# terms

id: GO:0072005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a kidney is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of animal organ identity","termid":"GO:0048496"},{"relation_name":"part_of","term_name":"kidney rudiment formation","termid":"GO:0072003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of kidney identity","synonyms":[{"name":"maintenance of kidney anlage identity","type":"related"}],"termid":"GO:0072005"}


id: PBO:0048394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 2 like 1 pseudogene 1","termid":"PBO:0048394"}


id: MONDO:0021252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lung hilum neoplasm (obsolete MONDO:0021252)","termid":"MONDO:0021252","xrefs":{"Monarch":{"xref_id":"0021252"}}}


id: MONDO:0011526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Sebastian syndrome (obsolete MONDO:0011526)","secondary_identifiers":["NCIT:C131650"],"termid":"MONDO:0011526","xrefs":{"Monarch":{"xref_id":"0011526"}}}


id: GO:0098757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-21 stimulus.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-21","termid":"GO:0098756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-21","synonyms":[{"name":"cellular response to IL-21","type":"exact"}],"termid":"GO:0098757"}


id: MONDO:0011374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive condition caused by mutation(s) in the LDLRAP1 gene, encoding low density lipoprotein receptor adaptor protein 1. The phenotype is similar to that of familial hypercholesterolemia, but generally considered to be a milder form of hypercholesterolemia.","definition_xrefs":["NCIT:C128114"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"homozygous familial hypercholesterolemia","termid":"MONDO:0018328"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"hyperlipoproteinemia","termid":"MONDO:0037748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypercholesterolemia, familial, 4","secondary_identifiers":["DOID:0090105","GARD:18614","MEDGEN:400313","MESH:C566331","OMIM:603813","UMLS:C1863512"],"synonyms":[{"name":"ARH","type":"exact"},{"name":"ARH1","type":"narrow"},{"name":"ARH2","type":"narrow"},{"name":"FHCB1","type":"related"},{"name":"FHCB1, formerly","type":"related"},{"name":"FHCB2","type":"related"},{"name":"FHCB2, formerly","type":"related"},{"name":"autosomal recessive hypercholesterolemia 1","type":"narrow"},{"name":"autosomal recessive hypercholesterolemia 2","type":"narrow"},{"name":"familial autosomal recessive hypercholesterolemia","type":"exact"},{"name":"hypercholesterolemia, autosomal recessive","type":"related"},{"name":"hypercholesterolemia, autosomal recessive, 1","type":"related"},{"name":"hypercholesterolemia, autosomal recessive, 1, formerly","type":"related"},{"name":"hypercholesterolemia, autosomal recessive, 2","type":"related"},{"name":"hypercholesterolemia, autosomal recessive, 2, formerly","type":"related"}],"termid":"MONDO:0011374","xrefs":{"Monarch":{"xref_id":"0011374"}}}


id: PBO:0036240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nrd1 complex poly(A) binding protein Nab3 (predicted)","termid":"PBO:0036240"}


id: FYPO:0004689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from cenH measured in a cell is higher than normal. cenH is a region located between mat2-P and mat3-M that is homologous to centromeric repeats, and that produces non-coding RNAs and small interfering RNAs.","definition_xrefs":["PMID:21253571","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric transcript level","termid":"FYPO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased cenH-derived RNA level","synonyms":[{"name":"accumulation of cenH-derived RNA transcripts","type":"related"},{"name":"increased cenH RNA level","type":"exact"},{"name":"increased cenH-derived RNA accumulation","type":"related"},{"name":"increased cenH-derived RNA level during mitotic cell cycle","type":"related"},{"name":"increased cenH-derived RNA level during vegetative growth","type":"exact"},{"name":"increased cenH-derived RNA transcript level","type":"exact"}],"termid":"FYPO:0004689"}


id: PBO:0002858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human CCDC55 ortholog","termid":"PBO:0002858"}


id: PBO:0055566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3002","termid":"PBO:0055566"}


id: PBO:0078028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 18","termid":"PBO:0078028"}


id: PBO:0070450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 7","termid":"PBO:0070450"}


id: FYPO:0002026
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119876],"is_not":false,"summary":null,"term":"FYPO:0002026"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms an actomyosin contractile ring that is perpendicular to the long axis of the cell, but is not located at the midpoint of the long axis.","definition_xrefs":["PMID:8834798","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized actomyosin contractile ring","termid":"FYPO:0001369"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":1,"genotypes_by_uniquename":{"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000032","FYPO:0000138","FYPO:0001320","FYPO:0004803","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"actomyosin contractile ring displaced from midpoint","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta"],"synonyms":[{"name":"actomyosin contractile ring displaced from cell center","type":"exact"},{"name":"actomyosin contractile ring displaced from cell centre","type":"exact"},{"name":"actomyosin contractile ring displaced from cell midpoint","type":"exact"},{"name":"actomyosin contractile ring displaced from midpoint during mitotic cell cycle","type":"related"},{"name":"actomyosin contractile ring displaced from midpoint during vegetative growth","type":"exact"},{"name":"cytokinetic contractile ring displaced from midpoint","type":"exact"}],"termid":"FYPO:0002026","terms_by_termid":{"FYECO:0000162":null,"FYPO:0002026":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0018422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 70 is a very rare, complex subtype of hereditary spastic paraplegia that presents in infancy with delayed motor development (i.e. crawling, walking) and is characterized by lower limb spasticity, increased deep tendon reflexes, extensor plantar responses, impaired vibratory sensation at ankles, amyotrophy and borderline intellectual disability. Additional signs may include gait disturbances, Achilles tendon contractures, scoliosis and cerebellar abnormalities.","definition_xrefs":["Orphanet:401835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spastic paraplegia type 70","secondary_identifiers":["GARD:21700","MEDGEN:1655287","UMLS:C4749431"],"synonyms":[{"name":"SPG70","type":"exact"}],"termid":"MONDO:0018422","xrefs":{"Monarch":{"xref_id":"0018422"}}}


id: GO:0140351
data:
  {"annotated_genes":["SJAG_01731","SJAG_02897"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94765,98254],"is_not":false,"summary":null,"term":"GO:0140351"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of glycosylceramide from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP. Glycosylceramides are ceramides containing a functional group derived from a sugar.","definition_xrefs":["PMID:30530492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid transporter activity","termid":"GO:0046624"},{"relation_name":"is_a","term_name":"flippase activity","termid":"GO:0140327"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0140303","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"glycosylceramide flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"galactocerebroside flippase activity","type":"narrow"},{"name":"galactosylceramide flippase activity","type":"narrow"},{"name":"glucosylceramide flippase activity","type":"narrow"},{"name":"glycoceramide flippase activity","type":"exact"},{"name":"glycosylceramide flippase activity (exoplasmic to cytosolic leaflet)","type":"exact"}],"termid":"GO:0140351","terms_by_termid":{"GO:0140351":null}}


id: PBO:0088678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA processing protein Esf1","termid":"PBO:0088678"}


id: GO:0017182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving peptidyl-diphthamide, a modified histidine residue.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-diphthamide metabolic process (obsolete GO:0017182)","synonyms":[{"name":"peptidyl-diphthamide metabolism","type":"exact"}],"termid":"GO:0017182"}


id: PBO:0113248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetyl homoserine-O-acetyl serine sulfhydrylase; involved in methionine and cysteine biosynthesis; long considered essential for inorganic sulfur assimilation, but inefficient homocysteine synthase Hsu1p enables met17 null cells to assimilate enough inorganic sulfur for survival and proliferation; growth failure of met17 null can be explained by toxic accumulation of H2S gas due to a metabolic bottleneck","termid":"PBO:0113248"}


id: PBO:0029880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_binding","termid":"PBO:0029880"}


id: GO:0043814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phospho-(S)-lactate + GTP = lactyl-2-diphospho-5'-guanosine + diphosphate.","definition_xrefs":["PMID:18260642","RHEA:63424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"phospholactate guanylyltransferase activity","secondary_identifiers":["EC:2.7.7.68"],"termid":"GO:0043814"}


id: GO:1901767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbapenem.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:9402024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic metabolic process","termid":"GO:0030653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"carbapenem metabolic process","synonyms":[{"name":"carbapenem metabolism","type":"exact"}],"termid":"GO:1901767"}


id: PBO:0005446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK-activated protein kinase Srk1","termid":"PBO:0005446"}


id: PR:Q9P6M2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC688.03c gene.","definition_xrefs":["UniProtKB:Q9P6M2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C688.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.03c","synonyms":[{"name":"Spom972h-SPAC688.03c","type":"exact"}],"termid":"PR:Q9P6M2"}


id: GO:0007301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of the intercellular bridges that connect the germ-line cells of a female cyst.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline ring canal formation","termid":"GO:0030725"},{"relation_name":"part_of","term_name":"germarium-derived egg chamber formation","termid":"GO:0007293"},{"relation_name":"part_of","term_name":"ovarian nurse cell to oocyte transport","termid":"GO:0007300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"female germline ring canal formation","synonyms":[{"name":"nurse cell ring canal formation","type":"narrow"},{"name":"ovarian ring canal formation","type":"narrow"}],"termid":"GO:0007301"}


id: MONDO:0017793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marfanoid habitus-inguinal hernia-advanced bone age syndrome","secondary_identifiers":["Orphanet:314041","UMLS:C5190606","GARD:21368","MEDGEN:1684094"],"termid":"MONDO:0017793","xrefs":{"Monarch":{"xref_id":"0017793"}}}


id: GO:0052198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein, in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of peptidase activity in other organism involved in symbiotic interaction (obsolete GO:0052198)","synonyms":[{"name":"modulation of protease activity in other organism during symbiotic interaction","type":"related"},{"name":"modulation of protease activity in other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0052198"}


id: MOD:00994
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-bromo-L-tyrosine","termid":"MOD:01025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(79)Br labeled 3'-bromotyrosine","termid":"MOD:00994"}


id: FYPO:0006847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of protein measured in a cell is higher than normal.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased total protein level during vegetative growth","synonyms":[{"name":"increased total protein accumulation during vegetative growth","type":"related"},{"name":"increased total protein content during vegetative growth","type":"exact"},{"name":"increased total protein level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006847"}


id: GO:0005253
data:
  {"annotated_genes":["SJAG_01168","SJAG_00048"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[72013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a monoatomic anion through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:pr","GOC:dph","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_01168":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"monoatomic anion channel activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-432034","Reactome:R-HSA-9855161","Reactome:R-HSA-432036"],"synonyms":[{"name":"anion channel activity","type":"broad"},{"name":"non-selective anion channel activity","type":"narrow"}],"termid":"GO:0005253","terms_by_termid":{"GO:0005254":null,"GO:0008308":null}}


id: PBO:0070888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 20","termid":"PBO:0070888"}


id: GO:0140451
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secreted multiprotein complex composed of 4 proteins, regulating group size during aggregation in cooperative development. An example of this complex is found in Dictyostelium discoideum.","definition_xrefs":["PMID:12117815","PMID:12912898","PMID:16963635","PMID:18426773","PMID:10444594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"counting factor complex","termid":"GO:0140451"}


id: PBO:0061387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 47","termid":"PBO:0061387"}


id: FYPO:0003290
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of the glycan moiety of a glycoprotein differs from wild type.","definition_xrefs":["PMID:9125114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"output_of","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abnormal glycoprotein glycan structure","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"abnormal glycoprotein oligosaccharide structure","type":"related"}],"termid":"FYPO:0003290","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: GO:0030398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The controlled breakdown of the membranes of cargo-carrying vesicles formed during peroxisome degradation.","definition_xrefs":["GOC:mah","PMID:11382760"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal membrane disassembly (obsolete GO:0030398)","synonyms":[{"name":"peroxisomal membrane breakdown","type":"exact"},{"name":"peroxisomal membrane catabolism","type":"exact"},{"name":"peroxisomal membrane degradation","type":"exact"}],"termid":"GO:0030398"}


id: GO:0000719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The repair of UV-induced T-T, C-T and C-C dimers by directly reversing the damage to restore the original pyrimidines.","definition_xrefs":["GOC:elh","PMID:10915863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine dimer repair","termid":"GO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"photoreactive repair","synonyms":[{"name":"pyrimidine-dimer repair by photolyase","type":"narrow"}],"termid":"GO:0000719"}


id: GO:0071089
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphaV-beta3 integrin-tissue transglutaminase complex","synonyms":[{"name":"ITGAV-ITGB3-TGM2 complex","type":"narrow"}],"termid":"GO:0071089"}


id: PR:Q9UTN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid14 gene.","definition_xrefs":["UniProtKB:Q9UTN3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) RNA polymerase cid14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.13c","synonyms":[{"name":"PAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cid14","type":"exact"},{"name":"caffeine-induced death protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polynucleotide adenylyltransferase cid14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTN3"}


id: GO:0003119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of epinephrine released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction by epinephrine","termid":"GO:0003115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by neuronal epinephrine","synonyms":[{"name":"regulation of vasoconstriction by neuronal adrenaline","type":"exact"}],"termid":"GO:0003119"}


id: PBO:0070544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 10","termid":"PBO:0070544"}


id: PR:Q9P5N2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aat1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P5N2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC359.03c","synonyms":[{"name":"Spom972h-aat1","type":"exact"}],"termid":"PR:Q9P5N2"}


id: MONDO:1011259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinitis pigmentosa that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa, non-human animal","termid":"MONDO:1010334"},{"relation_name":"is_a","term_name":"retinal degeneration, cattle","termid":"MONDO:1011247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa, cattle","secondary_identifiers":["OMIA:001413-9913"],"termid":"MONDO:1011259","xrefs":{"Monarch":{"xref_id":"1011259"}}}


id: PBO:0000701
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific splicing","termid":"PBO:0000701"}


id: PR:O94271
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RING finger protein 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03807","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein P8B7.23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.23","secondary_identifiers":["UniProtKB:O94271"],"synonyms":[{"name":"Spom972h-RNF10","type":"exact"}],"termid":"PR:O94271"}


id: MONDO:0006702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurological disorder in which there is inflammation of nerve roots and peripheral nerves and destruction of the fatty protective covering (myelin sheath) over the nerves. This affects how fast the nerve signals are transmitted and leads to loss of nerve fibers. This causes weakness, paralysis and/or impairment in motor function, especially of the arms and legs (limbs). Sensory disturbance may also be present. The motor and sensory impairments usually affect both sides of the body (symmetrical), and the degree of severity and the course of disease may vary from case to case. Some affected individuals may follow a slow steady pattern of symptoms while others may have symptoms that stabilize and then relapse.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inflammatory and toxic neuropathy (obsolete MONDO:0002336)","termid":"MONDO:0002336"},{"relation_name":"is_a","term_name":"demyelinating polyneuropathy","termid":"MONDO:0003334"},{"relation_name":"is_a","term_name":"chronic polyneuropathy","termid":"MONDO:0003335"},{"relation_name":"is_a","term_name":"polyradiculoneuropathy","termid":"MONDO:0006915"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"chronic inflammatory demyelinating polyradiculoneuropathy","secondary_identifiers":["DOID:5213","NANDO:2200905","EFO:1000868","MedDRA:10057645","icd11.foundation:224318510","NCIT:C84636","UMLS:C0393819","ICD10CM:G61.81","ICD9:357.81","NANDO:2100251","ICD9:357.89","MEDGEN:98292","MESH:D020277","NANDO:1200030","GARD:6102","Orphanet:2932","SCTID:128209004"],"synonyms":[{"name":"CIDP","type":"exact"},{"name":"chronic inflammatory demyelinating polyneuritis","type":"related"},{"name":"chronic inflammatory demyelinating polyneuropathy","type":"exact"},{"name":"chronic inflammatory demyelinating polyradiculoneuropathy","type":"exact"},{"name":"chronic relapsing polyneuropathy","type":"exact"}],"termid":"MONDO:0006702","xrefs":{"Monarch":{"xref_id":"0006702"}}}


id: PBO:0055610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3049","termid":"PBO:0055610"}


id: GO:0150127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-33 production.","definition_xrefs":["GOC:aruk","PMID:29778524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-33 production","termid":"GO:0072639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-33 production","secondary_identifiers":["GO:0150123","GO:0150130"],"synonyms":[{"name":"regulation of interleukin-33 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-33 secretion","type":"narrow"}],"termid":"GO:0150127"}


id: MONDO:0007617
data:
  {"annotated_genes":["SJAG_02254"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86332],"is_not":false,"summary":null,"term":"MONDO:0007617"}]},"cv_name":"mondo","definition":"Any Coffin-Siris syndrome in which the cause of the disease is a mutation in the ARID1B gene.","definition_xrefs":["MONDO:patterns/OMIM_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02254":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Coffin-Siris syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15072","DOID:0070042","OMIM:609943","OMIM:614562","MESH:C538391","MEDGEN:482831","OMIM:135900","UMLS:C3281201"],"synonyms":[{"name":"ARID1B-related BAFopathy","type":"exact"},{"name":"COFFIN-SIRIS syndrome","type":"related"},{"name":"COFFIN-SIRIS syndrome 1","type":"exact"},{"name":"CSS","type":"related"},{"name":"CSS1","type":"exact"},{"name":"Coffin-Siris syndrome 1","type":"exact"},{"name":"MRD12","type":"exact"},{"name":"autosomal dominant mental retardation 12","type":"exact"},{"name":"fifth digit syndrome","type":"broad"},{"name":"hypertrichosis, hyperkeratosis, intellectual disability, and distinctive facial features","type":"exact"},{"name":"hypertrichosis, hyperkeratosis, mental retardation, and distinctive facial features","type":"exact"},{"name":"intellectual disability, autosomal dominant 12","type":"exact"},{"name":"mental retardation, autosomal dominant 12","type":"related"},{"name":"mental retardation, autosomal dominant type 12","type":"exact"}],"termid":"MONDO:0007617","terms_by_termid":{"MONDO:0007617":null},"xrefs":{"Monarch":{"xref_id":"0007617"}}}


id: GO:2000278
data:
  {"annotated_genes":["SJAG_02194","SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[77245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032210"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA anabolism","type":"exact"},{"name":"regulation of DNA biosynthesis","type":"exact"},{"name":"regulation of DNA formation","type":"exact"},{"name":"regulation of DNA synthesis","type":"exact"}],"termid":"GO:2000278","terms_by_termid":{"GO:0032210":null,"GO:1904332":null}}


id: PBO:0003799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAVE complex subunit Rav2","termid":"PBO:0003799"}


id: MONDO:0017400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoplastic pancreas-intestinal atresia-hypoplastic gallbladder syndrome is a rare, potentially fatal, genetic, visceral malformation syndrome characterized by neonatal diabetes, hypoplastic or annular pancreas, duodenal and jejunal atresia, as well as gallbladder aplasia or hypoplasia. Patients typically present intrauterine growth restriction, failure to thrive, malnutrition, intestinal malrotation, malabsorption, conjugated hyperbilirubinemia, acholia and infections. Cardiac anomalies may also be associated.","definition_xrefs":["Orphanet:293864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoplastic pancreas-intestinal atresia-hypoplastic gallbalder syndrome","secondary_identifiers":["GARD:5237","MEDGEN:411637","UMLS:C2748662","OMIM:615710"],"synonyms":[{"name":"MTCHRS","type":"related"},{"name":"Mitchell-Riley syndrome","type":"exact"},{"name":"diabetes, neonatal, with pancreatic hypoplasia, intestinal atresia, and gallbladder aplasia or hypoplasia","type":"related"},{"name":"hypoplastic pancreas-intestinal atresia-hypoplastic gallbalder syndrome","type":"exact"},{"name":"hypoplastic pancreas-intestinal atresia-hypoplastic gallbladder syndrome","type":"related"}],"termid":"MONDO:0017400","xrefs":{"Monarch":{"xref_id":"0017400"}}}


id: FYPO:0003455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of the breakdown of arginine into other compounds, including proline, is decreased.","definition_xrefs":["PomBase:mah","GO:0019493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased arginine catabolic process to proline","synonyms":[{"name":"decreased arginine catabolic process to proline during mitotic cell cycle","type":"related"},{"name":"decreased arginine catabolic process to proline during vegetative growth","type":"exact"},{"name":"decreased arginine catabolism to proline","type":"exact"},{"name":"reduced arginine catabolic process to proline","type":"exact"}],"termid":"FYPO:0003455"}


id: PBO:0017075
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structures of acceptor stem and anticodon/intron loop of substrate tRNA crucial for RNaseP activity","termid":"PBO:0017075"}


id: GO:0045758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin polymerization and/or depolymerization.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin polymerization and/or depolymerization (obsolete GO:0045758)","synonyms":[{"name":"positive regulation of actin polymerization and/or depolymerization","type":"exact"}],"termid":"GO:0045758"}


id: GO:0007167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell, where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"enzyme-linked receptor protein signaling pathway","synonyms":[{"name":"enzyme linked receptor protein signaling pathway","type":"exact"},{"name":"enzyme linked receptor protein signalling pathway","type":"exact"}],"termid":"GO:0007167"}


id: MONDO:0035337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurologic disease characterized by the presence of Duane retraction syndrome (i. e. a congenital cranial dysinnervation disorder with unilateral or bilateral limitation of abduction and/or adduction of the eye, as well as globe retraction and palpebral fissure narrowing on attempted adduction) in combination with congenital unilateral or bilateral hearing loss. The sidedness of hearing loss corresponds to the sidedness of the retraction syndrome.","definition_xrefs":["Orphanet:529574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Duane retraction syndrome","termid":"MONDO:0007473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Duane retraction syndrome with congenital deafness","secondary_identifiers":["MEDGEN:1804304","UMLS:C5680193","GARD:17968"],"synonyms":[{"name":"DRS with deafness","type":"exact"},{"name":"DRS with hearing loss","type":"exact"},{"name":"DURS with deafness","type":"exact"},{"name":"DURS with hearing loss","type":"exact"},{"name":"Duane retraction syndrome with congenital hearing loss","type":"exact"}],"termid":"MONDO:0035337","xrefs":{"Monarch":{"xref_id":"0035337"}}}


