The complex plays a role in growth and development.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor complex","termid":"GO:0036454"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"insulin-like growth factor binding protein complex","synonyms":[{"name":"IGF binding protein complex","type":"exact"}],"termid":"GO:0016942"}


id: FYPO:0003430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer microtubules than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002399","FYPO:0001320","FYPO:0000054"],"is_obsolete":false,"name":"microtubules present in decreased numbers","synonyms":[{"name":"decreased level of MTs","type":"exact"},{"name":"microtubules present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"microtubules present in decreased numbers during vegetative growth","type":"exact"},{"name":"microtubules present in reduced numbers","type":"exact"}],"termid":"FYPO:0003430"}


id: GO:1904674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of somatic stem cell population maintenance.","definition_xrefs":["GOC:rph","GOC:BHF","GO_REF:0000058","GOC:TermGenie","GOC:BHF_miRNA","PMID:19409607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of stem cell population maintenance","termid":"GO:1902459"},{"relation_name":"is_a","term_name":"regulation of somatic stem cell population maintenance","termid":"GO:1904672"},{"relation_name":"positively_regulates","term_name":"somatic stem cell population maintenance","termid":"GO:0035019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of somatic stem cell population maintenance","synonyms":[{"name":"activation of somatic stem cell population maintenance","type":"narrow"},{"name":"up regulation of somatic stem cell population maintenance","type":"exact"},{"name":"up-regulation of somatic stem cell population maintenance","type":"exact"},{"name":"upregulation of somatic stem cell population maintenance","type":"exact"}],"termid":"GO:1904674"}


id: PBO:0089163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial (2Fe-2S) cluster assembly chaperone Ssc1","termid":"PBO:0089163"}


id: PBO:0004021
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mads BoX protein","termid":"PBO:0004021"}


id: PBO:0051312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-6 (pseudogene)","termid":"PBO:0051312"}


id: PBO:0044502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich tail 1","termid":"PBO:0044502"}


id: MONDO:0031040
data:
  {"annotated_genes":["SJAG_05194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86229],"is_not":false,"summary":null,"term":"MONDO:0031040"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0005066"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1824084","UMLS:C5774311","OMIM:620010"],"synonyms":[{"name":"PFIC12","type":"exact"},{"name":"cholestasis, isolated low-ggt","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 12","type":"exact"}],"termid":"MONDO:0031040","terms_by_termid":{"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0031040"}}}


id: FYPO:0005269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein kinase activity during cellular response to H2O2","type":"exact"},{"name":"reduced protein kinase activity during cellular response to H2O2","type":"exact"},{"name":"reduced protein kinase activity during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0005269"}


id: SO:0000515
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7 nucleotide recombination site (e.g. CACAGTG), part of a J-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000561"},{"relation_name":"part_of","term_name":"J_gene_recombination_feature","termid":"SO:0000302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_heptamer","synonyms":[{"name":"J heptamer","type":"exact"},{"name":"J-HEPTAMER","type":"exact"}],"termid":"SO:0000515"}


id: MONDO:0002402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm characterized by then presence of atypical giant cells.","definition_xrefs":["NCIT:C4090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"giant cell tumor","termid":"MONDO:0002171"},{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant giant cell tumor","secondary_identifiers":["DOID:2705","UMLS:C0334229","MEDGEN:90745","ICDO:8003/3"],"synonyms":[{"name":"giant cell tumor, malignant","type":"exact"},{"name":"malignant giant cell neoplasm","type":"exact"},{"name":"malignant giant cell tumor","type":"exact"},{"name":"malignant tumor, giant cell type","type":"exact"},{"name":"malignant tumor, giant cell type (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002402","xrefs":{"Monarch":{"xref_id":"0002402"}}}


id: GO:0035507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of myosin-light-chain-phosphatase activity.","definition_xrefs":["GOC:bf","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of myosin-light-chain-phosphatase activity (obsolete GO:0035507)","termid":"GO:0035507"}


id: PBO:0060098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 45","termid":"PBO:0060098"}


id: GO:0015024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 2-sulfate groups of the 2-O-sulfo-D-glucuronate residues of chondroitin sulfate, heparin and heparitin sulfate.","definition_xrefs":["EC:3.1.6.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glucuronate-2-sulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.18-RXN"],"synonyms":[{"name":"chondro-2-sulfatase activity","type":"related"},{"name":"glucuronate-2-sulphatase activity","type":"exact"},{"name":"glucurono-2-sulfatase activity","type":"related"},{"name":"polysaccharide-2-O-sulfo-D-glucuronate 2-sulfohydrolase activity","type":"related"}],"termid":"GO:0015024"}


id: PATO:0001928
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of a local accumulation of fluid underneath the surface of the bearer.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blistered","synonyms":[{"name":"blistering","type":"narrow"}],"termid":"PATO:0001928"}


id: MONDO:0017912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked pure spastic paraplegia (obsolete MONDO:0017912)","secondary_identifiers":["Orphanet:320332"],"termid":"MONDO:0017912","xrefs":{"Monarch":{"xref_id":"0017912"}}}


id: PBO:0110465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 5","termid":"PBO:0110465"}


id: GO:1900412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of histone methylation.","definition_xrefs":["GOC:TermGenie","PMID:15218150","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone methylation by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900412)","termid":"GO:1900412"}


id: GO:0035297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that the Malpighian tubule is the correct width. Malpighian tubules have a uniform circumference along their length; the circumference of the tubes is eight cells during the time the cells are dividing, after which the cells rearrange producing tubes with a cirumference of two cells.","definition_xrefs":["PMID:9286684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tube diameter","termid":"GO:0035296"},{"relation_name":"is_a","term_name":"regulation of Malpighian tubule size","termid":"GO:0035298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Malpighian tubule diameter","termid":"GO:0035297"}


id: GO:0015950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a purine nucleotide is synthesized from another purine nucleotide.","definition_xrefs":["ISBN:0306444747","ISBN:0471394831","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule interconversion","termid":"GO:0015949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine nucleotide interconversion","termid":"GO:0015950"}


id: MONDO:0021201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting the skin, caused by bacteria, viruses, parasites, or fungi. Examples of bacterial infection include carbuncles, furuncles, impetigo, erysipelas, and abscesses. Examples of viral infection include shingles, warts, molluscum contagiosum, and pityriasis rosea. Examples of parasitic infection include scabies and lice. Examples of fungal infection include athlete's foot, yeast infection, and ringworm.","definition_xrefs":["NCIT:C35025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin infection","secondary_identifiers":["UMLS:C0037278","MEDGEN:52365","SCTID:19824006"],"synonyms":[{"name":"skin infection","type":"exact"}],"termid":"MONDO:0021201","xrefs":{"Monarch":{"xref_id":"0021201"}}}


id: PBO:0027256
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level","termid":"PBO:0027256"}


id: PBO:0072528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 57","termid":"PBO:0072528"}


id: PBO:0050939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 10","termid":"PBO:0050939"}


id: PBO:0088942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) ATPase subunit Get3","termid":"PBO:0088942"}


id: GO:0061771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caloric restriction, insufficient food energy intake.","definition_xrefs":["GOC:dph","PMID:15520862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to caloric restriction","termid":"GO:0061771"}


id: MONDO:0007614
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010912"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular motility disease","termid":"MONDO:0001584"},{"relation_name":"is_a","term_name":"myopathy of extraocular muscle","termid":"MONDO:0004746"},{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital fibrosis of extraocular muscles","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080143","icd11.foundation:887449084","UMLS:C1302995","ICD9:728.2","MEDGEN:724506","Orphanet:45358","GARD:12590","NORD:997","OMIMPS:135700","SCTID:400946004"],"synonyms":[{"name":"CFEOM1","type":"related"},{"name":"Congenital Fibrosis of the Extraocular Muscles","type":"exact"},{"name":"FEOM","type":"exact"},{"name":"Feom1 locus","type":"related"},{"name":"Tukel syndrome","type":"narrow"},{"name":"blepharoptosis with absent eye movements","type":"related"},{"name":"congenital fibrosis of the extraocular muscles","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 1","type":"related"},{"name":"fibrosis of extraocular muscles, congenital, 3B","type":"related"},{"name":"fibrosis of extraocular muscles, congenital, type 1","type":"exact"},{"name":"ophthalmoplegia, congenital","type":"related"}],"termid":"MONDO:0007614","terms_by_termid":{"MONDO:0010912":null},"xrefs":{"Monarch":{"xref_id":"0007614"}}}


id: MONDO:0008213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental anomaly in which the lower sternum is posteriorly dislocated and concavely deformed, resulting in a funnel-shaped thorax.","definition_xrefs":["MESH:D005660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pectus excavatum","secondary_identifiers":["icd11.foundation:9248522","MEDGEN:781174","UMLS:C2051831","ICD9:754.81","HP:0000767","OMIM:169300","SCTID:391987005"],"synonyms":[{"name":"funnel chest","type":"related"},{"name":"pectus excavatum","type":"exact"},{"name":"pectus excavatum (disease)","type":"exact"}],"termid":"MONDO:0008213","xrefs":{"Monarch":{"xref_id":"0008213"}}}


id: PBO:0053577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 598","termid":"PBO:0053577"}


id: PBO:0049797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperpolarization activated cyclic nucleotide gated potassium channel 3","termid":"PBO:0049797"}


id: PBO:0029056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-large_vacuoles_present_in_decreased_numbers_during_vegetative_growth","termid":"PBO:0029056"}


id: MONDO:0023249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatoid arthritis","termid":"MONDO:0008383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"polyarticular juvenile rheumatoid arthritis","secondary_identifiers":["MEDGEN:551885","SCTID:445479007","UMLS:C0311221"],"synonyms":[{"name":"Juvenile polyarthritis rheumatoid factor negative","type":"related"},{"name":"Juvenile polyarthritis rheumatoid factor positive","type":"related"},{"name":"Polyarticular juvenile rheumatoid arthritis","type":"related"}],"termid":"MONDO:0023249","xrefs":{"Monarch":{"xref_id":"0023249"}}}


id: GO:0004782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-sulfino-L-alanine = hypotaurine + CO2.","definition_xrefs":["EC:4.1.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"sulfinoalanine decarboxylase activity","secondary_identifiers":["RHEA:16877","MetaCyc:SULFINOALANINE-DECARBOXYLASE-RXN","Reactome:R-HSA-1655443"],"synonyms":[{"name":"3-sulfino-L-alanine carboxy-lyase (hypotaurine-forming)","type":"related"},{"name":"3-sulfino-L-alanine carboxy-lyase activity","type":"related"},{"name":"CADCase/CSADCase activity","type":"related"},{"name":"CSAD","type":"related"},{"name":"CSADCase activity","type":"related"},{"name":"L-cysteinesulfinic acid decarboxylase activity","type":"related"},{"name":"cysteic decarboxylase activity","type":"related"},{"name":"cysteine-sulfinate decarboxylase activity","type":"related"},{"name":"cysteinesulfinate decarboxylase activity","type":"related"},{"name":"cysteinesulfinic acid decarboxylase activity","type":"related"},{"name":"sulfoalanine decarboxylase activity","type":"related"},{"name":"sulphinoalanine decarboxylase activity","type":"exact"}],"termid":"GO:0004782"}


id: MONDO:0004981
data:
  {"annotated_genes":["SJAG_02757","SJAG_00228"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014340"},{"annotations":[87365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015001"}]},"cv_name":"mondo","definition":"A disorder characterized by an electrocardiographic finding of a supraventricular arrhythmia characterized by the replacement of consistent P waves by rapid oscillations or fibrillatory waves that vary in size, shape and timing and are accompanied by an irregular ventricular response. (CDISC)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_02757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:427.31","MEDGEN:445","UMLS:C0004238","NANDO:2100051","icd11.foundation:171698302","DOID:0060224","SCTID:49436004","NCIT:C50466","HP:0005110","EFO:0000275","MESH:D001281","NANDO:2200226"],"synonyms":[{"name":"A-fib","type":"exact"},{"name":"AF","type":"exact"},{"name":"AFib","type":"exact"},{"name":"atrial fibrillation","type":"exact"},{"name":"atrial fibrillation (disease)","type":"exact"}],"termid":"MONDO:0004981","terms_by_termid":{"MONDO:0014340":null,"MONDO:0015001":null},"xrefs":{"Monarch":{"xref_id":"0004981"}}}


id: PBO:0089205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin Pex32","termid":"PBO:0089205"}


id: PBO:0068715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 4, pseudogene","termid":"PBO:0068715"}


id: MONDO:0010003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rowley-Rosenberg syndrome","secondary_identifiers":["SCTID:53783003","MEDGEN:120638","UMLS:C0268426","OMIM:268500","MESH:C535874"],"synonyms":[{"name":"Growth retardation, pulmonary hypertension, and amino aciduria","type":"related"},{"name":"Growth retardation, pulmonary hypertension, and aminoaciduria","type":"related"},{"name":"Rowley-Rosenberg syndrome","type":"exact"}],"termid":"MONDO:0010003","xrefs":{"Monarch":{"xref_id":"0010003"}}}


id: FYPO:0003448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, is shaped in the form of a spheroid, has a larger volume than normal, and in which vacuoles are more visible (usually by microscopy) than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"viable swollen spheroid vegetative cell","termid":"FYPO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"viable swollen vacuolated spheroid vegetative cell","synonyms":[{"name":"viable enlarged vacuolated spheroid vegetative cell","type":"related"},{"name":"viable enlarged volume vacuolated spheroid vegetative cell","type":"exact"},{"name":"viable large vacuolated spheroid vegetative cell","type":"related"},{"name":"viable swollen rounded vacuolated vegetative cell","type":"exact"},{"name":"viable swollen vacuolated spheroid cell during vegetative growth","type":"exact"},{"name":"viable swollen vacuolated spheroid vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003448"}


id: FYPO:0000014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which the cell tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"tapered cell","synonyms":[{"name":"bottle-shaped cell","type":"exact"},{"name":"cell morphology, bottle/skittle","type":"exact"},{"name":"skittle-shaped cell","type":"exact"}],"termid":"FYPO:0000014"}


id: PBO:0030449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_phosphatase_activity","termid":"PBO:0030449"}


id: FYPO:0003139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype that results in the formation of an ascus that contains spore-like bodies that do not contain nuclei.","definition_xrefs":["PMID:8203159","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000121","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus containing anucleate spores","synonyms":[{"name":"abnormal ascospore formation resulting in formation ascus containing anucleate spores","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci containing anucleate spores","type":"related"}],"termid":"FYPO:0003139"}


id: GO:0062054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a fluoride ion through a transmembrane aqueous pore or channel.","definition_xrefs":["PMID:23991286","PMID:25156118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"},{"relation_name":"is_a","term_name":"fluoride transmembrane transporter activity","termid":"GO:1903425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"fluoride channel activity","termid":"GO:0062054"}


id: PBO:0060186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 5B, oligomeric mucus/gel-forming","termid":"PBO:0060186"}


id: PBO:0088071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease; specifically disassembles unanchored ubiquitin chains; involved in fructose-1,6-bisphosphatase (Fbp1p) degradation; similar to human isopeptidase T","termid":"PBO:0088071"}


id: PBO:0068191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 498","termid":"PBO:0068191"}


id: FYPO:0000961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sorbitol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on sorbitol","synonyms":[{"name":"normal cell population growth in presence of sorbitol","type":"exact"},{"name":"normal cell population growth on glucitol","type":"exact"},{"name":"normal cell population growth on sorbitol","type":"exact"},{"name":"normal cellular response to sorbitol","type":"related"},{"name":"normal vegetative cell population growth on sorbitol","type":"exact"}],"termid":"FYPO:0000961"}


id: GO:0035342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of inosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of purine nucleoside transport","termid":"GO:0032248"},{"relation_name":"is_a","term_name":"regulation of inosine transport","termid":"GO:0035341"},{"relation_name":"positively_regulates","term_name":"inosine transport","termid":"GO:0035340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of inosine transport","synonyms":[{"name":"positive regulation of hypoxanthine riboside transport","type":"exact"}],"termid":"GO:0035342"}


id: PR:Q9UUJ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01984","PANTHER:PTHR11937:SF37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11H11.06","secondary_identifiers":["UniProtKB:Q9UUJ1"],"synonyms":[{"name":"Spom972h-ACTR2","type":"exact"},{"name":"actin-like protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUJ1"}


id: FYPO:0006290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during S phase of the mitotic cell cycle and during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during cellular response to hydroxyurea","termid":"FYPO:0002099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during mitotic S phase during cellular response to hydroxyurea","synonyms":[{"name":"normal protein phosphorylation during S phase during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006290"}


id: GO:0070702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner of two mucus layers secreted by epithelial cells in the colon; the inner mucus layer is firmly attached to the epithelium, is densely packed with a compact stratified appearance and is devoid of bacteria.","definition_xrefs":["GOC:mah","GOC:mm2","PMID:18806221","PMID:19432394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucus layer","termid":"GO:0070701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"inner mucus layer","termid":"GO:0070702"}


id: PBO:0091009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aminoacyl-tRNA hydrolase Pth2","termid":"PBO:0091009"}


id: MONDO:0044776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Premature ovarian failure-10 (POF10) represents a syndrome characterized by primary amenorrhea, hypergonadotropic ovarian insufficiency, and genomic instability in somatic cells.nnFor a general phenotypic description and discussion of genetic heterogeneity of premature ovarian failure, see POF1 (OMIM:311360).nnFor a discussion of genetic heterogeneity of age at natural menopause, see MENOQ1 (OMIM:300488).","definition_xrefs":["OMIM:612885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 10","secondary_identifiers":["MEDGEN:898849","UMLS:C4225402","DOID:0080867"],"synonyms":[{"name":"Pof10","type":"related"},{"name":"menopause, natural, Age At, quantitative trait locus 3","type":"related"},{"name":"premature ovarian failure 10","type":"exact"}],"termid":"MONDO:0044776","xrefs":{"Monarch":{"xref_id":"0044776"}}}


id: PBO:0074849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 38B","termid":"PBO:0074849"}


id: PBO:0005622
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homotrimer","termid":"PBO:0005622"}


id: PBO:0090501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-associated protein","termid":"PBO:0090501"}


id: PBO:0005147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(5'-nucleosidyl)-tetraphosphatase","termid":"PBO:0005147"}


id: PBO:0083282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the verified essential gene RRP14","termid":"PBO:0083282"}


id: PBO:0084188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H1, linker histone with roles in meiosis and sporulation; decreasing levels early in sporulation may promote meiosis, and increasing levels during sporulation facilitate compaction of spore chromatin; binds to promoters and within genes in mature spores; may be recruited by Ume6p to promoter regions, contributing to transcriptional repression outside of meiosis; suppresses DNA repair involving homologous recombination","termid":"PBO:0084188"}


id: MOD:00189
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to dehydroalanine.","definition_xrefs":["OMSSA:164","RESID:AA0181#SER","PubMed:2914619","PubMed:1815586","PubMed:8239649","DeltaMass:0","OMSSA:140","OMSSA:96","PubMed:10220322","PubMed:7947813","PubMed:1547888","Unimod:23#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation of an hydroxyl amino acid with prompt loss of phosphate","termid":"MOD:00416"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine (Ser)","synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dha","type":"exact"},{"name":"Dha(Ser)","type":"exact"},{"name":"MOD_RES 2,3-didehydroalanine (Ser)","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"beta-elim-s","type":"exact"},{"name":"dehydro","type":"exact"},{"name":"dehydroalanine","type":"exact"},{"name":"phospholosss","type":"exact"}],"termid":"MOD:00189"}


id: GO:0140581
data:
  {"annotated_genes":["SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108166],"is_not":false,"summary":null,"term":"GO:0140581"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu+(in) = ADP + phosphate + Cu+(out).","definition_xrefs":["RHEA:25792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transporter activity","termid":"GO:0005375"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"P-type monovalent copper transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:7.2.2.8","MetaCyc:RXN-14455"],"termid":"GO:0140581","terms_by_termid":{"GO:0140581":null}}


id: PBO:0005069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIA complex small subunit (predicted)","termid":"PBO:0005069"}


id: PBO:0074979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-21","termid":"PBO:0074979"}


id: RO:0002436
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which the two partners are molecular entities that directly physically interact with each other for example via a stable binding interaction or a brief interaction during which one modifies the other.","direct_ancestors":[{"relation_name":"is_a","term_name":"interacts_with","termid":"RO:0002434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molecularly_interacts_with","termid":"RO:0002436"}


id: MONDO:0001913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Decreased number of spermatozoa in the semen.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male infertility","termid":"MONDO:0005372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oligospermia","secondary_identifiers":["DOID:14228","MESH:D009845","icd11.foundation:1497721709","ICD9:606.1","HP:0000798","MEDGEN:18162","UMLS:C0028960"],"termid":"MONDO:0001913","xrefs":{"Monarch":{"xref_id":"0001913"}}}


id: MONDO:0015011
data:
  {"annotated_genes":["SJAG_01816"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87186],"is_not":false,"summary":null,"term":"MONDO:0015011"}]},"cv_name":"mondo","definition":"Any autosomal recessive isolated optic atrophy in which the cause of the disease is a mutation in the YME1L1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"optic atrophy 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617302","MEDGEN:934595","DOID:0111436","UMLS:C4310628","GARD:18201"],"synonyms":[{"name":"OPA11","type":"exact"},{"name":"YME1L1 autosomal recessive isolated optic atrophy","type":"exact"},{"name":"autosomal recessive isolated optic atrophy caused by mutation in YME1L1","type":"exact"},{"name":"optic atrophy 11","type":"exact"},{"name":"optic atrophy type 11","type":"exact"}],"termid":"MONDO:0015011","terms_by_termid":{"MONDO:0015011":null},"xrefs":{"Monarch":{"xref_id":"0015011"}}}


id: FYPO:0006405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the meiotic spindle pole body is broken into fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented spindle pole body","termid":"FYPO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"fragmented meiotic spindle pole body","synonyms":[{"name":"fragmented meiotic SPB","type":"exact"},{"name":"fragmented spindle pole body during meiotic cell cycle","type":"exact"},{"name":"meiotic spindle pole body fragmentation","type":"exact"}],"termid":"FYPO:0006405"}


id: PBO:0039813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 4 pseudogene 4","termid":"PBO:0039813"}


id: PBO:0061313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocystin 4","termid":"PBO:0061313"}


id: GO:0160115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The 3 protofilaments A11, A12, and A13 of the A tubule along with associated inner sheath microtuble inner proteins (MIPs), either in the lumen of the A tubule or of the B tubule, which stabilize these three filiments within the axonemal doublet microtubule. The ribbon protofilaments separate the lumens of the A and B tubules.","definition_xrefs":["PMID:29430673","PMID:1262413","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal microtubule doublet ribbon","termid":"GO:0160115"}