id: FYPO:0002524
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of NADPH-hemoprotein reductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal NADPH-hemoprotein reductase activity","termid":"FYPO:0002523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"increased NADPH-hemoprotein reductase activity","termid":"FYPO:0002524"}


id: PBO:0064438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich nuclear receptor coactivator 1","termid":"PBO:0064438"}


id: MONDO:0011471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 6p21.3.","definition_xrefs":["PMID:10577918","DOID:0110891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 3","secondary_identifiers":["MESH:C565764","MEDGEN:346785","UMLS:C1858303","OMIM:604519"],"synonyms":[{"name":"IBD3","type":"exact"},{"name":"inflammatory bowel disease 3","type":"exact"},{"name":"inflammatory bowel disease type 3","type":"exact"}],"termid":"MONDO:0011471","xrefs":{"Monarch":{"xref_id":"0011471"}}}


id: MONDO:0100213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked multiple congenital anomaly disorder with variable severity. The classic triad, which defines IFAP, is ichthyosis follicularis, atrichia, and photophobia. Some patients have additional features, including mental retardation, brain anomalies, Hirschsprung disease, corneal opacifications, kidney dysplasia, cryptorchidism, cleft palate, and skeletal malformations, particularly of the vertebrae, which constitutes BRESHECK syndrome.","definition_xrefs":["OMIM:308205"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete malformation syndrome with skin/mucosae involvement (obsolete MONDO:0015331)","termid":"MONDO:0015331"},{"relation_name":"excluded_subClassOf","term_name":"X-linked ichthyosis syndrome","termid":"MONDO:0017269"},{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary alopecia (obsolete MONDO:0021034)","termid":"MONDO:0021034"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"},{"relation_name":"is_a","term_name":"IFAP syndrome","termid":"MONDO:0100212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"IFAP syndrome 1, with or without BRESHECK syndrome","secondary_identifiers":["MEDGEN:1746744","UMLS:C5399971","DOID:0111821","NANDO:2200999","MESH:C536085","GARD:15297"],"synonyms":[{"name":"IFAP syndrome with or without BRESHECK syndrome","type":"exact"},{"name":"IFAP syndrome with or without BRESHECK syndrome, X-linked recessive","type":"exact"},{"name":"IFAP/BRESHECK syndrome","type":"exact"},{"name":"ichthyosis follicularis atrichia photophobia syndrome","type":"related"},{"name":"ichthyosis follicularis, atrichia, and photophobia with or without brain anomalies, retardation, ectodermal dysplasia, skeletal malformations, Hirschsprung disease, Ear/eye anomalies, cleft palate/cryptorchidism, and kidney dysplasia/hypoplasia","type":"exact"},{"name":"ichthyosis follicularis-alopecia-photophobia syndrome","type":"broad"}],"termid":"MONDO:0100213","xrefs":{"Monarch":{"xref_id":"0100213"}}}


id: GO:0010495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An siRNA-mediated posttranscriptional gene silencing pathway in which small interfering RNAs (siRNAs) direct the cleavage of target mRNAs, and in which the silencing signal originates in one tissue and occurs in a different tissue.","definition_xrefs":["PMID:17785412","GOC:dph","PMID:11590235","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siRNA-mediated gene silencing by mRNA destabilization","termid":"GO:0090625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"siRNA-mediated long-distance post-transcriptional gene silencing","synonyms":[{"name":"long-distance posttranscriptional gene silencing","type":"broad"},{"name":"long-distance propagation of posttranscriptional gene silencing","type":"broad"},{"name":"siRNA-mediated long-distance posttranscriptional gene silencing","type":"exact"}],"termid":"GO:0010495"}


id: PBO:0048018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMPD4 antisense RNA 1","termid":"PBO:0048018"}


id: PBO:0069378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 638, pseudogene","termid":"PBO:0069378"}


id: FYPO:0006027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more actin cables than normal.","definition_xrefs":["PomBase:mah","PMID:11694585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"actin cables present in increased numbers","synonyms":[{"name":"actin cables present in increased numbers during mitotic cell cycle","type":"related"},{"name":"actin cables present in increased numbers during vegetative growth","type":"exact"},{"name":"extra actin cables present","type":"exact"},{"name":"formin-nucleated actin cables present in increased numbers","type":"exact"},{"name":"increased level of actin cables","type":"related"}],"termid":"FYPO:0006027"}


id: PATO:0000209
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000209 digestive function (obsolete PATO:0000209)","termid":"PATO:0000209"}


id: GO:1904797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of core promoter binding.","definition_xrefs":["GO_REF:0000059","GOC:BHF_telomere","GOC:BHF","GOC:TermGenie","GOC:nc","PMID:22723415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription regulatory region DNA binding","termid":"GO:2000678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of core promoter binding","synonyms":[{"name":"down regulation of core promoter binding","type":"exact"},{"name":"down-regulation of core promoter binding","type":"exact"},{"name":"downregulation of core promoter binding","type":"exact"},{"name":"inhibition of core promoter binding","type":"narrow"}],"termid":"GO:1904797"}


id: PBO:0003851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ACN9 family protein (predicted)","termid":"PBO:0003851"}


id: MONDO:0015666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic dilatation of the right atrium (IDRA) is a rare congenital heart malformation of unknown etiology that is characterized by an extremely dilated right atrium, and that is usually asymptomatic and fortuitously discovered by echocardiography or chest radiography, and can be sometimes associated with other anomalies such as atrial arrhythmias (e.g. atrial flutter, atrial fibrillation, supraventricular tachycardia), severe tricuspid regurgitation, or atrial thrombus that could lead to potentially life-threatening thromboembolic complications.","definition_xrefs":["Orphanet:1677"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic cardiac malformation (obsolete MONDO:0018797)","termid":"MONDO:0018797"},{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial idiopathic dilatation of the right atrium","secondary_identifiers":["GARD:18735","MEDGEN:901482","SCTID:716773002","UMLS:C4274283"],"synonyms":[{"name":"familial idiopathic dilatation of the right atrium (disease)","type":"exact"}],"termid":"MONDO:0015666","xrefs":{"Monarch":{"xref_id":"0015666"}}}


id: GO:0045849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nurse cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nurse cell apoptotic process","termid":"GO:0045477"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in development","termid":"GO:1904746"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"nurse cell apoptotic process","termid":"GO:0045476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nurse cell apoptotic process","synonyms":[{"name":"down regulation of nurse cell apoptosis","type":"exact"},{"name":"down-regulation of nurse cell apoptosis","type":"exact"},{"name":"downregulation of nurse cell apoptosis","type":"exact"},{"name":"inhibition of nurse cell apoptosis","type":"narrow"},{"name":"negative regulation of nurse cell apoptosis","type":"narrow"}],"termid":"GO:0045849"}


id: GO:0033347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a tetrose, any monosaccharide with a chain of four carbon atoms in the molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"tetrose metabolic process","synonyms":[{"name":"tetrose metabolism","type":"exact"}],"termid":"GO:0033347"}


id: PBO:0073179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein K pseudogene 1","termid":"PBO:0073179"}


id: MONDO:0013212
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86829],"is_not":false,"summary":null,"term":"MONDO:0013212"}]},"cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2N (CMT2N) is a mild form of axonal Charcot-Marie-Tooth disease, a peripheral sensorimotor neuropathy, characterized by distal legs sensory loss and weakness that can be asymmetric. Tendon reflexes are reduced in the knees and absent in ankles. Progression is slow.","definition_xrefs":["Orphanet:228174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2N","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:719515001","MESH:C567653","MEDGEN:413754","DOID:0110177","GARD:12429","UMLS:C2750090","OMIM:613287"],"synonyms":[{"name":"AARS Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"CMT2N","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2 caused by mutation in AARS","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2N","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2N","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2N","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy axonal type 2N","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, axonal, type 2N","type":"related"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2N","type":"exact"},{"name":"autosomal dominant axonal Charcot-Marie-Tooth disease type 2N","type":"exact"}],"termid":"MONDO:0013212","terms_by_termid":{"MONDO:0013212":null},"xrefs":{"Monarch":{"xref_id":"0013212"}}}


id: GO:0102847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:3-2-16:2-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:3-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:3-2-16:2-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102847)","termid":"GO:0102847"}


id: PBO:0065690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentraxin 4","termid":"PBO:0065690"}


id: PBO:0003282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex assembly protein Cbp6 (predicted)","termid":"PBO:0003282"}


id: PBO:0076577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 5","termid":"PBO:0076577"}


id: PR:P78954
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif45 gene.","definition_xrefs":["UniProtKB:P78954","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.15","synonyms":[{"name":"Spom972h-tif45","type":"exact"},{"name":"eIF-4E-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF-4F 25 kDa subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF4E-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mRNA cap-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78954"}


id: PBO:0055476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2909","termid":"PBO:0055476"}


id: MONDO:0010806
data:
  {"annotated_genes":["SJAG_04497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86566],"is_not":false,"summary":null,"term":"MONDO:0010806"}]},"cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PRPF8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"PRPF8-related retinopathy","termid":"MONDO:0700234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:H35.5","OMIM:600059","MEDGEN:325486","MESH:C564008","UMLS:C1838702","DOID:0110403","GARD:10388"],"synonyms":[{"name":"PRPF8 retinitis pigmentosa","type":"exact"},{"name":"RP 13","type":"related"},{"name":"RP13","type":"exact"},{"name":"retinitis pigmentosa 13","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PRPF8","type":"exact"},{"name":"retinitis pigmentosa type 13","type":"exact"}],"termid":"MONDO:0010806","terms_by_termid":{"MONDO:0010806":null},"xrefs":{"Monarch":{"xref_id":"0010806"}}}


id: GO:0046031
data:
  {"annotated_genes":["SJAG_06621","SJAG_02107","SJAG_00027","SJAG_02038","SJAG_02009","SJAG_01310","SJAG_04495","SJAG_02796","SJAG_00685","SJAG_02135","SJAG_02785","SJAG_06622","SJAG_03828","SJAG_03903","SJAG_00839","SJAG_02369","SJAG_03373","SJAG_02945","SJAG_04334","SJAG_03660","SJAG_00605","SJAG_04048","SJAG_05314","SJAG_04192","SJAG_00461"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[109702,109703,78210,95352,106147,106146,109698,109699,109701,103954,116652,109697,105777,98590,109700,98318,94863,105778,105776,103698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[76377,73408],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[70420],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ADP, adenosine 5'-diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate metabolic process","termid":"GO:0009179"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"ADP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ADP metabolism","type":"exact"}],"termid":"GO:0046031","terms_by_termid":{"GO:0006110":null,"GO:0006172":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: PBO:0084060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP) for yeast Rab family members; involved in ER to Golgi trafficking; exhibits GAP activity toward Ypt1p that is stimulated by Gyl1p, also acts on Sec4p; interacts with Gyl1p, Rvs161p and Rvs167p; involved in recruiting Rvs167p to the bud tip during polarized growth; relocalizes from bud neck to cytoplasm upon DNA replication stress; GYP5 has a paralog, GYL1, that arose from the whole genome duplication","termid":"PBO:0084060"}


id: GO:0097753
data:
  {"annotated_genes":["SJAG_01848","SJAG_03795"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119552,119558],"is_not":false,"summary":null,"term":"GO:0097753"}]},"cv_name":"biological_process","definition":"A membrane organization process resulting in the bending of a membrane.","definition_xrefs":["GOC:krc","GOC:vw","GOC:pr","Wikipedia:Membrane_curvature"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01848":null,"SJAG_03795":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"membrane bending","references_by_uniquename":{"PMID:33495454":null},"synonyms":[{"name":"membrane curvature","type":"related"}],"termid":"GO:0097753","terms_by_termid":{"GO:0097753":null}}


id: MONDO:0015565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cap polyposis (CP) is a rare colorectal disease characterized by multiple inflammatory polyps that predominantly affect the rectosigmoid area and that manifests primarily as rectal bleeding with abnormal transit, constipation and diarrhea.","definition_xrefs":["Orphanet:160148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"cap polyposis","secondary_identifiers":["GARD:20038","icd11.foundation:1387262691","UMLS:C4303971","MEDGEN:929640","SCTID:720604008"],"synonyms":[{"name":"Cap inflammatory polyposis","type":"exact"},{"name":"eroded polypoid hyperplasia","type":"exact"},{"name":"inflammatory myoglandular polyps","type":"exact"},{"name":"polypoid prolapsing folds","type":"exact"}],"termid":"MONDO:0015565","xrefs":{"Monarch":{"xref_id":"0015565"}}}


id: MONDO:0030827
data:
  {"annotated_genes":["SJAG_02509","SJAG_04387"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87306,87307],"is_not":false,"summary":null,"term":"MONDO:0030827"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant macrothrombocytopenia","termid":"MONDO:0015372"},{"relation_name":"is_a","term_name":"macrothrombocytopenia, isolated","termid":"MONDO:0031447"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"macrothrombocytopenia, isolated, 2, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619840","UMLS:C5676968","MEDGEN:1802965"],"synonyms":[{"name":"MACTHC2","type":"exact"},{"name":"macrothrombocytopenia, isolated, 2, autosomal dominant","type":"exact"}],"termid":"MONDO:0030827","terms_by_termid":{"MONDO:0030827":null},"xrefs":{"Monarch":{"xref_id":"0030827"}}}


id: GO:1900657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of diorcinol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of diorcinol biosynthetic process","termid":"GO:1900655"},{"relation_name":"positively_regulates","term_name":"diorcinol biosynthetic process","termid":"GO:1900572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of diorcinol biosynthetic process","synonyms":[{"name":"activation of diorcinol anabolism","type":"exact"},{"name":"activation of diorcinol biosynthesis","type":"exact"},{"name":"activation of diorcinol biosynthetic process","type":"narrow"},{"name":"activation of diorcinol formation","type":"exact"},{"name":"activation of diorcinol synthesis","type":"exact"},{"name":"positive regulation of diorcinol anabolism","type":"exact"},{"name":"positive regulation of diorcinol biosynthesis","type":"exact"},{"name":"positive regulation of diorcinol formation","type":"exact"},{"name":"positive regulation of diorcinol synthesis","type":"exact"},{"name":"up regulation of diorcinol anabolism","type":"exact"},{"name":"up regulation of diorcinol biosynthesis","type":"exact"},{"name":"up regulation of diorcinol biosynthetic process","type":"exact"},{"name":"up regulation of diorcinol formation","type":"exact"},{"name":"up regulation of diorcinol synthesis","type":"exact"},{"name":"up-regulation of diorcinol anabolism","type":"exact"},{"name":"up-regulation of diorcinol biosynthesis","type":"exact"},{"name":"up-regulation of diorcinol biosynthetic process","type":"exact"},{"name":"up-regulation of diorcinol formation","type":"exact"},{"name":"up-regulation of diorcinol synthesis","type":"exact"},{"name":"upregulation of diorcinol anabolism","type":"exact"},{"name":"upregulation of diorcinol biosynthesis","type":"exact"},{"name":"upregulation of diorcinol biosynthetic process","type":"exact"},{"name":"upregulation of diorcinol formation","type":"exact"},{"name":"upregulation of diorcinol synthesis","type":"exact"}],"termid":"GO:1900657"}


id: PBO:0004272
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARC syndrome","termid":"PBO:0004272"}


id: PBO:0084099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor specific for Arf3p; localized to the bud neck and tip; required for localization of Arf3p to the bud neck and tip","termid":"PBO:0084099"}


id: GO:0032459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein oligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of protein oligomerization","termid":"GO:0032459"}


id: MONDO:0018122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digital anomalies-intellectual disability-short stature syndrome","secondary_identifiers":["Orphanet:352487"],"termid":"MONDO:0018122","xrefs":{"Monarch":{"xref_id":"0018122"}}}


id: MONDO:1012199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular squamous cell carcinoma, non-human animal","termid":"MONDO:1011812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ocular squamous cell carcinoma, sheep","secondary_identifiers":["OMIA:000735-9940"],"termid":"MONDO:1012199","xrefs":{"Monarch":{"xref_id":"1012199"}}}


id: GO:0032279
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of synapse occurring between an axon and a dendritic spine or dendritic shaft. Asymmetric synapses, the most abundant synapse type in the central nervous system, involve axons that contain predominantly spherical vesicles and contain a thickened postsynaptic density. Most or all synapses of this type are excitatory.","definition_xrefs":["GOC:ef","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron to neuron synapse","termid":"GO:0098984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"asymmetric synapse","synonyms":[{"name":"Gray's type I synapse","type":"exact"}],"termid":"GO:0032279"}


id: PBO:0041770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 10","termid":"PBO:0041770"}


id: MONDO:0014190
data:
  {"annotated_genes":["SJAG_00997","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86279,86280],"is_not":false,"summary":null,"term":"MONDO:0014190"}]},"cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the ELAC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:815856","Orphanet:369913","UMLS:C3809526","OMIM:615440","DOID:0111496","GARD:17589"],"synonyms":[{"name":"COXPD17","type":"exact"},{"name":"ELAC2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 17","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in ELAC2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 17","type":"exact"}],"termid":"MONDO:0014190","terms_by_termid":{"MONDO:0014190":null},"xrefs":{"Monarch":{"xref_id":"0014190"}}}


id: GO:0016699
data:
  {"annotated_genes":["SJAG_02497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008901"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.12.7.-","GO:0016736","GO:0019110"],"synonyms":[{"name":"oxidoreductase activity, acting on hydrogen as donor, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016699","terms_by_termid":{"GO:0008901":null}}


id: GO:0097650
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An incomplete microtubule containing 10 protofilaments that fuses with a complete microtubule called A tubule (containing 13 protofilaments) to form an axonemal outer doublet.","definition_xrefs":["GOC:cilia","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"B axonemal microtubule","synonyms":[{"name":"B tubule","type":"broad"}],"termid":"GO:0097650"}


id: GO:0032082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the rate of type III restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of type III site-specific deoxyribonuclease activity (obsolete GO:0032082)","synonyms":[{"name":"down regulation of type III restriction endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of type III restriction endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of type III restriction endodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of type III restriction endodeoxyribonuclease activity","type":"narrow"},{"name":"negative regulation of type III restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type III restriction endodeoxyribonuclease inhibitor","type":"related"},{"name":"type III restriction enzyme inhibitor","type":"related"}],"termid":"GO:0032082"}


id: MONDO:0005488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A scoliosis with no known cause arising in adolescent.","definition_xrefs":["EFO:0005423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic scoliosis","termid":"MONDO:0000726"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adolescent idiopathic scoliosis","secondary_identifiers":["Orphanet:3153","MEDGEN:450543","SCTID:203646004","UMLS:C0410702"],"termid":"MONDO:0005488","xrefs":{"Monarch":{"xref_id":"0005488"}}}


id: GO:0007097
data:
  {"annotated_genes":["SJAG_00594","SJAG_03073","SJAG_02509","SJAG_02737","SJAG_00140","SJAG_02431","SJAG_01613","SJAG_02651","SJAG_00397","SJAG_04597","SJAG_00368","SJAG_03673","SJAG_04003","SJAG_01662","SJAG_03835","SJAG_01370","SJAG_01863","SJAG_04001","SJAG_03264","SJAG_02561","SJAG_04143","SJAG_00113","SJAG_04387","SJAG_02286","SJAG_02045","SJAG_05185"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104860,105189,113076],"is_not":false,"summary":null,"term":"GO:0007097"},{"annotations":[117243,88098,101048,97902,91334,95543,92183,91725,103279,103571,111361,111710,114252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[101750,106905,111534],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[71024,107740,101761,109917,114254,117247,75473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[97977,99557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[97904,99558,91727,76700,88102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[94752],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"The directed movement of the nucleus to a specific location within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"nucleus localization","termid":"GO:0051647"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02651":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04143":null,"SJAG_04387":null,"SJAG_04597":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"nuclear migration","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0040023"],"synonyms":[{"name":"establishment of cell nucleus localization","type":"related"},{"name":"establishment of localization of nucleus","type":"related"},{"name":"establishment of nucleus localisation","type":"related"},{"name":"establishment of nucleus localization","type":"related"},{"name":"establishment of position of nucleus","type":"exact"},{"name":"nuclear movement","type":"exact"},{"name":"nuclear positioning","type":"exact"},{"name":"nucleus migration","type":"exact"},{"name":"nucleus positioning","type":"exact"},{"name":"positioning of nucleus","type":"exact"}],"termid":"GO:0007097","terms_by_termid":{"GO:0000743":null,"GO:0007097":null,"GO:0030989":null,"GO:0032118":null,"GO:0090561":null,"GO:0098863":null,"GO:1902854":null}}


id: SO:1000186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000186 sequence_variant_causing_cryptic_splice_donor_activation (obsolete SO:1000186)","synonyms":[{"name":"sequence variant causing cryptic splice donor activation","type":"exact"}],"termid":"SO:1000186"}


id: PBO:0052404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 5A","termid":"PBO:0052404"}


id: PBO:0065158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 8","termid":"PBO:0065158"}


id: FYPO:0007110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain fewer microtubule bundles associated with the spindle pole body than normal during meiosis I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundles present in decreased numbers","termid":"FYPO:0002818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0002399","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"microtubule bundles present in decreased numbers at spindle pole body during meiosis I","synonyms":[{"name":"decreased level of MT bundles at spindle pole body during meiosis I","type":"exact"},{"name":"decreased number of microtubule bundles at spindle pole body during meiosis I","type":"exact"},{"name":"meiosis I SPB microtubule bundles present in decreased numbers","type":"exact"},{"name":"microtubule bundles present in decreased numbers at SPB during meiosis I","type":"exact"},{"name":"microtubule bundles present in lower numbers at spindle pole body during meiosis I","type":"exact"},{"name":"microtubule bundles present in reduced numbers at spindle pole body during meiosis I","type":"exact"}],"termid":"FYPO:0007110"}


id: PBO:0057963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3684","termid":"PBO:0057963"}


id: MONDO:0971063
data:
  {"annotated_genes":["SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"}]},"cv_name":"mondo","definition":"A rare neurometabolic disorder characterized by childhood-onset dystonia that shows a dramatic and sustained response to low doses of levodopa (L-dopa) and that may be associated with parkinsonism at an older age.","definition_xrefs":["Orphanet:98808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopa-responsive dystonia","termid":"MONDO:0016812"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0003441"],"is_obsolete":false,"name":"autosomal dominant dopa-responsive dystonia","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0971063","terms_by_termid":{"MONDO:0007495":null},"xrefs":{"Monarch":{"xref_id":"0971063"}}}


id: PBO:0080722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT1 transcription factor","termid":"PBO:0080722"}


id: PBO:0074134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 34 member 2","termid":"PBO:0074134"}


id: MONDO:0008942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebelloparenchymal disorder II (obsolete MONDO:0008942)","termid":"MONDO:0008942","xrefs":{"Monarch":{"xref_id":"0008942"}}}


id: MONDO:0013672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 15","termid":"MONDO:0016913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15q25 deletion syndrome","secondary_identifiers":["OMIM:614294","UMLS:C3280355","DOID:0060396","MEDGEN:481985"],"synonyms":[{"name":"chromosome 15q25 deletion syndrome","type":"exact"}],"termid":"MONDO:0013672","xrefs":{"Monarch":{"xref_id":"0013672"}}}


id: PBO:0074224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 45 member 3","termid":"PBO:0074224"}


id: PBO:0034247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_marker_for","termid":"PBO:0034247"}


id: GO:0032118
data:
  {"annotated_genes":["SJAG_04143","SJAG_00368","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101750,106905,111534],"is_not":false,"summary":null,"term":"GO:0032118"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the horsetail-astral array, a structure of astral microtubules that emanates from the spindle pole body during meiosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"dynein-driven meiotic oscillatory nuclear movement","termid":"GO:0030989"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_03073":null,"SJAG_04143":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0000226","GO:0006810","GO:0008150","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"horsetail-astral microtubule organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"horsetail-astral microtubule array organization","type":"exact"},{"name":"horsetail-astral microtubule organisation","type":"exact"},{"name":"horsetail-astral microtubule organization and biogenesis","type":"related"}],"termid":"GO:0032118","terms_by_termid":{"GO:0032118":null}}


id: PBO:0081590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF516 divergent transcript","termid":"PBO:0081590"}


id: FYPO:0005416
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during anaphase of the second meiotic nuclear division is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during meiosis II","termid":"FYPO:0005414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during meiotic anaphase II","synonyms":[{"name":"increased protein accumulation during meiotic anaphase II","type":"related"},{"name":"increased protein level during second meiotic anaphase","type":"exact"}],"termid":"FYPO:0005416"}


id: GO:1901636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of presynaptic active zone structure.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of maintenance of presynaptic active zone structure (obsolete GO:1901636)","synonyms":[{"name":"down regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"down-regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"downregulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"inhibition of maintenance of presynaptic active zone structure","type":"narrow"},{"name":"negative regulation of maintenance of presynaptic active zone structure","type":"exact"}],"termid":"GO:1901636"}


id: MONDO:0005656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with nematodes of the order ascaridida.","definition_xrefs":["MESH:D017191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ascaridida infectious disease","synonyms":[{"name":"Ascaridida caused disease or disorder","type":"exact"},{"name":"Ascaridida disease or disorder","type":"exact"},{"name":"Ascaridida infection","type":"related"},{"name":"infection, Ascaridida","type":"related"},{"name":"infections, Ascaridida","type":"related"}],"termid":"MONDO:0005656","xrefs":{"Monarch":{"xref_id":"0005656"}}}


id: PBO:0056441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 14","termid":"PBO:0056441"}


id: FYPO:0005454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere assembly, i.e. the aggregation, arrangement and bonding together of a set of components to form a telomere at a double-stranded DNA end, is abnormal.","definition_xrefs":["PomBase:mah","GO:0032202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"abnormal telomere assembly","synonyms":[{"name":"abnormal telomere assembly during mitotic cell cycle","type":"related"},{"name":"abnormal telomere assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005454"}


id: GO:0050620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3Z)-phycocyanobilin + oxidized ferredoxin = biliverdin IXa + reduced ferredoxin.","definition_xrefs":["EC:1.3.7.5","MetaCyc:1.3.7.5-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","termid":"GO:0016636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phycocyanobilin:ferredoxin oxidoreductase activity","secondary_identifiers":["RHEA:15309"],"synonyms":[{"name":"(3Z)-phycocyanobilin:ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0050620"}


id: GO:0080120
data:
  {"annotated_genes":["SJAG_00730","SJAG_03396"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75302,70486],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071586"}]},"cv_name":"biological_process","definition":"A series of specific posttranslational modifications to the CAAX box region of CAAX box proteins. CAAX box proteins are eukaryotic proteins that contain a CAAX motif where the C is a cysteine, the two A residues are aliphatic amino acids and the X can be one of several amino acids. The CAAX-box proteins undergo three sequential, enzymatic, post-translational modifications essential to their targeting: First, the proteins are prenylated by one of two prenyltransferases called farnesyltransferase and geranylgeranyltransferase-I. Prenylation results in the covalent attachment of either farnesyl or geranylgeranyl isoprenoid groups to the cysteine in the CAAX box motif. Prenylation is followed by proteolytic removal of the last three amino acids of the protein (AAX). Finally, the newly exposed carboxylate group of the isoprenylcysteine is methylated by an ER-associated prenyl-dependent carboxylmethyltransferase.","definition_xrefs":["PMID:17114793","PMID:18641086","PMID:12039957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00730":null,"SJAG_03396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"CAAX-box protein maturation","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"CAAX-box protein processing","type":"related"},{"name":"farnesylated protein maturation","type":"related"}],"termid":"GO:0080120","terms_by_termid":{"GO:0071586":null}}


id: GO:0098813
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id: PATO:0000924
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id: PR:O13339-2
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id: PBO:0049557
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id: PBO:0044089
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id: GO:1990685
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id: MONDO:0020372
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id: PBO:0064535
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id: GO:0050852
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id: PBO:0055642
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id: MONDO:0019353
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id: PBO:0055094
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id: PBO:0030311
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id: FYPO:0006128
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id: MONDO:0010731
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id: GO:0016817
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id: MONDO:0000019
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id: GO:1900166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glial cell-derived neurotrophic factor production.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"glial cell-derived neurotrophic factor production","termid":"GO:0044467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of glial cell-derived neurotrophic factor production","synonyms":[{"name":"regulation of GDNF secretion","type":"narrow"},{"name":"regulation of glial cell line-derived neurotrophic factor secretion","type":"related"},{"name":"regulation of glial cell-derived neurotrophic factor secretion","type":"narrow"}],"termid":"GO:1900166"}


id: MONDO:0002472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising in a pre-existing pleomorphic adenoma. It most often occurs in the parotid gland and less often in the submandibular gland and minor salivary gland. Patients usually present with a history of a long-standing mass which recently had undergone rapid growth. The prognosis depends on the invasiveness of the malignant component. Patients with non-invasive or minimally invasive tumors usually have a good prognosis following surgical resection. Invasive tumors are usually aggressive and are associated with recurrences and metastases.","definition_xrefs":["NCIT:C4397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoepithelial tumor","termid":"MONDO:0002380"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"carcinoma ex pleomorphic adenoma","secondary_identifiers":["ICDO:8941/3","MEDGEN:87486","UMLS:C0344460"],"synonyms":[{"name":"carcinoma ex pleomorphic adenoma","type":"exact"},{"name":"carcinoma ex pleomorphic adenoma (morphologic abnormality)","type":"exact"},{"name":"carcinoma in pleomorphic adenoma","type":"exact"}],"termid":"MONDO:0002472","xrefs":{"Monarch":{"xref_id":"0002472"}}}


id: PBO:0012275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex subunit, Far11/Csc2","termid":"PBO:0012275"}


id: PBO:0004467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Ndc80","termid":"PBO:0004467"}


id: PBO:0054069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1416","termid":"PBO:0054069"}


id: GO:0099540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by a peptide ligand crossing the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"},{"relation_name":"is_a","term_name":"synaptic signaling via neuropeptide","termid":"GO:0099538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by neuropeptide","termid":"GO:0099540"}


id: GO:0045716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of low-density lipoprotein receptors.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of low-density lipoprotein particle receptor biosynthetic process (obsolete GO:0045716)","synonyms":[{"name":"activation of low-density lipoprotein receptor biosynthetic process","type":"narrow"},{"name":"positive regulation of low-density lipoprotein receptor anabolism","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor biosynthesis","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor formation","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor synthesis","type":"exact"},{"name":"stimulation of low-density lipoprotein receptor biosynthetic process","type":"narrow"},{"name":"up regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"up-regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"upregulation of low-density lipoprotein receptor biosynthetic process","type":"exact"}],"termid":"GO:0045716"}


id: PBO:0083605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps 3' end of essential RPL28 gene encoding a large subunit ribosomal protein","termid":"PBO:0083605"}


id: FYPO:0003618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing aculeacin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on aculeacin A","synonyms":[{"name":"normal cell population growth in presence of aculeacin A","type":"exact"},{"name":"normal cell population growth on aculeacin A","type":"exact"},{"name":"normal cellular response to aculeacin A","type":"related"},{"name":"normal vegetative cell population growth on aculeacin A","type":"exact"}],"termid":"FYPO:0003618"}


id: GO:0006211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of 5-methylcytosine, a methylated base of DNA.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-methylcytosine catabolic process (obsolete GO:0006211)","synonyms":[{"name":"5-methylcytosine breakdown","type":"exact"},{"name":"5-methylcytosine catabolism","type":"exact"},{"name":"5-methylcytosine degradation","type":"exact"}],"termid":"GO:0006211"}


id: PBO:0060217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MX dynamin like GTPase 1","termid":"PBO:0060217"}


id: GO:0060277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stop, prevents or decreases transcription as part of the G1 phase of the mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription involved in G1 phase of mitotic cell cycle (obsolete GO:0060277)","synonyms":[{"name":"negative regulation of transcription from RNA polymerase II promoter during G1 phase of mitotic cell cycle","type":"related"},{"name":"negative regulation of transcription involved in G1 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0060277"}


id: FYPO:0008114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to amiloride. Cells stop growing (and may die) at a concentration of amiloride that allows wild type cells to grow.","definition_xrefs":["PMID:15537393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to amiloride","termid":"FYPO:0008114"}


id: PR:O43125
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein csh3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.05c","synonyms":[{"name":"Spom972h-lsb1","type":"exact"}],"termid":"PR:O43125"}


id: MONDO:0971058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare bacterial infectious disease characterized by development of endothelial cell-derived, blood-filled tumors on the surface of the skin during the chronic phase of infection with Bartonella bacilliformis. The lesions can persist for months to years and may cause pain and scarring due to ulceration. They are classified as miliary (multiple red papules of <3 mm in diameter), mular (blood-filled nodules), and diffuse (groups of subdermal nodules >5 mm in diameter). Eruptions may be accompanied by fever and malaise, lymphadenopathy, acute bone and joint pains, and headache. Fatality rates during this phase are low.","definition_xrefs":["Orphanet:659759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Oroya fever","termid":"MONDO:0018984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"verruga peruana","secondary_identifiers":["MEDGEN:21848","UMLS:C0042552"],"termid":"MONDO:0971058","xrefs":{"Monarch":{"xref_id":"0971058"}}}


id: PBO:0049479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.3 linker histone, cluster member","termid":"PBO:0049479"}


id: PBO:0075918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 10","termid":"PBO:0075918"}


id: GO:1902875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of embryonic pattern specification.","definition_xrefs":["PMID:16872597","GOC:mr","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"embryonic pattern specification","termid":"GO:0009880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic pattern specification","synonyms":[{"name":"regulation of embryonic pattern biosynthesis","type":"broad"},{"name":"regulation of embryonic pattern formation","type":"broad"},{"name":"regulation of ventral/lateral system","type":"related"}],"termid":"GO:1902875"}


id: GO:0001897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a symbiont that results in the death of a host cell by means of the rupture of cell membranes and the loss of cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:11423190","PMID:23748204","PMID:24204713","PMID:27405240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated killing of host cell","termid":"GO:0001907"},{"relation_name":"is_a","term_name":"cytolysis in another organism","termid":"GO:0051715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated cytolysis of host cell","synonyms":[{"name":"cytolysis by organism of host cells","type":"exact"},{"name":"cytolysis by symbiont of host cells","type":"exact"},{"name":"pathogenesis","type":"related"}],"termid":"GO:0001897"}


id: MONDO:0019655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sporadic idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"sporadic idiopathic steroid-resistant nephrotic syndrome with focal segmental hyalinosis","secondary_identifiers":["Orphanet:93218"],"synonyms":[{"name":"sporadic idiopathic steroid-resistant nephrotic syndrome with focal segmental glomerulosclerosis","type":"exact"}],"termid":"MONDO:0019655","xrefs":{"Monarch":{"xref_id":"0019655"}}}


id: FYPO:0008090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic anaphase begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle phase","termid":"FYPO:0003833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal onset of mitotic anaphase B","termid":"FYPO:0008090"}


id: GO:0004739
data:
  {"annotated_genes":["SJAG_03064","SJAG_02006"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73112,79414],"is_not":false,"summary":null,"term":"GO:0004739"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2.","definition_xrefs":["EC:1.2.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase activity","termid":"GO:0004738"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor","termid":"GO:0016624"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02006":null,"SJAG_03064":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pyruvate dehydrogenase (acetyl-transferring) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:19189","MetaCyc:RXN0-1134","Reactome:R-HSA-9861734"],"synonyms":[{"name":"MtPDC (mitochondrial pyruvate dehydogenase complex) activity","type":"narrow"},{"name":"PDH","type":"related"},{"name":"pyruvate dehydrogenase (lipoamide) activity","type":"exact"},{"name":"pyruvate dehydrogenase complex activity","type":"related"},{"name":"pyruvate:dihydrolipoyllysine-residue acetyltransferase-lipoyllysine 2-oxidoreductase (decarboxylating, acceptor-acetylating)","type":"related"},{"name":"pyruvate:lipoamide 2-oxidoreductase (decarboxylating and acceptor-acetylating) activity","type":"related"}],"termid":"GO:0004739","terms_by_termid":{"GO:0004739":null}}


id: PBO:0041947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 7","termid":"PBO:0041947"}


id: PBO:0072259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 34","termid":"PBO:0072259"}


id: GO:0033561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the rate or extent of water loss from an organism via the skin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of water loss via skin (obsolete GO:0033561)","synonyms":[{"name":"skin barrier function","type":"related"}],"termid":"GO:0033561"}


id: MONDO:0015422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Orofaciodigital syndrome type 13 is a rare subtype of orofaciodigital syndrome, with sporadic occurrence, characterized by cardiac (mitral and tricuspid valve dysplasia) and neuropsychiatric manifestations (epilepsy, depression), in addition to oral, facial and digital malformations (lingual hamartomas, cleft lip, and brachydactyly, clinodactyly, syndactyly of hands and feet). Leukoaraiosis, on brain MRI examination, is also associated.","definition_xrefs":["Orphanet:141330"],"gene_count":0,"genotype_count":0,"name":"obsolete orofaciodigital syndrome type 13 (obsolete MONDO:0015422)","secondary_identifiers":["UMLS:C2932680","MEDGEN:420203","MESH:C548035","SCTID:763835004","GARD:10694"],"synonyms":[{"name":"Degner syndrome","type":"exact"},{"name":"OFD syndrome 13","type":"related"},{"name":"OFD13","type":"exact"},{"name":"OFDS 13","type":"related"},{"name":"oral facial digital syndrome 13","type":"related"},{"name":"oral facial digital syndrome type 13","type":"related"},{"name":"oral-facial-digital syndrome 13","type":"related"},{"name":"oral-facial-digital syndrome XIII","type":"related"},{"name":"oral-facial-digital syndrome type 13","type":"exact"},{"name":"orofaciodigital syndrome 13","type":"related"},{"name":"orofaciodigital syndrome XIII","type":"related"}],"termid":"MONDO:0015422","xrefs":{"Monarch":{"xref_id":"0015422"}}}


id: PR:Q9P7Z3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methyltransferase-like protein 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12843:SF0","OMA:SCHPO02530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-lysine N-methyltransferase efm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.14c","secondary_identifiers":["UniProtKB:Q9P7Z3"],"synonyms":[{"name":"Spom972h-METTL10","type":"exact"},{"name":"elongation factor methyltransferase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"secretion and early endocytosis protein 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7Z3"}


id: MONDO:0015582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of pregnancy disorder that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare disorder related with pregnancy, childbirth and puerperium (obsolete MONDO:0015582)","secondary_identifiers":["Orphanet:163637"],"synonyms":[{"name":"rare pregnancy disorder","type":"exact"}],"termid":"MONDO:0015582","xrefs":{"Monarch":{"xref_id":"0015582"}}}


id: FYPO:0004721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which minus-end specific microtubule depolymerization, i.e. the removal of tubulin dimers from the minus end of a microtubule, occurs at a lower rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0036078"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased rate of microtubule depolymerization at minus end (obsolete FYPO:0004721)","synonyms":[{"name":"decreased microtubule depolymerization rate at minus end","type":"exact"},{"name":"decreased microtubule minus end shrinkage","type":"related"},{"name":"decreased rate of microtubule catastrophe at minus end","type":"related"},{"name":"decreased rate of microtubule depolymerisation at minus end","type":"exact"},{"name":"decreased rate of microtubule depolymerization at minus end during mitotic cell cycle","type":"related"},{"name":"decreased rate of microtubule depolymerization at minus end during vegetative growth","type":"exact"},{"name":"decreased rate of minus-end specific microtubule depolymerization","type":"exact"},{"name":"increased microtubule stability","type":"related"},{"name":"reduced rate of microtubule depolymerization at minus end","type":"exact"}],"termid":"FYPO:0004721"}


id: PBO:0065640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 18","termid":"PBO:0065640"}


id: CHEBI:30351
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,2'-bipyridine","synonyms":[{"name":"2,2-dipyridyl","type":"exact"}],"termid":"CHEBI:30351"}


id: MONDO:0014771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the KIAA0556 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 26","secondary_identifiers":["UMLS:C4084843","DOID:0110995","GARD:16160","MEDGEN:900415","OMIM:616784"],"synonyms":[{"name":"JBTS26","type":"exact"},{"name":"Joubert syndrome 26","type":"exact"},{"name":"Joubert syndrome caused by mutation in KIAA0556","type":"exact"},{"name":"Joubert syndrome type 26","type":"exact"},{"name":"KIAA0556 Joubert syndrome","type":"exact"}],"termid":"MONDO:0014771","xrefs":{"Monarch":{"xref_id":"0014771"}}}


id: PBO:0011072
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in archaea","termid":"PBO:0011072"}


id: PBO:0002855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA exonuclease Rrp17 (predicted)","termid":"PBO:0002855"}


id: GO:0052365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of xylan within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont xylan (obsolete GO:0052365)","termid":"GO:0052365"}


id: GO:0030078
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Light harvesting complex associated with the reaction complex of photosynthetic purple bacteria.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane light-harvesting complex","termid":"GO:0030077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"light-harvesting complex, core complex","termid":"GO:0030078"}


id: GO:0003851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acylsphing-4-enine + UDP-alpha-D-galactose = a beta-D-galactosyl-(1<->1')-N-acylsphing-4-enine + H+ + UDP.","definition_xrefs":["EC:2.4.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"N-acylsphingosine galactosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.47-RXN","Reactome:R-HSA-6785933","RHEA:13093"],"synonyms":[{"name":"2-hydroxyacylsphingosine 1-beta-galactosyltransferase activity","type":"exact"}],"termid":"GO:0003851"}


id: PBO:0062774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily A member 1","termid":"PBO:0062774"}


id: FYPO:0001188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to Calcofluor White. Cells stop growing (and may die) at a concentration of Calcofluor White that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to Calcofluor White","synonyms":[{"name":"hypersensitive to Calcofluor White","type":"exact"},{"name":"sensitive to Calcofluor White during mitotic cell cycle","type":"related"},{"name":"sensitive to Calcofluor White during vegetative growth","type":"exact"}],"termid":"FYPO:0001188"}


id: GO:0097399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-32 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ic","PMID:21602493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-32","termid":"GO:0097397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-32-mediated signaling pathway","synonyms":[{"name":"IL-32-mediated signaling pathway","type":"exact"},{"name":"IL-32-mediated signalling pathway","type":"exact"},{"name":"interleukin-32-mediated signalling pathway","type":"exact"}],"termid":"GO:0097399"}


id: PBO:0043851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3d receptor 2","termid":"PBO:0043851"}


id: MONDO:0859318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 1","termid":"MONDO:0019161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism, type IB3, autosomal recessive","secondary_identifiers":["OMIM:620126","MEDGEN:1824029","UMLS:C5774256"],"termid":"MONDO:0859318","xrefs":{"Monarch":{"xref_id":"0859318"}}}


id: PBO:0040333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 8","termid":"PBO:0040333"}


id: GO:0035470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of angiogenesis","termid":"GO:0045766"},{"relation_name":"is_a","term_name":"regulation of vascular wound healing","termid":"GO:0061043"},{"relation_name":"is_a","term_name":"positive regulation of wound healing","termid":"GO:0090303"},{"relation_name":"positively_regulates","term_name":"vascular wound healing","termid":"GO:0061042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular wound healing","termid":"GO:0035470"}


id: GO:0070543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a linoleic acid stimulus.","definition_xrefs":["GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to linoleic acid","synonyms":[{"name":"response to linoleate","type":"exact"}],"termid":"GO:0070543"}


id: PBO:0052909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 13-1","termid":"PBO:0052909"}