id: PBO:0086072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that may interact with ribosomes; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus; predicted to be involved in ribosome biogenesis","termid":"PBO:0086072"}


id: MONDO:0012532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemorrhagic telangiectasia","termid":"MONDO:0019180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"hereditary hemorrhagic telangiectasia type 4","secondary_identifiers":["GARD:10615","UMLS:C1857688","MEDGEN:341824","MESH:C565691","OMIM:610655"],"synonyms":[{"name":"HHT4","type":"related"},{"name":"telangiectasia, hereditary hemorrhagic, type 4","type":"related"}],"termid":"MONDO:0012532","xrefs":{"Monarch":{"xref_id":"0012532"}}}


id: FYPO:0007594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitophagy","termid":"FYPO:0000499"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitophagy during nitrogen starvation","synonyms":[{"name":"abolished autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"abolished autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"abolished autophagy of mitochondrion during nitrogen starvation","type":"exact"},{"name":"autophagy of mitochondrion abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007594"}


id: PR:O42855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp51 gene.","definition_xrefs":["UniProtKB:O42855","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein mrp51, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.18c","synonyms":[{"name":"Spom972h-mrp51","type":"exact"}],"termid":"PR:O42855"}


id: PBO:0057346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 541","termid":"PBO:0057346"}


id: PBO:0085553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein constituent of 66S pre-ribosomal particles; contributes to processing of the 27S pre-rRNA; recruited by ribosomal proteins L17, L35, and L37 to assembling ribosomes after 27SB pre-rRNA is generated, immediately preceding removal of ITS2","termid":"PBO:0085553"}


id: GO:0018293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a linkage between a protein amino acid and flavin-adenine dinucleotide (FAD).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-FAD linkage","termid":"GO:0018293"}


id: MONDO:0010251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 50","secondary_identifiers":["MEDGEN:376278","DOID:0112029","OMIM:300115","MESH:C564713","UMLS:C1848087","GARD:22668"],"synonyms":[{"name":"MRX50","type":"exact"},{"name":"intellectual developmental disorder, X-linked 50","type":"exact"},{"name":"intellectual disability, X-linked 50","type":"exact"},{"name":"mental retardation, X-linked 50","type":"related"}],"termid":"MONDO:0010251","xrefs":{"Monarch":{"xref_id":"0010251"}}}


id: MONDO:0008880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bowen syndrome of multiple malformations","secondary_identifiers":["Orphanet:1271","OMIM:211200","MESH:C538164","UMLS:C1859404","MEDGEN:349159"],"synonyms":[{"name":"Bowen syndrome","type":"exact"},{"name":"Bowen syndrome of multiple malformations","type":"exact"}],"termid":"MONDO:0008880","xrefs":{"Monarch":{"xref_id":"0008880"}}}


id: PR:O74516
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trm44 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (uracil-O(2)-)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.10","synonyms":[{"name":"Spom972h-trm44","type":"exact"}],"termid":"PR:O74516"}


id: GO:0060079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane potential","termid":"GO:0060078"},{"relation_name":"part_of","term_name":"chemical synaptic transmission, postsynaptic","termid":"GO:0099565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"excitatory postsynaptic potential","synonyms":[{"name":"regulation of EPSP","type":"related"},{"name":"regulation of excitatory post-synaptic membrane potential","type":"exact"}],"termid":"GO:0060079"}


id: PBO:0068496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 80, pseudogene","termid":"PBO:0068496"}


id: GO:0015668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to give double-stranded fragments with terminal 5'-phosphates. ATP hydrolysis is required. Cleavage is dependent on the presence of two copies of a specific recognition sequence in an inverse orientation in the DNA. Cleavage occurs at a specific distance from one of the recognition sites.","definition_xrefs":["EC:3.1.21.5","PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction endodeoxyribonuclease activity","termid":"GO:0015666"},{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"type III site-specific deoxyribonuclease activity","secondary_identifiers":["MetaCyc:3.1.21.5-RXN"],"synonyms":[{"name":"type III restriction enzyme activity","type":"exact"}],"termid":"GO:0015668"}


id: PBO:0054113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1478","termid":"PBO:0054113"}


id: PBO:0078316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta diversity 1","termid":"PBO:0078316"}


id: GO:0019072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The encapsulation of the viral genome within the capsid.","definition_xrefs":["ISBN:0121585336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome packaging","secondary_identifiers":["Reactome:R-HSA-168303"],"termid":"GO:0019072"}


id: PBO:0045805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDRF1 divergent transcript","termid":"PBO:0045805"}


id: FYPO:0008275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a polyphosphatase activity is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal polyphosphatase activity","termid":"FYPO:0008275"}


id: MONDO:0005290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A clinical syndrome resulting from direct or indirect muscle injury and subsequent release of myoglobin into the plasma.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete rhabdomyolysis (obsolete MONDO:0005290)","secondary_identifiers":["ICD9:728.88","MESH:D012206","SCTID:240131006","NCIT:C118318","HP:0003201"],"synonyms":[{"name":"rhabdomyolysis","type":"exact"},{"name":"rhabdomyolysis (disease)","type":"exact"}],"termid":"MONDO:0005290","xrefs":{"Monarch":{"xref_id":"0005290"}}}


id: GO:0016626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces an acceptor other than NAD, NADP, oxygen, an iron-sulfur protein, disulphide or a cytochrome.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors (obsolete GO:0016626)","synonyms":[{"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors","type":"exact"}],"termid":"GO:0016626"}


id: PBO:0063193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 6","termid":"PBO:0063193"}


id: GO:0033833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxymethylfurfural + NADH + H+ = 2,5-bis-hydroxymethylfuran + NAD+.","definition_xrefs":["GOC:jp","PMID:16652391","PMID:15338422","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hydroxymethylfurfural reductase (NADH) activity","secondary_identifiers":["MetaCyc:RXN-10738"],"termid":"GO:0033833"}


id: _global:existence_ends_during
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x existence ends during y if and only if the time point at which x ends is before or equivalent to the time point at which y ends and after or equivalent to the point at which y starts. Formally: x existence ends during y iff ω(x) <= ω(y) and ω(x) >= α(y).","direct_ancestors":[{"relation_name":"is_a","term_name":"existence_ends_during_or_before","termid":"_global:existence_ends_during_or_before"},{"relation_name":"is_a","term_name":"existence_overlaps","termid":"_global:existence_overlaps"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_during","secondary_identifiers":["RO:0002492"],"termid":"_global:existence_ends_during"}


id: PBO:0004767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-RBZ","termid":"PBO:0004767"}


id: GO:0097656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell-cell recognition process by which a cell distinguishes between self and non self during cooperative behavior, such as early development.","definition_xrefs":["GOC:pf","PMID:23910661","PMID:21700835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell recognition","termid":"GO:0009988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell self recognition","synonyms":[{"name":"kin discrimination","type":"related"},{"name":"kin recognition","type":"broad"},{"name":"self recognition","type":"broad"}],"termid":"GO:0097656"}


id: PBO:0039884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 1","termid":"PBO:0039884"}


id: PBO:0086698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localizes to the membrane fraction; possible Zap1p-regulated target gene induced by zinc deficiency; YJL132W is a non-essential gene","termid":"PBO:0086698"}


id: PBO:0005886
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein in cob intron","termid":"PBO:0005886"}


id: FYPO:0006526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiosis II","synonyms":[{"name":"abnormal second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006526"}


id: PBO:0061153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 5","termid":"PBO:0061153"}


id: MONDO:0011852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited isolated nail anomaly in which the cause of the disease is a mutation in the COL7A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 8","secondary_identifiers":["MESH:C564384","OMIM:607523","MEDGEN:375277","UMLS:C1843761","DOID:0080086"],"synonyms":[{"name":"COL7A1 inherited isolated nail anomaly","type":"exact"},{"name":"NDNC8","type":"related"},{"name":"inherited isolated nail anomaly caused by mutation in COL7A1","type":"exact"},{"name":"nail disorder, nonsyndromic congenital, 8","type":"related"},{"name":"nail disorder, nonsyndromic congenital, type 8","type":"exact"},{"name":"nonsyndromic congenital nail disorder type 8","type":"exact"},{"name":"toenail dystrophy, isolated","type":"related"}],"termid":"MONDO:0011852","xrefs":{"Monarch":{"xref_id":"0011852"}}}


id: GO:0046502
data:
  {"annotated_genes":["SJAG_05283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving uroporphyrinogen III, a precursor for synthesis of vitamin B12, chlorophyll, and heme in organisms that produce these compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0033013","GO:0008150"],"is_obsolete":false,"name":"uroporphyrinogen III metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"uroporphyrinogen III metabolism","type":"exact"}],"termid":"GO:0046502","terms_by_termid":{"GO:0006780":null}}


id: MONDO:0001620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by certain species of Rickettsia or Borrelia, which are transmitted to humans from infected lice; it is characterized by sudden fever, chills, headaches, myalgia, arthralgia, nausea, and possibly a rash. Symptoms usually persist for two to nine days, then disappear, with recurrence after several weeks if the patient remains untreated.","definition_xrefs":["NCIT:C128426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relapsing fever","termid":"MONDO:0019633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"louse-borne relapsing fever","secondary_identifiers":["ICD10CM:A68.0","ICD9:087.0","icd11.foundation:1379934125","SCTID:14683004","DOID:13035","UMLS:C0152061","MEDGEN:508863"],"synonyms":[{"name":"Relapsing fever, louse-borne","type":"exact"}],"termid":"MONDO:0001620","xrefs":{"Monarch":{"xref_id":"0001620"}}}


id: GO:0001051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a single subunit plastid RNA polymerase enzyme, which is composed of a single catalytic subunit similar to the RNA polymerase enzymes from phages T3, T7, and SP6.","definition_xrefs":["PMID:20701995","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-subunit type RNA polymerase binding","termid":"GO:0001050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"plastid single-subunit type RNA polymerase binding","termid":"GO:0001051"}


id: PR:Q9URT9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gsk31 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URT9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase gsk31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.01","synonyms":[{"name":"Spom972h-gsk31","type":"exact"}],"termid":"PR:Q9URT9"}


id: GO:0019211
data:
  {"annotated_genes":["SJAG_01270","SJAG_00078","SJAG_03793","SJAG_00095","SJAG_00369","SJAG_01142","SJAG_00526","SJAG_03353","SJAG_03681","SJAG_04638","SJAG_04968"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118877],"is_not":false,"summary":null,"term":"GO:0019211"},{"annotations":[73022,98025,93271,76793,115285,118253,74966,79269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072542"},{"annotations":[76119,72056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008160"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"phosphatase regulator activity","termid":"GO:0019208"},{"relation_name":"positively_regulates","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00095":null,"SJAG_00369":null,"SJAG_00526":null,"SJAG_01142":null,"SJAG_01270":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_03793":null,"SJAG_04638":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"positively_regulates","termid":"GO:0016788"},{"rel_name":"regulates","termid":"GO:0016788"},{"rel_name":"positively_regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"positively_regulates","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0016788","GO:0016787","GO:0003824","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"phosphatase activator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0019211","terms_by_termid":{"GO:0008160":null,"GO:0019211":null,"GO:0072542":null}}


id: PBO:0089177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase, conserved in fungi, bacteria, plants, protazoa","termid":"PBO:0089177"}


id: MONDO:0003776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm of the renal pelvis in which the epithelial cells grow downward into the underlying supportive tissue.","definition_xrefs":["NCIT:C6187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal pelvis urothelial papilloma","termid":"MONDO:0003777"},{"relation_name":"is_a","term_name":"inverted urothelial papilloma","termid":"MONDO:0021109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal pelvis inverted papilloma","secondary_identifiers":["UMLS:C1335751","MEDGEN:277591","DOID:6118"],"synonyms":[{"name":"inverted papilloma of kidney pelvis","type":"exact"},{"name":"inverted papilloma of renal pelvis","type":"exact"},{"name":"inverted papilloma of the kidney pelvis","type":"exact"},{"name":"inverted papilloma of the renal pelvis","type":"exact"},{"name":"kidney pelvis inverted papilloma","type":"exact"},{"name":"renal pelvis inverted papilloma","type":"exact"}],"termid":"MONDO:0003776","xrefs":{"Monarch":{"xref_id":"0003776"}}}


id: GO:2001310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the epipolythiodioxopiperazine gliotoxin, a poisonous substance produced by some species of fungi.","definition_xrefs":["PMID:17574915","PMID:29966253","PMID:16333108","PMID:18272357","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"gliotoxin metabolic process","termid":"GO:2001308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0006790"],"is_obsolete":false,"name":"gliotoxin biosynthetic process","synonyms":[{"name":"gliotoxin anabolism","type":"exact"},{"name":"gliotoxin biosynthesis","type":"exact"},{"name":"gliotoxin formation","type":"exact"},{"name":"gliotoxin synthesis","type":"exact"}],"termid":"GO:2001310"}


id: MONDO:0005250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammatory process that involves the chorionic villi (villitis) of the placenta.","definition_xrefs":["EFO:0003110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"disorder of extraembryonic membrane","termid":"MONDO:0045013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placental villitis","secondary_identifiers":["UMLS:C1270169","MEDGEN:693918","SCTID:388604008"],"termid":"MONDO:0005250","xrefs":{"Monarch":{"xref_id":"0005250"}}}


id: PBO:0086489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative oxidoreductase involved in late endosome to Golgi transport; physical and genetical interactions with Btn2p; null mutant is viable, has extended S phase, and sensitive to expression of top1-T722A allele; similar to human FOXRED1","termid":"PBO:0086489"}


id: GO:0019536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vibriobactin, the major siderophore produced by Vibrio cholerae.","definition_xrefs":["GOC:jl","PMID:11112537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"vibriobactin metabolic process","synonyms":[{"name":"vibriobactin metabolism","type":"exact"}],"termid":"GO:0019536"}


id: PBO:0091099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 5, Pup2","termid":"PBO:0091099"}


id: PBO:0028831
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-Mei2_nuclear_dot_absent_from_cell","termid":"PBO:0028831"}


id: PBO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in the current viewer tco1 gene is hidden behind SPNCRNA.600","termid":"PBO:0002126"}


id: MONDO:0012469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 14","secondary_identifiers":["MESH:C565202","UMLS:C1853196","MEDGEN:343990","OMIM:610320"],"synonyms":[{"name":"MYP14","type":"exact"},{"name":"myopia 14","type":"exact"}],"termid":"MONDO:0012469","xrefs":{"Monarch":{"xref_id":"0012469"}}}


id: PBO:0065645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 23","termid":"PBO:0065645"}


id: GO:0033829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-GlcNAc residue from UDP-D-GlcNAc to the fucose residue of a fucosylated protein acceptor.","definition_xrefs":["EC:2.4.1.222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1912355","Reactome:R-HSA-5096538","MetaCyc:2.4.1.222-RXN"],"synonyms":[{"name":"O-fucosylpeptide beta-1,3-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-D-GlcNAc:O-L-fucosylpeptide 3-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"}],"termid":"GO:0033829"}


id: FYPO:0000417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic cytokinesis does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000032"],"is_obsolete":false,"name":"abolished cytokinesis","synonyms":[{"name":"abolished cytokinesis during mitotic cell cycle","type":"related"},{"name":"absent cytokinesis","type":"exact"},{"name":"cytokinesis abolished","type":"exact"},{"name":"cytokinesis abolished during vegetative growth","type":"exact"},{"name":"cytokinesis: absent","type":"related"},{"name":"mitotic cytokinesis abolished","type":"exact"}],"termid":"FYPO:0000417"}


id: PBO:0072812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 8","termid":"PBO:0072812"}


id: MONDO:0017063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida aperta","termid":"MONDO:0017062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"total spina bifida aperta","secondary_identifiers":["icd11.foundation:910194123","Orphanet:268377","GARD:20952"],"termid":"MONDO:0017063","xrefs":{"Monarch":{"xref_id":"0017063"}}}


id: PBO:0050064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLF pseudogene 1","termid":"PBO:0050064"}


id: GO:0009629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gravity","synonyms":[{"name":"response to gravitational stimulus","type":"exact"}],"termid":"GO:0009629"}


id: MONDO:0004713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a gingiva of lower jaw.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingival cancer","termid":"MONDO:0005507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"lower gum cancer","secondary_identifiers":["UMLS:C0432581","DOID:9125","ICD9:143.1","MEDGEN:609602","SCTID:363384006"],"synonyms":[{"name":"cancer of gingiva of lower jaw","type":"exact"},{"name":"gingiva of lower jaw cancer","type":"exact"},{"name":"malignant gingiva of lower jaw neoplasm","type":"exact"},{"name":"malignant neoplasm of gingiva of lower jaw","type":"exact"},{"name":"malignant tumor of lower gingiva","type":"exact"},{"name":"malignant tumor of lower gum","type":"exact"},{"name":"malignant tumour of lower gingiva","type":"exact"},{"name":"malignant tumour of lower gum","type":"exact"}],"termid":"MONDO:0004713","xrefs":{"Monarch":{"xref_id":"0004713"}}}


id: GO:0009946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the proximal/distal axis. The proximal/distal axis is defined by a line that runs from main body (proximal end) of an organism outward (distal end).","definition_xrefs":["GOC:dph","GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"proximal/distal pattern formation","termid":"GO:0009954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal axis specification","synonyms":[{"name":"proximal/distal axis determination","type":"related"},{"name":"proximodistal axis specification","type":"exact"}],"termid":"GO:0009946"}


id: FYECO:0000414
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing xylose as the carbon source, yeast extract and other components. The concentration of xylose is typically around 2%.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylose YE","synonyms":[{"name":"xylose rich medium","type":"broad"}],"termid":"FYECO:0000414"}


id: PBO:0028571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleotide-excision_repair_during_vegetative_growth","termid":"PBO:0028571"}


id: FYPO:0000398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1/S transition of the mitotic cell cycle begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1/S phase transition","termid":"FYPO:0000394"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"premature mitotic G1/S phase transition","synonyms":[{"name":"advanced mitotic G1/S phase transition during vegetative growth","type":"exact"},{"name":"cell cycle progression through the G1/S phase transition: premature","type":"related"},{"name":"premature G1/S phase transition during mitotic cell cycle","type":"exact"},{"name":"premature cell cycle progression through mitotic G1/S phase transition","type":"exact"},{"name":"premature mitotic G1/S phase transition during vegetative growth","type":"exact"},{"name":"premature mitotic G1/S transition","type":"exact"}],"termid":"FYPO:0000398"}


id: PBO:0058232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4521","termid":"PBO:0058232"}


id: PBO:0058644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6773","termid":"PBO:0058644"}


id: PBO:0047186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 204 member B, pseudogene","termid":"PBO:0047186"}


id: GO:0017040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acylsphing-4-enine + H2O = a fatty acid + sphing-4-enine.","definition_xrefs":["RHEA:20856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acylsphingosine amidohydrolase activity","secondary_identifiers":["Reactome:R-HSA-1606602","Reactome:R-HSA-1606583","EC:3.5.1.23","Reactome:R-HSA-428231","MetaCyc:CERAMIDASE-RXN","Reactome:R-HSA-428205"],"synonyms":[{"name":"acylsphingosine deacylase activity","type":"related"},{"name":"ceramidase activity","type":"narrow"},{"name":"glycosphingolipid ceramide deacylase","type":"broad"}],"termid":"GO:0017040"}


id: PBO:0059654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 20","termid":"PBO:0059654"}


id: PBO:0048325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 36","termid":"PBO:0048325"}


id: PBO:0078845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 1","termid":"PBO:0078845"}


id: MONDO:0019618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon cause of hypopituitarism seen after severe postpartum hemorrhaging. Prolonged hypovolemia leads to ischemic necrosis of the pituitary. Clinical signs typically present in the puerperium and include failure to begin lactation, fatigue, hypotension and eventual amenorrhea. Clinical course is usually mild, however extreme cases may progress to adrenal failure. Prognosis is most favorable when hormone replacement is initiated soon after symptom onset.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sheehan syndrome","secondary_identifiers":["SCTID:32390006","MedDRA:10036297","ICD10CM:E23.0","MESH:D007018","icd11.foundation:421687193","NCIT:C35300","DOID:9476","MEDGEN:116569","SCTID:290653008","Orphanet:91355","GARD:7630","UMLS:C0242342"],"synonyms":[{"name":"Sheehan's syndrome","type":"exact"},{"name":"postpartum hypopituitarism","type":"exact"},{"name":"postpartum panhypopituitarism","type":"related"},{"name":"postpartum panhypopituitary syndrome","type":"related"},{"name":"postpartum pituitary necrosis","type":"related"}],"termid":"MONDO:0019618","xrefs":{"Monarch":{"xref_id":"0019618"}}}


id: PBO:0070208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 136 pseudogene","termid":"PBO:0070208"}


id: PBO:0003870
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Menkes/Wilson disease","termid":"PBO:0003870"}


id: MONDO:0009705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carnitine palmitoyltransferase 1A (CPT-1A) deficiency is an inborn error of metabolism that affects mitochondrial oxidation of long chain fatty acids (LCFA) in the liver and kidneys, and is characterized by recurrent attacks of fasting-induced hypoketotic hypoglycemia and risk of liver failure.","definition_xrefs":["Orphanet:156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carnitine cycle and carnitine transport","termid":"MONDO:0017716"},{"relation_name":"is_a","term_name":"inherited fatty acid metabolism disorder","termid":"MONDO:0037858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"carnitine palmitoyl transferase 1A deficiency","secondary_identifiers":["DOID:0090129","GARD:1120","HGNC:2328","NANDO:1200970","UMLS:C1829703","OMIM:255120","NORD:894","MEDGEN:316820","NANDO:2200509","ICD9:277.85","MESH:C535588","NCIT:C98871","SCTID:238001003"],"synonyms":[{"name":"CPT 1 deficiency","type":"related"},{"name":"CPT I deficiency","type":"exact"},{"name":"CPT deficiency, hepatic, type 1","type":"related"},{"name":"CPT1A deficiency","type":"exact"},{"name":"CPT1A disorder of carnitine cycle and carnitine transport","type":"exact"},{"name":"Carnitine Palmitoyltransferase 1 deficiency","type":"related"},{"name":"Carnitine Palmitoyltransferase 1A Deficiency","type":"exact"},{"name":"Carnitine Palmitoyltransferase 1A deficiency","type":"related"},{"name":"Carnitine palmitoyl transferase 1 deficiency","type":"related"},{"name":"Carnitine palmitoyl transferase IA deficiency","type":"exact"},{"name":"Carnitine palmitoyltransferase 1A deficiency","type":"related"},{"name":"L-CPT 1 deficiency","type":"related"},{"name":"L-CPT1 deficiency","type":"exact"},{"name":"L-CPTI deficiency","type":"exact"},{"name":"carnitine palmitoyl transferase 1A deficiency","type":"exact"},{"name":"carnitine palmitoyl transferase IA deficiency","type":"exact"},{"name":"carnitine palmitoyltransferase I deficiency","type":"exact"},{"name":"cpt deficiency, hepatic, type IA","type":"exact"},{"name":"disorder of carnitine cycle and carnitine transport caused by mutation in CPT1A","type":"exact"},{"name":"hepatic CPT deficiency type I","type":"exact"},{"name":"hepatic CPT1","type":"related"},{"name":"hepatic carnitine palmitoyl transferase 1 deficiency","type":"exact"},{"name":"hepatic carnitine palmitoyl transferase I deficiency","type":"exact"},{"name":"hepatic carnitine palmitoyltransferase 1 deficiency","type":"related"}],"termid":"MONDO:0009705","xrefs":{"Monarch":{"xref_id":"0009705"}}}


id: GO:1904255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of an iron transmembrane transporter activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:BHF","GOC:kom","PMID:15514116"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of iron ion transmembrane transporter activity (obsolete GO:1904255)","synonyms":[{"name":"down regulation of iron cation channel activity","type":"exact"},{"name":"down regulation of iron channel activity","type":"exact"},{"name":"down regulation of iron-specific channel activity","type":"exact"},{"name":"down-regulation of iron cation channel activity","type":"exact"},{"name":"down-regulation of iron channel activity","type":"exact"},{"name":"down-regulation of iron-specific channel activity","type":"exact"},{"name":"downregulation of iron cation channel activity","type":"exact"},{"name":"downregulation of iron channel activity","type":"exact"},{"name":"downregulation of iron-specific channel activity","type":"exact"},{"name":"inhibition of iron cation channel activity","type":"narrow"},{"name":"inhibition of iron channel activity","type":"narrow"},{"name":"inhibition of iron-specific channel activity","type":"narrow"},{"name":"negative regulation of iron cation channel activity","type":"exact"},{"name":"negative regulation of iron channel activity","type":"exact"},{"name":"negative regulation of iron-specific channel activity","type":"exact"}],"termid":"GO:1904255"}


id: MONDO:0018720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete common cystic lymphatic malformation (obsolete MONDO:0018720)","secondary_identifiers":["Orphanet:458833"],"termid":"MONDO:0018720","xrefs":{"Monarch":{"xref_id":"0018720"}}}


id: FYPO:0005604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which sites at which the protein Rad52 accumulates remain present for longer than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah","PMID:27098497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of Rad52 focus presence during vegetative growth","termid":"FYPO:0007191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation","synonyms":[{"name":"delayed peak level of Rad52 foci during cellular response to ionizing radiation","type":"related"},{"name":"increased duration of Rad22 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"increased persistence of Rad52 foci during cellular response to ionizing radiation","type":"exact"},{"name":"prolonged Rad52 focus presence during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005604"}


id: FYPO:0005731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arginase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal arginase activity","termid":"FYPO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased arginase activity","synonyms":[{"name":"reduced arginase activity","type":"exact"}],"termid":"FYPO:0005731"}


id: MONDO:0100119
data:
  {"annotated_genes":["SJAG_00845","SJAG_02878"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87499,87500],"is_not":false,"summary":null,"term":"MONDO:0100119"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Knobloch syndrome","termid":"MONDO:0800166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"Knobloch syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5676897","OMIM:618458","MEDGEN:1812153"],"termid":"MONDO:0100119","terms_by_termid":{"MONDO:0100119":null},"xrefs":{"Monarch":{"xref_id":"0100119"}}}


id: MONDO:0002546
data:
  {"annotated_genes":["SJAG_01111","SJAG_04213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87661,87662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A benign, usually encapsulated slow growing tumor composed of Schwann cells. It affects peripheral and cranial nerves. It recurs infrequently and only rare cases associated with malignant transformation have been reported.","definition_xrefs":["NCIT:C3269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nerve sheath neoplasm","termid":"MONDO:0002547"},{"relation_name":"is_a","term_name":"benign peripheral nerve sheath tumor","termid":"MONDO:0016752"},{"relation_name":"is_a","term_name":"low grade glioma","termid":"MONDO:0021637"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null},"genotype_count":0,"is_obsolete":false,"name":"schwannoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:955","EFO:0000693","UMLS:C0027809","MedDRA:10029234","GARD:4767","ICD9:215.9","MedDRA:10029235","MEDGEN:45053","ICDO:9560/0","DOID:3192","NANDO:2200103","ONCOTREE:SCHW","Orphanet:252164","SCTID:404022001"],"synonyms":[{"name":"SCHW","type":"related"},{"name":"benign neurilemmoma","type":"exact"},{"name":"benign schwannoma","type":"exact"},{"name":"neurilemmoma","type":"exact"},{"name":"neurinoma","type":"exact"},{"name":"neurolemmoma","type":"related"},{"name":"peripheral fibroblastoma","type":"exact"},{"name":"psammomatous schwannoma","type":"exact"},{"name":"schwannoma","type":"exact"},{"name":"schwannoma (WHO grade I)","type":"exact"},{"name":"schwannoma, benign","type":"exact"}],"termid":"MONDO:0002546","terms_by_termid":{"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0002546"}}}


id: PBO:0057829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3147 host gene","termid":"PBO:0057829"}


id: PBO:0074736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 94","termid":"PBO:0074736"}


id: MONDO:0001928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cholangitis that is characterized by pyogenic organisms.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholangitis","termid":"MONDO:0004789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"suppurative cholangitis","secondary_identifiers":["NCIT:C35336","icd11.foundation:32799822","MEDGEN:82766","UMLS:C0267924","SCTID:69850007","DOID:14269"],"synonyms":[{"name":"suppurative cholangitis","type":"exact"}],"termid":"MONDO:0001928","xrefs":{"Monarch":{"xref_id":"0001928"}}}


id: PBO:0087550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; part of TauB domain of TFIIIC that binds DNA at BoxB promoter sites of tRNA and similar genes; cooperates with Tfc6p in DNA binding; largest of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); colocalizes with condensin at pol III genes and several ETC (extra TFIIIC) sites; may have a role in recruiting or stabilizing Scc2/4 and condensin on chromosomes","termid":"PBO:0087550"}


id: MONDO:0001535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the vagus nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vagus nerve disorder","secondary_identifiers":["ICD9:352.3","SCTID:73765005","MESH:D020421","MEDGEN:101824","UMLS:C0152179","NCIT:C27591","DOID:12491"],"synonyms":[{"name":"Vagus nerve disorder","type":"exact"},{"name":"disease of vagus nerve","type":"exact"},{"name":"disease or disorder of vagus nerve","type":"exact"},{"name":"disorder of pneumogastric [10th] nerve","type":"exact"},{"name":"disorder of vagal nerve","type":"exact"},{"name":"disorder of vagus nerve","type":"exact"},{"name":"vagus nerve disease","type":"exact"},{"name":"vagus nerve disease or disorder","type":"exact"}],"termid":"MONDO:0001535","xrefs":{"Monarch":{"xref_id":"0001535"}}}


id: PBO:0050857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interactor of little elongation complex ELL subunit 2 pseudogene 2","termid":"PBO:0050857"}


id: GO:1900737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase C-activating G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:1900736"},{"relation_name":"negatively_regulates","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","synonyms":[{"name":"down regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"down regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"down regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"down regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"down regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"down-regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down-regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down-regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"down-regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down-regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down-regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"down-regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"down-regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"down-regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"downregulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"downregulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"downregulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"downregulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"downregulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"downregulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"downregulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"downregulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"downregulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"inhibition of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"inhibition of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"inhibition of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"inhibition of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"inhibition of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"inhibition of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"inhibition of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"inhibition of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"narrow"},{"name":"inhibition of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"negative regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"negative regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"negative regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"negative regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"negative regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"negative regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"negative regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"negative regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"negative regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"}],"termid":"GO:1900737"}


id: GO:0043414
data:
  {"annotated_genes":["SJAG_01261","SJAG_02821","SJAG_02377","SJAG_04367","SJAG_00325","SJAG_04453","SJAG_00255","SJAG_04181","SJAG_05249","SJAG_03008","SJAG_01958","SJAG_03289","SJAG_01269","SJAG_04649","SJAG_04034","SJAG_01375","SJAG_00722","SJAG_00943","SJAG_02281","SJAG_03713","SJAG_02350","SJAG_04848","SJAG_03877","SJAG_04735","SJAG_03410","SJAG_03773","SJAG_02042","SJAG_04680","SJAG_04890","SJAG_02352","SJAG_01314","SJAG_02386","SJAG_00886","SJAG_00499","SJAG_05334","SJAG_02024","SJAG_03016","SJAG_03901","SJAG_02417","SJAG_00744","SJAG_02302","SJAG_04736","SJAG_03332","SJAG_03367","SJAG_04993","SJAG_02099","SJAG_02637"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036261"},{"annotations":[78461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[59775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106005"},{"annotations":[80501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"},{"annotations":[76004,79314,80052,79010,78501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070475"},{"annotations":[79111,79616,59644,64498,64078,66067,75442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031167"},{"annotations":[94466,108401,99118,110508,111655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000452"},{"annotations":[67893,58953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106004"},{"annotations":[110464,107084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106217"},{"annotations":[90798,106104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002946"},{"annotations":[76264,74401,73007,95039,98398,96555,72623,63186,74050,75628,76565,72711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030488"},{"annotations":[78460,71497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002939"},{"annotations":[73669,104451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002940"},{"annotations":[115127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002128"},{"annotations":[94268,88604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"},{"annotations":[98174,103204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"The covalent attachment of a methyl residue to one or more monomeric units in a polypeptide, polynucleotide, polysaccharide, or other biological macromolecule.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylation","termid":"GO:0032259"},{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00325":null,"SJAG_00499":null,"SJAG_00722":null,"SJAG_00744":null,"SJAG_00886":null,"SJAG_00943":null,"SJAG_01261":null,"SJAG_01269":null,"SJAG_01314":null,"SJAG_01375":null,"SJAG_01958":null,"SJAG_02024":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02281":null,"SJAG_02302":null,"SJAG_02350":null,"SJAG_02352":null,"SJAG_02377":null,"SJAG_02386":null,"SJAG_02417":null,"SJAG_02637":null,"SJAG_02821":null,"SJAG_03008":null,"SJAG_03016":null,"SJAG_03289":null,"SJAG_03332":null,"SJAG_03367":null,"SJAG_03410":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03877":null,"SJAG_03901":null,"SJAG_04034":null,"SJAG_04181":null,"SJAG_04367":null,"SJAG_04453":null,"SJAG_04649":null,"SJAG_04680":null,"SJAG_04735":null,"SJAG_04736":null,"SJAG_04848":null,"SJAG_04890":null,"SJAG_04993":null,"SJAG_05249":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macromolecule methylation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0043414","terms_by_termid":{"GO:0000452":null,"GO:0002127":null,"GO:0002128":null,"GO:0002130":null,"GO:0002939":null,"GO:0002940":null,"GO:0002946":null,"GO:0030488":null,"GO:0031167":null,"GO:0036261":null,"GO:0070475":null,"GO:0070476":null,"GO:0070901":null,"GO:0106004":null,"GO:0106005":null,"GO:0106217":null}}


id: GO:0034937
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: perchlorate + 2 H+ + 2 e- = chlorate + H2O.","definition_xrefs":["UM-BBD_reactionID:r0980"],"gene_count":0,"genotype_count":0,"name":"obsolete perchlorate reductase activity (obsolete GO:0034937)","termid":"GO:0034937"}


id: GO:0051794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of timing of catagen, the regression phase of the hair cycle.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair follicle maturation","termid":"GO:0048819"},{"relation_name":"regulates","term_name":"catagen","termid":"GO:0042637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of catagen","synonyms":[{"name":"regulation of catagen","type":"related"}],"termid":"GO:0051794"}


id: FYPO:0003289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to medial cortical node","synonyms":[{"name":"abnormal protein localisation to medial cortical node","type":"exact"},{"name":"abnormal protein localization to cortical medial dot","type":"exact"},{"name":"abnormal protein localization to cytokinetic nodes","type":"related"},{"name":"abnormal protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"abnormal protein localization to medial cortical nodes","type":"exact"},{"name":"abnormal protein recruitment to medial cortical node","type":"related"}],"termid":"FYPO:0003289"}


id: PBO:0085333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylserine decarboxylase of the Golgi and vacuolar membranes; converts phosphatidylserine to phosphatidylethanolamine; controls vacuolar membrane phospholipid content by regulating phospholipids in compartments that will eventually give rise to the vacuole; loss of Psd2p causes a specific reduction in vacuolar membrane PE levels while total PE levels are not significantly affected","termid":"PBO:0085333"}


id: MONDO:0017216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Calciphylaxis cutis is a life-threatening syndrome characterized by progressive and painful skin ulcerations associated with media calcification of medium-size and small cutaneous arterial vessels. It affects mainly patients on dialysis or after renal transplantation.","definition_xrefs":["Orphanet:280065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calciphylaxis","termid":"MONDO:0017215"},{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"calciphylaxis cutis","secondary_identifiers":["GARD:21070","UMLS:C4274083","SCTID:717043006","MEDGEN:900547"],"termid":"MONDO:0017216","xrefs":{"Monarch":{"xref_id":"0017216"}}}


id: GO:0047044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + androstan-3-alpha,17-beta-diol = 17-beta-hydroxyandrostan-3-one + NADH + H+.","definition_xrefs":["RHEA:22400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"androstan-3-alpha,17-beta-diol dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:1.1.1.53-RXN","EC:1.1.1.53"],"synonyms":[{"name":"(R)-20-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"20beta-HSD","type":"related"},{"name":"20beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"3-alpha(or 20-beta)-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3alpha(or 20beta)-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3alpha(or 20beta)-hydroxysteroid:NAD+ oxidoreductase activity","type":"broad"},{"name":"3alpha,20beta-hydroxysteroid:NAD+-oxidoreductase activity","type":"broad"},{"name":"NADH-20beta-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"cortisone reductase activity","type":"related"},{"name":"dehydrogenase, 20beta-hydroxy steroid","type":"broad"},{"name":"delta4-3-ketosteroid hydrogenase activity","type":"broad"}],"termid":"GO:0047044"}


id: SO:0000339
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region in a genome which promotes recombination.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_hotspot","secondary_identifiers":["http://en.wikipedia.org/wiki/Recombination_hotspot"],"synonyms":[{"name":"recombination hotspot","type":"exact"}],"termid":"SO:0000339"}


id: PBO:0084685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial cell death effector; translocates to the nucleus in response to apoptotic stimuli; triggers apoptosis in cells lacking HXK2; homolog of mammalian Apoptosis-Inducing Factor, putative reductase","termid":"PBO:0084685"}


id: PR:O94288
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar complex protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14428:SF5","OMA:SCHPO03754","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar complex-associated protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.03c","secondary_identifiers":["UniProtKB:O94288"],"synonyms":[{"name":"Spom972h-NOC3L","type":"exact"}],"termid":"PR:O94288"}


id: PBO:0059295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L45 pseudogene 1","termid":"PBO:0059295"}


id: GO:1901534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hematopoietic progenitor cell differentiation.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"positively_regulates","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hematopoietic progenitor cell differentiation","synonyms":[{"name":"activation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"activation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"activation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"activation of hemopoietic progenitor cell differentiation","type":"narrow"},{"name":"positive regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"positive regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"positive regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"up regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"up regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"up regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"up regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"up-regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"up-regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"up-regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"up-regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"upregulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"upregulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"upregulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"upregulation of hemopoietic progenitor cell differentiation","type":"exact"}],"termid":"GO:1901534"}


id: MONDO:0020090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete male infertility due to gonadal dysgenesis (obsolete MONDO:0020090)","secondary_identifiers":["Orphanet:98313"],"synonyms":[{"name":"Male infertility due to testicular dysgenesis","type":"exact"}],"termid":"MONDO:0020090","xrefs":{"Monarch":{"xref_id":"0020090"}}}


id: PBO:0048251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin G associated kinase","termid":"PBO:0048251"}


id: PBO:0014575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor","termid":"PBO:0014575"}


id: PBO:0112610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane formation protein Mug56","termid":"PBO:0112610"}


id: PBO:0026815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_binding_specificity","termid":"PBO:0026815"}


id: PBO:0089315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex assembly protein Emi5","termid":"PBO:0089315"}


id: MONDO:0002077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"placenta praevia","termid":"MONDO:0005918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low implantation of placenta","secondary_identifiers":["MEDGEN:510322","UMLS:C0156617","SCTID:7792000","DOID:1677","ICD9:641.0"],"termid":"MONDO:0002077","xrefs":{"Monarch":{"xref_id":"0002077"}}}


id: GO:0044260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular macromolecule metabolic process (obsolete GO:0044260)","synonyms":[{"name":"cellular biopolymer metabolic process","type":"exact"},{"name":"cellular macromolecule metabolism","type":"exact"}],"termid":"GO:0044260"}


id: PBO:0059151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 3","termid":"PBO:0059151"}


id: PBO:0084434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL-activator protein; part of complex locus MAL3; nonfunctional in genomic reference strain S288C","termid":"PBO:0084434"}


id: PBO:0061811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 1 Y-linked","termid":"PBO:0061811"}


id: PBO:0043493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 2","termid":"PBO:0043493"}


id: FYECO:0000149
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 1-deoxynojirimycin (1-DNJ) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 1-DNJ","synonyms":[{"name":"1-deoxynojirimycin added","type":"exact"},{"name":"DNJ added","type":"exact"},{"name":"deoxynojirimycin added","type":"exact"}],"termid":"FYECO:0000149"}


id: PBO:0047390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 30","termid":"PBO:0047390"}


id: GO:0071445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to protein stimulus (obsolete GO:0071445)","synonyms":[{"name":"cellular response to protein stimulus","type":"exact"}],"termid":"GO:0071445"}


id: MONDO:0001600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign cyst located in the salivary gland that is lined by epithelium and filled with mucoid fluid, tissue, or other material; it is usually caused by duct obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland disorder","termid":"MONDO:0001142"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucocele of salivary gland","secondary_identifiers":["ICD10CM:K11.6","MEDGEN:10117","UMLS:C0026686","ICD9:527.6","DOID:12904","MESH:D011900","icd11.foundation:48444833","SCTID:69825009"],"synonyms":[{"name":"mucous retention cyst of salivary gland","type":"exact"},{"name":"ranula","type":"exact"},{"name":"salivary cyst","type":"exact"},{"name":"salivary gland mucocele","type":"exact"}],"termid":"MONDO:0001600","xrefs":{"Monarch":{"xref_id":"0001600"}}}


id: GO:0044072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or stops progression through the host cell cycle.","definition_xrefs":["PMID:19308257","PMID:10946289"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host cell cycle progression (obsolete GO:0044072)","synonyms":[{"name":"cell cycle arrest in host","type":"related"},{"name":"negative regulation by symbiont of host cell cycle","type":"related"},{"name":"suppression of host cell cycle progression","type":"exact"}],"termid":"GO:0044072"}


id: GO:1903270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic translational elongation through polyproline stretches.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24923804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational elongation","termid":"GO:1900247"},{"relation_name":"regulates","term_name":"cytoplasmic translational elongation through polyproline stretches","termid":"GO:0097622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of cytoplasmic translational elongation through polyproline stretches","termid":"GO:1903270"}


id: PBO:0077096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"timeless circadian regulator","termid":"PBO:0077096"}


id: GO:0047027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzyl (2R,3S)-2-methyl-3-hydroxybutanoate + NADP+ = benzyl 2-methyl-3-oxobutanoate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.217","RHEA:16405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzyl-2-methyl-hydroxybutyrate dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.217-RXN","KEGG_REACTION:R04370"],"synonyms":[{"name":"benzyl 2-methyl-3-hydroxybutyrate dehydrogenase activity","type":"related"},{"name":"benzyl-(2R,3S)-2-methyl-3-hydroxybutanoate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047027"}


id: PBO:0051120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-5 (non-functional)","termid":"PBO:0051120"}


id: PBO:0083291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame is located in promoter region of essential gene SEC31","termid":"PBO:0083291"}


id: SO:0000457
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome duplication involving an insertion from another chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_duplication","termid":"SO:1000037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interchromosomal_duplication","synonyms":[{"name":"interchromosomal duplication","type":"exact"}],"termid":"SO:0000457"}


id: PBO:0041083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRMS1 transcriptional repressor and anoikis regulator","termid":"PBO:0041083"}


id: MONDO:0009006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complement component 2 deficiency (C2D) is a genetic condition that affects the immune system. Signs and symptoms include recurrent bacterial infections and risk for a variety of autoimmune conditions. Infections can be very serious and are common in early life. They become less frequent during the teen and adult years. The most frequent autoimmune conditions associated with C2D are lupus (10-20%) and vasculitis. C2D is caused by mutations in the C2 gene and is inherited in an autosomal recessive fashion.","direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"immunodeficiency due to a classical component pathway complement deficiency","termid":"MONDO:0015699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement component 2 deficiency","secondary_identifiers":["DOID:0060295","NANDO:2200781","NCIT:C119992","GARD:1452","OMIM:217000","UMLS:C3150275","MEDGEN:461625"],"synonyms":[{"name":"C2 complement deficiency","type":"exact"},{"name":"C2 deficiency","type":"related"},{"name":"C2D","type":"related"},{"name":"complement component 2 deficiency","type":"exact"},{"name":"complement deficiency caused by mutation in C2","type":"exact"}],"termid":"MONDO:0009006","xrefs":{"Monarch":{"xref_id":"0009006"}}}


id: PBO:0059208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoregulin","termid":"PBO:0059208"}


id: GO:0047365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + quercetin 3-sulfate = adenosine 3',5'-diphosphate + H+ + quercetin 3,3'-disulfate.","definition_xrefs":["RHEA:22504","EC:2.8.2.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"quercetin-3-sulfate 3'-sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R02632","MetaCyc:2.8.2.26-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin-3-sulfate 3'-sulfotransferase activity","type":"related"},{"name":"3'-sulfotransferase activity","type":"related"},{"name":"PAPS:flavonol 3-sulfate 3'-sulfotransferase activity","type":"related"},{"name":"flavonol 3'-sulfotransferase activity","type":"related"},{"name":"quercetin-3-sulphate 3'-sulphotransferase activity","type":"exact"}],"termid":"GO:0047365"}