id: GO:0051282
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the binding or confining calcium ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"sequestering of calcium ion","termid":"GO:0051208"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sequestering of calcium ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of calcium ion (Ca2+) retention","type":"exact"},{"name":"regulation of calcium ion (Ca2+) sequestering","type":"exact"},{"name":"regulation of calcium ion (Ca2+) sequestration","type":"exact"},{"name":"regulation of calcium ion (Ca2+) storage","type":"exact"},{"name":"regulation of retention of calcium ion (Ca2+)","type":"exact"},{"name":"regulation of sequestering of calcium ion (Ca2+)","type":"exact"},{"name":"regulation of sequestration of calcium ion (Ca2+)","type":"exact"},{"name":"regulation of storage of calcium ion (Ca2+)","type":"exact"}],"termid":"GO:0051282","terms_by_termid":{"GO:0061454":null}}


id: PBO:0079919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase hinge protein pseudogene 4","termid":"PBO:0079919"}


id: MONDO:0015598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrodermatitis continua suppurativa of Hallopeau (obsolete MONDO:0015598)","termid":"MONDO:0015598","xrefs":{"Monarch":{"xref_id":"0015598"}}}


id: PBO:0045294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 46","termid":"PBO:0045294"}


id: PBO:0044663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 5","termid":"PBO:0044663"}


id: PBO:0001554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 beta subunit (predicted)","termid":"PBO:0001554"}


id: MOD:01951
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamine residue and an L-serine residue by an ester bond and releasing ammonia to form O-(L-isoglutamyl)-L-serine.","definition_xrefs":["RESID:AA0597#QSX","PubMed:17051152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"O-(L-isoglutamyl)-L-serine","termid":"MOD:01977"},{"relation_name":"is_a","term_name":"crosslinked L-glutamine residue","termid":"MOD:02046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoglutamyl)-L-serine (Gln-Ser)","synonyms":[{"name":"(2S)-2-amino-5-[(2S)-2-amino-2-carboxyethoxy]-5-oxopentanoic acid","type":"exact"},{"name":"O(beta)-(gamma-glutamyl)serine","type":"exact"},{"name":"O-(L-isoglutamyl)-L-serine","type":"exact"},{"name":"O3-(isoglutamyl)-serine","type":"exact"}],"termid":"MOD:01951"}


id: PBO:0085253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein of peroxisomes; involved in peroxisomal inheritance; recruitment to peroxisomes is mediated by interaction with Pex3p at the peroxisomal membrane; Inp1p and Pex3p tether peroxisomes to plasma membrane","termid":"PBO:0085253"}


id: MONDO:1012406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic myelogenous leukemia, non-human animal","termid":"MONDO:1011819"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic myelogenous leukemia, pig","secondary_identifiers":["OMIA:001513-9823"],"termid":"MONDO:1012406","xrefs":{"Monarch":{"xref_id":"1012406"}}}


id: PBO:0038490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 1","termid":"PBO:0038490"}


id: FYPO:0002622
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of malate dehydrogenase (decarboxylating) (NAD+) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal malate dehydrogenase (decarboxylating) (NAD+) activity","termid":"FYPO:0002621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased malate dehydrogenase (decarboxylating) (NAD+) activity","synonyms":[{"name":"decreased 'malic' enzyme activity","type":"related"},{"name":"decreased (S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"decreased NAD-linked malic enzyme activity","type":"related"},{"name":"decreased NAD-malic enzyme activity","type":"broad"},{"name":"decreased NAD-specific malic enzyme activity","type":"related"},{"name":"decreased malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"reduced malate dehydrogenase (decarboxylating) (NAD+) activity","type":"exact"}],"termid":"FYPO:0002622"}


id: PBO:0072416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 21","termid":"PBO:0072416"}


id: FYPO:0006992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the right outer repeat region (otr1R) of the centromere is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:26518661","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing at centromere outer repeat","termid":"FYPO:0004742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal chromatin silencing at centromere otr1R","synonyms":[{"name":"normal centromere outer repeat region chromatin silencing at otr1R","type":"exact"},{"name":"normal chromatin silencing at centromere otr1R during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at centromere otr1R during vegetative growth","type":"exact"},{"name":"normal chromatin silencing at centromere otr1R region","type":"exact"},{"name":"normal chromatin silencing at centromeric otr1R","type":"exact"},{"name":"normal chromatin silencing at pericentric region otr1R","type":"related"},{"name":"normal chromatin silencing at pericentromeric region otr1R","type":"related"},{"name":"normal heterochromatic silencing at centromere otr1R","type":"exact"},{"name":"normal heterochromatin silencing at centromere otr1R","type":"exact"}],"termid":"FYPO:0006992"}


id: PBO:0030675
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_septation_index","termid":"PBO:0030675"}


id: FYPO:0002931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which polyadenylated RNA molecules have poly(A) tails of that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal poly(A) tail length","termid":"FYPO:0002929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002929"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002929"],"is_obsolete":false,"name":"increased poly(A) tail length","synonyms":[{"name":"increased polyA sequence length","type":"exact"},{"name":"increased polyA tail length","type":"exact"},{"name":"long poly(a) tails","type":"exact"}],"termid":"FYPO:0002931"}


id: MONDO:0008552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited blood coagulation disease characterized by autosomal dominant inheritance with macrothrombocytopenia, platelet anisocytosis, prolonged bleeding time but only mildly increased bleeding tendency that has material basis in heterozygous mutation in the ITGA2B gene on chromosome 17q21.31 or the ITGB3 gene on chromosome 17q21.32.","definition_xrefs":["DOID:0060691","PMID:21454453","PMID:18065693","PMID:9834222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 16","secondary_identifiers":["UMLS:C5442010","MEDGEN:1781222","MESH:C566061","OMIM:187800"],"synonyms":[{"name":"BDPLT16","type":"related"},{"name":"Glanzmann thrombasthenia, autosomal dominant","type":"related"},{"name":"autosomal dominant Glanzmann thrombasthenia","type":"exact"},{"name":"autosomal dominant thrombasthenia of Glanzmann and Naegeli","type":"exact"},{"name":"bleeding disorder, platelet-type, 16","type":"related"},{"name":"bleeding disorder, platelet-type, 16, autosomal dominant","type":"exact"},{"name":"platelet-type bleeding disorder 16","type":"exact"},{"name":"thrombasthenia of Glanzmann and Naegeli, autosomal dominant","type":"related"}],"termid":"MONDO:0008552","xrefs":{"Monarch":{"xref_id":"0008552"}}}


id: PR:P0CT59
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2202 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S22-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.01","synonyms":[{"name":"Spom972h-rps2202","type":"exact"}],"termid":"PR:P0CT59"}


id: FYPO:0002056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial translation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation","termid":"FYPO:0001798"},{"relation_name":"is_a","term_name":"abnormal mitochondrial translation","termid":"FYPO:0004528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitochondrial translation","synonyms":[{"name":"decreased mitochondrial protein biosynthesis","type":"exact"},{"name":"decreased mitochondrial protein synthesis","type":"exact"},{"name":"decreased mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial translation during vegetative growth","type":"exact"},{"name":"decreased rate of mitochondrial protein synthesis","type":"related"},{"name":"reduced mitochondrial translation","type":"exact"}],"termid":"FYPO:0002056"}


id: PBO:0090453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup131","termid":"PBO:0090453"}


id: PBO:0049809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDAC2 and HS3ST5 antisense RNA 2","termid":"PBO:0049809"}


id: PBO:0073468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sideroflexin 4","termid":"PBO:0073468"}


id: PBO:0034160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_pro-orthology_relationship_with","termid":"PBO:0034160"}


id: GO:1905835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pyrimidine ribonucleotide stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22065602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to pyrimidine ribonucleotide","termid":"GO:1905834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to pyrimidine ribonucleotide","termid":"GO:1905835"}


id: GO:0000259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose (a deoxyribonucleotide) within a cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular nucleoside transmembrane transporter activity (obsolete GO:0000259)","synonyms":[{"name":"intracellular nucleoside transmembrane transporter activity","type":"exact"}],"termid":"GO:0000259"}


id: MONDO:0024290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An elimination disorder characterized by urinary incontinence, whether involuntary or intentional, which is not due to a medical condition and which occurs at or beyond an age at which continence is expected (usually 5 years).","definition_xrefs":["NCIT:C34588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychiatric disorder","termid":"MONDO:0002025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enuresis","secondary_identifiers":["MEDGEN:8649","UMLS:C0014394","icd11.foundation:1157749237","MESH:D004775"],"synonyms":[{"name":"enuresis","type":"exact"}],"termid":"MONDO:0024290","xrefs":{"Monarch":{"xref_id":"0024290"}}}


id: GO:0046850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bone remodeling, the processes of bone formation and resorption that combine to maintain skeletal integrity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"bone remodeling","termid":"GO:0046849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bone remodeling","synonyms":[{"name":"regulation of bone remodelling","type":"exact"}],"termid":"GO:0046850"}


id: MONDO:0010682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myoclonic epilepsy, progressive, X-linked (obsolete MONDO:0010682)","secondary_identifiers":["OMIM:310370"],"synonyms":[{"name":"myoclonic epilepsy, progressive","type":"exact"}],"termid":"MONDO:0010682","xrefs":{"Monarch":{"xref_id":"0010682"}}}


id: SO:0001544
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript processing variant whereby the process of editing is disrupted with respect to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_processing_variant","termid":"SO:0001543"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"editing_variant","synonyms":[{"name":"editing variant","type":"exact"}],"termid":"SO:0001544"}


id: MONDO:0024973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cattle disease of uncertain cause, probably an allergic reaction.","definition_xrefs":["MESH:D011016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine respiratory disease complex","termid":"MONDO:0005678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia, atypical interstitial, of cattle","synonyms":[{"name":"Adenomatoses, bovine pulmonary","type":"related"},{"name":"Fog fever","type":"related"},{"name":"adenomatosis, bovine pulmonary","type":"related"},{"name":"adenomatosis, pulmonary, bovine","type":"related"},{"name":"atypical interstitial pneumonia of cattle","type":"related"},{"name":"bovine pulmonary Adenomatoses","type":"related"},{"name":"bovine pulmonary adenomatosis","type":"related"},{"name":"emphysema, acute bovine pulmonary","type":"related"},{"name":"fever, Fog","type":"related"},{"name":"pulmonary Adenomatoses, bovine","type":"related"},{"name":"pulmonary adenomatosis, bovine","type":"related"}],"termid":"MONDO:0024973","xrefs":{"Monarch":{"xref_id":"0024973"}}}


id: PBO:0043098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 10","termid":"PBO:0043098"}


id: GO:0044092
data:
  {"annotated_genes":["SJAG_04887","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95626,105471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that stops or reduces the rate or extent of a molecular function, an elemental biological activity occurring at the molecular level, such as catalysis or binding.","definition_xrefs":["GO:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of molecular function","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044092","terms_by_termid":{"GO:1904530":null}}


id: GO:0004692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"cGMP dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide-dependent protein kinase activity","termid":"GO:0004690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0004672","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"cGMP-dependent protein kinase activity","secondary_identifiers":["Reactome:R-HSA-1475422","EC:2.7.11.12","Reactome:R-HSA-418549","Reactome:R-HSA-1497853","Reactome:R-HSA-418442"],"synonyms":[{"name":"3':5'-cyclic GMP-dependent protein kinase activity","type":"related"},{"name":"ATP:protein phosphotransferase (cGMP-dependent) activity","type":"related"},{"name":"PKG","type":"related"},{"name":"PKG 1alpha","type":"related"},{"name":"PKG 1beta","type":"related"},{"name":"PKG II","type":"related"},{"name":"STK23","type":"related"},{"name":"cGMP-dependent protein kinase ibeta activity","type":"related"},{"name":"guanosine 3':5'-cyclic monophosphate-dependent protein kinase activity","type":"related"}],"termid":"GO:0004692"}


id: GO:0000076
data:
  {"annotated_genes":["SJAG_02771","SJAG_04287","SJAG_01076","SJAG_03160","SJAG_02074","SJAG_02563","SJAG_01605","SJAG_03695","SJAG_01205","SJAG_01044","SJAG_03927","SJAG_02266","SJAG_01010","SJAG_02098","SJAG_00364","SJAG_04671","SJAG_03026"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116360,106930,91770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[79166,72793,75104,116362,117576,112343,99681,99514,71471,79825,91771,109624,100859,106933,117404,117103,94303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a DNA replication checkpoint, that prevents the initiation of nuclear division until DNA replication is complete, thereby ensuring that progeny inherit a full complement of the genome.","definition_xrefs":["PMID:11728327","PMID:12537518","GOC:curators","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA integrity checkpoint signaling","termid":"GO:0031570"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01205":null,"SJAG_01605":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03927":null,"SJAG_04287":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"DNA replication checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072437"],"synonyms":[{"name":"DNA replication checkpoint","type":"exact"},{"name":"signal transduction involved in DNA replication checkpoint","type":"exact"}],"termid":"GO:0000076","terms_by_termid":{"GO:0033314":null,"GO:0033315":null}}


id: GO:0047926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (2S)-bornyl diphosphate.","definition_xrefs":["PMID:42357","RHEA:18209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0009975","GO:0003674"],"is_obsolete":false,"name":"geranyl-diphosphate cyclase activity","secondary_identifiers":["MetaCyc:GERANYL-DIPHOSPHATE-CYCLASE-RXN","KEGG_REACTION:R02007","EC:5.5.1.8"],"synonyms":[{"name":"(+)-bornyl-diphosphate lyase (decyclizing)","type":"related"},{"name":"(+)-bornylpyrophosphate cyclase activity","type":"related"},{"name":"bornyl diphosphate synthase activity","type":"related"},{"name":"bornyl pyrophosphate synthase activity","type":"related"},{"name":"bornyl pyrophosphate synthetase activity","type":"related"}],"termid":"GO:0047926"}


id: PBO:0055072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2489","termid":"PBO:0055072"}


id: PBO:0078552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 42","termid":"PBO:0078552"}


id: GO:0060436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a bronchiole is generated and organized. A bronchiole is the first airway branch that no longer contains cartilage; it is a branch of the bronchi.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"bronchiole development","termid":"GO:0060435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bronchiole morphogenesis","termid":"GO:0060436"}


id: MONDO:0016593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of ataxia that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cerebellar ataxia","termid":"MONDO:0000437"},{"relation_name":"is_a","term_name":"atactic disorder","termid":"MONDO:0100308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired ataxia","secondary_identifiers":["MEDGEN:927781","icd11.foundation:71197968","GARD:20656","Orphanet:247242","UMLS:C4302112","SCTID:722968003"],"synonyms":[{"name":"acquired ataxia","type":"exact"}],"termid":"MONDO:0016593","xrefs":{"Monarch":{"xref_id":"0016593"}}}


id: PR:Q09710
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.03c gene.","definition_xrefs":["UniProtKB:Q09710","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.03c","synonyms":[{"name":"Spom972h-SPAC18B11.03c","type":"exact"}],"termid":"PR:Q09710"}


id: PR:P87155
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein unc-50 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein GMH1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.14","secondary_identifiers":["UniProtKB:P87155"],"synonyms":[{"name":"Spom972h-UNC50","type":"exact"},{"name":"meiotically up-regulated gene 16 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87155"}


id: PBO:0072843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 1","termid":"PBO:0072843"}


id: GO:1990526
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that is involved in the transcription regulation of mating genes in the yeast S. cerevisiae.","definition_xrefs":["GOC:rb","PMID:16782869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Ste12p-Dig1p-Dig2p complex","termid":"GO:1990526"}


id: PBO:0059637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 3","termid":"PBO:0059637"}


id: PBO:0084878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; PET123 exhibits genetic interactions with PET122, which encodes a COX3 mRNA-specific translational activator","termid":"PBO:0084878"}


id: PBO:0049015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein M6B","termid":"PBO:0049015"}


id: FYPO:0000233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic microtubules","termid":"FYPO:0004088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002399","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"long cytoplasmic microtubules","synonyms":[{"name":"elongated cytoplasmic microtubules","type":"exact"},{"name":"long cytoplasmic microtubules during mitotic cell cycle","type":"related"},{"name":"long cytoplasmic microtubules during vegetative growth","type":"exact"},{"name":"microtubule organization defect, long cytoplasmic microtubules","type":"exact"},{"name":"microtubule organization defects, long cytoplasmic microtubules","type":"exact"}],"termid":"FYPO:0000233"}


id: GO:0098722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of a stem cell during which it retains its identity and buds off a daughter cell with a new identity.","definition_xrefs":["PMID:18513950","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric cell division","termid":"GO:0008356"},{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asymmetric stem cell division","termid":"GO:0098722"}


id: GO:1901342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vasculature development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasculature development","synonyms":[{"name":"regulation of vascular system development","type":"related"}],"termid":"GO:1901342"}


id: GO:0071178
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch4 (ICN4), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN4 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch4 complex","type":"exact"}],"termid":"GO:0071178"}


id: PBO:0112906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-X, glycosylphosphatidylinositol-mannosyltransferase I complex subunit pig-X","termid":"PBO:0112906"}


id: PR:Q9P7Z4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2A9.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Z4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2A9.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.13","synonyms":[{"name":"Spom972h-SPBC2A9.13","type":"exact"}],"termid":"PR:Q9P7Z4"}


id: GO:1903614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of protein tyrosine phosphatase activity.","definition_xrefs":["GOC:TermGenie","PMID:11129957","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein tyrosine phosphatase activity (obsolete GO:1903614)","synonyms":[{"name":"down regulation of PPT-phosphatase activity","type":"exact"},{"name":"down regulation of PTP-phosphatase activity","type":"exact"},{"name":"down regulation of PTPase activity","type":"exact"},{"name":"down regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"down regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"down regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"down regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"down regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"down regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"down regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"down regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"down regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"down regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"down regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"down regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"down-regulation of PPT-phosphatase activity","type":"exact"},{"name":"down-regulation of PTP-phosphatase activity","type":"exact"},{"name":"down-regulation of PTPase activity","type":"exact"},{"name":"down-regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"down-regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"down-regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"down-regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"down-regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"down-regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"down-regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"down-regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"down-regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"down-regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"down-regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"down-regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"downregulation of PPT-phosphatase activity","type":"exact"},{"name":"downregulation of PTP-phosphatase activity","type":"exact"},{"name":"downregulation of PTPase activity","type":"exact"},{"name":"downregulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"downregulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"downregulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"downregulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"downregulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"downregulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"downregulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"downregulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"downregulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"downregulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"downregulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"downregulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"inhibition of PPT-phosphatase activity","type":"narrow"},{"name":"inhibition of PTP-phosphatase activity","type":"narrow"},{"name":"inhibition of PTPase activity","type":"narrow"},{"name":"inhibition of [phosphotyrosine]protein phosphatase activity","type":"narrow"},{"name":"inhibition of phosphoprotein phosphatase (phosphotyrosine) activity","type":"narrow"},{"name":"inhibition of phosphotyrosine histone phosphatase activity","type":"narrow"},{"name":"inhibition of phosphotyrosine phosphatase activity","type":"narrow"},{"name":"inhibition of phosphotyrosine protein phosphatase activity","type":"narrow"},{"name":"inhibition of phosphotyrosylprotein phosphatase activity","type":"narrow"},{"name":"inhibition of protein phosphotyrosine phosphatase activity","type":"narrow"},{"name":"inhibition of protein tyrosine phosphatase activity","type":"narrow"},{"name":"inhibition of protein-tyrosine-phosphatase activity","type":"narrow"},{"name":"inhibition of protein-tyrosine-phosphate phosphohydrolase activity","type":"narrow"},{"name":"inhibition of tyrosine O-phosphate phosphatase activity","type":"narrow"},{"name":"inhibition of tyrosylprotein phosphatase activity","type":"narrow"},{"name":"negative regulation of PPT-phosphatase activity","type":"exact"},{"name":"negative regulation of PTP-phosphatase activity","type":"exact"},{"name":"negative regulation of PTPase activity","type":"exact"},{"name":"negative regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"negative regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"negative regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"negative regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"negative regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"negative regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"negative regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"negative regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"negative regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"negative regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"negative regulation of tyrosylprotein phosphatase activity","type":"exact"}],"termid":"GO:1903614"}


id: GO:0046064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dCMP, deoxycytidine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009177"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dCMP metabolic process","termid":"GO:0046063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dCMP biosynthetic process","synonyms":[{"name":"dCMP anabolism","type":"exact"},{"name":"dCMP biosynthesis","type":"exact"},{"name":"dCMP formation","type":"exact"},{"name":"dCMP synthesis","type":"exact"}],"termid":"GO:0046064"}


id: PBO:0008966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIb-related protein (predicted)","termid":"PBO:0008966"}


id: MONDO:0011338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory condition characterized by erythroderma, desquamation, alopecia, chronic diarrhea, failure to thrive, lymphadenopathy, and hepatosplenomegaly, associated with severe combined immunodeficiency (SCID).","definition_xrefs":["Orphanet:39041"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Omenn syndrome","secondary_identifiers":["GARD:8198","SCTID:722067005","DOID:0060010","MEDGEN:398130","NANDO:2200697","NCIT:C61240","OMIM:603554","NANDO:1200324","UMLS:C2700553","MedDRA:10069097"],"synonyms":[{"name":"Omenn syndrome","type":"exact"},{"name":"combined immunodeficiency with hypereosinophilia","type":"exact"},{"name":"reticuloendotheliosis familial with eosinophilia","type":"related"},{"name":"reticuloendotheliosis, familial, with eosinophilia","type":"related"},{"name":"severe combined immunodeficiency with hypereosinophilia","type":"related"}],"termid":"MONDO:0011338","xrefs":{"Monarch":{"xref_id":"0011338"}}}


id: PBO:0085376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[PIN(+)] prion; an infectious protein conformation that is generally an ordered protein aggregate","termid":"PBO:0085376"}