id: MOD:01957
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 2-hydroxyproline.","definition_xrefs":["ChEBI:141809","RESID:AA0602","PubMed:23385463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated proline","termid":"MOD:01024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyproline","synonyms":[{"name":"(2R)-2-hydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"2-hydroxyproline","type":"exact"},{"name":"2-oxidanylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"MOD_RES 2-hydroxyproline","type":"exact"},{"name":"alpha-hydroxyproline","type":"exact"}],"termid":"MOD:01957"}


id: PBO:0068956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 200, pseudogene","termid":"PBO:0068956"}


id: GO:0010745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process in which a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:add","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage derived foam cell differentiation","termid":"GO:0010743"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"negatively_regulates","term_name":"macrophage derived foam cell differentiation","termid":"GO:0010742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage derived foam cell differentiation","termid":"GO:0010745"}


id: PBO:0044625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublecortin domain containing 2C","termid":"PBO:0044625"}


id: PBO:0005079
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.-.-","termid":"PBO:0005079"}


id: GO:0004611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphate + oxaloacetate = phosphoenolpyruvate + CO2 + other reaction products.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase activity","synonyms":[{"name":"PEP carboxykinase activity","type":"related"},{"name":"PEPCK activity","type":"related"},{"name":"phosphopyruvate carboxylase activity","type":"related"}],"termid":"GO:0004611"}


id: GO:0018160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent binding of a pyrromethane (dipyrrin) cofactor to protein via the sulfur atom of cysteine forming dipyrrolylmethanemethyl-L-cysteine.","definition_xrefs":["RESID:AA0252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-pyrromethane cofactor linkage","secondary_identifiers":["GO:0033035","GO:0018354"],"synonyms":[{"name":"dipyrromethane cofactor binding","type":"related"},{"name":"peptidyl-pyrromethane cofactor linkage via dipyrrolylmethanemethyl-L-cysteine","type":"exact"}],"termid":"GO:0018160"}


id: GO:0031309
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of nuclear outer membrane (obsolete GO:0031309)","synonyms":[{"name":"integral to nuclear outer membrane","type":"narrow"}],"termid":"GO:0031309"}


id: PBO:0031361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_thiabendazole","termid":"PBO:0031361"}


id: SO:0002177
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A duplication that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_artifact","termid":"SO:0002175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplication_artifact","synonyms":[{"name":"duplication artifact","type":"exact"}],"termid":"SO:0002177"}


id: GO:0009600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a nematode is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of nematode","synonyms":[{"name":"perception of nematode","type":"related"}],"termid":"GO:0009600"}


id: MONDO:1010472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent truncus arteriosus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"persistent truncus arteriosus, non-human animal","termid":"MONDO:1010018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent truncus arteriosus, domestic cat","secondary_identifiers":["OMIA:000795-9685"],"termid":"MONDO:1010472","xrefs":{"Monarch":{"xref_id":"1010472"}}}


id: FYECO:0000194
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which biotin was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited biotin","termid":"FYECO:0000194"}


id: PBO:0069937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1230, pseudogene","termid":"PBO:0069937"}


id: GO:0048213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The binding of specific proteins to the t-SNARE/v-SNARE/SNAP25 complex, by which the Golgi vesicle prefusion complex is stabilized.","definition_xrefs":["ISBN:0716731363","GOC:jid","PMID:10219233"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi vesicle prefusion complex stabilization (obsolete GO:0048213)","synonyms":[{"name":"Golgi vesicle prefusion complex assembly","type":"exact"},{"name":"Golgi-derived vesicle prefusion complex stabilization","type":"exact"},{"name":"dictyosome vesicle prefusion complex stabilisation","type":"narrow"}],"termid":"GO:0048213"}


id: PBO:0027353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_thiamine_level_during_stationary_phase","termid":"PBO:0027353"}


id: MONDO:0002050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melancholy feeling of sadness and despair.","definition_xrefs":["NCIT:C2982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mood disorder","termid":"MONDO:0005371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depressive disorder","secondary_identifiers":["ICD9:311","MESH:D003866","UMLS:C0011581","DOID:1596","SCTID:35489007","MFOMD:0000013","ICD10CM:F32","MEDGEN:4229"],"synonyms":[{"name":"depression","type":"exact"},{"name":"melancholia","type":"related"},{"name":"melancholias","type":"related"},{"name":"mental depression","type":"exact"},{"name":"syndrome, depressive","type":"related"},{"name":"syndromes, depressive","type":"related"}],"termid":"MONDO:0002050","xrefs":{"Monarch":{"xref_id":"0002050"}}}


id: PBO:0067016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 26, pseudogene","termid":"PBO:0067016"}


id: PBO:0000307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp7 (predicted)","termid":"PBO:0000307"}


id: PBO:0109124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 475","termid":"PBO:0109124"}


id: PBO:0089754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin 13","termid":"PBO:0089754"}


id: PBO:0113103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase, potent G-quadruplex DNA binder/unwinder; possesses strand annealing activity; promotes DNA synthesis during break-induced replication; involved in crossover recombination; works with Hrq1p to maintain telomere length homeostasis; translation from different start sites produces mitochondrial (DNA repair and recombination) and nuclear (catalytic inhibitor of telomerase) isoforms; mutations affect Zn, Fe homeostasis; regulated by Rad53p-dependent phosphorylation in rho0 cells","termid":"PBO:0113103"}


id: GO:0051473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosylglycerol, alpha-D-glucopyranosyl-alpha-(1,2)-glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"alditol biosynthetic process","termid":"GO:0019401"},{"relation_name":"is_a","term_name":"glucosylglycerol metabolic process","termid":"GO:0051472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"glucosylglycerol biosynthetic process","synonyms":[{"name":"glucosylglycerol anabolism","type":"exact"},{"name":"glucosylglycerol biosynthesis","type":"exact"},{"name":"glucosylglycerol formation","type":"exact"},{"name":"glucosylglycerol synthesis","type":"exact"}],"termid":"GO:0051473"}


id: MONDO:0018743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immune-mediated acquired neuromuscular junction disease (obsolete MONDO:0018743)","secondary_identifiers":["Orphanet:464764"],"termid":"MONDO:0018743","xrefs":{"Monarch":{"xref_id":"0018743"}}}


id: MONDO:0016500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute sensory ataxic neuropathy is a rare variant of Guillain-Barré syndrome characterized by acute onset monophasic sensory neuropathy with diminished or absent tendon reflexes, loss of proprioception, positive Romberg sign and nerve conduction features of demyelination. It presents several weeks after acute infection with paresthesias, ataxia and neuropathic pain.","definition_xrefs":["Orphanet:231466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute sensory ataxic neuropathy","secondary_identifiers":["SCTID:766049000","MEDGEN:1641312","icd11.foundation:1951716831","GARD:20618","UMLS:C4707661"],"synonyms":[{"name":"ASAN","type":"exact"},{"name":"acute sensory ataxic GBS","type":"exact"},{"name":"acute sensory ataxic Guillain-Barre syndrome","type":"exact"},{"name":"acute sensory ataxic Guillain-Barré syndrome","type":"exact"}],"termid":"MONDO:0016500","xrefs":{"Monarch":{"xref_id":"0016500"}}}


id: PBO:0090459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF1A-like","termid":"PBO:0090459"}


id: GO:1904373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a kainic acid stimulus.","definition_xrefs":["GO_REF:0000071","PMID:17443789","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to kainic acid","termid":"GO:1904373"}


id: MONDO:0024533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary pulmonary hypertension in which the cause of the disease is a mutation in the BMPR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heritable pulmonary arterial hypertension","termid":"MONDO:0017148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary hypertension, primary, 1","secondary_identifiers":["OMIM:178600","UMLS:C4552070","MEDGEN:1643124"],"synonyms":[{"name":"BMPR2 primary pulmonary hypertension","type":"exact"},{"name":"PHT","type":"related"},{"name":"PPH1","type":"related"},{"name":"Pph1 with Hht","type":"related"},{"name":"primary pulmonary hypertension caused by mutation in BMPR2","type":"exact"},{"name":"pulmonary arterial hypertension","type":"related"},{"name":"pulmonary hypertension, familial primary, 1, with or without HHT","type":"exact"},{"name":"pulmonary hypertension, primary, 1","type":"exact"},{"name":"pulmonary hypertension, primary, 1, with hereditary hemorrhagic telangiectasia","type":"related"},{"name":"pulmonary hypertension, primary, Dexfenfluramine-associated","type":"related"},{"name":"pulmonary hypertension, primary, Fenfluramine-associated","type":"related"},{"name":"pulmonary hypertension, primary, fenfluramine or dexfenfluramine-associated","type":"exact"}],"termid":"MONDO:0024533","xrefs":{"Monarch":{"xref_id":"0024533"}}}


id: PBO:0073598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHQ1, H/ACA ribonucleoprotein assembly factor","termid":"PBO:0073598"}


id: GO:0002054
data:
  {"annotated_genes":["SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002055"}]},"cv_name":"molecular_function","definition":"Binding to a nucleobase, any of a class of pyrmidines or purines, organic nitrogenous bases.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nucleobase binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0002054","terms_by_termid":{"GO:0002055":null}}


id: PBO:0058988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT10 pseudogene 2","termid":"PBO:0058988"}


id: PBO:0052800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 40","termid":"PBO:0052800"}


id: MONDO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete severe congenital neutropenia (obsolete MONDO:0000364)","termid":"MONDO:0000364","xrefs":{"Monarch":{"xref_id":"0000364"}}}


id: GO:1904279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase V.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24726328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"transcription by RNA polymerase V","termid":"GO:0001060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"regulation of transcription by RNA polymerase V","synonyms":[{"name":"regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"regulation of transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:1904279"}


id: PBO:0056647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 8","termid":"PBO:0056647"}


id: MONDO:0002532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that is composed of squamous epithelial cells. Squamous cell carcinoma is a representative example.","definition_xrefs":["NCIT:C3792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squamous cell neoplasm","secondary_identifiers":["DOID:3168","MEDGEN:60219","UMLS:C0206720","MESH:D018307"],"synonyms":[{"name":"epidermoid cell neoplasm","type":"exact"},{"name":"epidermoid cell tumor","type":"exact"},{"name":"epidermoid cell tumour","type":"exact"},{"name":"squamous cell neoplasm","type":"exact"},{"name":"squamous cell tumor","type":"exact"},{"name":"squamous cell tumor (qualifier value)","type":"exact"},{"name":"squamous cell tumour","type":"exact"},{"name":"squamous cell tumour (qualifier value)","type":"exact"}],"termid":"MONDO:0002532","xrefs":{"Monarch":{"xref_id":"0002532"}}}


id: MONDO:0021339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that involves the hard palate.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hard palate cancer","termid":"MONDO:0004719"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of hard palate","secondary_identifiers":["NCIT:C8394","SCTID:254434008","UMLS:C0345550","MEDGEN:138019"],"synonyms":[{"name":"carcinoma of hard palate","type":"exact"},{"name":"carcinoma of the hard palate","type":"exact"},{"name":"hard palate carcinoma","type":"exact"}],"termid":"MONDO:0021339","xrefs":{"Monarch":{"xref_id":"0021339"}}}


id: PBO:0027417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth","termid":"PBO:0027417"}


id: GO:0051392
data:
  {"annotated_genes":["SJAG_01877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72701],"is_not":false,"summary":null,"term":"GO:0051392"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in tRNA + acetyl-CoA + ATP + H2O = ADP + an N4-acetylcytidine in tRNA + CoA + H+ + phosphate.","definition_xrefs":["RHEA:53876","PMID:15037780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"tRNA N4-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"tRNA cytidine N4-acetyltransferase activity","type":"exact"}],"termid":"GO:0051392","terms_by_termid":{"GO:0051392":null}}


id: PBO:0056146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mab-21 like 1","termid":"PBO:0056146"}


id: PBO:0088844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease activator Ctp1","termid":"PBO:0088844"}


id: GO:1900648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chanoclavine-I aldehyde biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chanoclavine-I aldehyde biosynthetic process","termid":"GO:1900646"},{"relation_name":"is_a","term_name":"positive regulation of ergot alkaloid biosynthetic process","termid":"GO:1900824"},{"relation_name":"positively_regulates","term_name":"chanoclavine-I aldehyde biosynthetic process","termid":"GO:1900569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of chanoclavine-I aldehyde biosynthetic process","synonyms":[{"name":"activation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"activation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"activation of chanoclavine-I aldehyde biosynthetic process","type":"narrow"},{"name":"activation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"activation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde synthesis","type":"exact"}],"termid":"GO:1900648"}


id: PBO:0070320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 9","termid":"PBO:0070320"}


id: PBO:0070470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 5","termid":"PBO:0070470"}


id: PBO:0065873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB28, member RAS oncogene family pseudogene 1","termid":"PBO:0065873"}


id: MONDO:0002074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthropathy resulting from Behcet's syndrome.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Behcet syndrome arthropathy","secondary_identifiers":["MEDGEN:102354","DOID:1670","UMLS:C0157770","NCIT:C35225","ICD9:711.2","ICD9:711.23","ICD9:711.20","ICD9:711.28","SCTID:62918002","ICD9:711.26"],"synonyms":[{"name":"Behcet syndrome arthropathy","type":"exact"},{"name":"Behcet's syndrome arthropathy","type":"exact"},{"name":"arthropathy in Behcet's syndrome","type":"exact"},{"name":"arthropathy in Behcet's syndrome involving ankle and foot","type":"exact"},{"name":"arthropathy in Behcet's syndrome involving forearm","type":"exact"},{"name":"arthropathy in Behcet's syndrome involving hand","type":"exact"},{"name":"arthropathy in Behcet's syndrome involving lower leg","type":"exact"},{"name":"arthropathy in Behcet's syndrome involving multiple sites","type":"exact"},{"name":"arthropathy in Behcet's syndrome involving pelvic region and thigh","type":"exact"},{"name":"arthropathy in Behcet's syndrome involving shoulder region","type":"exact"},{"name":"arthropathy in Behcet's syndrome involving upper arm","type":"exact"}],"termid":"MONDO:0002074","xrefs":{"Monarch":{"xref_id":"0002074"}}}


id: PBO:0085554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing a C-terminal SH3 domain; binds Las17p, which is a homolog of human Wiskott-Aldrich Syndrome protein involved in actin patch assembly and actin polymerization; protein abundance increases in response to DNA replication stress; LSB3 has a paralog, YSC84, that arose from the whole genome duplication","termid":"PBO:0085554"}


id: PBO:0052926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-9, pseudogene","termid":"PBO:0052926"}


id: PBO:0026713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_translation_in_response_to_UV","termid":"PBO:0026713"}


id: MONDO:0013010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 8p22-p21.3.","definition_xrefs":["DOID:0110522","PMID:19229252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 71","secondary_identifiers":["GARD:22630","MEDGEN:411609","MESH:C567562","OMIM:612789","UMLS:C2748554"],"synonyms":[{"name":"DFNB71","type":"narrow"},{"name":"autosomal recessive deafness 71","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 71","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 71","type":"narrow"},{"name":"deafness, autosomal recessive 71","type":"narrow"}],"termid":"MONDO:0013010","xrefs":{"Monarch":{"xref_id":"0013010"}}}


id: GO:0005077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to MAP kinase and anchors it to a particular subcellular location.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP-kinase anchoring activity (obsolete GO:0005077)","synonyms":[{"name":"MAP-kinase anchor protein activity","type":"exact"},{"name":"MAP-kinase anchoring activity","type":"exact"}],"termid":"GO:0005077"}


id: MONDO:0043187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pulmonary artery agenesis (obsolete MONDO:0043187)","termid":"MONDO:0043187","xrefs":{"Monarch":{"xref_id":"0043187"}}}


id: PBO:0056200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A9","termid":"PBO:0056200"}


id: GO:0075050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of symbiont cell wall strengthening during entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of symbiont cell wall strengthening involved in entry into host (obsolete GO:0075050)","synonyms":[{"name":"positive regulation of symbiont cell wall strengthening during entry into host","type":"related"}],"termid":"GO:0075050"}


id: PBO:0081292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 75a","termid":"PBO:0081292"}


id: GO:0097061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a dendritic spine. A dendritic spine is a specialized protrusion from a neuronal dendrite and is involved in synaptic transmission.","definition_xrefs":["GOC:BHF","PMID:20410104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynapse organization","termid":"GO:0099173"},{"relation_name":"is_a","term_name":"neuron projection organization","termid":"GO:0106027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic spine organization","synonyms":[{"name":"dendritic spine organisation","type":"exact"}],"termid":"GO:0097061"}


id: GO:0047317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + 3-amino-6-acetamidohexanoate = L-glutamate + 3-oxo-6-acetamidohexanoate.","definition_xrefs":["MetaCyc:2.6.1.65-RXN","EC:2.6.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"N6-acetyl-beta-lysine transaminase activity","secondary_identifiers":["RHEA:16889"],"synonyms":[{"name":"6-acetamido-3-aminohexanoate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"N(6)-acetyl-beta-lysine aminotransferase activity","type":"related"},{"name":"N6-acetyl-beta-lysine aminotransferase activity","type":"exact"},{"name":"epsilon-acetyl-beta-lysine aminotransferase activity","type":"related"}],"termid":"GO:0047317"}


id: PR:Q10489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase E1 component subunit alpha, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.03","secondary_identifiers":["UniProtKB:Q10489"],"synonyms":[{"name":"PDHE1-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC26F1.03","type":"related"},{"name":"Spom972h-PDHA2","type":"exact"}],"termid":"PR:Q10489"}


id: PBO:0041991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 34 pseudogene 1","termid":"PBO:0041991"}


id: GO:0000088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which is the first stage of M phase of mitosis and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prophase","termid":"GO:0051324"},{"relation_name":"part_of","term_name":"mitotic M phase","termid":"GO:0000087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000087"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000087","GO:0008150"],"is_obsolete":false,"name":"mitotic prophase","termid":"GO:0000088"}


id: PBO:0002037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L21 (predicted)","termid":"PBO:0002037"}


id: GO:2000657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apolipoprotein binding.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apolipoprotein binding","termid":"GO:2000657"}


id: MONDO:0015299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asherman syndrome","secondary_identifiers":["MedDRA:10022821","NORD:811","UMLS:C0156372","GARD:5853","Orphanet:137686","SCTID:48236007","icd11.foundation:2022431339","MEDGEN:57629","MedDRA:10053868"],"synonyms":[{"name":"Asherman syndrome","type":"exact"},{"name":"Asherman's Syndrome","type":"exact"},{"name":"Asherman's syndrome","type":"related"},{"name":"intrauterine adhesions","type":"exact"},{"name":"intrauterine synechiae","type":"exact"},{"name":"uterine synechiae","type":"related"}],"termid":"MONDO:0015299","xrefs":{"Monarch":{"xref_id":"0015299"}}}


id: GO:0035703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a monocyte from the bone marrow to the blood stream.","definition_xrefs":["GOC:BHF","CL:0000576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte migration into blood stream","synonyms":[{"name":"release of monocytes into circulation","type":"exact"}],"termid":"GO:0035703"}


id: MONDO:0001654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the spermatic cord.","direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive organ cancer","termid":"MONDO:0005836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spermatic cord cancer","secondary_identifiers":["MEDGEN:102278","NCIT:C3559","UMLS:C0153603","SCTID:363453008","DOID:13169","ICD9:187.6"],"synonyms":[{"name":"cancer of spermatic cord","type":"exact"},{"name":"malignant neoplasm of spermatic cord","type":"exact"},{"name":"malignant neoplasm of the spermatic cord","type":"exact"},{"name":"malignant spermatic cord neoplasm","type":"exact"},{"name":"malignant spermatic cord tumor","type":"exact"},{"name":"malignant spermatic cord tumour","type":"exact"},{"name":"malignant tumor of spermatic cord","type":"exact"},{"name":"malignant tumor of the spermatic cord","type":"exact"},{"name":"malignant tumour of spermatic cord","type":"exact"},{"name":"malignant tumour of the spermatic cord","type":"exact"},{"name":"spermatic cord Ca","type":"exact"},{"name":"spermatic cord cancer","type":"exact"}],"termid":"MONDO:0001654","xrefs":{"Monarch":{"xref_id":"0001654"}}}


id: PBO:0114532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule severing ATPase kink, Knk1","termid":"PBO:0114532"}


id: FYPO:0005878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize tryptophan, and therefore requires tryptophan in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for tryptophan","synonyms":[{"name":"growth auxotrophic for tryptophan during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for tryptophan during vegetative growth","type":"exact"},{"name":"tryptophan auxotrophy","type":"exact"}],"termid":"FYPO:0005878"}


id: GO:0099191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by brain-derived neurotrophic factor (BDNF) crossing the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by BDNF","synonyms":[{"name":"trans-synaptic signaling by brain-derived neurotrophic factor","type":"exact"}],"termid":"GO:0099191"}


id: GO:0099100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A cation channel activity that is gated by binding of a G-protein beta-gamma dimer.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G-protein gated monoatomic ion channel activity","termid":"GO:0099099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"G-protein gated monoatomic cation channel activity","synonyms":[{"name":"G-protein gated cation channel activity","type":"broad"}],"termid":"GO:0099100"}


id: GO:0048257
data:
  {"annotated_genes":["SJAG_01044"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74779],"is_not":false,"summary":null,"term":"GO:0048257"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a 3' flap structure in DNA, but not other DNA structures; processes the 3' ends of Okazaki fragments in lagging strand DNA synthesis.","definition_xrefs":["PMID:10635319","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016889"},{"relation_name":"is_a","term_name":"flap endonuclease activity","termid":"GO:0048256"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3'-flap endonuclease activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"3' flap endonuclease activity","type":"exact"}],"termid":"GO:0048257","terms_by_termid":{"GO:0048257":null}}


id: PBO:0064337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLSCR5 antisense RNA 1","termid":"PBO:0064337"}


id: GO:2000954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclodextrin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"cyclodextrin metabolic process","termid":"GO:2000900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cyclodextrin metabolic process","synonyms":[{"name":"regulation of cyclodextrin metabolism","type":"exact"}],"termid":"GO:2000954"}


id: PBO:0058884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10400","termid":"PBO:0058884"}


id: MONDO:0041996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"heavy metal poisoning","termid":"MONDO:0023305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thallium poisoning","secondary_identifiers":["SCTID:51040009"],"synonyms":[{"name":"thallium poisoning","type":"exact"}],"termid":"MONDO:0041996","xrefs":{"Monarch":{"xref_id":"0041996"}}}


id: FYPO:0001906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which the response to thiamine starvation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation during vegetative growth","termid":"FYPO:0001339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cellular response to thiamine starvation","synonyms":[{"name":"abnormal cellular response to thiamin starvation","type":"exact"},{"name":"abnormal cellular response to thiamine depletion","type":"exact"},{"name":"abnormal cellular response to thiamine deprivation","type":"exact"},{"name":"abnormal cellular response to thiamine starvation during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to thiamine starvation during vegetative growth","type":"exact"},{"name":"abnormal cellular response to vitamin B1 starvation","type":"exact"}],"termid":"FYPO:0001906"}


id: PBO:0000816
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.1","termid":"PBO:0000816"}


id: MONDO:0971043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, feeding difficulties, facial dysmorphism, and brain abnormalities","secondary_identifiers":["OMIM:620852","UMLS:C5935629","MEDGEN:1857550"],"termid":"MONDO:0971043","xrefs":{"Monarch":{"xref_id":"0971043"}}}


id: PBO:0053923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1220","termid":"PBO:0053923"}


id: GO:0102294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + NAD+ = cholest-5-en-3-one + NADH + H+.","definition_xrefs":["RHEA:35459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-beta-hydroxy-Delta5-steroid dehydrogenase (NAD+) activity","termid":"GO:0003854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cholesterol dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:RXN-12693"],"termid":"GO:0102294"}


id: GO:0032499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a peptidoglycan stimulus is received by a cell and converted into a molecular signal. Peptidoglycan is a bacterial cell wall macromolecule.","definition_xrefs":["ISBN:0721601464","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of molecule of bacterial origin","termid":"GO:0032490"},{"relation_name":"is_a","term_name":"response to peptidoglycan","termid":"GO:0032494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of peptidoglycan","termid":"GO:0032499"}


id: SO:0000679
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' splice site which does not have the sequence \\\"GT\\\".","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"five_prime_cis_splice_site","termid":"SO:0000163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_canonical_five_prime_splice_site","synonyms":[{"name":"non canonical 5' splice site","type":"exact"},{"name":"non canonical five prime splice site","type":"exact"},{"name":"non-canonical five prime splice site","type":"exact"}],"termid":"SO:0000679"}


id: SO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region immediately adjacent to a promoter which may or may not contain transcription factor binding sites.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter_flanking_region","synonyms":[{"name":"promoter flanking region","type":"exact"}],"termid":"SO:0001952"}


id: PBO:0053056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0053056"}


id: PBO:0040349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 6","termid":"PBO:0040349"}


id: PBO:0040889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 15","termid":"PBO:0040889"}


id: GO:0002272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an immature plasmacytoid dendritic cell acquires the specialized features of a mature plasmacytoid dendritic cell contributing to an immune response.","definition_xrefs":["GOC:add","PMID:15990333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmacytoid dendritic cell activation involved in immune response","termid":"GO:0002271"},{"relation_name":"is_a","term_name":"plasmacytoid dendritic cell differentiation","termid":"GO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmacytoid dendritic cell differentiation involved in immune response","synonyms":[{"name":"plasmacytoid dendritic cell differentiation during immune response","type":"related"}],"termid":"GO:0002272"}


id: GO:0047114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydro-7,8-dihydroxykynurenate + NAD+ = 7,8-dihydroxykynurenate + H+ + NADH.","definition_xrefs":["RHEA:22248","EC:1.3.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"kynurenate-7,8-dihydrodiol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03251","MetaCyc:1.3.1.18-RXN"],"synonyms":[{"name":"7,8-dihydro-7,8-dihydroxykynurenate dehydrogenase activity","type":"related"},{"name":"7,8-dihydro-7,8-dihydroxykynurenate:NAD+ oxidoreductase activity","type":"related"},{"name":"7,8-dihydroxykynurenic acid 7,8-diol dehydrogenase activity","type":"related"}],"termid":"GO:0047114"}


id: PBO:0001086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L19 (predicted)","termid":"PBO:0001086"}


id: PBO:0065373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 1","termid":"PBO:0065373"}


id: MONDO:0100427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A characteristic of a diseae in which it does not result from diagnostic and therapeutic procedures undertaken on a patient.","definition_xrefs":["PMID:27407693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iatrogenic or non-iatrogenic","termid":"MONDO:0100369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-iatrogenic","termid":"MONDO:0100427","xrefs":{"Monarch":{"xref_id":"0100427"}}}


id: GO:0005148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prolactin receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"prolactin receptor binding","synonyms":[{"name":"prolactin","type":"narrow"},{"name":"prolactin receptor ligand","type":"narrow"}],"termid":"GO:0005148"}


id: PBO:0000748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg1 (predicted)","termid":"PBO:0000748"}


id: PR:000024857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteolytic cleavage product that is derived from P-factor precursor. In Schizosaccharomyces pombe 972h- the sequence is SYADFLRAYHSWNTFVNPDRPNL, corresponding to amino acids 100-122 of UniProtKB:Q09180-1.","definition_xrefs":["PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"map2/Clv:P-factor-like2","pombase_gene_id":"SPCC1795.06","synonyms":[{"name":"PomBase_original_PRO_term_name: P-factor-like 2","type":"exact"},{"name":"map2/Clv:P-factor-like2","type":"exact"}],"termid":"PR:000024857"}


id: FYPO:0003693
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of (S2-, also called acid labile sulfide) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular sulfide level","termid":"FYPO:0001412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"sulfide absent from cell","synonyms":[{"name":"sulfide absent from cell during mitotic cell cycle","type":"related"},{"name":"sulfide absent from cell during vegetative growth","type":"exact"},{"name":"sulfide ions absent from cell","type":"exact"},{"name":"sulphide absent from cell","type":"exact"}],"termid":"FYPO:0003693"}


id: GO:0072402
data:
  {"annotated_genes":["SJAG_04332","SJAG_03048","SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[102707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[102708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[94884,102709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of DNA integrity checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA integrity checkpoint effector process","type":"exact"},{"name":"response to signal involved in DNA integrity checkpoint","type":"exact"}],"termid":"GO:0072402","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:1990820":null}}


id: GO:0038029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An epidermal growth factor receptor signaling pathway in which the signal is transmitted via the MAPKKK cascade.","definition_xrefs":["PMID:21167805","GOC:bf","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor receptor signaling pathway via MAPK cascade (obsolete GO:0038029)","synonyms":[{"name":"EGFR signaling pathway via MAPKKK cascade","type":"exact"},{"name":"EGFR signaling via MAPKKK cascade","type":"exact"},{"name":"EGFR/MAPK signaling","type":"exact"},{"name":"epidermal growth factor receptor signaling pathway via MAPKKK cascade","type":"exact"},{"name":"epidermal growth factor receptor signalling pathway via MAPKKK cascade","type":"exact"}],"termid":"GO:0038029"}


id: PBO:0027900
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_calcium_import","termid":"PBO:0027900"}


id: MONDO:0010102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by congenital absence of the teeth, and sparse or absent hair. Taurodontia is also present in the majority of cases. The syndrome has been described in less than 15 patients from different families.","definition_xrefs":["Orphanet:2731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"taurodontia-absent teeth-sparse hair syndrome","secondary_identifiers":["MESH:C536945","OMIM:272980","GARD:5118","MEDGEN:338570","UMLS:C1848909"],"synonyms":[{"name":"taurodontia, absent teeth, and sparse hair","type":"related"},{"name":"taurodontia, absent teeth, sparse hair syndrome","type":"related"},{"name":"teeth, congenital absence of, with taurodontia and sparse hair","type":"related"}],"termid":"MONDO:0010102","xrefs":{"Monarch":{"xref_id":"0010102"}}}


id: PBO:0081481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 358","termid":"PBO:0081481"}


id: FYPO:0002413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable and curved along the long axis in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable curved vegetative cell population (obsolete FYPO:0002413)","synonyms":[{"name":"inviable curved vegetative cell population","type":"exact"},{"name":"population of inviable curved cells","type":"exact"}],"termid":"FYPO:0002413"}


id: MONDO:0700053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Viral infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease, non-human animal","termid":"MONDO:0700049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral infectious disease, non-human animal","termid":"MONDO:0700053","xrefs":{"Monarch":{"xref_id":"0700053"}}}


id: PR:Q10196
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC11C11.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11C11.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.05","synonyms":[{"name":"Spom972h-SPBC11C11.05","type":"exact"}],"termid":"PR:Q10196"}


id: GO:0075071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts autophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host autophagy","synonyms":[{"name":"autophagy during symbiotic interaction","type":"related"},{"name":"autophagy involved in symbiotic interaction","type":"related"},{"name":"modulation by symbiont of host autophagic process","type":"related"},{"name":"modulation by symbiont of host autophagy","type":"exact"},{"name":"symbiont-mediated modulation of host autophagy","type":"exact"}],"termid":"GO:0075071"}


id: MONDO:1010411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, non-human animal","termid":"MONDO:1010001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, dog","secondary_identifiers":["OMIA:000344-9615"],"termid":"MONDO:1010411","xrefs":{"Monarch":{"xref_id":"1010411"}}}


id: GO:0001924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B-1 B cell differentiation. B-1 B cells are a distinct subset of B cells characterized as being CD5 positive, found predominantly in the peritoneum, pleural cavities, and spleen, and enriched for self-reactivity.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell differentiation","termid":"GO:0045577"},{"relation_name":"regulates","term_name":"B-1 B cell differentiation","termid":"GO:0001923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B-1 B cell differentiation","synonyms":[{"name":"regulation of B-1 B cell development","type":"related"},{"name":"regulation of B-1 B lymphocyte differentiation","type":"exact"},{"name":"regulation of B-1 B-cell differentiation","type":"exact"},{"name":"regulation of B-1 B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0001924"}


id: PBO:0018224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med1","termid":"PBO:0018224"}


id: GO:0070085
data:
  {"annotated_genes":["SJAG_02903","SJAG_00554","SJAG_02519","SJAG_04090","SJAG_01972","SJAG_04952","SJAG_04954","SJAG_00924","SJAG_00598","SJAG_03774","SJAG_04363","SJAG_01021","SJAG_03871","SJAG_01069","SJAG_04728","SJAG_00394","SJAG_03082","SJAG_01276","SJAG_03032","SJAG_04095","SJAG_02102","SJAG_02996","SJAG_00747","SJAG_02648","SJAG_01389","SJAG_00831","SJAG_03555","SJAG_03330","SJAG_04316","SJAG_01950","SJAG_03149","SJAG_04770","SJAG_03311","SJAG_03150","SJAG_04401","SJAG_03656","SJAG_05219","SJAG_01595","SJAG_03764","SJAG_03188","SJAG_00816","SJAG_04127","SJAG_04231","SJAG_03056","SJAG_00437","SJAG_04571","SJAG_01006","SJAG_04053","SJAG_00183","SJAG_04821","SJAG_03333","SJAG_02056","SJAG_02783","SJAG_02163","SJAG_03676","SJAG_04906","SJAG_05348","SJAG_03790","SJAG_01264","SJAG_00334","SJAG_01491"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73446,77076,94240,105325,111396,77573,65806,69411,80365,63586,61695,75334,91468,64577,100107,100315],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[63658,75824,96040,114263,72313,118126,68926,58726,100351,63296,67036,74829,108700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006486"},{"annotations":[78384,76031,75149,79502,111021,77425,74006,111015,75712,79706,80276,74921,77976,70299,78687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006487"},{"annotations":[99103,76576,79103,99101,98211,79546,99104,74647,79918,100650,87848,118353,99102,105271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018279"},{"annotations":[111016,111022,118354,75150,77977,63015,79707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006493"},{"annotations":[93379,101858,106285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The covalent attachment and further modification of carbohydrate residues to a substrate molecule.","definition_xrefs":["GOC:mah","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01491":null,"SJAG_01595":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04053":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosylation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Glycosylation"],"termid":"GO:0070085","terms_by_termid":{"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006493":null,"GO:0018279":null,"GO:0035269":null}}


id: PBO:0091491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa2","termid":"PBO:0091491"}


id: PR:P17610
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.03","synonyms":[{"name":"RAB (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ypt3","type":"exact"}],"termid":"PR:P17610"}


id: PBO:0077963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 16-1","termid":"PBO:0077963"}


id: GO:0051159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-arabitol, the pentitol derived from arabinose or lyxose by reduction of the aldehyde group. The D enantiomer is present in lichens and mushrooms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabitol catabolic process","termid":"GO:0051157"},{"relation_name":"is_a","term_name":"D-arabitol metabolic process","termid":"GO:0051163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-arabitol catabolic process","synonyms":[{"name":"D-arabitol breakdown","type":"exact"},{"name":"D-arabitol catabolism","type":"exact"},{"name":"D-arabitol degradation","type":"exact"}],"termid":"GO:0051159"}


id: GO:0110161
data:
  {"annotated_genes":["SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111744],"is_not":false,"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic prophase (spindle phase one).","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic spindle organization","termid":"GO:0110028"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle formation (spindle phase one)","termid":"GO:0110159"},{"relation_name":"is_a","term_name":"positive regulation of spindle assembly","termid":"GO:1905832"},{"relation_name":"positively_regulates","term_name":"mitotic spindle formation (spindle phase one)","termid":"GO:0061804"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0044085","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"positive regulation of mitotic spindle formation (spindle phase one)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110161","terms_by_termid":{"GO:0110161":null}}


id: PBO:0040425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit e1 pseudogene 2","termid":"PBO:0040425"}


id: PBO:0075841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 2","termid":"PBO:0075841"}


id: PBO:0111687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1L3","termid":"PBO:0111687"}


id: GO:0047638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: albendazole + H+ + NADPH + O2 = albendazole S-oxide + H2O + NADP+.","definition_xrefs":["RHEA:10796","EC:1.14.13.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"albendazole monooxygenase activity","secondary_identifiers":["MetaCyc:ALBENDAZOLE-MONOOXYGENASE-RXN","KEGG_REACTION:R03712"],"synonyms":[{"name":"albendazole oxidase activity","type":"related"},{"name":"albendazole sulfoxidase activity","type":"related"},{"name":"albendazole,NADPH:oxygen oxidoreductase (sulfoxide-forming)","type":"related"}],"termid":"GO:0047638"}


id: GO:0071344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diphosphate, the anion or salt of diphosphoric acid.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diphosphate metabolic process","secondary_identifiers":["Reactome:R-HSA-71737"],"synonyms":[{"name":"pyrophosphate metabolism","type":"exact"}],"termid":"GO:0071344"}


id: GO:0052587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-acetoin + NAD+ = diacetyl + H+ + NADH. This reaction is catalyzed in the reverse direction.","definition_xrefs":["RHEA:22900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetoin dehydrogenase (NAD+) activity","termid":"GO:0019152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diacetyl reductase ((R)-acetoin forming) (NAD+) activity","secondary_identifiers":["MetaCyc:RXN-11036","KEGG_REACTION:R02855","EC:1.1.1.303"],"synonyms":[{"name":"(R)-acetoin dehydrogenase activity","type":"related"}],"termid":"GO:0052587"}


id: PBO:0089692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex histone chaperone module subunit, SNF2 family ATP-dependent chromatin remodeller Swr1","termid":"PBO:0089692"}


id: PBO:0084542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; similar to Emp24p and Erv25p; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; ERP6 has a paralog, ERP1, that arose from the whole genome duplication","termid":"PBO:0084542"}


id: MONDO:0015148
data:
  {"annotated_genes":["SJAG_02791","SJAG_02509","SJAG_02313","SJAG_04387"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85513,85514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012703"},{"annotations":[85833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009736"},{"annotations":[87229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014466"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02313":null,"SJAG_02509":null,"SJAG_02791":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly type 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19821","Orphanet:102011","UMLS:C1969029","DOID:0112232","MEDGEN:369910","icd11.foundation:1533765623"],"termid":"MONDO:0015148","terms_by_termid":{"MONDO:0009736":null,"MONDO:0012703":null,"MONDO:0014466":null},"xrefs":{"Monarch":{"xref_id":"0015148"}}}


id: FYPO:0007525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ribosome binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:19625445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased ribosome binding","synonyms":[{"name":"reduced ribosome binding","type":"exact"}],"termid":"FYPO:0007525"}


id: GO:0043490
data:
  {"annotated_genes":["SJAG_00522","SJAG_01753","SJAG_00714","SJAG_03306"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88185,96891,112122,116856],"is_not":false,"summary":null,"term":"GO:0043490"}]},"cv_name":"biological_process","definition":"The process of transferring reducing equivalents from NADH in the cytosol to the mitochondria via malate. Cytosolic aspartate aminotransferase converts aspartate to oxaloacetate, and cytosolic malate dehydrogenase uses NADH to convert oxaloacetate to malate in the cytosol; the malate-alpha-ketoglutarate carrier then transports the malate into the mitochondria where mitochondrial malate dehydrogenase uses NAD to convert malate back to oxaloacetate; the electrons on the reduced NADH are then available for use in the electron transport chain; mitochondrial aspartate aminotransferase converts oxaloacetate to aspartate, and the glutamate-aspartate carrier transports the aspartate back to the cytosol to complete the cycle.","definition_xrefs":["GOC:sjm","PMID:16368075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH metabolic process","termid":"GO:0006734"},{"relation_name":"is_a","term_name":"NAD metabolic process","termid":"GO:0019674"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00714":null,"SJAG_01753":null,"SJAG_03306":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"malate-aspartate shuttle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Malate-aspartate_shuttle","Reactome:R-HSA-9856872","MetaCyc:MALATE-ASPARTATE-SHUTTLE-PWY"],"synonyms":[{"name":"malate aspartate shuttle","type":"exact"},{"name":"malate/aspartate shuttle","type":"exact"},{"name":"malate:aspartate shuttle","type":"exact"}],"termid":"GO:0043490","terms_by_termid":{"GO:0043490":null}}


id: MONDO:0008269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly of a biphalangeal thumb or PPD1 is the most common form of preaxial polydactyly of fingers, a limb malformation syndrome, that is characterized by the duplication of one or more skeletal components of a biphalangeal thumb. Hands are preferentially affected (in bilateral), and the right hand is more commonly involved than the left.","definition_xrefs":["Orphanet:93339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preaxial polydactyly of fingers","termid":"MONDO:0017425"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of a biphalangeal thumb","secondary_identifiers":["GARD:4417","MEDGEN:237235","OMIM:174400","SCTID:445216006","MESH:C536332","UMLS:C1395852"],"synonyms":[{"name":"Fromont anomaly","type":"related"},{"name":"PPD1","type":"exact"},{"name":"polydactyly preaxial 1","type":"related"},{"name":"polydactyly, preaxial 1","type":"related"},{"name":"polydactyly, preaxial I","type":"related"},{"name":"polydactyly, preaxial type 1","type":"exact"},{"name":"preaxial polydactyly 1","type":"related"},{"name":"preaxial polydactyly type 1","type":"exact"},{"name":"thenar hypoplasia","type":"related"},{"name":"thumb polydactyly","type":"related"}],"termid":"MONDO:0008269","xrefs":{"Monarch":{"xref_id":"0008269"}}}


id: GO:0098628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphate residues from peptidyl-N-phospho-arginine to form peptidyl-arginine.","definition_xrefs":["PMID:23770242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-N-phospho-arginine dephosphorylation","termid":"GO:0098628"}


id: PBO:0052954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KTN1 antisense RNA 1","termid":"PBO:0052954"}


id: MONDO:1010511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in golden hamsters in which the cause of the disease is a mutation in the SGCD gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"},{"relation_name":"is_a","term_name":"cardiomyopathy, golden hamster","termid":"MONDO:1010437"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, SGCD-related, golden hamster","secondary_identifiers":["OMIA:002211-10036"],"termid":"MONDO:1010511","xrefs":{"Monarch":{"xref_id":"1010511"}}}


id: PBO:0086708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; member of the PIR (Proteins with Internal Repeats) family of cell wall proteins; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, and mCherry fusion localizes to the vacuole; non-essential gene that is required for sporulation; mRNA is weakly cell cycle regulated, peaking in mitosis; YJL160C has a paralog, PIR1, that arose from the whole genome duplication","termid":"PBO:0086708"}


id: GO:0002419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a tumor cell by a T cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors.","definition_xrefs":["GOC:add","PMID:16730260","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell mediated cytotoxicity","termid":"GO:0001913"},{"relation_name":"is_a","term_name":"T cell mediated immune response to tumor cell","termid":"GO:0002424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell mediated cytotoxicity directed against tumor cell target","synonyms":[{"name":"T lymphocyte mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"T-cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"T-lymphocyte mediated cytotoxicity directed against tumor cell target","type":"exact"}],"termid":"GO:0002419"}


id: PBO:0040437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8A2 pseudogene 2","termid":"PBO:0040437"}


id: PBO:0026663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_glucose-repressed_gene_mRNA_during_vegetative_growth","termid":"PBO:0026663"}


id: GO:0060256
data:
  {"annotated_genes":["SJAG_04191","SJAG_02380","SJAG_00910","SJAG_03802","SJAG_03484","SJAG_03473","SJAG_01253","SJAG_00926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103868,106570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060257"},{"annotations":[111682,114390,109068,116445,108945,106218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the non-sexual aggregation of single-celled organisms.","definition_xrefs":["PMID:10591965","PMID:15466424","PMID:16568252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"flocculation","termid":"GO:0000128"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of flocculation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1900455"],"synonyms":[{"name":"regulation of flocculation via cell wall protein-carbohydrate interaction","type":"related"}],"termid":"GO:0060256","terms_by_termid":{"GO:0060257":null,"GO:1900735":null}}


id: GO:0072206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the juxtaglomerular apparatus in the metanephros over time, from its formation to the mature structure. The juxtaglomerular apparatus is an anatomical structure which consists of juxtaglomerular cells, extraglomerular mesangial cells and the macula densa. The juxtaglomerular apparatus lies adjacent to the glomerulus and regulates kidney function by maintaining the blood flow to the kidney and the filtration rate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerular apparatus development","termid":"GO:0072051"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric juxtaglomerular apparatus development","termid":"GO:0072206"}


id: GO:0031465
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id: MONDO:0005039
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disease involving the reproductive system.","direct_ancestors":[{"relation_name":"is_a","term_name":"human 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disorder","type":"exact"}],"termid":"MONDO:0005039","terms_by_termid":{"MONDO:0008840":null,"MONDO:0008980":null,"MONDO:0009050":null,"MONDO:0009258":null,"MONDO:0009461":null,"MONDO:0009514":null,"MONDO:0009916":null,"MONDO:0010350":null,"MONDO:0010767":null,"MONDO:0010814":null,"MONDO:0010961":null,"MONDO:0011503":null,"MONDO:0011720":null,"MONDO:0011962":null,"MONDO:0012794":null,"MONDO:0013310":null,"MONDO:0013689":null,"MONDO:0013722":null,"MONDO:0013872":null,"MONDO:0013901":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014497":null,"MONDO:0014686":null,"MONDO:0014843":null,"MONDO:0014961":null,"MONDO:0020837":null,"MONDO:0021573":null,"MONDO:0024773":null,"MONDO:0030507":null,"MONDO:0030515":null,"MONDO:0030733":null,"MONDO:0030736":null,"MONDO:0030787":null,"MONDO:0030869":null,"MONDO:0030870":null,"MONDO:0030925":null,"MONDO:0032747":null,"MONDO:0054725":null,"MONDO:0054726":null,"MONDO:0054732":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0859330":null,"MONDO:0859521":null,"MONDO:0957961":null,"MONDO:0958035":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0005039"}}}