id: PBO:0066882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 182","termid":"PBO:0066882"}


id: PBO:0031619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transposition","termid":"PBO:0031619"}


id: MONDO:0018428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 9","termid":"MONDO:0016908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"9q31.1q31.3 microdeletion syndrome","secondary_identifiers":["Orphanet:401923","GARD:21705","UMLS:C4750910","MEDGEN:1665719"],"synonyms":[{"name":"Del(9)(q31.1q31.3)","type":"exact"},{"name":"monosomy 9q31.1q31.3","type":"exact"}],"termid":"MONDO:0018428","xrefs":{"Monarch":{"xref_id":"0018428"}}}


id: PBO:0090762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Vps15","termid":"PBO:0090762"}


id: GO:0070724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as a receptor for bone morphogenetic proteins (BMPs); a homo- or heterodimer of type I and/or type II BMP receptor subunits.","definition_xrefs":["GOC:mh","PMID:19377468","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"BMP receptor complex","synonyms":[{"name":"bone morphogenetic protein receptor complex","type":"exact"}],"termid":"GO:0070724"}


id: GO:1904006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase D activity.","definition_xrefs":["GO_REF:0000059","PMID:11211872","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phospholipase D activity (obsolete GO:1904006)","synonyms":[{"name":"down regulation of choline phosphatase activity","type":"exact"},{"name":"down regulation of lecithinase D activity","type":"exact"},{"name":"down regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"down regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"down regulation of phospholipase D activity","type":"exact"},{"name":"down-regulation of choline phosphatase activity","type":"exact"},{"name":"down-regulation of lecithinase D activity","type":"exact"},{"name":"down-regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"down-regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"down-regulation of phospholipase D activity","type":"exact"},{"name":"downregulation of choline phosphatase activity","type":"exact"},{"name":"downregulation of lecithinase D activity","type":"exact"},{"name":"downregulation of lipophosphodiesterase II activity","type":"exact"},{"name":"downregulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"downregulation of phospholipase D activity","type":"exact"},{"name":"inhibition of choline phosphatase activity","type":"narrow"},{"name":"inhibition of lecithinase D activity","type":"narrow"},{"name":"inhibition of lipophosphodiesterase II activity","type":"narrow"},{"name":"inhibition of phosphatidylcholine phosphatidohydrolase activity","type":"narrow"},{"name":"inhibition of phospholipase D activity","type":"narrow"},{"name":"negative regulation of choline phosphatase activity","type":"exact"},{"name":"negative regulation of lecithinase D activity","type":"exact"},{"name":"negative regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"negative regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"}],"termid":"GO:1904006"}


id: MONDO:0013812
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86809],"is_not":false,"summary":null,"term":"MONDO:0013812"}]},"cv_name":"mondo","definition":"Any Baraitser-Winter cerebrofrontofacial syndrome in which the cause of the disease is a mutation in the ACTG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Baraitser-Winter cerebrofrontofacial syndrome","termid":"MONDO:0017579"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"Baraitser-winter syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081113","MEDGEN:482865","UMLS:C3281235","GARD:15817","OMIM:614583"],"synonyms":[{"name":"ACTG1 Baraitser-Winter cerebrofrontofacial syndrome","type":"exact"},{"name":"BRWS2","type":"related"},{"name":"Baraitser-WINTER syndrome 2","type":"related"},{"name":"Baraitser-Winter cerebrofrontofacial syndrome caused by mutation in ACTG1","type":"exact"},{"name":"Baraitser-Winter syndrome type 2","type":"exact"},{"name":"Baraitser-winter syndrome 2","type":"exact"}],"termid":"MONDO:0013812","terms_by_termid":{"MONDO:0013812":null},"xrefs":{"Monarch":{"xref_id":"0013812"}}}


id: GO:0060204
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the clathrin-sculpted glutamate transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"clathrin-sculpted glutamate transport vesicle","termid":"GO:0060199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"clathrin-sculpted glutamate transport vesicle lumen","synonyms":[{"name":"clathrin sculpted glutamate constitutive secretory pathway transport vesicle lumen","type":"exact"},{"name":"clathrin sculpted glutamate transport vesicle lumen","type":"exact"}],"termid":"GO:0060204"}


id: MONDO:0000039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypercalciuria, absorptive (obsolete MONDO:0000039)","termid":"MONDO:0000039","xrefs":{"Monarch":{"xref_id":"0000039"}}}


id: MONDO:0001468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"},{"relation_name":"is_a","term_name":"synovium disorder","termid":"MONDO:0056799"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synovial plica syndrome","secondary_identifiers":["ICD9:727.9","ICD9:727.83","MEDGEN:640475","SCTID:240171001","UMLS:C0554601","DOID:12225"],"synonyms":[{"name":"plica syndrome","type":"exact"},{"name":"synovial plica of knee","type":"exact"}],"termid":"MONDO:0001468","xrefs":{"Monarch":{"xref_id":"0001468"}}}


id: GO:0015277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ionotropic glutamate receptor activity that exhibits fast gating by glutamate, acts by opening a cation channel permeable to sodium and potassium, and for which kainate is an agonist.","definition_xrefs":["GOC:mah","PMID:10049997","PMID:8804111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate-gated receptor activity","termid":"GO:0004970"},{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"ligand-gated sodium channel activity","termid":"GO:0015280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857","GO:0038023"],"is_obsolete":false,"name":"kainate selective glutamate receptor activity","termid":"GO:0015277"}


id: GO:1900484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein targeting to vacuolar membrane.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein targeting to membrane","termid":"GO:0090315"},{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuolar membrane","termid":"GO:1900483"},{"relation_name":"is_a","term_name":"negative regulation of vacuolar transport","termid":"GO:1903336"},{"relation_name":"negatively_regulates","term_name":"protein targeting to vacuolar membrane","termid":"GO:0044395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006605","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein targeting to vacuolar membrane","synonyms":[{"name":"down regulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"down-regulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"downregulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"inhibition of protein targeting to vacuolar membrane","type":"narrow"}],"termid":"GO:1900484"}


id: PBO:0071946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 23","termid":"PBO:0071946"}


id: FYPO:0007394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of one or more RNA molecules differs from normal.","definition_xrefs":["PMID:24793650","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"abnormal RNA structure","synonyms":[{"name":"abnormal RNA secondary structure","type":"narrow"}],"termid":"FYPO:0007394"}


id: MONDO:0800036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any MELAS syndromein which the cause of the disease is a mutation in the MTTC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MELAS syndrome","termid":"MONDO:0010789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"MELAS syndrome caused by mutation in MTTC","synonyms":[{"name":"MTTC MELAS syndrome","type":"exact"}],"termid":"MONDO:0800036","xrefs":{"Monarch":{"xref_id":"0800036"}}}


id: GO:1901983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein acetylation.","definition_xrefs":["GOC:TermGenie","PMID:22117195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein acetylation","termid":"GO:0006473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein acetylation","synonyms":[{"name":"regulation of protein amino acid acetylation","type":"exact"}],"termid":"GO:1901983"}


id: PBO:0057614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1180","termid":"PBO:0057614"}


id: PBO:0070330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 2","termid":"PBO:0070330"}


id: SO:0100006
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of 3 consecutive residues with dihedral angles as follows: res i: phi -90 bounds -120 to -60, res i: psi -10 bounds -50 to 30, res i+1: phi -75 bounds -100 to -50, res i+1: psi 140 bounds 110 to 170. An extra restriction of the length of the O to O distance would be useful, that it be less than 5 Angstrom. More precisely these two oxygens are the main chain carbonyl oxygen atoms of residues i-1 and i+1.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"catmat_right_handed_three","synonyms":[{"name":"catmat-3r","type":"exact"}],"termid":"SO:0100006"}


id: PBO:0050215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 32","termid":"PBO:0050215"}


id: MONDO:0044739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"severe cutaneous adverse reaction","termid":"MONDO:0005594"},{"relation_name":"is_a","term_name":"toxic epidermal necrolysis","termid":"MONDO:0019810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Stevens-Johnson syndrome/toxic epidermal necrolysis overlap syndrome","secondary_identifiers":["icd11.foundation:496418968","MEDGEN:783034","GARD:22066","Orphanet:506784","UMLS:C3661878"],"synonyms":[{"name":"SJS/TEN overlap syndrome","type":"exact"},{"name":"Stevens-Johnson/TEN overlap syndrome","type":"exact"},{"name":"Stevens-Johnson/toxic epidermal necrolysis overlap syndrome","type":"exact"}],"termid":"MONDO:0044739","xrefs":{"Monarch":{"xref_id":"0044739"}}}


id: GO:0070328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of triglyceride within an organism or cell.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol homeostasis","termid":"GO:0055090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"triglyceride homeostasis","synonyms":[{"name":"triacylglycerol homeostasis","type":"exact"}],"termid":"GO:0070328"}


id: MOD:01868
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins of 140.094963 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.000001 Da","termid":"MOD:01515"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at 140.094963 Da","termid":"MOD:01868"}


id: PBO:0041712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CALML3 antisense RNA 1","termid":"PBO:0041712"}


id: MONDO:1010693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, sheep","secondary_identifiers":["OMIA:000038-9940"],"termid":"MONDO:1010693","xrefs":{"Monarch":{"xref_id":"1010693"}}}


id: MONDO:0001226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute inflammation of the conjunctiva characterized by pink or red color in the eyes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute conjunctivitis","termid":"MONDO:0001214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute contagious conjunctivitis","secondary_identifiers":["DOID:11213","ICD9:041.89","MEDGEN:272038","SCTID:399219006","UMLS:C1313983","NCIT:C35704"],"synonyms":[{"name":"Contagious opthalmia","type":"exact"},{"name":"conjunctivitis infective","type":"exact"},{"name":"pinkeye","type":"exact"}],"termid":"MONDO:0001226","xrefs":{"Monarch":{"xref_id":"0001226"}}}


id: GO:0097348
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell endocytic vesicle.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endocytic vesicle membrane","termid":"GO:0097348"}


id: MONDO:0043352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute necrotic infection of the SCROTUM; PENIS; or PERINEUM. It is characterized by scrotum pain and redness with rapid progression to gangrene and sloughing of tissue. Fournier gangrene is usually secondary to perirectal or periurethral infections associated with local trauma, operative procedures, or urinary tract disease.","definition_xrefs":["MESH:D018934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fournier gangrene","secondary_identifiers":["UMLS:C0238419","MEDGEN:65967","SCTID:398318005"],"synonyms":[{"name":"Fournier disease","type":"related"},{"name":"Fournier's disease","type":"related"},{"name":"Fournier's gangrene","type":"related"},{"name":"Fourniers disease","type":"related"},{"name":"Fourniers gangrene","type":"related"},{"name":"fournier gangrene","type":"exact"},{"name":"fournier's gangrene","type":"exact"},{"name":"gangrene, Fournier","type":"related"},{"name":"gangrene, Fournier's","type":"related"}],"termid":"MONDO:0043352","xrefs":{"Monarch":{"xref_id":"0043352"}}}


id: PATO:0000889
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000889 cytoplasmic male sterility value (obsolete PATO:0000889)","termid":"PATO:0000889"}


id: MONDO:0006067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive morphologic variant of acinar adenocarcinoma of the prostate gland characterized by the presence of lakes of extracellular mucin. This diagnosis applies when at least 25% of the resected tumor contains extracellular mucin.","definition_xrefs":["NCIT:C5537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostatic acinar adenocarcinoma","termid":"MONDO:0002493"},{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"acinar prostate mucinous adenocarcinoma","secondary_identifiers":["UMLS:C1335513","DOID:3703","EFO:1000065","MEDGEN:277536"],"synonyms":[{"name":"acinar colloid prostate adenocarcinoma","type":"exact"},{"name":"colloid adenocarcinoma of prostate","type":"exact"},{"name":"colloid adenocarcinoma of the prostate","type":"exact"},{"name":"colloidal adenocarcinoma of prostate","type":"exact"},{"name":"colloidal adenocarcinoma of the prostate","type":"exact"},{"name":"colloidal prostate adenocarcinoma","type":"exact"},{"name":"mucinous adenocarcinoma of prostate","type":"exact"},{"name":"mucinous adenocarcinoma of the prostate","type":"exact"},{"name":"prostate colloid adenocarcinoma","type":"exact"}],"termid":"MONDO:0006067","xrefs":{"Monarch":{"xref_id":"0006067"}}}


id: GO:0052127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement on or near host (obsolete GO:0052127)","termid":"GO:0052127"}


id: PBO:0069457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 722, pseudogene","termid":"PBO:0069457"}


id: FYPO:0007651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to pericentric heterochromatin is abolished during mitosis.","definition_xrefs":["PomBase:mah","PMID:14730319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to pericentric heterochromatin","termid":"FYPO:0007648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to pericentric heterochromatin during mitosis","synonyms":[{"name":"abolished protein localization to centromeric heterochromatin during mitosis","type":"exact"},{"name":"abolished protein localization to nuclear centromeric heterochromatin during mitosis","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic M phase","type":"related"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007651"}


id: GO:0072385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an organelle towards the minus end of a microtubule, mediated by motor proteins. This process begins with the attachment of an organelle to a microtubule, and ends when the organelle reaches its final destination.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"minus-end-directed organelle transport along microtubule","synonyms":[{"name":"microtubule minus-end-directed organelle distribution","type":"narrow"},{"name":"microtubule minus-end-directed organelle localization","type":"exact"}],"termid":"GO:0072385"}


id: FYPO:0004447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the prospore membrane is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to prospore membrane","synonyms":[{"name":"protein mislocalised to prospore membrane","type":"exact"},{"name":"protein mislocalized to forespore membrane","type":"exact"}],"termid":"FYPO:0004447"}


id: GO:0090306
data:
  {"annotated_genes":["SJAG_01546","SJAG_03073","SJAG_04745","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95109,97099],"is_not":false,"summary":null,"term":"GO:0090306"},{"annotations":[99547,101752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140642"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle that contributes to the process of meiosis.","definition_xrefs":["GOC:vw","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle organization","termid":"GO:0000212"},{"relation_name":"is_a","term_name":"spindle assembly","termid":"GO:0051225"},{"relation_name":"part_of","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03073":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0007049","GO:0044085","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"meiotic spindle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle assembly involved in meiosis","type":"exact"}],"termid":"GO:0090306","terms_by_termid":{"GO:0090306":null,"GO:0140642":null}}


id: MONDO:1012711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immunodeficiency characterized by B-lymphocyte lymphopenia and progressive anemia that occurs in horses due to a mutation in the SLC5A3 gene.","definition_xrefs":["PMID:21750681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"immunodeficiency disease, non-human animal","termid":"MONDO:1011724"},{"relation_name":"is_a","term_name":"anemia, non-human animal","termid":"MONDO:1012981"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency syndrome, SLC5A3-related, horse","secondary_identifiers":["OMIA:001578-9796"],"synonyms":[{"name":"Fell pony syndrome, horse","type":"related"}],"termid":"MONDO:1012711","xrefs":{"Monarch":{"xref_id":"1012711"}}}


id: PBO:0116268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; strong preference for dsRNA; remodels RNP structure for efficient transcription termination; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may suppress transcription from cryptic initiation sites; promotes Mex67p-mediated nuclear export of mRNA by facilitating annealing with antisense RNAs to create dsRNAs; binds G-quadruplex (G4) nucleic acids","termid":"PBO:0116268"}


id: SO:0001926
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA transcript, derived from the transcription of the telomere. These transcripts are antisense of ARRET transcripts.","definition_xrefs":["PMID:22139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomeric_transcript","termid":"SO:0001927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti_ARRET","synonyms":[{"name":"anti-ARRET","type":"exact"}],"termid":"SO:0001926"}


id: GO:0035372
data:
  {"annotated_genes":["SJAG_02695","SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70972],"is_not":false,"summary":null,"term":"GO:0035372"},{"annotations":[97308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a microtubule.","definition_xrefs":["GOC:lb","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to microtubule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to microtubule","type":"exact"}],"termid":"GO:0035372","terms_by_termid":{"GO:0035372":null,"GO:1904518":null}}


id: MONDO:0016754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vestibular schwannoma (obsolete MONDO:0016754)","termid":"MONDO:0016754","xrefs":{"Monarch":{"xref_id":"0016754"}}}


id: PBO:0013036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human CCDC174 ortholog","termid":"PBO:0013036"}


id: MONDO:0033483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial polycythemia in which the cause of the disease is a mutation in the EPO gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial polycythemia","termid":"MONDO:0001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"erythrocytosis, familial, 5","secondary_identifiers":["DOID:0080290","MEDGEN:1638941","OMIM:617907","UMLS:C4693552"],"synonyms":[{"name":"ECYT5","type":"related"},{"name":"EPO familial polycythemia","type":"exact"},{"name":"erythrocytosis, familial, 5","type":"exact"},{"name":"familial erythrocytosis 5","type":"related"},{"name":"familial polycythemia caused by mutation in EPO","type":"exact"}],"termid":"MONDO:0033483","xrefs":{"Monarch":{"xref_id":"0033483"}}}


id: PBO:0003943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron biosynthesis protein (predicted)","termid":"PBO:0003943"}


id: PBO:0055432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2862","termid":"PBO:0055432"}


id: GO:0071553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a pyrimidine nucleotide and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:10736418","GOC:sl","PMID:12369950","PMID:15796906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"nucleotide receptor activity","termid":"GO:0016502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled pyrimidinergic nucleotide receptor activity","synonyms":[{"name":"G protein coupled pyrimidinergic nucleotide receptor activity","type":"exact"},{"name":"G-protein coupled pyrimidinergic nucleotide receptor activity","type":"exact"},{"name":"pyrimidinergic nucleotide receptor activity, G protein coupled","type":"exact"},{"name":"pyrimidinergic nucleotide receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0071553"}


id: MOD:00367
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-sulfo-L-threonine.","definition_xrefs":["Unimod:40#T","PubMed:14752058","RESID:AA0362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfated residue","termid":"MOD:00695"},{"relation_name":"is_a","term_name":"residues isobaric at 181.00-181.02 Da","termid":"MOD:00773"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-sulfo-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(sulfooxy)butanoic acid","type":"exact"},{"name":"2-amino-3-hydroxybutanoic acid 3-sulfate","type":"exact"},{"name":"MOD_RES Sulfothreonine","type":"exact"},{"name":"O-Sulfonation","type":"related"},{"name":"O-sulfo-L-threonine","type":"exact"},{"name":"O3-sulfonothreonine","type":"exact"},{"name":"O3-sulfothreonine","type":"exact"},{"name":"Sulfo","type":"related"},{"name":"threonine sulfate ester","type":"exact"}],"termid":"MOD:00367"}


id: PBO:0017050
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae STE20","termid":"PBO:0017050"}


id: GO:0032492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a molecule of oomycetes origin is received and converted into a molecular signal.","definition_xrefs":["GOC:rl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of oomycetes origin","termid":"GO:0002240"},{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"detection of external biotic stimulus","termid":"GO:0098581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of molecule of oomycetes origin","synonyms":[{"name":"detection of oomycetes associated molecule","type":"exact"}],"termid":"GO:0032492"}


id: MONDO:0008472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondyloepiphyseal dysplasia (SED), MacDermot type is characterized by short stature, femoral epiphyseal dysplasia, mild vertebral changes and sensorineural deafness.","definition_xrefs":["Orphanet:163668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia, MacDermot type","secondary_identifiers":["GARD:16996","MEDGEN:401067","MESH:C566659","OMIM:184000","UMLS:C1866719","icd11.foundation:800575171"],"synonyms":[{"name":"spondyloepiphyseal dysplasia, myopia, and sensorineural deafness","type":"related"},{"name":"spondyloepiphyseal dysplasia-myopia-sensorineural deafness syndrome","type":"exact"}],"termid":"MONDO:0008472","xrefs":{"Monarch":{"xref_id":"0008472"}}}


id: PBO:0047852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p21.2)","termid":"PBO:0047852"}


id: PBO:0072911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCAND3 pseudogene 1","termid":"PBO:0072911"}


id: GO:0034914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trinitrophenol hydride Meisenheimer complex = 2,4-dinitrophenol + nitrite. Trinitrophenol is also known as TNP.","definition_xrefs":["UM-BBD_reactionID:r1448"],"gene_count":0,"genotype_count":0,"name":"obsolete trinitrophenol hydride denitratase activity (obsolete GO:0034914)","synonyms":[{"name":"2,4,6-trinitrophenol hydride denitratase activity","type":"exact"},{"name":"TNP hydride denitratase activity","type":"exact"}],"termid":"GO:0034914"}


id: PBO:0028009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_during_meiotic_cell_cycle","termid":"PBO:0028009"}


id: MONDO:0011240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polymalfomative syndrome characterized by cutaneous capillary malformations, megalencephaly, cortical brain malformations (most distinctively polymicrogyria), abnormalities of somatic growth with body and brain asymmetry, developmental delay, and characteristic facial dysmorphism.","definition_xrefs":["Orphanet:60040"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete obsolete rare capillary malformation with associated anomalies (obsolete MONDO:0018719)","termid":"MONDO:0018719"},{"relation_name":"excluded_subClassOf","term_name":"skin vascular disease","termid":"MONDO:0019293"},{"relation_name":"excluded_subClassOf","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes","termid":"MONDO:0100283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"PIK3CA-related overgrowth spectrum","termid":"MONDO:1040002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"megalencephaly-capillary malformation-polymicrogyria syndrome","secondary_identifiers":["OMIM:602501","MEDGEN:355421","ICD9:759.89","GARD:6950","MESH:C536142","NANDO:2200823","NORD:1423","SCTID:703370002","UMLS:C1865285"],"synonyms":[{"name":"M-CM","type":"related"},{"name":"M-CMTC","type":"related"},{"name":"MCAP","type":"exact"},{"name":"MCM","type":"exact"},{"name":"MCMTC","type":"exact"},{"name":"Megalencephaly-Capillary Malformation","type":"exact"},{"name":"macrocephaly cutis marmorata telangiectatica congenita","type":"related"},{"name":"macrocephaly-capillary malformation","type":"related"},{"name":"macrocephaly-capillary malformation syndrome","type":"exact"},{"name":"macrocephaly-cutis marmorata telangiectatica congenita","type":"related"},{"name":"macrocephaly-cutis marmorata telangiectatica congenita syndrome","type":"exact"},{"name":"megalencephaly cutis marmorata telangiectatica congenita","type":"related"},{"name":"megalencephaly-capillary malformation syndrome","type":"exact"},{"name":"megalencephaly-capillary malformation-polymicrogyria syndrome","type":"exact"},{"name":"megalencephaly-capillary malformation-polymicrogyria syndrome, somatic","type":"exact"},{"name":"megalencephaly-cutis marmorata telangiectatica congenita","type":"related"},{"name":"megalencephaly-cutis marmorata telangiectatica congenita syndrome","type":"exact"},{"name":"megalocephaly cutis marmorata telangiectatica congenita","type":"related"}],"termid":"MONDO:0011240","xrefs":{"Monarch":{"xref_id":"0011240"}}}