id: FYECO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which lysine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ lys","synonyms":[{"name":"lysine added","type":"exact"}],"termid":"FYECO:0000199"}


id: PBO:0018245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med12","termid":"PBO:0018245"}


id: MONDO:0004541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of testicular seminoma characterized by the presence of seminoma cells arranged in pseudoglandular patterns and few lymphocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular seminoma","termid":"MONDO:0003669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pseudoglandular variant testicular seminoma","secondary_identifiers":["MEDGEN:273633","DOID:8358","UMLS:C1515293","NCIT:C40958"],"synonyms":[{"name":"testicular seminoma, pseudoglandular variant","type":"exact"}],"termid":"MONDO:0004541","xrefs":{"Monarch":{"xref_id":"0004541"}}}


id: GO:0071616
data:
  {"annotated_genes":["SJAG_00866","SJAG_00982","SJAG_03290","SJAG_02006","SJAG_02158","SJAG_01402","SJAG_02769","SJAG_03310","SJAG_03731","SJAG_02741","SJAG_04007","SJAG_03064","SJAG_03313","SJAG_01139"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93603,98700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[68856,91779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[117350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[107785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[66262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[73114,73746,87768,79415,74982,88198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[75466],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with an acyl group.","definition_xrefs":["GOC:cjk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"},{"relation_name":"is_a","term_name":"thioester biosynthetic process","termid":"GO:0035384"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_00982":null,"SJAG_01139":null,"SJAG_01402":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03310":null,"SJAG_03313":null,"SJAG_03731":null,"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"acyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"acyl-CoA anabolism","type":"exact"},{"name":"acyl-CoA biosynthesis","type":"exact"},{"name":"acyl-CoA formation","type":"exact"},{"name":"acyl-CoA synthesis","type":"exact"}],"termid":"GO:0071616","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0010510":null,"GO:0019427":null,"GO:0035338":null,"GO:1990181":null,"GO:2001295":null}}


id: MONDO:0013692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"BAP1-related tumor predisposition syndrome (TPDS) is an inherited cancer-predisposing syndrome, associated with germline mutations in BAP1 tumor suppressor gene. The most commonly observed cancer types include uveal melanoma, malignant mesothelioma, renal cell carcinoma, lung, ovarian, pancreatic, breast cancer and meningioma, with variable age of onset. Common cutaneous manifestations include malignant melanoma, basal cell carcinoma and benign melanocytic BAP1-mutated atypical intradermal tumors (MBAIT) presenting as multiple skin-coloured to reddish-brown dome-shaped to pedunculated, well-circumscribed papules with an average size of 5 mm, histologically predominantly composed of epithelioid melanocytes with abundant amphophilic cytoplasm, prominent nucleoli and large, vesicular nuclei that vary substantially in size and shape.","definition_xrefs":["Orphanet:289539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAP1-related tumor predisposition syndrome","secondary_identifiers":["OMIM:614327","MEDGEN:482122","SCTID:765057007","UMLS:C3280492","GARD:13219","NCIT:C172639"],"synonyms":[{"name":"BAP1 tumor predisposition syndrome","type":"related"},{"name":"BAP1 tumour predisposition syndrome","type":"related"},{"name":"BAP1-related tumor predisposition syndrome","type":"exact"},{"name":"TPDS","type":"related"},{"name":"tumor predisposition syndrome","type":"related"},{"name":"tumor susceptibility linked to germline BAP1 mutations","type":"exact"},{"name":"tumour predisposition syndrome","type":"related"},{"name":"tumour susceptibility linked to germline BAP1 mutations","type":"exact"}],"termid":"MONDO:0013692","xrefs":{"Monarch":{"xref_id":"0013692"}}}


id: MONDO:0014648
data:
  {"annotated_genes":["SJAG_01625"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85474],"is_not":false,"summary":null,"term":"MONDO:0014648"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01625":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"Al-Raqad syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:897610","OMIM:616459","UMLS:C4085595"],"synonyms":[{"name":"AL-RAQAD syndrome","type":"related"},{"name":"ARS","type":"related"},{"name":"Al-Raqad syndrome","type":"exact"}],"termid":"MONDO:0014648","terms_by_termid":{"MONDO:0014648":null},"xrefs":{"Monarch":{"xref_id":"0014648"}}}


id: PBO:0116805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEPDC1 antisense RNA 2","termid":"PBO:0116805"}


id: SO:1000094
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000094 sequence_variant_causing_conservative_amino_acid_substitution (obsolete SO:1000094)","synonyms":[{"name":"mutation causing conservative amino acid substitution","type":"related"},{"name":"sequence variant causing conservative amino acid substitution","type":"exact"}],"termid":"SO:1000094"}


id: GO:0003191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the coronary sinus valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"coronary sinus valve morphogenesis","termid":"GO:0003182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary sinus valve formation","termid":"GO:0003191"}


id: MONDO:0001427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dieulafoy lesion is an abnormally large artery (a vessel that takes blood from the heart to other areas of the body) in the lining of the gastrointestinal system. It is most common in the stomach but can occur in other locations, including the small and large intestine. Dieulafoy lesions can cause severe and sudden gastrointestinal bleeding. The condition occurs in people of all ages, but is more common in males than in females.Depending upon the site of the bleeding, symptoms may include vomiting up blood (hematemesis); sticky, dark-colored stools (melena); passage of fresh blood in the stool (hematochezia); or coughing up blood (hemoptysis). Some affected individuals may only present with blood pressure problems. Treatment may include endoscopic and/or surgical techniques. Though treatment can be effective, Dieulafoy lesions and the associated blood loss can be fatal, especially if not diagnosed and treated promptly.","direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Dieulafoy lesion","secondary_identifiers":["MEDGEN:574250","ICD10CM:K31.82","SCTID:109558001","ICD9:537.84","UMLS:C0341217","DOID:12070"],"synonyms":[{"name":"Dieulafoy disease","type":"related"},{"name":"Dieulafoy lesion (hemorrhagic) of intestine","type":"exact"},{"name":"Dieulafoy lesion (hemorrhagic) of stomach and duodenum","type":"exact"},{"name":"Dieulafoy's lesion","type":"related"},{"name":"Exulceratio simplex Dieulafoy","type":"related"}],"termid":"MONDO:0001427","xrefs":{"Monarch":{"xref_id":"0001427"}}}


id: PBO:0038514
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily E member 1","termid":"PBO:0038514"}


id: MONDO:0005945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granulomatous disease caused by klebsiella rhinoscleromatis infection. Despite its name, this disease is not limited to the nose and nasopharynx but may affect any part of the respiratory tract, sometimes with extension to the lip and the skin.","definition_xrefs":["MESH:D012226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Klebsiella infectious disease","termid":"MONDO:0030603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhinoscleroma","secondary_identifiers":["ICD9:040.1","MEDGEN:20569","UMLS:C0035468","icd11.foundation:1053615368","EFO:0007470","SCTID:72409005","DOID:11336"],"termid":"MONDO:0005945","xrefs":{"Monarch":{"xref_id":"0005945"}}}


id: MONDO:0035683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adrenal hypoplasia congenita (obsolete MONDO:0035683)","secondary_identifiers":["Orphanet:595337"],"termid":"MONDO:0035683","xrefs":{"Monarch":{"xref_id":"0035683"}}}


id: PBO:0045904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 2","termid":"PBO:0045904"}


id: MOD:01417
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to a monomethylated proline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated proline","termid":"MOD:00712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated proline","synonyms":[{"name":"Me1Pro","type":"exact"}],"termid":"MOD:01417"}


id: GO:0070097
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the delta subunit of the catenin complex.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"delta-catenin binding","termid":"GO:0070097"}


id: PBO:0046888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM9C pseudogene 1","termid":"PBO:0046888"}


id: MONDO:0001185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by a retrospective gap in memory of important personal information, usually of a traumatic or stressful nature; the memory loss far exceeds ordinary forgetfulness and is not the result of substance use or the consequence of a medical condition.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dissociative disorder","termid":"MONDO:0001160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dissociative amnesia","secondary_identifiers":["DOID:11037","ICD10CM:F44.0","NCIT:C94328","SCTID:84209002","icd11.foundation:626975732","ICD9:300.12","MEDGEN:66743","UMLS:C0236795"],"synonyms":[{"name":"psychogenic amnesia","type":"exact"}],"termid":"MONDO:0001185","xrefs":{"Monarch":{"xref_id":"0001185"}}}


id: PBO:0071219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 60","termid":"PBO:0071219"}


id: PR:O74512
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.02","synonyms":[{"name":"Spom972h-wtf14","type":"exact"}],"termid":"PR:O74512"}


id: PBO:0027601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actomyosin_contractile_ring_morphology","termid":"PBO:0027601"}


id: PBO:0070483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 18","termid":"PBO:0070483"}


id: PBO:0054008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1338","termid":"PBO:0054008"}


id: MOD:00366
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-sulfo-L-serine.","definition_xrefs":["Unimod:40#S","PubMed:14752058","RESID:AA0361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfated residue","termid":"MOD:00695"},{"relation_name":"is_a","term_name":"residues isobaric at 166.98-167.00 Da","termid":"MOD:00771"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-sulfo-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(sulfooxy)propanoic acid","type":"exact"},{"name":"2-amino-3-hydroxypropanoic acid 3-sulfate","type":"exact"},{"name":"MOD_RES Sulfoserine","type":"exact"},{"name":"O-Sulfonation","type":"related"},{"name":"O-sulfo-L-serine","type":"exact"},{"name":"O3-sulfonoserine","type":"exact"},{"name":"O3-sulfoserine","type":"exact"},{"name":"Sulfo","type":"related"},{"name":"serine sulfate ester","type":"exact"}],"termid":"MOD:00366"}


id: GO:0075315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of basidium development, a process that leads to the formation of basidium, a small, specialized club-shaped structure typically bearing four basidiospores at the tips of minute projections. The basidium is unique to basidiomycetes and distinguishes them from other kinds of fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of basidium development","termid":"GO:0075314"},{"relation_name":"positively_regulates","term_name":"basidium development","termid":"GO:0075313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of basidium development","termid":"GO:0075315"}


id: GO:0009382
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses imidazoleglycerol-phosphate synthase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"imidazoleglycerol-phosphate synthase complex","synonyms":[{"name":"imidazoleglycerol phosphate synthase complex","type":"exact"}],"termid":"GO:0009382"}


id: PBO:0039338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase, placental","termid":"PBO:0039338"}


id: MONDO:0008300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Prader-Willi syndrome is a rare genetic disorder characterized by hypothalamic-pituitary abnormalities with severe hypotonia during the neonatal period and first two years of life and the onset of hyperphagia with a risk of morbid obesity during infancy and adulthood, learning difficulties and behavioral problems or severe psychiatric problems.","definition_xrefs":["Orphanet:739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"},{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder","termid":"MONDO:0100038"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"Prader-Willi syndrome","secondary_identifiers":["MedDRA:10036476","DOID:11983","UMLS:C0032897","MESH:D011218","GARD:5575","icd11.foundation:393773440","ICD9:759.81","MEDGEN:46057","NANDO:1200678","NCIT:C75463","NORD:1602","NANDO:2200411","OMIM:176270","SCTID:89392001"],"synonyms":[{"name":"PWS","type":"related"},{"name":"Prader Willi syndrome","type":"exact"},{"name":"Prader-Labhart-Willi syndrome","type":"exact"},{"name":"Prader-Willi syndrome","type":"exact"},{"name":"Prader-Willi syndrome chromosome region","type":"related"},{"name":"Prader-Willi-Labhart syndrome","type":"exact"},{"name":"Prader-Willi-like syndrome associated with chromosome 6","type":"related"},{"name":"Willi-Prader syndrome","type":"exact"},{"name":"obesity, muscular hypotonia, intellectual disability, short stature, hypogonadotropic hypogonadism, and small hands and feet","type":"related"},{"name":"obesity, muscular hypotonia, mental retardation, short stature, hypogonadotropic hypogonadism, and small hands and feet","type":"related"}],"termid":"MONDO:0008300","xrefs":{"Monarch":{"xref_id":"0008300"}}}


id: PBO:0088600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-transcriptional RNA stability regulator Mkt1","termid":"PBO:0088600"}


id: GO:0052705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + N-alpha-methyl-L-histidine = S-adenosyl-L-homocysteine + N-alpha,N-alpha-dimethyl-L-histidine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete methylhistidine N-methyltransferase activity (obsolete GO:0052705)","termid":"GO:0052705"}


id: PBO:0117138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA guanosine 2 -O-methyltransferase TARBP1","termid":"PBO:0117138"}


id: GO:0008635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase in the context of an apoptotic process and is mediated by cytochrome c.","definition_xrefs":["GOC:mtg_apoptosis","PMID:14744432","Wikipedia:Caspase","GOC:tb","GOC:dph","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c (obsolete GO:0008635)","secondary_identifiers":["Reactome:R-HSA-111459"],"synonyms":[{"name":"activation of caspase activity by cytochrome c","type":"narrow"},{"name":"caspase activation via cytochrome c","type":"exact"}],"termid":"GO:0008635"}


id: PBO:0052451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 3 pseudogene 2","termid":"PBO:0052451"}


id: PBO:0054822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2235","termid":"PBO:0054822"}


id: GO:0019940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete SUMO-dependent protein catabolic process (obsolete GO:0019940)","synonyms":[{"name":"SUMO-dependent protein breakdown","type":"exact"},{"name":"SUMO-dependent protein catabolic process","type":"exact"},{"name":"SUMO-dependent protein catabolism","type":"exact"},{"name":"SUMO-dependent protein degradation","type":"exact"}],"termid":"GO:0019940"}


id: GO:0044206
data:
  {"annotated_genes":["SJAG_04713","SJAG_04709","SJAG_00533","SJAG_04354","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68208,87806,88792,92311,93313],"is_not":false,"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"Any process which produces UMP, uridine monophosphate, from derivatives of it (e.g. cytidine, uridine, cytosine) without de novo synthesis.","definition_xrefs":["GOC:ecd","PMID:15096496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP biosynthetic process","termid":"GO:0006222"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide salvage","termid":"GO:0010138"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"UMP salvage","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"UMP biosynthesis via nucleoside salvage pathway","type":"exact"},{"name":"UMP biosynthetic process via nucleoside salvage pathway","type":"exact"}],"termid":"GO:0044206","terms_by_termid":{"GO:0044206":null}}


id: MONDO:0002054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete breast cancer (obsolete MONDO:0002054)","termid":"MONDO:0002054","xrefs":{"Monarch":{"xref_id":"0002054"}}}


id: GO:0021899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:jid","GOC:cls","GO_REF:0000021","PMID:16226447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in forebrain neuron fate commitment","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0021899"}


id: GO:0044533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of programmed cell death by apoptosis in a second organism.","definition_xrefs":["PMID:17983639","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of apoptotic process in another organism (obsolete GO:0044533)","synonyms":[{"name":"positive regulation of apoptotic process in other organism","type":"exact"}],"termid":"GO:0044533"}


id: PBO:0083692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme regulator; involved in synthesis of phosphatidylinositol 3,5-bisphosphate, in control of trafficking of some proteins to the vacuole lumen via the MVB, and in maintenance of vacuole size and acidity; binds negative (Fig4p) and positive (Fab1p) regulators of PtdIns(3,5)P(2) to control endolysosome function; similar to mammalian Vac14p","termid":"PBO:0083692"}


id: GO:0047703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-nitropropanoate + NADP+ = 3-nitroacrylate + H+ + NADPH.","definition_xrefs":["EC:1.3.1.16","RHEA:23892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"beta-nitroacrylate reductase activity","secondary_identifiers":["MetaCyc:BETA-NITROACRYLATE-REDUCTASE-RXN","KEGG_REACTION:R03900"],"synonyms":[{"name":"3-nitropropanoate:NADP+ oxidoreductase activity","type":"related"},{"name":"b-nitroacrylate reductase activity","type":"exact"}],"termid":"GO:0047703"}


id: GO:0021633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the optic nerve. This process pertains to the physical shaping of a rudimentary structure. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.","definition_xrefs":["GOC:dph","GOC:jid","ISBN:0838580343","GOC:dgh","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"optic nerve morphogenesis","termid":"GO:0021631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic nerve structural organization","synonyms":[{"name":"CN II structural organization","type":"related"},{"name":"optic nerve structural organisation","type":"exact"}],"termid":"GO:0021633"}


id: PBO:0064240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol specific phospholipase C X domain containing 3","termid":"PBO:0064240"}


id: MONDO:0014174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any renal-hepatic-pancreatic dysplasia in which the cause of the disease is a mutation in the NEK8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal-hepatic-pancreatic dysplasia","termid":"MONDO:0017417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal-hepatic-pancreatic dysplasia 2","secondary_identifiers":["MEDGEN:815764","OMIM:615415","GARD:18432","UMLS:C3809434"],"synonyms":[{"name":"NEK8 renal-hepatic-pancreatic dysplasia","type":"exact"},{"name":"RHPD2","type":"related"},{"name":"renal-hepatic-pancreatic dysplasia 2","type":"exact"},{"name":"renal-hepatic-pancreatic dysplasia caused by mutation in NEK8","type":"exact"},{"name":"renal-hepatic-pancreatic dysplasia type 2","type":"exact"}],"termid":"MONDO:0014174","xrefs":{"Monarch":{"xref_id":"0014174"}}}


id: GO:0052842
data:
  {"annotated_genes":["SJAG_00244","SJAG_04870","SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105521,115363,89065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052843"},{"annotations":[105522,89066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052845"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphospho-1D-myo-inositol pentakisphosphate + H2O = 1D-myo-inositol hexakisphosphate + phosphate.","definition_xrefs":["PMID:11502751","PMID:10827188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol diphosphate pentakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2023971","Reactome:R-HSA-1855198"],"termid":"GO:0052842","terms_by_termid":{"GO:0052843":null,"GO:0052845":null}}


id: MOD:01372
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a (2S)-4-hydroxyleucine.","definition_xrefs":["PubMed:363352","ChEBI:141825","PubMed:9164839","RESID:AA0442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated leucine","termid":"MOD:01411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S)-4-hydroxyleucine","synonyms":[{"name":"(2S)-2-amino-4-hydroxy-4-methylpentanoic acid","type":"exact"},{"name":"(2S)-4-hydroxyleucine","type":"exact"},{"name":"MOD_RES (2S)-4-hydroxyleucine","type":"exact"},{"name":"gamma-hydroxyleucine","type":"exact"}],"termid":"MOD:01372"}


id: GO:0001839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the neural plate are generated and organized. The neural plate is a specialized region of columnar epithelial cells in the dorsal ectoderm that will give rise to nervous system tissue.","definition_xrefs":["GOC:dph","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neural plate development","termid":"GO:0001840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate morphogenesis","termid":"GO:0001839"}


id: GO:0070475
data:
  {"annotated_genes":["SJAG_03877","SJAG_02281","SJAG_02417","SJAG_01958","SJAG_02024","SJAG_03008"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76004,78501,79010,79314,80052],"is_not":false,"summary":null,"term":"GO:0070475"},{"annotations":[80501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"}]},"cv_name":"biological_process","definition":"The addition of a methyl group to an atom in the nucleoside base portion of a nucleotide residue in an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methylation","termid":"GO:0031167"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01958":null,"SJAG_02024":null,"SJAG_02281":null,"SJAG_02417":null,"SJAG_03008":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"rRNA base methylation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070475","terms_by_termid":{"GO:0070475":null,"GO:0070476":null}}


id: PBO:0045000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicer 1, ribonuclease III","termid":"PBO:0045000"}


id: PBO:0005153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASP family protein involved in Golgi vesicle transport (predicted)","termid":"PBO:0005153"}


id: GO:2000701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a glial cell-derived neurotrophic factor receptor binding to one of its physiological ligands that contributes to the formation of the ureteric bud from the Wolffian duct.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell-derived neurotrophic factor receptor signaling pathway","termid":"GO:0035860"},{"relation_name":"part_of","term_name":"ureteric bud formation","termid":"GO:0060676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","synonyms":[{"name":"GDNF receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"glial cell derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"glial cell line-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"},{"name":"glial cell-derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"glial cell-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"}],"termid":"GO:2000701"}


id: GO:0019708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of peptidyl-glycine cholest-5-en-3-beta-ol ester at the carboxy-terminus of autolytically cleaved proteins.","definition_xrefs":["RESID:AA0309"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glycine cholesteryl ester biosynthesis from peptidyl-glycine (obsolete GO:0019708)","synonyms":[{"name":"peptidyl-glycine cholesteryl ester anabolism from peptidyl-glycine","type":"exact"},{"name":"peptidyl-glycine cholesteryl ester formation from peptidyl-glycine","type":"exact"},{"name":"peptidyl-glycine cholesteryl ester synthesis from peptidyl-glycine","type":"exact"}],"termid":"GO:0019708"}


id: MONDO:0035696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A histopathological form of portosinusoidal vascular disease characterized by the presence of incomplete, thin, perforated, or blind-ended septa, which intermittently delimit rudimentary nodules, although complete cirrhotic-type regenerative nodules are not seen. Isolated collagen bundles can also be observed within the parenchyma.","definition_xrefs":["Orphanet:596941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"portosinusoidal vascular disease","termid":"MONDO:0035357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"incomplete septal cirrhosis","secondary_identifiers":["GARD:22394","ICD10CM:K74.6","UMLS:C0544815","MEDGEN:1387804"],"synonyms":[{"name":"Incomplete septal fibrosis","type":"exact"}],"termid":"MONDO:0035696","xrefs":{"Monarch":{"xref_id":"0035696"}}}


id: MONDO:0000658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mu chain disease (obsolete MONDO:0000658)","termid":"MONDO:0000658","xrefs":{"Monarch":{"xref_id":"0000658"}}}


id: PBO:0042918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFTR pseudogene 1","termid":"PBO:0042918"}


id: PBO:0005842
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.9","termid":"PBO:0005842"}


id: MONDO:0001659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0001659 (obsolete MONDO:0001659)","termid":"MONDO:0001659","xrefs":{"Monarch":{"xref_id":"0001659"}}}


id: PBO:0088014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type II phosphatidylinositol 4-kinase; binds Las17p, a homolog of human Wiskott-Aldrich Syndrome protein involved in actin patch assembly and actin polymerization","termid":"PBO:0088014"}


id: MONDO:0011192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the USH1C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 18A","secondary_identifiers":["GARD:22592","UMLS:C1865870","DOID:0110473","MEDGEN:356389","MESH:C566580","OMIM:602092"],"synonyms":[{"name":"DFNB18A","type":"narrow"},{"name":"USH1C autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 18A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 18A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in USH1C","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 18A","type":"narrow"},{"name":"deafness, autosomal recessive 18","type":"narrow"},{"name":"deafness, autosomal recessive 18A","type":"narrow"},{"name":"deafness, autosomal recessive 18a","type":"narrow"},{"name":"deafness, autosomal recessive type 18A","type":"narrow"}],"termid":"MONDO:0011192","xrefs":{"Monarch":{"xref_id":"0011192"}}}


id: MONDO:1012975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperlipidemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperlipidemia, non-human animal","termid":"MONDO:1012975","xrefs":{"Monarch":{"xref_id":"1012975"}}}


id: PBO:0071579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 8","termid":"PBO:0071579"}


id: PBO:0039548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD44 antisense RNA 1","termid":"PBO:0039548"}


id: GO:0015275
data:
  {"annotated_genes":["SJAG_02532","SJAG_04668","SJAG_05229","SJAG_02877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92690,92748,99954,114231],"is_not":false,"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens in response to a mechanical stress in the form of stretching.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel activity","termid":"GO:0005262"},{"relation_name":"is_a","term_name":"mechanosensitive monoatomic cation channel activity","termid":"GO:0140135"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02532":null,"SJAG_02877":null,"SJAG_04668":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"stretch-activated, monoatomic cation-selective, calcium channel activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"stretch-activated, cation-selective, calcium channel activity","type":"broad"}],"termid":"GO:0015275","terms_by_termid":{"GO:0015275":null}}


id: GO:0008436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete heterogeneous nuclear ribonucleoprotein (obsolete GO:0008436)","synonyms":[{"name":"heterogeneous nuclear ribonucleoprotein","type":"exact"},{"name":"hnRNP","type":"exact"}],"termid":"GO:0008436"}


id: GO:0016841
data:
  {"annotated_genes":["SJAG_04827","SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008721"},{"annotations":[77845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004794"}]},"cv_name":"molecular_function","definition":"Catalysis of the release of ammonia by the cleavage of a carbon-nitrogen bond or the reverse reaction with ammonia as a substrate.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen lyase activity","termid":"GO:0016840"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00830":null,"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"ammonia-lyase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:4.3.1.-"],"termid":"GO:0016841","terms_by_termid":{"GO:0004794":null,"GO:0008721":null}}


id: MONDO:0003407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian yolk sac tumor (obsolete MONDO:0003407)","termid":"MONDO:0003407","xrefs":{"Monarch":{"xref_id":"0003407"}}}


id: PBO:0043280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member D","termid":"PBO:0043280"}


id: PBO:0084969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(+)-dependent formate dehydrogenase; may protect cells from exogenous formate","termid":"PBO:0084969"}


id: GO:0048846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The long distance growth of a single cell process, that is involved in the migration of an axon growth cone, where the migration is directed to a specific target site by a combination of attractive and repulsive cues.","definition_xrefs":["GOC:ef","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon extension","termid":"GO:0048675"},{"relation_name":"is_a","term_name":"neuron projection extension involved in neuron projection guidance","termid":"GO:1902284"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon extension involved in axon guidance","termid":"GO:0048846"}


id: PBO:0002169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLDc domain protein 1","termid":"PBO:0002169"}


id: MONDO:0014772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cleft lip/palate in which the cause of the disease is a mutation in the DLX4 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft lip/palate","termid":"MONDO:0016044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 15","secondary_identifiers":["MEDGEN:909661","DOID:0080408","OMIM:616788","UMLS:C4225209","GARD:18307"],"synonyms":[{"name":"DLX4 cleft lip/palate","type":"exact"},{"name":"OFC15","type":"exact"},{"name":"cleft lip/palate caused by mutation in DLX4","type":"exact"},{"name":"orofacial cleft 15","type":"exact"},{"name":"orofacial cleft type 15","type":"exact"}],"termid":"MONDO:0014772","xrefs":{"Monarch":{"xref_id":"0014772"}}}


id: GO:1905209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiocyte differentiation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23069713","GOC:BHF","GOC:bc","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"positively_regulates","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiocyte differentiation","synonyms":[{"name":"activation of cardiac cell differentiation","type":"narrow"},{"name":"activation of cardiocyte differentiation","type":"narrow"},{"name":"activation of heart cell differentiation","type":"narrow"},{"name":"positive regulation of cardiac cell differentiation","type":"exact"},{"name":"positive regulation of heart cell differentiation","type":"exact"},{"name":"up regulation of cardiac cell differentiation","type":"exact"},{"name":"up regulation of cardiocyte differentiation","type":"exact"},{"name":"up regulation of heart cell differentiation","type":"exact"},{"name":"up-regulation of cardiac cell differentiation","type":"exact"},{"name":"up-regulation of cardiocyte differentiation","type":"exact"},{"name":"up-regulation of heart cell differentiation","type":"exact"},{"name":"upregulation of cardiac cell differentiation","type":"exact"},{"name":"upregulation of cardiocyte differentiation","type":"exact"},{"name":"upregulation of heart cell differentiation","type":"exact"}],"termid":"GO:1905209"}


id: PBO:0073858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A7","termid":"PBO:0073858"}


id: MONDO:0010790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare mitochondrial oxidative phosphorylation disorder characterized by myoclonic seizures, ataxia, generalized epilepsy, muscle weakness and ragged red fibers in the muscle biopsy.","definition_xrefs":["Orphanet:551"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"early myoclonic encephalopathy","termid":"MONDO:0016022"},{"relation_name":"excluded_subClassOf","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"mitochondrial encephalomyopathy","termid":"MONDO:0004675"},{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005027","MONDO:0002320","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"MERRF syndrome","secondary_identifiers":["OMIM:545000","UMLS:C0162672","DOID:310","MESH:D017243","SCTID:68448003","GARD:7144","NORD:1441","NANDO:1200177","ICD9:277.87","ICD10CM:E88.42","MEDGEN:56486","NCIT:C84889","MedDRA:10069825","NANDO:2200526"],"synonyms":[{"name":"Fukuhara syndrome","type":"exact"},{"name":"MERRF","type":"exact"},{"name":"MERRF syndrome","type":"exact"},{"name":"myoclonic epilepsy - ragged red fibers","type":"exact"},{"name":"myoclonic epilepsy - ragged red fibres","type":"exact"},{"name":"myoclonic epilepsy associated with ragged red fibers","type":"related"},{"name":"myoclonic epilepsy associated with ragged red fibres","type":"related"},{"name":"myoclonic epilepsy associated with ragged-RED fibers","type":"related"},{"name":"myoclonic epilepsy associated with ragged-RED fibres","type":"related"},{"name":"myoclonic epilepsy with ragged red fibers","type":"related"},{"name":"myoclonic epilepsy with ragged red fibres","type":"related"},{"name":"myoclonus epilepsy and ragged red fibers","type":"exact"},{"name":"myoclonus epilepsy and ragged red fibres","type":"exact"},{"name":"myoclonus epilepsy associated with ragged-red fibers","type":"exact"},{"name":"myoclonus epilepsy associated with ragged-red fibres","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibers","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibers (MERRF syndrome)","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibres","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibres (MERRF syndrome)","type":"exact"},{"name":"myoencephalopathy ragged-red fiber disease","type":"related"},{"name":"myoencephalopathy ragged-red fibre disease","type":"related"}],"termid":"MONDO:0010790","xrefs":{"Monarch":{"xref_id":"0010790"}}}


id: MONDO:0030957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 103","secondary_identifiers":["UMLS:C5677002","DOID:0070389","MEDGEN:1809962","OMIM:619913"],"synonyms":[{"name":"DEE103","type":"exact"},{"name":"developmental and epileptic encephalopathy 103","type":"exact"}],"termid":"MONDO:0030957","xrefs":{"Monarch":{"xref_id":"0030957"}}}


id: GO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin of the IgM isotype.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"IgM binding","termid":"GO:0001791"}


id: GO:0140628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of an outwardly rectifying potassium channel.","definition_xrefs":["PMID:28108814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel inhibitor activity","termid":"GO:0019870"},{"relation_name":"negatively_regulates","term_name":"outward rectifier potassium channel activity","termid":"GO:0015271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0005215"},{"rel_name":"negatively_regulates","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0022857"},{"rel_name":"negatively_regulates","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0140678","GO:0005215","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"outward rectifier potassium channel inhibitor activity","termid":"GO:0140628"}


id: PBO:0040896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein receptor type 2","termid":"PBO:0040896"}


id: PBO:0081727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 655","termid":"PBO:0081727"}


id: MONDO:0014186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the ARL2BP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa with or without situs inversus","secondary_identifiers":["MEDGEN:1658130","DOID:0110419","GARD:15965","ICD10CM:H35.5","OMIM:615434","UMLS:C4747737"],"synonyms":[{"name":"ARL2BP retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in ARL2BP","type":"exact"},{"name":"retinitis pigmentosa with or without situs inversus","type":"exact"}],"termid":"MONDO:0014186","xrefs":{"Monarch":{"xref_id":"0014186"}}}


id: FYPO:0008083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the endoplasmic reticulum is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal reticulophagy","termid":"FYPO:0008083"}


id: PBO:0026997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_binding_at_PCB","termid":"PBO:0026997"}


id: GO:0031113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microtubule polymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule polymerization or depolymerization","termid":"GO:0031110"},{"relation_name":"is_a","term_name":"regulation of protein polymerization","termid":"GO:0032271"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"microtubule polymerization","termid":"GO:0046785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0065003","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"regulation of microtubule polymerization","termid":"GO:0031113"}


id: PBO:0057923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3648-2","termid":"PBO:0057923"}


id: GO:0106245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-1-phosphatidylethanolamine + L-serine = L-1-phosphatidylserine + ethanolamine.","definition_xrefs":["PMID:19014349","PMID:31869331","RHEA:27606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016780"],"is_obsolete":false,"name":"L-serine-phosphatidylethanolamine phosphatidyltransferase activity","secondary_identifiers":["EC:2.7.8.29"],"termid":"GO:0106245"}


id: PBO:0086436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein of unknown function; interacts with Ulp1p at the nuclear periphery; member of DUP240 gene family","termid":"PBO:0086436"}


id: PR:O14354
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mgm101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial genome maintenance protein mgm101 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.08","synonyms":[{"name":"Spom972h-mgm101","type":"exact"}],"termid":"PR:O14354"}


id: PBO:0058667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6795","termid":"PBO:0058667"}


id: PR:O94525
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC609.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ribonuclease C609.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC609.01","synonyms":[{"name":"Spom972h-SPBC609.01","type":"exact"}],"termid":"PR:O94525"}


id: GO:0015081
data:
  {"annotated_genes":["SJAG_01541","SJAG_04167","SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[78462,80410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"}]},"cv_name":"molecular_function","definition":"Enables the transfer of sodium ions (Na+) from one side of a membrane to the other.","definition_xrefs":["GOC:BHF","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transmembrane transporter activity","termid":"GO:0046873"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_04167":null,"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sodium ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0022816"],"synonyms":[{"name":"sodium transporter activity","type":"exact"}],"termid":"GO:0015081","terms_by_termid":{"GO:0008554":null,"GO:0015385":null}}


id: PBO:0073752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 7","termid":"PBO:0073752"}


id: PBO:0071033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 35","termid":"PBO:0071033"}


id: GO:0009724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an abscisic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to abscisic acid","termid":"GO:0009737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of abscisic acid stimulus","synonyms":[{"name":"perception of abscisic acid stimulus","type":"related"}],"termid":"GO:0009724"}


id: PBO:0051169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-53","termid":"PBO:0051169"}


id: PBO:0062993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C and casein kinase substrate in neurons 2","termid":"PBO:0062993"}


id: PBO:0084437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Malate synthase, enzyme of the glyoxylate cycle; involved in utilization of non-fermentable carbon sources; expression is subject to carbon catabolite repression; localizes in peroxisomes during growth on oleic acid, otherwise cytosolic; can accept butyryl-CoA as acyl-CoA donor in addition to traditional substrate acetyl-CoA","termid":"PBO:0084437"}


id: PBO:0059646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 12","termid":"PBO:0059646"}


id: PBO:0063480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase like, testis expressed","termid":"PBO:0063480"}


id: MONDO:0022975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragmatic agenesis radial aplasia omphalocele","termid":"MONDO:0022975","xrefs":{"Monarch":{"xref_id":"0022975"}}}


id: GO:0046720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of citric acid, 2-hydroxy-1,2,3-propanetricarboxylic acid, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrate transport","termid":"GO:0015746"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"citric acid secretion","synonyms":[{"name":"citrate secretion","type":"exact"}],"termid":"GO:0046720"}


id: GO:0001649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, a mesodermal or neural crest cell that gives rise to bone.","definition_xrefs":["GOC:jid","CL:0000062","GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast differentiation","synonyms":[{"name":"osteoblast cell differentiation","type":"exact"}],"termid":"GO:0001649"}


id: PBQ:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"pb_quiescence","definition":"Cell quiescence, i.e. a specialized resting state in which the cells do not grow or divide, and the gene expression pattern changes globally, that a cell enters following cell cycle arrest in G1. IIn some cell types or under certain conditions, cellular metabolism may proceed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell quiescence","termid":"PBQ:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell quiescence following G1 arrest","synonyms":[{"name":"G0 phase","type":"related"},{"name":"cellular quiescence following G1 arrest","type":"exact"},{"name":"quiescence following G1 arrest","type":"broad"}],"termid":"PBQ:0000002"}


id: PBO:0088928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major poly(A) binding protein Pabp/Pab1-related","termid":"PBO:0088928"}


id: PBO:0081856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 789","termid":"PBO:0081856"}


id: GO:0015896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of nalidixic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nalidixic acid is a synthetic antibiotic that interferes with DNA gyrase and inhibits prokaryotic replication.","definition_xrefs":["PMID:12702699","GOC:curators","PubChem_Compound:4221"],"gene_count":0,"genotype_count":0,"name":"obsolete nalidixic acid transport (obsolete GO:0015896)","termid":"GO:0015896"}


id: GO:0055078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of sodium ions within an organism or cell.","definition_xrefs":["GOC:ai","GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"sodium ion homeostasis","termid":"GO:0055078"}


id: MONDO:0024475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell neoplasm","termid":"MONDO:0002532"},{"relation_name":"is_a","term_name":"intraepithelial neoplasia","termid":"MONDO:0024474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squamous cell intraepithelial neoplasia","secondary_identifiers":["MEDGEN:83092","NCIT:C8334","UMLS:C0333873"],"synonyms":[{"name":"SIN","type":"broad"},{"name":"sil","type":"broad"},{"name":"squamous cell intraepithelial neoplasia","type":"exact"},{"name":"squamous intraepithelial lesion","type":"exact"}],"termid":"MONDO:0024475","xrefs":{"Monarch":{"xref_id":"0024475"}}}


id: PBO:0050201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 18","termid":"PBO:0050201"}


id: GO:0045582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte differentiation","termid":"GO:0045621"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"positively_regulates","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell differentiation","synonyms":[{"name":"activation of T cell differentiation","type":"narrow"},{"name":"positive regulation of T cell development","type":"related"},{"name":"positive regulation of T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of T-cell differentiation","type":"exact"},{"name":"positive regulation of T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of T cell differentiation","type":"narrow"},{"name":"up regulation of T cell differentiation","type":"exact"},{"name":"up-regulation of T cell differentiation","type":"exact"},{"name":"upregulation of T cell differentiation","type":"exact"}],"termid":"GO:0045582"}


id: MONDO:0019416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-hypogammaglobulinemia-progressive neurological deterioration syndrome is characterized by moderate intellectual deficit, bilateral single palmar creases, seizures, variable hypogammaglobulinemia and characteristic features (synophrys, prognathism, and hirsutism). It has been reported in three males from two generations of one family. All underwent progressive neurological deterioration. This syndrome is transmitted as an X-linked trait, and the causative gene is located between Xq21.33 and Xq23.","definition_xrefs":["Orphanet:85317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked intellectual disability-hypogammaglobulinemia-progressive neurological deterioration syndrome","secondary_identifiers":["MEDGEN:930588","GARD:19053","UMLS:C4304919"],"termid":"MONDO:0019416","xrefs":{"Monarch":{"xref_id":"0019416"}}}


id: PBO:0001800
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.20","termid":"PBO:0001800"}


id: PBO:0039356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidohydrolase domain containing 2","termid":"PBO:0039356"}


id: MONDO:0017869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chondroectodermal dysplasia with night blindness is a rare genetic bone development disorder characterized by proportionate short stature, nail dysplasia (enlarged, convex, hypertrophic nails), hypodontia and night blindness. Osteopenia, a tendency to present fractures, talipes varus with abnormal gait, ear infections, and watering eyes due to narrow tear ducts are frequently associated. Radiologically patients present delayed bone age on wrist X-rays, platyspondyly, and broad metaphyses of humeri with dense and thickened growth plates.","definition_xrefs":["Orphanet:319195"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"chondroectodermal dysplasia with night blindness","secondary_identifiers":["UMLS:C4706300","GARD:21408","MEDGEN:1641815"],"termid":"MONDO:0017869","xrefs":{"Monarch":{"xref_id":"0017869"}}}


id: MONDO:0006345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A superficial fibromatosis arising from the soft tissue of the palm. It is characterized by the presence of spindle-shaped fibroblasts, and an infiltrative growth pattern. It predominantly affects adult males.","definition_xrefs":["NCIT:C3469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superficial Fibromatosis","termid":"MONDO:0016037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmar fibromatosis","secondary_identifiers":["HP:0005679","SCTID:203045001","MESH:D004387","EFO:1000438","MEDGEN:903450","UMLS:C4085370","SCTID:274142002"],"synonyms":[{"name":"Dupuytren contracture","type":"exact"},{"name":"Dupuytren contracture (disease)","type":"exact"},{"name":"Dupuytren's contracture","type":"related"},{"name":"palmar fibromatosis","type":"exact"},{"name":"palmar part of manus fibromatosis","type":"exact"}],"termid":"MONDO:0006345","xrefs":{"Monarch":{"xref_id":"0006345"}}}


id: GO:0160122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an corneal epithelial cell, any of the cells making up an corneal epithelium.","definition_xrefs":["PMID:32697979","PMID:33414365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corneal epithelial cell differentiation","termid":"GO:0160122"}


id: PBO:0065611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 5","termid":"PBO:0065611"}


id: PBO:0080833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-tRNA synthetase 1","termid":"PBO:0080833"}


id: GO:0018742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of the ether in chloro- or hydroxyepoxypropane to produce chloropropane diol or glycerol. Acts on R enantiomers.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete epoxide hydrolase B activity (obsolete GO:0018742)","termid":"GO:0018742"}


id: PBO:0080061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP30 antisense RNA 1","termid":"PBO:0080061"}


id: PR:Q10495
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26F1.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26F1.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.08c","synonyms":[{"name":"Spom972h-SPAC26F1.08c","type":"exact"}],"termid":"PR:Q10495"}


id: GO:0034965
data:
  {"annotated_genes":["SJAG_03234","SJAG_06613","SJAG_01369","SJAG_02553"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91427,105091,113795,115611],"is_not":false,"summary":null,"term":"GO:0034965"}]},"cv_name":"biological_process","definition":"Any process involved in the conversion of a primary box C/D type small nucleolar RNA (snoRNA) transcript that resides within, and is processed from, the intron of a pre-mRNA into a mature box C/D snoRNA.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intronic snoRNA processing","termid":"GO:0031070"},{"relation_name":"is_a","term_name":"box C/D sno(s)RNA processing","termid":"GO:0034963"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01369":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0008150","GO:0016074","GO:0010467"],"is_obsolete":false,"name":"intronic box C/D snoRNA processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034965","terms_by_termid":{"GO:0034965":null}}


id: PBO:0064215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCB1 intronic transcript 1","termid":"PBO:0064215"}


id: GO:0033880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phenylglyoxylyl-CoA = CoA + H+ + phenylglyoxylate.","definition_xrefs":["EC:3.1.2.25","RHEA:15337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phenylacetyl-CoA hydrolase activity","secondary_identifiers":["MetaCyc:3.1.2.25-RXN","KEGG_REACTION:R07294"],"synonyms":[{"name":"phenylglyoxylyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0033880"}


id: SO:0002385
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant within an upstream open reading frame.","definition_xrefs":["PMID:32461616","PMID:32926138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_variant","termid":"SO:0002385"}


id: GO:0050092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-tartrate + NAD+ = dihydroxyfumarate + H+ + NADH.","definition_xrefs":["EC:1.3.1.7","RHEA:18553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"meso-tartrate dehydrogenase activity","secondary_identifiers":["MetaCyc:MESO-TARTRATE-DEHYDROGENASE-RXN","KEGG_REACTION:R02544"],"synonyms":[{"name":"meso-tartrate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050092"}


id: PBO:0058654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6782","termid":"PBO:0058654"}


id: PBO:0090956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit p30, Rpp1","termid":"PBO:0090956"}


id: MONDO:0003488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anal squamous cell carcinoma (obsolete MONDO:0003488)","termid":"MONDO:0003488","xrefs":{"Monarch":{"xref_id":"0003488"}}}


id: GO:0022858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of alanine from one side of a membrane to the other. Alanine is 2-aminopropanoic acid.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"alanine transmembrane transporter activity","termid":"GO:0022858"}


id: GO:0046312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphoarginine, a phosphorylated derivative of the amino acid arginine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoarginine metabolic process","termid":"GO:0006604"},{"relation_name":"is_a","term_name":"phosphagen biosynthetic process","termid":"GO:0042396"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"phosphoarginine biosynthetic process","synonyms":[{"name":"phosphoarginine anabolism","type":"exact"},{"name":"phosphoarginine biosynthesis","type":"exact"},{"name":"phosphoarginine formation","type":"exact"},{"name":"phosphoarginine synthesis","type":"exact"}],"termid":"GO:0046312"}


id: PBO:0030262
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_trichodermin","termid":"PBO:0030262"}


id: PBO:0047299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FARP1 antisense RNA 1","termid":"PBO:0047299"}