id: PR:O94590
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.05","synonyms":[{"name":"Spom972h-sec1","type":"exact"}],"termid":"PR:O94590"}


id: GO:0090008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hypoblast over time, from its formation to the mature structure. The hypoblast is a tissue formed from the inner cell mass that lies beneath the epiblast.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoblast development","termid":"GO:0090008"}


id: PBO:0071024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 26","termid":"PBO:0071024"}


id: PBO:0004103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Vps902 (predicted)","termid":"PBO:0004103"}


id: FYPO:0004127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 4 of histone H3 at protein-coding genes occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"},{"relation_name":"is_a","term_name":"decreased histone H3-K4 dimethylation during vegetative growth","termid":"FYPO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K4 dimethylation at protein coding gene during vegetative growth","synonyms":[{"name":"decreased histone H3 K4 dimethylation at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K4 dimethylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4 dimethylation at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K4me2 at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K4 dimethylation at protein coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 dimethylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0004127"}


id: GO:0018047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-phenylalanine amide by hydrolysis and oxidation of an interior Phe-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0094"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-phenylalanine amidation (obsolete GO:0018047)","termid":"GO:0018047"}


id: PBO:0061479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear respiratory factor 1","termid":"PBO:0061479"}


id: PATO:0002322
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperelliptic","termid":"PATO:0002322"}


id: PR:Q10201
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- npg1 gene.","definition_xrefs":["UniProtKB:Q10201","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17D1.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.07c","synonyms":[{"name":"Spom972h-npg1","type":"exact"}],"termid":"PR:Q10201"}


id: GO:0004167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-dopachrome = 5,6-dihydroxyindole-2-carboxylate.","definition_xrefs":["EC:5.3.3.12","RHEA:13041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dopachrome isomerase activity","secondary_identifiers":["MetaCyc:DOPACHROME-DELTA-ISOMERASE-RXN","KEGG_REACTION:R03673","GO:0048059"],"synonyms":[{"name":"DCF activity","type":"related"},{"name":"DCT activity","type":"related"},{"name":"L-dopachrome isomerase activity","type":"related"},{"name":"L-dopachrome keto-enol isomerase activity","type":"related"},{"name":"L-dopachrome-methyl ester tautomerase activity","type":"related"},{"name":"TRP activity","type":"related"},{"name":"TRP-1","type":"related"},{"name":"TRP-2","type":"related"},{"name":"TRP2","type":"related"},{"name":"dopachrome Delta(7),Delta(2)-isomerase activity","type":"related"},{"name":"dopachrome conversion activity","type":"broad"},{"name":"dopachrome conversion factor activity","type":"broad"},{"name":"dopachrome delta-isomerase activity","type":"exact"},{"name":"dopachrome delta7,Delta2-isomerase activity","type":"related"},{"name":"dopachrome keto-enol isomerase activity","type":"related"},{"name":"dopachrome oxidoreductase activity","type":"related"},{"name":"dopachrome rearranging enzyme activity","type":"related"},{"name":"dopachrome tautomerase activity","type":"related"},{"name":"dopachrome-rearranging enzyme","type":"related"},{"name":"tryosinase-related protein-2","type":"related"},{"name":"tyrosinase-related protein 2 activity","type":"related"}],"termid":"GO:0004167"}


id: MONDO:1012213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"persistent right aortic arch, non-human animal","termid":"MONDO:1011644"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent right aortic arch, domestic cat","secondary_identifiers":["OMIA:000794-9685"],"termid":"MONDO:1012213","xrefs":{"Monarch":{"xref_id":"1012213"}}}


id: PBO:0076380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tachykinin precursor 1","termid":"PBO:0076380"}


id: GO:0007273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of synapse (obsolete GO:0007273)","synonyms":[{"name":"regulation of synapse","type":"exact"}],"termid":"GO:0007273"}


id: PBO:0090964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apm3","termid":"PBO:0090964"}


id: GO:1901662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of quinone.","definition_xrefs":["GOC:go_curators","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"quinone metabolic process","termid":"GO:1901661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"quinone catabolic process","secondary_identifiers":["GO:0042378"],"synonyms":[{"name":"quinone breakdown","type":"exact"},{"name":"quinone catabolism","type":"exact"},{"name":"quinone cofactor breakdown","type":"related"},{"name":"quinone cofactor catabolic process","type":"related"},{"name":"quinone cofactor catabolism","type":"related"},{"name":"quinone cofactor degradation","type":"related"},{"name":"quinone degradation","type":"exact"}],"termid":"GO:1901662"}


id: GO:0140586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Bridging together a cis-regulatory element and a terminator DNA sequences on the chromatin, holding two loop anchors together, maintaining a chromatin loop.","definition_xrefs":["PMID:19933151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin loop anchoring activity","termid":"GO:0140587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"promoter-terminator loop anchoring activity","synonyms":[{"name":"terminator-promoter loop anchoring activity","type":"exact"}],"termid":"GO:0140586"}


id: GO:0070652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that localizes to interphase centrosomes and to mitotic spindle tubules and regulates mitotic spindle assembly and centrosome integrity; in human, the complex consists of eight subunits, some of which are homologous to subunits of the Drosophila Augmin complex.","definition_xrefs":["PMID:19427217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"HAUS complex","synonyms":[{"name":"HAUS augmin complex","type":"exact"}],"termid":"GO:0070652"}


id: PBO:0027303
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_thioredoxin-disulfide_reductase_activity","termid":"PBO:0027303"}


id: GO:0102919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMNH2 + O2 = 5,6-dimethylbenzimidazole + D-erythrose 4-phosphate + dialuric acid.","definition_xrefs":["EC:1.13.11.79","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"5,6-dimethylbenzimidazole synthase activity","secondary_identifiers":["MetaCyc:RXN-8771","RHEA:27345"],"termid":"GO:0102919"}


id: PBO:0030631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_sucrose_carbon_source","termid":"PBO:0030631"}


id: RO:0002497
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence ends during or before y if and only if the time point at which x ends is before or equivalent to the time point at which y ends.","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_structure_and_stage","termid":"RO:0002487"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_during_or_before","termid":"RO:0002497"}


id: GO:0051682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactomannan, a polysaccharide composed of D-galactosyl and D-mannosyl. The mannosyl units form the backbone structure (a linear main chain) with the D-galactosyl as single side units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"galactomannan metabolic process","termid":"GO:0051069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"galactomannan catabolic process","termid":"GO:0051682"}


id: MOD:00594
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified resiues with a mass of 113.047678 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"},{"relation_name":"is_a","term_name":"residues isobaric at 113.0-113.1 Da","termid":"MOD:00624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 113.047678 Da","termid":"MOD:00594"}


id: MONDO:0016333
data:
  {"annotated_genes":["SJAG_02919","SJAG_03703","SJAG_02611","SJAG_01754","SJAG_04567","SJAG_01209","SJAG_04231","SJAG_03815","SJAG_02431","SJAG_MIT03","SJAG_03145","SJAG_MIT13","SJAG_01671","SJAG_01139","SJAG_04621","SJAG_MIT15","SJAG_01240","SJAG_01322"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032592"},{"annotations":[86905,86906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030300"},{"annotations":[85908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859358"},{"annotations":[86723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957545"},{"annotations":[86234,86235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"},{"annotations":[86543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012808"},{"annotations":[86814,86813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013198"},{"annotations":[87389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013339"},{"annotations":[85501,85502,85500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014073"},{"annotations":[86523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013261"},{"annotations":[86524,86525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013262"},{"annotations":[86040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012556"},{"annotations":[85900,85901,85902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010788"},{"annotations":[87544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013968"}]},"cv_name":"mondo","definition":"A a genetic form of heart disease that occurs when heart (cardiac) muscle becomes thin and weakened in at least one chamber of the heart, causing the open area of the chamber to become enlarged (dilated). As a result, the heart is unable to pump blood as efficiently as usual. To compensate, the heart attempts to increase the amount of blood being pumped through the heart, leading to further thinning and weakening of the cardiac muscle. Over time, this condition results in heart failure.","direct_ancestors":[{"relation_name":"is_a","term_name":"dilated cardiomyopathy","termid":"MONDO:0005021"},{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"}],"gene_count":18,"genes_by_uniquename":{"SJAG_01139":null,"SJAG_01209":null,"SJAG_01240":null,"SJAG_01322":null,"SJAG_01671":null,"SJAG_01754":null,"SJAG_02431":null,"SJAG_02611":null,"SJAG_02919":null,"SJAG_03145":null,"SJAG_03703":null,"SJAG_03815":null,"SJAG_04231":null,"SJAG_04567":null,"SJAG_04621":null,"SJAG_MIT03":null,"SJAG_MIT13":null,"SJAG_MIT15":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial dilated cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:90951","OMIMPS:115200","GARD:20525","UMLS:C0340427","Orphanet:217607","MESH:C536231"],"synonyms":[{"name":"DCM","type":"related"},{"name":"dilated cardiomyopathy, familial","type":"related"},{"name":"hereditary dilated cardiomyopathy","type":"exact"},{"name":"hypokinetic dilated cardiomyopathy, familial","type":"related"},{"name":"idiopathic dilated cardiomyopathy","type":"related"}],"termid":"MONDO:0016333","terms_by_termid":{"MONDO:0008409":null,"MONDO:0010788":null,"MONDO:0012556":null,"MONDO:0012808":null,"MONDO:0013198":null,"MONDO:0013261":null,"MONDO:0013262":null,"MONDO:0013339":null,"MONDO:0013968":null,"MONDO:0014073":null,"MONDO:0030300":null,"MONDO:0032592":null,"MONDO:0859358":null,"MONDO:0957545":null},"xrefs":{"Monarch":{"xref_id":"0016333"}}}


id: PBO:0012589
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RASA1","termid":"PBO:0012589"}


id: GO:0046847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb","PMID:16337369","PMID:18464790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"filopodium assembly","synonyms":[{"name":"filopodia biosynthesis","type":"related"},{"name":"filopodia formation","type":"related"},{"name":"filopodium formation","type":"related"}],"termid":"GO:0046847"}


id: PBO:0078851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC5 opposite strand","termid":"PBO:0078851"}


id: MONDO:0021074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pathological process with signs indicating it may become cancerous. Representative examples include leukoplakia, dysplastic nevus, actinic keratosis, xeroderma pigmentosum, and intraepithelial neoplasia.","definition_xrefs":["NCIT:C3341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor","termid":"MONDO:0045024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"precancerous condition","secondary_identifiers":["MESH:D011230","MEDGEN:19442","UMLS:C0032927"],"synonyms":[{"name":"precancerous condition","type":"exact"},{"name":"precancerous state","type":"exact"},{"name":"premalignant condition","type":"exact"},{"name":"premalignant state","type":"exact"}],"termid":"MONDO:0021074","xrefs":{"Monarch":{"xref_id":"0021074"}}}


id: SO:0000409
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A biological_region of sequence that, in the molecule, interacts selectively and non-covalently with other molecules. A region on the surface of a molecule that may interact with another molecule. When applied to polypeptides: Amino acids involved in binding or interactions. It can also apply to an amino acid bond which is represented by the positions of the two flanking amino acids.","definition_xrefs":["EBIBS:GAR","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binding_site","secondary_identifiers":["http://en.wikipedia.org/wiki/Binding_site","BS:00033"],"synonyms":[{"name":"INSDC_feature:misc_binding","type":"exact"},{"name":"binding site","type":"exact"},{"name":"binding_or_interaction_site","type":"exact"},{"name":"site","type":"related"}],"termid":"SO:0000409"}


id: GO:0090121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly into constituent parts of the low-density lipoprotein particle in the lysosome that contributes to cholesterol transport.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low-density lipoprotein particle disassembly","termid":"GO:0090495"},{"relation_name":"part_of","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"low-density lipoprotein particle disassembly involved in cholesterol transport","termid":"GO:0090121"}


id: PBO:0083000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic seryl-tRNA synthetase; class II aminoacyl-tRNA synthetase that aminoacylates tRNA(Ser), displays tRNA-dependent amino acid recognition which enhances discrimination of the serine substrate, interacts with peroxin Pex21p","termid":"PBO:0083000"}


id: GO:0140337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Directly binding to diacylglyceride and delivering it either to an acceptor molecule or to a specific location.","definition_xrefs":["PMID:9132017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0120013"],"is_obsolete":false,"name":"diacylglyceride transfer activity","synonyms":[{"name":"diacylglyceride carrier activity","type":"exact"}],"termid":"GO:0140337"}


id: PBO:0048808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit beta 2","termid":"PBO:0048808"}


id: PBO:0078783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 8-1","termid":"PBO:0078783"}


id: PomGeneEx:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is present at the same level or produced at a the same rate under two or more sets of conditions or over a time course.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constant","synonyms":[{"name":"gene expression constant","type":"exact"},{"name":"gene product level constant","type":"exact"}],"termid":"PomGeneEx:0000007"}


id: GO:0050671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of lymphocyte proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell proliferation","termid":"GO:0032946"},{"relation_name":"is_a","term_name":"regulation of lymphocyte proliferation","termid":"GO:0050670"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte activation","termid":"GO:0051251"},{"relation_name":"positively_regulates","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte proliferation","synonyms":[{"name":"activation of lymphocyte proliferation","type":"narrow"},{"name":"stimulation of lymphocyte proliferation","type":"narrow"},{"name":"up regulation of lymphocyte proliferation","type":"exact"},{"name":"up-regulation of lymphocyte proliferation","type":"exact"},{"name":"upregulation of lymphocyte proliferation","type":"exact"}],"termid":"GO:0050671"}


id: MOD:01698
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an amino group with a trimethylaminium group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trimethylated protonated-residue","termid":"MOD:00711"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"alpha-amino trimethylated protonated-residue","synonyms":[{"name":"N2Me3+Res","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:01698"}


id: GO:0097738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which, in some fungal species, hyphae grow as a network of invasive thread-like filaments formed from chains of attached cells within a solid or semi-solid substrate.","definition_xrefs":["PMID:10021365","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"asexual reproduction","termid":"GO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate mycelium formation","termid":"GO:0097738"}


id: PR:Q9Y7U6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rgf1 gene.","definition_xrefs":["UniProtKB:Q9Y7U6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho1 guanine nucleotide exchange factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.07","synonyms":[{"name":"Spom972h-rgf1","type":"exact"}],"termid":"PR:Q9Y7U6"}


id: PBO:0082911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteinyl-tRNA synthetase; CRS1 has two in-frame start codons resulting in a shorter isoform that is retained in the cytosol and a longer form that is mitochondrial; may interact with ribosomes, based on co-purification experiments; human gene CARS allows growth of the yeast haploid null mutant after sporulation of a heterozygous diploid","termid":"PBO:0082911"}


id: GO:2001245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylcholine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine metabolic process","termid":"GO:0150172"},{"relation_name":"regulates","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylcholine biosynthetic process","synonyms":[{"name":"regulation of phosphatidylcholine anabolism","type":"exact"},{"name":"regulation of phosphatidylcholine biosynthesis","type":"exact"},{"name":"regulation of phosphatidylcholine formation","type":"exact"},{"name":"regulation of phosphatidylcholine synthesis","type":"exact"}],"termid":"GO:2001245"}


id: PBO:0060768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 12","termid":"PBO:0060768"}


id: GO:1903876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 11-deoxycortisol.","definition_xrefs":["GOC:TermGenie","GO_REF:0000067","PMID:10802282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"11-deoxycortisol binding","termid":"GO:1903876"}


id: MONDO:0044314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 78","secondary_identifiers":["MEDGEN:1378790","GARD:16229","OMIM:617433","UMLS:C4479481"],"synonyms":[{"name":"RP78","type":"related"},{"name":"retinitis pigmentosa 78","type":"exact"}],"termid":"MONDO:0044314","xrefs":{"Monarch":{"xref_id":"0044314"}}}


id: GO:0001858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the iC3b product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["ISBN:0781735149","GOC:signaling","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"},{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"complement component iC3b receptor activity","termid":"GO:0001858"}


id: PBO:0068085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 391","termid":"PBO:0068085"}


id: GO:0038182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular bile acid and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:32480317","PMID:36409000","PMID:12524422","PMID:35415765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled bile acid receptor activity","secondary_identifiers":["Wikipedia:G_protein-coupled_bile_acid_receptor"],"synonyms":[{"name":"G-protein coupled bile acid receptor activity","type":"exact"},{"name":"cell surface bile acid receptor","type":"broad"},{"name":"lithocholic acid receptor activity","type":"broad"},{"name":"membrane bile acid receptor activity","type":"broad"}],"termid":"GO:0038182"}


id: GO:0097072
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An interferon regulatory factor complex that consists of a homodimer of interferon regulatory factor 3.","definition_xrefs":["GOC:cna","PMID:12855817","PMID:14556004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon regulatory factor complex","termid":"GO:0097071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interferon regulatory factor 3 complex","synonyms":[{"name":"IRF3:IRF3 complex","type":"exact"}],"termid":"GO:0097072"}


id: PBO:0045148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 6","termid":"PBO:0045148"}


id: PBO:0048145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 6 pseudogene 1","termid":"PBO:0048145"}


id: GO:0044322
data:
  {"annotated_genes":["SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[67104],"is_not":false,"summary":null,"term":"GO:0044322"}]},"cv_name":"cellular_component","definition":"A subcompartment of the endoplasmic reticulum in which proteins with improper or incorrect folding accumulate. Enzymes in this compartment direct proteins with major folding problems to translocation to the cytosol and degradation, and proteins with minor folding problems to the ER, to interact with chaperon proteins.","definition_xrefs":["PMID:11408579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endoplasmic reticulum","termid":"GO:0005783"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"endoplasmic reticulum quality control compartment","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"ER quality control compartment","type":"exact"},{"name":"ER-derived quality control compartment","type":"related"},{"name":"ERQC","type":"exact"}],"termid":"GO:0044322","terms_by_termid":{"GO:0044322":null}}


id: PATO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel.","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striated","termid":"PATO:0001410"}


id: GO:0009988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell recognition between cells. May involve the formation of specialized cell junctions.","definition_xrefs":["ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell recognition","termid":"GO:0009988"}


id: GO:0039594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any endoribonuclease activity that contributes to the viral-induced catabolism of host mRNA.","definition_xrefs":["PMID:22046136","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete endoribonuclease activity involved in viral induction of host mRNA catabolic process (obsolete GO:0039594)","termid":"GO:0039594"}


id: MONDO:0002282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mosquito-borne viral illness caused by the west nile virus, a flavivirus and endemic to regions of Africa, Asia, and Europe. Common clinical features include headache; fever; maculopapular rash; gastrointestinal symptoms; and lymphadenopathy. meningitis; encephalitis; and myelitis may also occur. The disease may occasionally be fatal or leave survivors with residual neurologic deficits. (From Joynt, Clinical Neurology, 1996, Ch26, p13; Lancet 1998 Sep 5;352(9130):767-71)","definition_xrefs":["MESH:D014901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Flaviviridae infectious disease","termid":"MONDO:0005763"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"West Nile fever","secondary_identifiers":["DOID:2366","ICD9:066.4","ICD9:066.40","MEDGEN:22705","SCTID:417093003","UMLS:C0043124"],"synonyms":[{"name":"West Nile virus caused disease or disorder","type":"exact"},{"name":"West Nile virus disease or disorder","type":"exact"},{"name":"West Nile virus infectious disease","type":"exact"}],"termid":"MONDO:0002282","xrefs":{"Monarch":{"xref_id":"0002282"}}}


id: PBO:0030871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_metabolic_process_during_vegetative_growth","termid":"PBO:0030871"}


id: PBO:0071013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 15","termid":"PBO:0071013"}


id: FYPO:0007758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid cohesion lasts longer than normal, continuing into anaphase of mitosis.","definition_xrefs":["PomBase:mah","PMID:33888556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of mitotic sister chromatid cohesion","synonyms":[{"name":"ectopic cohesion protection during mitosis","type":"related"},{"name":"increased duration of mitotic chromosome cohesion","type":"exact"},{"name":"increased duration of mitotic sister chromatid cohesion during mitotic anaphase","type":"exact"},{"name":"increased duration of mitotic sister chromatid cohesion during mitotic cell cycle","type":"related"},{"name":"increased duration of mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"persistent mitotic sister chromatid cohesion during mitotic anaphase","type":"exact"},{"name":"prolonged mitotic sister chromatid cohesion","type":"exact"}],"termid":"FYPO:0007758"}


id: PBO:0069440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 705, pseudogene","termid":"PBO:0069440"}


id: PBO:0052361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF9 antisense RNA 1","termid":"PBO:0052361"}