id: MONDO:0015877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malformative syndrome with dentinogenesis imperfecta (obsolete MONDO:0015877)","secondary_identifiers":["Orphanet:180766"],"termid":"MONDO:0015877","xrefs":{"Monarch":{"xref_id":"0015877"}}}


id: GO:0042305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of the mandibular segment following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of segmental identity, head","termid":"GO:0007380"},{"relation_name":"part_of","term_name":"posterior head segmentation","termid":"GO:0035289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, mandibular segment","termid":"GO:0042305"}


id: MONDO:0006533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic lesion characterized by the proliferation of keratinizing squamous epithelium in the middle ear that results in the accumulation of keratin and cells. It is usually caused by repeated infections. If left untreated, it may increase in size and destroy the adjacent delicate bones of the middle ear.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"middle ear disorder","termid":"MONDO:0003276"},{"relation_name":"is_a","term_name":"cholesteatoma","termid":"MONDO:0006530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cholesteatoma of middle ear","secondary_identifiers":["icd11.foundation:2134365487","MEDGEN:57836","MESH:D018424","UMLS:C0155490","ICD9:385.33","EFO:1000678","ICD9:385.32","ICD9:385.3","NCIT:C3654","ICD10CM:H71","SCTID:194339007","DOID:10964"],"synonyms":[{"name":"Epidermosis of ear","type":"exact"},{"name":"Epidermosis of middle ear","type":"exact"},{"name":"cholesteatoma (disease) of middle ear","type":"exact"},{"name":"cholesteatoma of middle ear","type":"exact"},{"name":"cholesteatoma of middle ear and mastoid","type":"exact"},{"name":"cholesteatoma of middle ear and/or mastoid","type":"exact"},{"name":"cholesteatoma of the middle ear","type":"exact"},{"name":"middle ear cholesteatoma","type":"exact"},{"name":"middle ear cholesteatoma (disease)","type":"exact"},{"name":"unspecified cholesteatoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006533","xrefs":{"Monarch":{"xref_id":"0006533"}}}


id: SO:0001068
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide_repeat is a single copy of an internal sequence repetition.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_region","termid":"SO:0100021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_repeat","secondary_identifiers":["BS:00070"],"synonyms":[{"name":"polypeptide repeat","type":"exact"},{"name":"repeat","type":"related"}],"termid":"SO:0001068"}


id: PBO:0056445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 18","termid":"PBO:0056445"}


id: MOD:00442
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a peptide or protein L-arginine residue to protonated omega-N,omega-N'-dimethylated L-arginine with secondary loss of an N,N'-carbodiimide molecular fragment.","definition_xrefs":["PubMed:15835918","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated omega-N,omega-N'-dimethylated L-arginine with secondary neutral loss of N,N'-carbodiimide","synonyms":[{"name":"dCDI-NNMe2+Arg","type":"exact"}],"termid":"MOD:00442"}


id: PBO:0079010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon TGT) 4-1","termid":"PBO:0079010"}


id: PBO:0116418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR7 ortholog, implicated vacuolar acidification, autophagy, or vacuole localization","termid":"PBO:0116418"}


id: MONDO:0019716
data:
  {"annotated_genes":["SJAG_03132","SJAG_04495","SJAG_04394","SJAG_03689","SJAG_03266","SJAG_04334","SJAG_01822","SJAG_02426","SJAG_03876","SJAG_04206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018445"},{"annotations":[86844,86845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[87173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"},{"annotations":[85403,85404,85405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009416"},{"annotations":[85548,85550,85549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009965"},{"annotations":[86820,86821,86822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008318"}]},"cv_name":"mondo","definition":"A group of syndromes caused by genetic birth defects that may lead to the development of malignancies. It is characterized by a large body size or large body parts at birth, or excessive body growth early in childhood. Representative examples include neurofibromatosis, Beckwith-Wiedemann syndrome, and Sturge-Weber syndrome.","definition_xrefs":["NCIT:C94828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01822":null,"SJAG_02426":null,"SJAG_03132":null,"SJAG_03266":null,"SJAG_03689":null,"SJAG_03876":null,"SJAG_04206":null,"SJAG_04334":null,"SJAG_04394":null,"SJAG_04495":null},"genotype_count":0,"is_obsolete":false,"name":"overgrowth syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:93460","UMLS:C2986703","icd11.foundation:2113355045","MEDGEN:458929","GARD:19213"],"termid":"MONDO:0019716","terms_by_termid":{"MONDO:0008318":null,"MONDO:0009416":null,"MONDO:0009965":null,"MONDO:0011236":null,"MONDO:0011717":null,"MONDO:0018445":null},"xrefs":{"Monarch":{"xref_id":"0019716"}}}


id: GO:0061898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinoic acid + 2 H+ + O2 + 2 reduced [adrenodoxin] = all-trans-3,4-didehydro retinoic acid + 2 H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["PMID:27059013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"all-trans retinoic acid 3,4-desaturase activity","termid":"GO:0061898"}


id: GO:0098774
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteinaceous extracellular fiber, produced by an enteric bacterium, that is involved in surface and cell-cell contacts that promote community behavior and host colonization.","definition_xrefs":["PMID:16704339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus","termid":"GO:0009289"},{"relation_name":"part_of","term_name":"bacterial biofilm matrix","termid":"GO:0097311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"curli","synonyms":[{"name":"tafi","type":"narrow"},{"name":"thin aggregative fimbrae","type":"narrow"}],"termid":"GO:0098774"}


id: GO:0016962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor-associated protein activity (obsolete GO:0016962)","synonyms":[{"name":"receptor-associated protein activity","type":"exact"}],"termid":"GO:0016962"}


id: GO:1901821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alpha-zeacarotene.","definition_xrefs":["UniPathway:UPA00804","GOC:TermGenie","GOC:yaf","PMID:6060456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"carotene biosynthetic process","termid":"GO:0016120"},{"relation_name":"is_a","term_name":"alpha-zeacarotene metabolic process","termid":"GO:1901819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"alpha-zeacarotene biosynthetic process","synonyms":[{"name":"alpha-zeacarotene anabolism","type":"exact"},{"name":"alpha-zeacarotene biosynthesis","type":"exact"},{"name":"alpha-zeacarotene formation","type":"exact"},{"name":"alpha-zeacarotene synthesis","type":"exact"}],"termid":"GO:1901821"}


id: PBO:0065616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A2 pseudogene 2","termid":"PBO:0065616"}


id: FYPO:0002784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal during a cellular response to a salt stress. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased transcription during cellular response to salt stress","synonyms":[{"name":"decreased transcription during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased transcription during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced transcription during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0002784"}


id: PBO:0059467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSH5-SAPCD1 readthrough (NMD candidate)","termid":"PBO:0059467"}


id: PBO:0060766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 10","termid":"PBO:0060766"}


id: PBO:0047391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 31","termid":"PBO:0047391"}


id: MONDO:0006818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete keratoconjunctivitis sicca (obsolete MONDO:0006818)","termid":"MONDO:0006818","xrefs":{"Monarch":{"xref_id":"0006818"}}}


id: PR:C6Y4A5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6F6.19 gene.","definition_xrefs":["UniProtKB:C6Y4A5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6F6.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.19","synonyms":[{"name":"Spom972h-SPAC6F6.19","type":"exact"}],"termid":"PR:C6Y4A5"}


id: PBO:0044126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 12, pseudogene","termid":"PBO:0044126"}


id: PBO:0049706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan synthase 1","termid":"PBO:0049706"}


id: FYPO:0006957
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidinol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular histidinol level","synonyms":[{"name":"increased cellular L-histidinol level","type":"exact"},{"name":"increased cellular histidinol level during mitotic cell cycle","type":"related"},{"name":"increased cellular histidinol level during vegetative growth","type":"exact"},{"name":"increased histidinol accumulation","type":"related"}],"termid":"FYPO:0006957"}


id: PBO:0073277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 11","termid":"PBO:0073277"}


id: GO:0120109
data:
  {"annotated_genes":["SJAG_01067","SJAG_03092","SJAG_01777","SJAG_01837","SJAG_01263","SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116968],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120110"},{"annotations":[105425,117169,90106,76450,99449],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044820"}]},"cv_name":"biological_process","definition":"The process in which the telomeres are gathered together to a small number of foci per chromosome (usually one per chromosome or fewer), and moved to and tethered at the nuclear periphery, as part of a mitotic cell cycle.","definition_xrefs":["PMID:25778919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere localization","termid":"GO:0034397"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01067":null,"SJAG_01263":null,"SJAG_01601":null,"SJAG_01777":null,"SJAG_01837":null,"SJAG_03092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitotic telomere clustering and tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0120109","terms_by_termid":{"GO:0044820":null,"GO:0120110":null}}


id: PBO:0082142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of G1-specific transcription factors MBF and SBF; involved in regulation of the timing of G1-specific gene transcription and cell cycle initiation; localization is cell-cycle dependent and regulated by Cdc28p phosphorylation; MSA1 has a paralog, MSA2, that arose from the whole genome duplication","termid":"PBO:0082142"}


id: GO:0033018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the sarcoplasmic reticulum.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum","termid":"GO:0016529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"sarcoplasmic reticulum lumen","termid":"GO:0033018"}


id: PBO:0086962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of the Fps1p glycerol channel; under nonstress conditions, binds to Fps1p to positively regulate glycerol transport; under osmotic stress, multiple phosphorylation by Hog1p causes Ask10p to dissociate from Fps1p; forms homodimers and heterodimerizes with paralog Rgc1p; phosphorylated in response to oxidative stress; has a role in destruction of Ssn8p; associates with RNA polymerase II holoenzyme","termid":"PBO:0086962"}


id: GO:0035096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage-specific programmed cell death of cells of the larval midgut, during histolysis of the larval organ.","definition_xrefs":["GOC:mtg_apoptosis","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"part_of","term_name":"larval midgut histolysis","termid":"GO:0035069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval midgut cell programmed cell death","synonyms":[{"name":"larval midgut cell death","type":"exact"},{"name":"programmed cell death of larval midgut cells","type":"exact"}],"termid":"GO:0035096"}


id: PBO:0051704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase D","termid":"PBO:0051704"}


id: PBO:0033823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic APC activator Mfr1","termid":"PBO:0033823"}


id: PATO:0000913
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000913 qualitative value (obsolete PATO:0000913)","termid":"PATO:0000913"}


id: GO:0001605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with adrenomedullin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor activity","termid":"GO:0097642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"adrenomedullin receptor activity","synonyms":[{"name":"G10D receptor","type":"narrow"}],"termid":"GO:0001605"}


id: MONDO:0009215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi anemia caused by mutations of the FANCA gene. FANCA gene mutations are the most common cause of Fanconi anemia. This gene provides instructions for making a protein that is involved in the Fanconi anemia (FA) pathway.","definition_xrefs":["NCIT:C125702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0021190","MONDO:0005570","MONDO:0002280","MONDO:0005066"],"is_obsolete":false,"name":"Fanconi anemia complementation group A","secondary_identifiers":["UMLS:C3469521","MEDGEN:483333","DOID:0111095","GARD:15170","GTR:AN1051558","OMIM:227650"],"synonyms":[{"name":"Estren-Dameshek variant of Fanconi Anaemia","type":"related"},{"name":"Estren-Dameshek variant of Fanconi Anemia","type":"related"},{"name":"Estren-Dameshek variant of Fanconi pancytopenia","type":"related"},{"name":"FANCA","type":"exact"},{"name":"FANCA Fanconi anaemia","type":"exact"},{"name":"FANCA Fanconi anemia","type":"exact"},{"name":"Fanconi Anaemia","type":"related"},{"name":"Fanconi Anemia","type":"related"},{"name":"Fanconi Anemia, Estren-Dameshek variant","type":"related"},{"name":"Fanconi Anemia, complementation group type a","type":"exact"},{"name":"Fanconi anaemia caused by mutation in FANCA","type":"exact"},{"name":"Fanconi anaemia complementation group type A","type":"exact"},{"name":"Fanconi anemia caused by mutation in FANCA","type":"exact"},{"name":"Fanconi anemia complementation group A","type":"exact"},{"name":"Fanconi anemia complementation group type A","type":"exact"},{"name":"Fanconi anemia, complementation group A","type":"related"}],"termid":"MONDO:0009215","xrefs":{"Monarch":{"xref_id":"0009215"}}}


id: PBO:0012859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp45","termid":"PBO:0012859"}


id: PBO:0049751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxycarboxylic acid receptor 1","termid":"PBO:0049751"}


id: GO:0052710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-alpha,N-alpha,N-alpha-trimethyl-L-histidine, also known as histidine betaine or hercynine, a trimethylated derivative of histidine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine metabolic process","termid":"GO:0052708"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine catabolic process","synonyms":[{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine breakdown","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine catabolism","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine degradation","type":"exact"},{"name":"hercynine breakdown","type":"exact"},{"name":"hercynine catabolic process","type":"exact"},{"name":"hercynine catabolism","type":"exact"},{"name":"hercynine degradation","type":"exact"},{"name":"histidine betaine breakdown","type":"exact"},{"name":"histidine betaine catabolic process","type":"exact"},{"name":"histidine betaine catabolism","type":"exact"},{"name":"histidine betaine degradation","type":"exact"}],"termid":"GO:0052710"}


id: PATO:0001336
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual whose sex is unknown.","definition_xrefs":["MGED:MGED"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001336 unknown sex (obsolete PATO:0001336)","termid":"PATO:0001336"}


id: PBO:0003640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic forkhead transcription factor Mei4","termid":"PBO:0003640"}


id: GO:0004935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine and transmitting the signal across the membrane by activating the alpha-subunit of an associated heterotrimeric G-protein complex.","definition_xrefs":["IUPHAR_GPCR:1274","GOC:bf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"adrenergic receptor activity","secondary_identifiers":["Wikipedia:Adrenergic_receptor"],"synonyms":[{"name":"adrenoceptor activity","type":"exact"}],"termid":"GO:0004935"}


id: PBO:0018277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med4","termid":"PBO:0018277"}


id: PBO:0116743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related BAF chromatin remodeling complex subunit ATPase 2","termid":"PBO:0116743"}


id: PBO:0061219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 10","termid":"PBO:0061219"}


id: PBO:0081698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 620","termid":"PBO:0081698"}


id: GO:0018270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-alanine ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of an alanyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0163"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI anchor biosynthetic process via N-alanyl-glycosylphosphatidylinositolethanolamine (obsolete GO:0018270)","termid":"GO:0018270"}


id: MONDO:1012569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatocellular fibrinogen storage disease, non-human animal","termid":"MONDO:1011782"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocellular fibrinogen storage disease, cattle","secondary_identifiers":["OMIA:002582-9913"],"termid":"MONDO:1012569","xrefs":{"Monarch":{"xref_id":"1012569"}}}


id: PBO:0073546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and SYLF domain containing 1","termid":"PBO:0073546"}


id: GO:0045268
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The hexamer that possesses the catalytic activity of the plasma membrane hydrogen-transporting ATP synthase. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase, catalytic core (obsolete GO:0045268)","synonyms":[{"name":"hydrogen-transporting ATP synthase, catalytic core","type":"broad"},{"name":"proton-transporting ATP synthase, catalytic core","type":"broad"}],"termid":"GO:0045268"}


id: FYPO:0003793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to osmotic stress is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during cellular response to osmotic stress","synonyms":[{"name":"normal RNA accumulation during cellular response to osmotic stress","type":"related"},{"name":"normal RNA level during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to osmotic stress","type":"narrow"},{"name":"normal transcript level during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0003793"}


id: GO:0031211
data:
  {"annotated_genes":["SJAG_01349","SJAG_04451"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75226,110453],"is_not":false,"summary":null,"term":"GO:0031211"}]},"cv_name":"cellular_component","definition":"A complex of the endoplasmic reticulum that catalyzes S-palmitoylation, the addition of palmitate (C16:0) or other long-chain fatty acids to proteins at a cysteine residue.","definition_xrefs":["GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoyltransferase complex","termid":"GO:0002178"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01349":null,"SJAG_04451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"endoplasmic reticulum palmitoyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031211","terms_by_termid":{"GO:0031211":null}}


id: MONDO:0021545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant mesenchymal neoplasm arising from smooth, skeletal, or cardiac muscle.","definition_xrefs":["NCIT:C4063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell neoplasm","termid":"MONDO:0002616"},{"relation_name":"is_a","term_name":"muscle tissue disorder","termid":"MONDO:0003939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myomatous neoplasm","secondary_identifiers":["UMLS:C0282606","MEDGEN:76477","MESH:D009379","MESH:D019042"],"synonyms":[{"name":"muscle neoplasm","type":"exact"},{"name":"muscle tissue neoplasm","type":"related"},{"name":"muscle tissue neoplasms","type":"related"},{"name":"muscle tumor","type":"exact"},{"name":"muscle tumour","type":"exact"},{"name":"myoblastoma","type":"related"},{"name":"myoblastomas","type":"related"},{"name":"myofibroblastoma","type":"related"},{"name":"myofibroblastomas","type":"related"},{"name":"myomatous neoplasm","type":"exact"},{"name":"myomatous tumor","type":"exact"},{"name":"myomatous tumour","type":"exact"},{"name":"neoplasm of muscle","type":"exact"},{"name":"neoplasm of the muscle","type":"exact"},{"name":"neoplasm, muscle tissue","type":"related"},{"name":"tumor of muscle","type":"exact"},{"name":"tumor of the muscle","type":"exact"},{"name":"tumour of muscle","type":"exact"},{"name":"tumour of the muscle","type":"exact"}],"termid":"MONDO:0021545","xrefs":{"Monarch":{"xref_id":"0021545"}}}


id: MONDO:0100062
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  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erm":"MONDO:0026771"},{"annotations":[85706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030059"},{"annotations":[86507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013254"},{"annotations":[87246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010466"}]},"cv_name":"mondo","definition":"A complex neurodevelopmental disorder characterized by a range of developmental delays and epileptic encephalopathy phenotypes. 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id: GO:0035363
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear body associated with the histone gene locus that is thought to contain all of the factors necessary for histone mRNA transcription and pre-mRNA processing. In Drosophila, U7 snRNP is located in the histone locus body rather than the distinct Cajal body.","definition_xrefs":["PMID:19620235","PMID:16533947","GOC:sart","PMID:18927579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005654","GO:0005575"],"is_obsolete":false,"name":"histone locus body","synonyms":[{"name":"HLB","type":"exact"}],"termid":"GO:0035363"}


id: GO:0072014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the proximal tubule over time, from its formation to the mature structure. In mammals, the proximal tubule is a nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle. It has a brush border epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal tubule development","termid":"GO:0072014"}


id: GO:0043000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi to plasma membrane CFTR protein transport (obsolete GO:0043000)","synonyms":[{"name":"Golgi to plasma membrane cystic fibrosis transmembrane conductance regulator protein transport","type":"exact"}],"termid":"GO:0043000"}


id: PBO:0048621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit 2","termid":"PBO:0048621"}


id: PBO:0054384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1780","termid":"PBO:0054384"}


id: MONDO:0020314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete refractory anemia (obsolete MONDO:0020314)","termid":"MONDO:0020314","xrefs":{"Monarch":{"xref_id":"0020314"}}}


id: SO:0002253
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A portion of a stem loop secondary structure in RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_sequence_secondary_structure","termid":"SO:0000122"},{"relation_name":"part_of","term_name":"stem_loop","termid":"SO:0000313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem_loop_region","synonyms":[{"name":"stem loop region","type":"exact"}],"termid":"SO:0002253"}


id: PBO:0011406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-entity","termid":"PBO:0011406"}


id: GO:0102507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-4-hydroxybenzoyl-beta-D-glucose = cyanidin 3,7-di-O-beta-D-glucoside betaine + 4-hydroxybenzoic acid + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside 7-O-glucosyltransferase (hydroxybenzoly-glucose dependent) activity (obsolete GO:0102507)","termid":"GO:0102507"}


id: MONDO:0000739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the uvula.","definition_xrefs":["NCIT:C128385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upper respiratory tract disorder","termid":"MONDO:0004867"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uvulitis","secondary_identifiers":["ICD9:528.3","DOID:0060310","MEDGEN:508266","UMLS:C0042174","SCTID:300932000","MedDRA:10051962","icd11.foundation:776797866"],"synonyms":[{"name":"acute uvulitis","type":"narrow"},{"name":"inflammation of palatine uvula","type":"exact"},{"name":"palatine uvula inflammation","type":"exact"}],"termid":"MONDO:0000739","xrefs":{"Monarch":{"xref_id":"0000739"}}}


id: MONDO:0009685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A distal myopathy, characterized by weakness in the distal lower extremity posterior compartment (gastrocnemius and soleus muscles) and associated with difficulties in standing on tip toes.","definition_xrefs":["Orphanet:45448"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of dysferlin","termid":"MONDO:0016145"},{"relation_name":"is_a","term_name":"distal myopathy","termid":"MONDO:0018949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Miyoshi myopathy","secondary_identifiers":["NCIT:C118846","UMLS:C5553104","NANDO:1200217","MESH:C537480","OMIMPS:254130","DOID:0070198","GARD:9676","MEDGEN:1790866"],"synonyms":[{"name":"MM","type":"exact"},{"name":"MMD1","type":"narrow"},{"name":"Miyoshi distal myopathy","type":"exact"},{"name":"Miyoshi muscular dystrophy","type":"exact"},{"name":"Miyoshi muscular dystrophy 1","type":"narrow"},{"name":"Miyoshi muscular dystrophy type 1","type":"narrow"},{"name":"muscular dystrophy, distal, late onset, autosomal recessive","type":"related"}],"termid":"MONDO:0009685","xrefs":{"Monarch":{"xref_id":"0009685"}}}


id: PBO:0052447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 2 pseudogene 4","termid":"PBO:0052447"}


id: MONDO:0010904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"setting-Sun phenomenon, familial benign","secondary_identifiers":["OMIM:600598","MEDGEN:318913","MESH:C563470","UMLS:C1833577"],"synonyms":[{"name":"setting-Sun phenomenon, familial benign","type":"exact"}],"termid":"MONDO:0010904","xrefs":{"Monarch":{"xref_id":"0010904"}}}


id: FYECO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which melissic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ melissic acid","termid":"FYECO:0000053"}


id: PBO:0058619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6751","termid":"PBO:0058619"}


id: PBO:0061353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 11","termid":"PBO:0061353"}


id: GO:0044750
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80297],"is_not":false,"summary":null,"term":"GO:0044750"}]},"cv_name":"molecular_function","definition":"Catalysis of the high-affinity transfer of nickel (Ni) cations from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transmembrane transporter activity","termid":"GO:0015099"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"high-affinity nickel cation transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0044750","terms_by_termid":{"GO:0044750":null}}