id: MONDO:0019630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital ectropion uveae is a rare, genetic, non-syndromic developmental defect of the eye characterized by the presence of iris pigment epithelium on the anterior surface of the iris, anterior insertion of the iris, angle dysgenesis and progressive open-angle glaucoma (the latter may present in infancy or may develop later in life). Patients may manifest with headaches, ocular pain, photophobia, and redness, watering and/or swelling of the eye. It can often be associated with neurofibromatosis and less commonly with other ocular abnormalities.","definition_xrefs":["Orphanet:91491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iridogoniodysgenesis","termid":"MONDO:0011119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital ectropion uveae","secondary_identifiers":["UMLS:C1303012","ICD10CM:Q10.1","GARD:19169","MEDGEN:724517"],"termid":"MONDO:0019630","xrefs":{"Monarch":{"xref_id":"0019630"}}}


id: GO:0019096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which mitochondrial large ribosomal RNA is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pole plasm mitochondrial rRNA localization","termid":"GO:0019095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"pole plasm mitochondrial lrRNA localization","secondary_identifiers":["GO:0048118"],"synonyms":[{"name":"establishment and maintenance of mitochondrial lrRNA localization in pole plasm","type":"exact"},{"name":"oocyte pole plasm mitochondrial lrRNA localization","type":"exact"},{"name":"pole plasm mitochondrial lrRNA localisation","type":"exact"}],"termid":"GO:0019096"}


id: PBO:0063697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate kinase 1 pseudogene 1","termid":"PBO:0063697"}


id: GO:0034765
data:
  {"annotated_genes":["SJAG_03631","SJAG_04551","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113669,91558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[102461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"regulates","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of monoatomic ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ion membrane transport","type":"exact"},{"name":"regulation of ion transmembrane transport","type":"broad"},{"name":"regulation of transmembrane ion transport","type":"exact"}],"termid":"GO:0034765","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: PR:O74964
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit rsc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.03","synonyms":[{"name":"RSC complex subunit rsc1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rsc1","type":"exact"},{"name":"remodel the structure of chromatin complex subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74964"}


id: PBO:0045215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C8","termid":"PBO:0045215"}


id: MONDO:0008142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thiemann disease is a very rare genetic necrotic bone disorder characterized clinically by painless swelling of the proximal interphalangeal joints associated with osteonecrosis of epiphyses followed by osteoarthritic changes, with onset before 25 years of age and often a benign course.","definition_xrefs":["Orphanet:3314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"},{"relation_name":"is_a","term_name":"osteonecrosis of genetic origin","termid":"MONDO:0018383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thiemann disease, familial form","secondary_identifiers":["ICD9:716.84","OMIM:165700","GARD:4131","MEDGEN:82674","UMLS:C0264081","icd11.foundation:67016273","MESH:C537144","SCTID:55166000"],"synonyms":[{"name":"Osteochondrosis of phalangeal epiphyses","type":"exact"},{"name":"THIEMANN disease","type":"related"},{"name":"Thiemann epiphyseal disease","type":"related"},{"name":"Thiemann's disease","type":"related"},{"name":"aseptic necrosis of phalangeal epiphyses","type":"exact"},{"name":"osteoarthropathy of fingers familial","type":"related"},{"name":"osteoarthropathy of fingers, familial","type":"related"},{"name":"osteochondritis of phalangeal epiphyses","type":"exact"}],"termid":"MONDO:0008142","xrefs":{"Monarch":{"xref_id":"0008142"}}}


id: GO:0042040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of a metal into a metallo-molybdopterin complex.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metal incorporation into metallo-molybdopterin complex","termid":"GO:0042040"}


id: GO:0070944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a bacterium by a neutrophil.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"},{"relation_name":"part_of","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil-mediated killing of bacterium","synonyms":[{"name":"neutrophil mediated killing of bacterium","type":"exact"}],"termid":"GO:0070944"}


id: MONDO:0021374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a cerebral hemisphere.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of cerebral hemisphere","secondary_identifiers":["NCIT:C4874","SCTID:126953009","MEDGEN:224729","UMLS:C1263885"],"synonyms":[{"name":"cerebral hemisphere neoplasm","type":"exact"},{"name":"cerebral hemisphere tumor","type":"exact"},{"name":"cerebral hemisphere tumour","type":"exact"},{"name":"cerebral hemispheric neoplasm","type":"exact"},{"name":"cerebral hemispheric tumor","type":"exact"},{"name":"cerebral hemispheric tumour","type":"exact"},{"name":"cerebral neoplasm","type":"exact"},{"name":"cerebral neoplasms","type":"exact"},{"name":"cerebral tumor","type":"exact"},{"name":"cerebral tumour","type":"exact"},{"name":"neoplasm of cerebral hemisphere","type":"exact"},{"name":"neoplasm of cerebral hemispheres","type":"exact"},{"name":"neoplasm of cerebrum","type":"exact"},{"name":"neoplasm of telencephalon","type":"exact"},{"name":"neoplasm of the cerebral hemispheres","type":"exact"},{"name":"neoplasm of the cerebrum","type":"exact"},{"name":"telencephalon neoplasm (disease)","type":"exact"},{"name":"telencephalon tumor","type":"exact"},{"name":"telencephalon tumour","type":"exact"},{"name":"tumor of cerebral hemisphere","type":"exact"},{"name":"tumor of cerebral hemispheres","type":"exact"},{"name":"tumor of cerebrum","type":"exact"},{"name":"tumor of telencephalon","type":"exact"},{"name":"tumor of the cerebral hemispheres","type":"exact"},{"name":"tumor of the cerebrum","type":"exact"},{"name":"tumour of cerebral hemisphere","type":"exact"},{"name":"tumour of cerebral hemispheres","type":"exact"},{"name":"tumour of cerebrum","type":"exact"},{"name":"tumour of telencephalon","type":"exact"},{"name":"tumour of the cerebral hemispheres","type":"exact"},{"name":"tumour of the cerebrum","type":"exact"}],"termid":"MONDO:0021374","xrefs":{"Monarch":{"xref_id":"0021374"}}}


id: PBO:0055363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2792","termid":"PBO:0055363"}


id: PBO:0064381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 3","termid":"PBO:0064381"}


id: GO:0090640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that involves the two-step acylation of sn-glycero-3-phosphocholine to a phosphatidylcholine.","definition_xrefs":["PMID:27758859","MetaCyc:PWY-7470","PMID:24329598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from sn-glycero-3-phosphocholine","termid":"GO:0090640"}


id: MONDO:0015275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Partial atrioventricular canal (PAVC) is a congenital heart malformation characterized by an atrial septal defect (ASD; ostium primum), clefts of mitral and occasionally tricuspid valves, two separate atrioventricular (AV) valve annuli and an intact ventricular septum. The typical symptoms of PAVC are impaired exercise capacity and exertional dyspnea.","definition_xrefs":["Orphanet:1330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrioventricular septal defect","termid":"MONDO:0020290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"partial atrioventricular canal","secondary_identifiers":["UMLS:C4023290","NANDO:2200268","MEDGEN:868879","SCTID:718216009","GARD:4229","MESH:C536112"],"synonyms":[{"name":"PAVC","type":"exact"},{"name":"partial AVSD","type":"related"},{"name":"partial atrioventricular canal defect","type":"exact"},{"name":"partial atrioventricular septal defects","type":"related"},{"name":"partial common atrioventricular canal","type":"related"}],"termid":"MONDO:0015275","xrefs":{"Monarch":{"xref_id":"0015275"}}}


id: PBO:0005895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamine, mitochondrial","termid":"PBO:0005895"}


id: MONDO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormally high level of phosphate in the blood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolism disease","termid":"MONDO:0002319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperphosphatemia","secondary_identifiers":["HP:0002905","DOID:0050459","MESH:D054559","SCTID:20165001","UMLS:C0085681","icd11.foundation:1745515193","MEDGEN:39326"],"synonyms":[{"name":"hyperphosphatemia","type":"exact"},{"name":"hyperphosphatemia (disease)","type":"exact"}],"termid":"MONDO:0000328","xrefs":{"Monarch":{"xref_id":"0000328"}}}


id: PBO:0060546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 intronic transcript 1","termid":"PBO:0060546"}


id: GO:0120298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-noradrenaline + L-glutaminyl-[protein] = 5-(R)-noradrenalinyl-L-glutamyl-[protein] + NH4(+).","definition_xrefs":["GOC:sp","PMID:22858378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"peptide noradrenalinyltransferase activity","secondary_identifiers":["RHEA:66560"],"termid":"GO:0120298"}


id: GO:0050974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a mechanical stimulus is received and converted into a molecular signal as part of sensory perception.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus","termid":"GO:0050982"},{"relation_name":"part_of","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception","synonyms":[{"name":"sensory detection of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during sensory perception","type":"exact"},{"name":"sensory perception, sensory detection of mechanical stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory transduction of mechanical stimulus during sensory perception","type":"exact"}],"termid":"GO:0050974"}


id: PBO:0062446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 111F pseudogene","termid":"PBO:0062446"}


id: PATO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000013 relative age (obsolete PATO:0000013)","termid":"PATO:0000013"}


id: PBO:0064779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1A","termid":"PBO:0064779"}


id: PBO:0042022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 80","termid":"PBO:0042022"}


id: MONDO:0010494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia with linear skin defects syndrome in which the cause of the disease is a mutation in the NDUFB11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear skin defects with multiple congenital anomalies","termid":"MONDO:0010672"},{"relation_name":"is_a","term_name":"NDUFB11-related disorders","termid":"MONDO:1040023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"linear skin defects with multiple congenital anomalies 3","secondary_identifiers":["GARD:15276","OMIM:300952","UMLS:C4225421","DOID:0111876","MEDGEN:906997"],"synonyms":[{"name":"LSDMCA3","type":"related"},{"name":"NDUFB11 microphthalmia with linear skin defects syndrome","type":"exact"},{"name":"linear skin defects with cardiomyopathy and Other congenital anomalies","type":"related"},{"name":"linear skin defects with multiple congenital anomalies 3","type":"exact"},{"name":"linear skin defects with multiple congenital anomalies 3, X-linked dominant","type":"exact"},{"name":"linear skin defects with multiple congenital anomalies type 3","type":"exact"},{"name":"microphthalmia with linear skin defects syndrome caused by mutation in NDUFB11","type":"exact"}],"termid":"MONDO:0010494","xrefs":{"Monarch":{"xref_id":"0010494"}}}


id: PBO:0068869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 109, pseudogene","termid":"PBO:0068869"}


id: PBO:0062229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 2","termid":"PBO:0062229"}


id: GO:0004465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate, where the triacylglycerol is part of a lipoprotein. May also hydrolyze diacylglycerol and phospholipids present in lipoproteins.","definition_xrefs":["EC:3.1.1.34","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triacylglycerol lipase activity","termid":"GO:0004806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lipoprotein lipase activity","secondary_identifiers":["Reactome:R-HSA-8979996","Reactome:R-HSA-2395768","Reactome:R-HSA-1482811","Reactome:R-HSA-174757","Reactome:R-HSA-6789310","Reactome:R-HSA-8980228"],"synonyms":[{"name":"clearing factor lipase activity","type":"related"},{"name":"diacylglycerol hydrolase activity","type":"related"},{"name":"diacylglycerol lipase activity","type":"related"},{"name":"diglyceride lipase activity","type":"related"},{"name":"lipemia-clearing factor","type":"related"},{"name":"postheparin esterase activity","type":"related"},{"name":"postheparin lipase activity","type":"related"},{"name":"triacylglycero-protein acylhydrolase activity","type":"related"}],"termid":"GO:0004465"}


id: MONDO:0020376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset zonular cataract","termid":"MONDO:0020379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"early-onset nuclear cataract","secondary_identifiers":["MEDGEN:1842550","MedDRA:10007759","MedDRA:10057735","Orphanet:98991","MESH:C563333","GARD:16887","UMLS:C5681644"],"termid":"MONDO:0020376","xrefs":{"Monarch":{"xref_id":"0020376"}}}


id: MONDO:0009495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Keutel syndrome is characterized by diffuse cartilage calcification, brachytelephalangism, peripheral pulmonary artery stenoses and facial dysmorphism.","definition_xrefs":["Orphanet:85202"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"chondrodysplasia punctata","termid":"MONDO:0019701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Keutel syndrome","secondary_identifiers":["GARD:8449","SCTID:724208006","UMLS:C1855607","icd11.foundation:1083151379","MEDGEN:383722","MESH:C536167","OMIM:245150"],"synonyms":[{"name":"KEUTEL syndrome","type":"related"},{"name":"KTLS","type":"related"},{"name":"Keutel syndrome","type":"exact"},{"name":"pulmonic stenosis brachytelephalangism and calcification of cartilages","type":"related"},{"name":"pulmonic stenosis, brachytelephalangism, and calcification of cartilages","type":"related"},{"name":"pulmonic stenosis-brachytelephalangism-calcification of cartilages syndrome","type":"exact"}],"termid":"MONDO:0009495","xrefs":{"Monarch":{"xref_id":"0009495"}}}


id: PBO:0035948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_mating_type_locus_during_vegetative_growth","termid":"PBO:0035948"}


id: PBO:0044475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP17A1 antisense RNA 1","termid":"PBO:0044475"}


id: PBO:0087769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of tRNA-specific adenosine-34 deaminase; forms a heterodimer with Tad3p that converts adenosine to inosine at the wobble position of several tRNAs","termid":"PBO:0087769"}


id: MONDO:0024332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Allergic rhinitis caused by indoor allergens and lasting year round.","definition_xrefs":["NCIT:C92189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic rhinitis","termid":"MONDO:0011786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"perennial allergic rhinitis","secondary_identifiers":["SCTID:446096008","UMLS:C0035457","EFO:1001417","icd11.foundation:1273917262","MEDGEN:19783","MESH:D012221"],"synonyms":[{"name":"non-seasonal allergic rhinitis","type":"exact"},{"name":"nonseasonal allergic rhinitis","type":"exact"},{"name":"perennial allergic rhinitis","type":"exact"}],"termid":"MONDO:0024332","xrefs":{"Monarch":{"xref_id":"0024332"}}}


id: PBO:0068248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal 5","termid":"PBO:0068248"}


id: MONDO:0017302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of troponin (obsolete MONDO:0017302)","secondary_identifiers":["Orphanet:284786"],"termid":"MONDO:0017302","xrefs":{"Monarch":{"xref_id":"0017302"}}}


id: GO:0072762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbendazim stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbendazim","termid":"GO:1901597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to carbendazim","termid":"GO:0072762"}


id: PATO:0002439
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angular shape quality inhering in a bearer by virtue of the bearer's having two angles in its length giving the bearer the form of the letter W.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angular","termid":"PATO:0001977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"w-shaped","termid":"PATO:0002439"}


id: GO:0033711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-phospho-D-erythronate + NAD+ = (R)-3-hydroxy-2-oxo-4-phosphonooxybutanoate + H+ + NADH.","definition_xrefs":["RHEA:18829","EC:1.1.1.290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-phosphoerythronate dehydrogenase activity","secondary_identifiers":["MetaCyc:ERYTHRON4PDEHYDROG-RXN","KEGG_REACTION:R04210"],"synonyms":[{"name":"4-O-phosphoerythronate dehydrogenase activity","type":"related"},{"name":"4-phospho-D-erythronate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"4PE dehydrogenase activity","type":"related"},{"name":"PdxB","type":"related"},{"name":"PdxB 4PE dehydrogenase activity","type":"related"},{"name":"erythronate-4-phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0033711"}


id: PBO:0056609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic enzyme 2","termid":"PBO:0056609"}


id: GO:0070329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The substitution of a selenium atom for a sulfur atom in a ribonucleotide in a tRNA molecule.","definition_xrefs":["PMID:14594807","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium compound metabolic process","termid":"GO:0001887"},{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA seleno-modification","synonyms":[{"name":"tRNA base modification to selenouridine","type":"exact"}],"termid":"GO:0070329"}


id: PBO:0054429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1825","termid":"PBO:0054429"}


id: PBO:0089404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (uridine) methyltransferase Trm9","termid":"PBO:0089404"}


id: PBO:0087509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterodimeric nuclear SUMO activating enzyme E1 with Uba2p; activates Smt3p (SUMO) before its conjugation to proteins (sumoylation), which may play a role in protein targeting; essential for viability; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087509"}


id: PBO:0087565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of structure-specific Mms4p-Mus81p endonuclease; cleaves branched DNA; involved in recombination, DNA repair, and joint molecule formation/resolution during meiotic recombination; phosphorylation of the non-catalytic subunit Mms4p by Cdc28p and Cdc5p during mitotic cell cycle activates the function of Mms4p-Mus81p","termid":"PBO:0087565"}


id: PBO:0071905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 43","termid":"PBO:0071905"}


id: PBO:0044371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cylicin 1","termid":"PBO:0044371"}


id: GO:1904404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a formaldehyde stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:9149109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to formaldehyde","termid":"GO:1904404"}


id: FYPO:0004839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the localization of a protein to the plasma membrane is abolished when the cell is subject to glucose starvation, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"},{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane","termid":"FYPO:0004838"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose starvation","synonyms":[{"name":"abolished protein localisation to plasma membrane, with protein mislocalised to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization in plasma membrane, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization to cell membrane, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose depletion","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose deprivation","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose limitation","type":"related"},{"name":"protein localization to plasma membrane abolished, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"}],"termid":"FYPO:0004839"}


id: PBO:0073809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 14","termid":"PBO:0073809"}


id: PBO:0055919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A7, pseudogene","termid":"PBO:0055919"}


id: GO:0047328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-hexose + acyl phosphate = D-hexose phosphate + an acid.","definition_xrefs":["EC:2.7.1.61","MetaCyc:2.7.1.61-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"acyl-phosphate-hexose phosphotransferase activity","secondary_identifiers":["RHEA:13077"],"synonyms":[{"name":"acyl-phosphate:D-hexose phosphotransferase activity","type":"related"},{"name":"hexose phosphate:hexose phosphotransferase activity","type":"related"}],"termid":"GO:0047328"}


id: GO:1903314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nitrogen cycle metabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071941"],"is_obsolete":false,"name":"regulation of nitrogen cycle metabolic process","termid":"GO:1903314"}


id: PR:O14196
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug165 gene.","definition_xrefs":["UniProtKB:O14196","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 165 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.02c","synonyms":[{"name":"Spom972h-mug165","type":"exact"}],"termid":"PR:O14196"}


id: PBO:0074823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 19C","termid":"PBO:0074823"}


id: GO:0000183
data:
  {"annotated_genes":["SJAG_02723","SJAG_01579","SJAG_02778","SJAG_03255","SJAG_01075","SJAG_03982","SJAG_00934","SJAG_03844","SJAG_04039"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71174,72553,92414,104407,108469,112416,113602],"is_not":false,"summary":null,"term":"GO:0000183"},{"annotations":[77632,106968],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0061188"}]},"cv_name":"biological_process","definition":"The formation of heterochromatin at ribosomal DNA, characterized by the modified histone H3K9me3.","definition_xrefs":["PMID:10219245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facultative heterochromatin formation","termid":"GO:0140718"},{"relation_name":"part_of","term_name":"nucleolar chromatin organization","termid":"GO:1990700"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00934":null,"SJAG_01075":null,"SJAG_01579":null,"SJAG_02723":null,"SJAG_02778":null,"SJAG_03255":null,"SJAG_03844":null,"SJAG_03982":null,"SJAG_04039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"rDNA heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-427359","Reactome:R-HSA-427413"],"synonyms":[{"name":"chromatin silencing at rDNA","type":"related"},{"name":"chromatin silencing at ribosomal DNA","type":"broad"},{"name":"heterochromatic silencing at rDNA","type":"broad"},{"name":"rDNA chromatin silencing","type":"broad"},{"name":"rDNA heterochromatin assembly","type":"exact"}],"termid":"GO:0000183","terms_by_termid":{"GO:0000183":null,"GO:0061188":null}}


id: PBO:0063864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 2","termid":"PBO:0063864"}


id: PBO:0046812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor XII","termid":"PBO:0046812"}


id: PBO:0083921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formylglycinamidine-ribonucleotide (FGAM)-synthetase; catalyzes a step in the 'de novo' purine nucleotide biosynthetic pathway","termid":"PBO:0083921"}


id: MONDO:0015385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete external auditory canal aplasia/hypoplasia (obsolete MONDO:0015385)","secondary_identifiers":["icd11.foundation:534621578","Orphanet:141074"],"synonyms":[{"name":"external auditory canal stenosis/atresia","type":"exact"}],"termid":"MONDO:0015385","xrefs":{"Monarch":{"xref_id":"0015385"}}}


id: FYPO:0002317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of squalene measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular squalene level","synonyms":[{"name":"increased cellular squalene level during mitotic cell cycle","type":"related"},{"name":"increased cellular squalene level during vegetative growth","type":"exact"},{"name":"increased squalene accumulation","type":"related"}],"termid":"FYPO:0002317"}


id: FYPO:0004457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus","termid":"FYPO:0004455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to nucleus during nitrogen starvation","synonyms":[{"name":"decreased protein localisation to nucleus during nitrogen starvation","type":"exact"},{"name":"decreased protein localization to nucleus during nitrogen depletion","type":"exact"},{"name":"decreased protein localization to nucleus during nitrogen deprivation","type":"exact"},{"name":"reduced protein localization to nucleus during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004457"}


id: MONDO:0001044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality of the esophagus in which the upper esophagus ends as a blind pouch and does not connect with the lower esophagus; it is often accompanied by a tracheoesophageal fistula. Signs and symptoms in a newborn with this abnormality include excessive salivation, choking, coughing, and the development of cyanosis and respiratory distress when fed.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophageal atresia","secondary_identifiers":["NCIT:C87072","HP:0002032","UMLS:C0014850","MESH:D004933","ICD9:750.3","DOID:10485","MEDGEN:4545","SCTID:26179002"],"synonyms":[{"name":"congenital atresia of esophagus","type":"exact"},{"name":"congenital atresia of oesophagus","type":"exact"},{"name":"congenital esophageal atresia","type":"exact"},{"name":"congenital imperforate esophagus","type":"exact"},{"name":"congenital imperforate oesophagus","type":"exact"},{"name":"esophageal atresia","type":"exact"},{"name":"esophageal atresia (disease)","type":"exact"},{"name":"imperforate esophagus","type":"exact"},{"name":"imperforate oesophagus","type":"exact"},{"name":"oesophageal atresia","type":"exact"}],"termid":"MONDO:0001044","xrefs":{"Monarch":{"xref_id":"0001044"}}}


id: GO:0090118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A receptor-mediated endocytosis process involved in intracellular cholesterol transport.","definition_xrefs":["GOC:dph","GOC:pr","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"},{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"part_of","term_name":"intracellular cholesterol transport","termid":"GO:0032367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"receptor-mediated endocytosis involved in cholesterol transport","synonyms":[{"name":"receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"receptor-mediated endocytosis of LDL","type":"related"},{"name":"receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"}],"termid":"GO:0090118"}


id: MONDO:0017088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated amyelia","secondary_identifiers":["Orphanet:268868","GARD:20976","icd11.foundation:1787577133"],"termid":"MONDO:0017088","xrefs":{"Monarch":{"xref_id":"0017088"}}}


id: PBO:0044920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome critical region gene 6","termid":"PBO:0044920"}


id: PBO:0050484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXA11 antisense RNA","termid":"PBO:0050484"}


id: PBO:0030047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ferric_iron_import","termid":"PBO:0030047"}


id: PR:P78871
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rst2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein rst2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.02","synonyms":[{"name":"Spom972h-rst2","type":"exact"}],"termid":"PR:P78871"}


id: PBO:0074403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 10 like 2A","termid":"PBO:0074403"}


id: PATO:0001493
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"growth rate","termid":"PATO:0001492"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic growth","termid":"PATO:0001493"}


id: PBO:0036051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_cortex_of_cell_tip","termid":"PBO:0036051"}


id: PBO:0002134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prevacuole/endosomal FYVE tethering component Pep7 (predicted)","termid":"PBO:0002134"}


id: MONDO:0016178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peripheral neuropathy associated with monoclonal gammopathy (obsolete MONDO:0016178)","secondary_identifiers":["Orphanet:209010"],"termid":"MONDO:0016178","xrefs":{"Monarch":{"xref_id":"0016178"}}}


id: PR:Q10323
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- imt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphoceramide mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.11c","synonyms":[{"name":"IPC mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-imt3","type":"exact"}],"termid":"PR:Q10323"}


id: FYPO:0003967
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is lover than normal when the population in which the cell is found is in stationary phase. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level in stationary phase","synonyms":[{"name":"decreased protein accumulation in stationary phase","type":"related"},{"name":"reduced protein level in stationary phase","type":"exact"}],"termid":"FYPO:0003967"}


id: PBO:0042129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical carcinoma expressed PCNA regulatory lncRNA","termid":"PBO:0042129"}


id: PR:Q10170
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26A3.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine N-methyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.17c","synonyms":[{"name":"Spom972h-SPAC26A3.17c","type":"exact"},{"name":"protein-arginine N5-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type IV PRMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type IV protein arginine N-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10170"}


id: MONDO:0003690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anaplastic ependymoma occurring in adults.","definition_xrefs":["NCIT:C8269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaplastic ependymoma","termid":"MONDO:0016700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult anaplastic ependymoma","secondary_identifiers":["DOID:5890","MEDGEN:83709","UMLS:C0280787"],"synonyms":[{"name":"adult anaplastic ependymoma","type":"exact"},{"name":"adult malignant ependymoma","type":"exact"},{"name":"anaplastic ependymoma","type":"broad"},{"name":"anaplastic ependymoma of adults","type":"exact"},{"name":"malignant adult ependymoma","type":"exact"}],"termid":"MONDO:0003690","xrefs":{"Monarch":{"xref_id":"0003690"}}}


id: PBO:0069971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1266, pseudogene","termid":"PBO:0069971"}


id: MONDO:0021276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that involves the buccal mucosa.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"},{"relation_name":"is_a","term_name":"benign neoplasm of buccal mucosa","termid":"MONDO:0021524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papilloma of buccal mucosa","secondary_identifiers":["ICD9:210.4","MEDGEN:231971","NCIT:C5819","SCTID:448147005","UMLS:C1332641"],"synonyms":[{"name":"buccal mucosa papilloma","type":"exact"},{"name":"papilloma of the buccal mucosa","type":"exact"}],"termid":"MONDO:0021276","xrefs":{"Monarch":{"xref_id":"0021276"}}}


id: MONDO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Excessive clenching of the jaw and grinding of the teeth.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bruxism","secondary_identifiers":["ICD9:327.53","DOID:2846","MESH:D002012","UMLS:C0006325","MEDGEN:676","HP:0003763","icd11.foundation:1046319083"],"synonyms":[{"name":"bruxism","type":"exact"},{"name":"bruxism (disease)","type":"exact"},{"name":"bruxism - teeth grinding","type":"exact"},{"name":"grinding teeth","type":"exact"},{"name":"sleep related bruxism","type":"exact"},{"name":"teeth grinding","type":"exact"}],"termid":"MONDO:0002443","xrefs":{"Monarch":{"xref_id":"0002443"}}}


id: GO:0002172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with high affinity with an immunoglobulin of an IgM isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgM receptor activity","termid":"GO:0001793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"high-affinity IgM receptor activity","synonyms":[{"name":"high affinity IgM receptor activity","type":"exact"}],"termid":"GO:0002172"}


id: GO:0032253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a dense core granule is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule localization","termid":"GO:0032252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"dense core granule localization","synonyms":[{"name":"dense core granule clustering","type":"related"},{"name":"dense core granule localisation","type":"exact"},{"name":"dense core vesicle localization","type":"exact"}],"termid":"GO:0032253"}


id: MONDO:0007949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Marshall syndrome is a malformation syndrome that is characterized by facial dysmorphism, severe hypoplasia of the nasal bones and frontal sinuses, ocular involvement, early-onset hearing loss, skeletal and anhidrotic ectodermal anomalies and short stature with spondyloepiphyseal dysplasia and early-onset osteoarthritis.","definition_xrefs":["Orphanet:560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328","MONDO:0005497"],"is_obsolete":false,"name":"Marshall syndrome","secondary_identifiers":["ICD9:759.89","icd11.foundation:1401051186","MESH:C536025","MEDGEN:82694","GARD:6984","NCIT:C128115","DOID:0111510","NORD:1407","OMIM:154780","UMLS:C0265235","SCTID:33410002"],"synonyms":[{"name":"MRSHS","type":"related"},{"name":"Marshall syndrome","type":"exact"},{"name":"deafness, myopia, cataract, saddle nose-Marshall type","type":"related"}],"termid":"MONDO:0007949","xrefs":{"Monarch":{"xref_id":"0007949"}}}


id: PBO:0080690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNK lysine deficient protein kinase 2","termid":"PBO:0080690"}


id: GO:0036108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate, a precursor of 4-amino-4-deoxy-L-arabinose (L-Ara4N).","definition_xrefs":["GOC:yaf","PMID:15695810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate metabolic process","termid":"GO:0036107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process","synonyms":[{"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate anabolism","type":"exact"},{"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthesis","type":"exact"},{"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate formation","type":"exact"},{"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate synthesis","type":"exact"},{"name":"undecaprenyl phosphate alpha-L-Ara4N biosynthesis","type":"exact"}],"termid":"GO:0036108"}


id: PBO:0069307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 563, pseudogene","termid":"PBO:0069307"}


id: GO:0071004
data:
  {"annotated_genes":["SJAG_05009","SJAG_03995","SJAG_01654","SJAG_04214","SJAG_00249","SJAG_00504","SJAG_00498","SJAG_01301","SJAG_02844","SJAG_00859","SJAG_00322","SJAG_04911","SJAG_00809","SJAG_00911","SJAG_04163","SJAG_02279","SJAG_01008","SJAG_00577","SJAG_05240","SJAG_03469","SJAG_04318","SJAG_00147","SJAG_02304","SJAG_00225","SJAG_03210","SJAG_03547","SJAG_00058","SJAG_02185","SJAG_00474","SJAG_01870","SJAG_02558","SJAG_03983"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70401,70822,72476,72726,73504,74258,74405,76223,77057,79214,79910,88858,93720,95514,95934,96667,101563,102055,102859,105835,106195,106722,107258,109076,109810,110363,110950,112674,112961,113583,114154,119018],"is_not":false,"summary":null,"term":"GO:0071004"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by association of the 5' splice site with the U1 snRNP, while the branch point sequence is recognized by the U2 snRNP. The prespliceosome includes many proteins in addition to those found in the U1 and U2 snRNPs. Commitment to a given pair of 5' and 3' splice sites occurs at the time of prespliceosome formation.","definition_xrefs":["GOC:ab","PMID:19239890","GOC:mah","GOC:krc","PMID:17332742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"},{"relation_name":"is_a","term_name":"prespliceosome","termid":"GO:0071010"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00322":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00577":null,"SJAG_00809":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01301":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02558":null,"SJAG_02844":null,"SJAG_03210":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04318":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"U2-type prespliceosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG prespliceosome","type":"narrow"},{"name":"major prespliceosome","type":"exact"},{"name":"mammalian U2-type spliceosomal complex A","type":"narrow"},{"name":"yeast U2-type spliceosomal complex B","type":"narrow"}],"termid":"GO:0071004","terms_by_termid":{"GO:0071004":null}}


id: PBO:0078829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 6-1","termid":"PBO:0078829"}


id: GO:0006157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyadenosine metabolic process","termid":"GO:0046090"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside catabolic process","termid":"GO:0046124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"deoxyadenosine catabolic process","secondary_identifiers":["GO:0006159"],"synonyms":[{"name":"deoxyadenosine breakdown","type":"exact"},{"name":"deoxyadenosine catabolism","type":"exact"},{"name":"deoxyadenosine degradation","type":"exact"},{"name":"deoxyadenosine phosphorolysis","type":"related"}],"termid":"GO:0006157"}


id: PBO:0077095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell immunoglobulin and mucin domain containing 4","termid":"PBO:0077095"}


id: PBO:0086692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; induced by treatment with 8-methoxypsoralen and UVA irradiation; null mutant is sensitive to expression of the top1-T722A allele; SWAT-GFP and mCherry fusion proteins localize to the cell periphery and vacuole; TDA6 has a paralog, VPS62, that arose from the whole genome duplication","termid":"PBO:0086692"}


id: MONDO:0019299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete unclassified genetic skin disorder (obsolete MONDO:0019299)","secondary_identifiers":["Orphanet:79385"],"termid":"MONDO:0019299","xrefs":{"Monarch":{"xref_id":"0019299"}}}


id: GO:0044824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The catalysis of the removal of two di- or tri-nucleotides from each 3' end of double-stranded viral DNA, exposing recessed 3' hydroxyls.","definition_xrefs":["PMID:22580823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"},{"relation_name":"part_of","term_name":"retroviral integrase activity","termid":"GO:0044823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"part_of","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"part_of","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"retroviral 3' processing activity","synonyms":[{"name":"3' processing reaction","type":"exact"},{"name":"3'-processing activity","type":"exact"}],"termid":"GO:0044824"}


id: GO:0061059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the peptidoglycan recognition protein signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidoglycan recognition protein signaling pathway","termid":"GO:0061058"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of defense response to bacterium","termid":"GO:1900426"},{"relation_name":"positively_regulates","term_name":"peptidoglycan recognition protein signaling pathway","termid":"GO:0061057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidoglycan recognition protein signaling pathway","synonyms":[{"name":"positive regulation of peptidoglycan recognition protein signalling pathway","type":"exact"}],"termid":"GO:0061059"}


id: PBO:0000856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family protein (predicted)","termid":"PBO:0000856"}


id: PBO:0029414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_branched,_elongated_germ_tube","termid":"PBO:0029414"}


id: MONDO:0010537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A X-linked yndrome characterized by intellectual deficit, truncal obesity, characteristic facial features, hypogonadism, tapered fingers and short toes.","definition_xrefs":["Orphanet:127"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic obesity (obsolete MONDO:0016565)","termid":"MONDO:0016565"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"obsolete eyelids malposition disorder (obsolete MONDO:0020158)","termid":"MONDO:0020158"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Borjeson-Forssman-Lehmann syndrome","secondary_identifiers":["OMIM:301900","UMLS:C0265339","SCTID:21634003","ICD9:759.89","NORD:866","DOID:0050681","MEDGEN:78557","MESH:C536575","GARD:936"],"synonyms":[{"name":"BFLS","type":"exact"},{"name":"BORJ","type":"exact"},{"name":"Borjeson syndrome","type":"exact"},{"name":"Borjeson-FORSSMAN-Lehmann syndrome","type":"related"},{"name":"Borjeson-Forssman-Lehmann syndrome","type":"exact"},{"name":"Borjeson-Forssman-Lehmann syndrome, X-linked recessive","type":"exact"},{"name":"Börjeson-Forssman-Lehman Syndrome","type":"exact"},{"name":"MRXSBFL","type":"exact"},{"name":"intellectual deficiency-epilepsy-endocrine disorders syndrome","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Borjeson-Forssman-Lehmann type","type":"related"},{"name":"intellectual disability, epilepsy, and endocrine disorder","type":"exact"},{"name":"intellectual disability, epilepsy, and endocrine disorders","type":"related"},{"name":"intellectual disability-epilepsy-endocrine disorders syndrome","type":"exact"},{"name":"mental deficiency, epilepsy and endocrine disorders","type":"related"},{"name":"mental retardation, X-linked, syndromic, Borjeson-Forssman-Lehmann type","type":"related"},{"name":"mental retardation, epilepsy, and endocrine disorder","type":"exact"},{"name":"mental retardation, epilepsy, and endocrine disorders","type":"related"},{"name":"syndromic X-linked intellectual disability Borjeson-Forssman-Lehmann type","type":"exact"},{"name":"syndromic X-linked mental retardation Borjeson-Forssman-Lehmann type","type":"exact"}],"termid":"MONDO:0010537","xrefs":{"Monarch":{"xref_id":"0010537"}}}


id: PR:O94640
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sir2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent histone deacetylase sir2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.07c","synonyms":[{"name":"Spom972h-sir2","type":"exact"},{"name":"regulatory protein sir2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"silent information regulator 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94640"}


id: PBO:0108919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG3 cohesin complex component like 5, pseudogene","termid":"PBO:0108919"}


id: PBO:0063827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired like homeobox 2B","termid":"PBO:0063827"}


id: GO:0033358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-L-arabinose, uridinediphosphoarabinose, a substance composed of arabinose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["MetaCyc:PWY-82","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-L-arabinose metabolic process","termid":"GO:0033356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"UDP-L-arabinose biosynthetic process","synonyms":[{"name":"UDP-L-arabinose anabolism","type":"exact"},{"name":"UDP-L-arabinose biosynthesis","type":"exact"},{"name":"UDP-L-arabinose formation","type":"exact"},{"name":"UDP-L-arabinose synthesis","type":"exact"}],"termid":"GO:0033358"}


id: PBO:0060007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 27","termid":"PBO:0060007"}


id: PR:Q9Y7X9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA/RNA-binding protein KIN17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12805:SF0","PRO:DNx","OMA:SCHPO03308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIN17-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.09c","secondary_identifiers":["UniProtKB:Q9Y7X9"],"synonyms":[{"name":"Spom972h-KIN","type":"exact"}],"termid":"PR:Q9Y7X9"}


id: PR:Q9Y7U4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nse3 gene.","definition_xrefs":["UniProtKB:Q9Y7U4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosome element 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.04","synonyms":[{"name":"Spom972h-nse3","type":"exact"},{"name":"non-SMC element 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7U4"}


id: GO:0102625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cirsimaritin + S-adenosyl-L-methionine = H+ + S-adenosyl-L-homocysteine + salvigenin.","definition_xrefs":["RHEA:73251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"cirsimaritin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15530"],"termid":"GO:0102625"}


id: GO:0016550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The insertion into or deletion from an RNA molecule of nucleotide residues not encoded in DNA; takes place during or after transcription.","definition_xrefs":["PMID:11092837"],"gene_count":0,"genotype_count":0,"name":"obsolete insertion or deletion editing (obsolete GO:0016550)","synonyms":[{"name":"insertion or deletion editing","type":"exact"},{"name":"insertion/deletion editing","type":"exact"}],"termid":"GO:0016550"}


id: GO:0050459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phosphoethanolamine = acetaldehyde + NH4 + phosphate.","definition_xrefs":["EC:4.2.3.2","RHEA:17889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ethanolamine-phosphate phospho-lyase activity","secondary_identifiers":["KEGG_REACTION:R00748","MetaCyc:ETHANOLAMINE-PHOSPHATE-PHOSPHO-LYASE-RXN","Reactome:R-HSA-5696415"],"synonyms":[{"name":"O-phosphoethanolamine-phospholyase activity","type":"related"},{"name":"O-phosphorylethanol-amine phospho-lyase activity","type":"related"},{"name":"amino alcohol O-phosphate phospholyase activity","type":"broad"},{"name":"ethanolamine-phosphate phospho-lyase (deaminating)","type":"related"},{"name":"ethanolamine-phosphate phospho-lyase (deaminating; acetaldehyde-forming)","type":"related"}],"termid":"GO:0050459"}


id: MONDO:1011611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Von Willebrand disease that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Von Willebrand disease, non-human animal","termid":"MONDO:1011411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Von Willebrand disease, cattle","secondary_identifiers":["OMIA:001056-9913"],"termid":"MONDO:1011611","xrefs":{"Monarch":{"xref_id":"1011611"}}}


id: GO:0050924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a motile cell or organism towards a lower concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"regulation of negative chemotaxis","termid":"GO:0050923"},{"relation_name":"positively_regulates","term_name":"negative chemotaxis","termid":"GO:0050919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of negative chemotaxis","synonyms":[{"name":"activation of negative chemotaxis","type":"narrow"},{"name":"stimulation of negative chemotaxis","type":"narrow"},{"name":"up regulation of negative chemotaxis","type":"exact"},{"name":"up-regulation of negative chemotaxis","type":"exact"},{"name":"upregulation of negative chemotaxis","type":"exact"}],"termid":"GO:0050924"}


id: PBO:0045684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 4","termid":"PBO:0045684"}


id: GO:0140550
data:
  {"annotated_genes":["SJAG_02657","SJAG_02613"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117837,119279],"is_not":false,"summary":null,"term":"GO:0140550"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of phosphatidylinositol-4,5-bisphosphate.","definition_xrefs":["PMID:33172987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid sensor activity","termid":"GO:0106254"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02613":null,"SJAG_02657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0140299","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylinositol-4,5-bisphosphate sensing activity","type":"exact"}],"termid":"GO:0140550","terms_by_termid":{"GO:0140550":null}}


id: PBO:0029756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_modification","termid":"PBO:0029756"}


id: PATO:0001829
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of female and external sexual characteristics of male.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohermaphrodite","termid":"PATO:0001827"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female pseudohermaphrodite","termid":"PATO:0001829"}


id: PBO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit 2","termid":"PBO:0001877"}


id: PBO:0073848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A3","termid":"PBO:0073848"}


id: MONDO:0020005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare endocrine system disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare endocrine disease (obsolete MONDO:0020005)","secondary_identifiers":["Orphanet:97978"],"synonyms":[{"name":"rare endocrine system disease","type":"exact"}],"termid":"MONDO:0020005","xrefs":{"Monarch":{"xref_id":"0020005"}}}


id: PBO:0048097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 18","termid":"PBO:0048097"}


id: PBO:0028649
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mRNA_splicing,_via_spliceosome","termid":"PBO:0028649"}


id: PBO:0051991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JAKMIP2 antisense RNA 1","termid":"PBO:0051991"}


id: GO:0120263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heterochromatin organization.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin organization","termid":"GO:0120261"},{"relation_name":"is_a","term_name":"positive regulation of chromatin organization","termid":"GO:1905269"},{"relation_name":"positively_regulates","term_name":"heterochromatin organization","termid":"GO:0070828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"positive regulation of heterochromatin organization","synonyms":[{"name":"activation of heterochromatin organization","type":"narrow"},{"name":"stimulation of heterochromatin organization","type":"narrow"},{"name":"up regulation of heterochromatin organization","type":"exact"},{"name":"up-regulation of heterochromatin organization","type":"exact"},{"name":"upregulation of heterochromatin organization","type":"exact"}],"termid":"GO:0120263"}


id: GO:1900515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xylose catabolic process to ethanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fermentation","termid":"GO:0043465"},{"relation_name":"is_a","term_name":"regulation of D-xylose catabolic process","termid":"GO:0043469"},{"relation_name":"regulates","term_name":"D-xylose catabolic process to ethanol","termid":"GO:0044577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of xylose catabolic process to ethanol","synonyms":[{"name":"regulation of xylose catabolism to ethanol","type":"exact"}],"termid":"GO:1900515"}


id: PBO:0004232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ClC chloride channel (predicted)","termid":"PBO:0004232"}


id: PR:O13924
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hrk1 gene.","definition_xrefs":["UniProtKB:O13924","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase haspin homolog hrk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.03","synonyms":[{"name":"Spom972h-hrk1","type":"exact"}],"termid":"PR:O13924"}


id: GO:0016500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a protein hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"protein-hormone receptor activity","termid":"GO:0016500"}


id: PBO:0075081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 131","termid":"PBO:0075081"}


id: PR:O59767
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle assembly checkpoint component MAD3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:KER","PMID:11909965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle assembly checkpoint component MAD3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.01c","secondary_identifiers":["UniProtKB:O59767","PR:000035573"],"synonyms":[{"name":"SPCC1795.01C","type":"related"},{"name":"SPCC895.02","type":"related"},{"name":"Spom972h-MAD3","type":"exact"},{"name":"mitotic spindle checkpoint component mad3","type":"exact"}],"termid":"PR:O59767"}


