# terms

id: FYPO:0001607
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-aspartate measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in vacuole","termid":"FYPO:0001602"},{"relation_name":"is_a","term_name":"decreased cellular aspartate level","termid":"FYPO:0001613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased vacuolar aspartate level","synonyms":[{"name":"decreased level of aspartate in vacuole","type":"exact"},{"name":"decreased vacuolar L-aspartate level","type":"exact"},{"name":"decreased vacuolar aspartate level during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar aspartate level during vegetative growth","type":"exact"},{"name":"decreased vacuolar aspartic acid level","type":"related"},{"name":"reduced level of aspartate in vacuole","type":"exact"},{"name":"reduced vacuolar aspartate level","type":"exact"}],"termid":"FYPO:0001607"}


id: FYPO:0008307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell divides with a smaller diameter than normal (i.e. compared to wild-type cells under the same conditions).","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable thin vegetative cell","termid":"FYPO:0001877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"decreased cell diameter at division","termid":"FYPO:0008307"}


id: PBO:0081250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 22","termid":"PBO:0081250"}


id: MONDO:0011408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 10 (SPG10) is a rare type of hereditary spastic paraplegia that can present as either a pure form of spastic paraplegia with lower limb spasticity, hyperreflexia and extensor plantar responses, presenting in childhood or adolescence, or as a complex phenotype associated with additional manifestations including peripheral neuropathy with upper limb amyotrophy, moderate intellectual disability and parkinsonism. Deafness and retinitis pigmentosa were reported in one case.","definition_xrefs":["Orphanet:100991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 10","secondary_identifiers":["UMLS:C1858712","GARD:9590","MESH:C537482","OMIM:604187","DOID:0110763","SCTID:732948003","MEDGEN:349003"],"synonyms":[{"name":"KIF5A hereditary spastic paraplegia","type":"exact"},{"name":"SPG10","type":"exact"},{"name":"autosomal dominant spastic paraplegia","type":"related"},{"name":"autosomal dominant spastic paraplegia 10","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 10","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in KIF5A","type":"exact"},{"name":"hereditary spastic paraplegia type 10","type":"exact"},{"name":"spastic paraplegia 10","type":"related"},{"name":"spastic paraplegia 10 with or without peripheral neuropathy","type":"related"},{"name":"spastic paraplegia 10, autosomal dominant","type":"related"}],"termid":"MONDO:0011408","xrefs":{"Monarch":{"xref_id":"0011408"}}}


id: PBO:0055478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2911","termid":"PBO:0055478"}


id: PBO:0070878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 9","termid":"PBO:0070878"}


id: PBO:0027763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_prospore_membrane_during_meiosis_II_with_protein_mislocalized_to_plasma_membrane","termid":"PBO:0027763"}


id: PBO:0075885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6GAL2 intronic transcript 1","termid":"PBO:0075885"}


id: PATO:0002080
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A broken quality inhering in a bearer by virtue of the bearer's being seperated into two contiguous wholes.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"broken","termid":"PATO:0001444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"broken into two pieces","termid":"PATO:0002080"}


id: PBO:0087485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cohesin loading factor (Scc2p-Scc4p); a complex required for loading of cohesin complexes onto chromosomes; involved in establishing sister chromatid cohesion during DSB repair via histone H2AX; promotes gene expression program that supports translational fidelity; evolutionarily-conserved adherin; relocalizes to cytosol in response to hypoxia; human disorder Cornelia de Lange syndrome is caused by mutations in NIPBL, the human ortholog of SCC2; conserved role in NHEJ","termid":"PBO:0087485"}


id: PBO:0081296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 76","termid":"PBO:0081296"}


id: GO:1990619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of an acetyl group from lysine at position 9 of the histone.","definition_xrefs":["PMID:25002536"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 deacetylation (obsolete GO:1990619)","termid":"GO:1990619"}


id: PBO:0067112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 154, pseudogene","termid":"PBO:0067112"}


id: PBO:0050649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class A member 5, pseudogene","termid":"PBO:0050649"}


id: PBO:0068747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 2, pseudogene","termid":"PBO:0068747"}


id: GO:0102083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydromonapterin = glycolaldehyde + 2-amino-6-(hydroxymethyl)-7,8-dihydropteridin-4-ol.","definition_xrefs":["GOC:pz","PMID:15107504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"7,8-dihydromonapterin aldolase activity","secondary_identifiers":["MetaCyc:RXN-10857"],"termid":"GO:0102083"}


id: PBO:0085016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formyltyrosine oxidase; sporulation-specific microsomal enzyme involved in the production of N,N-bisformyl dityrosine required for spore wall maturation, homologous to cytochrome P-450s; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0085016"}


id: PBO:0065474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 12","termid":"PBO:0065474"}


id: GO:0150115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell-substrate junction. A cell-substrate junction is a specialized region of connection between a cell and the extracellular matrix.","definition_xrefs":["PMID:16805308","PMID:26923917","GOC:aruk","PMID:1643657","PMID:10419689","GOC:bc","PMID:8314002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-substrate junction organization","termid":"GO:0150115"}


id: PBO:0075610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speckle type BTB/POZ protein like","termid":"PBO:0075610"}


id: MONDO:0003900
data:
  {"annotated_genes":["SJAG_04380","SJAG_00031","SJAG_04118","SJAG_03805","SJAG_02855","SJAG_04969","SJAG_01344","SJAG_03881","SJAG_03596","SJAG_03453","SJAG_02039","SJAG_01884","SJAG_04541","SJAG_01349","SJAG_01474","SJAG_02763","SJAG_04077","SJAG_01151","SJAG_05213","SJAG_05979","SJAG_01748","SJAG_04569","SJAG_00321","SJAG_04865","SJAG_03151","SJAG_01013","SJAG_04287","SJAG_00400","SJAG_04290","SJAG_00853","SJAG_05239","SJAG_03429","SJAG_03785","SJAG_03905"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87712,87559,87557,87711,87556,87558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[85698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012429"},{"annotations":[85529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"},{"annotations":[85532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"},{"annotations":[85618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"},{"annotations":[87625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014629"},{"annotations":[87580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013944"},{"annotations":[85526,85524,85525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009925"},{"annotations":[86517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"},{"annotations":[85685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[87141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007205"},{"annotations":[86379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007483"},{"annotations":[86998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"},{"annotations":[87101,87102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[86020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[86021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"},{"annotations":[86244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012316"},{"annotations":[85426,85427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[87037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"},{"annotations":[87097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054698"},{"annotations":[86908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054700"},{"annotations":[85781,85782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054699"},{"annotations":[85481,85482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011462"},{"annotations":[86782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[86633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"},{"annotations":[86250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026777"},{"annotations":[86000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010523"}]},"cv_name":"mondo","definition":"A disease involving the connective tissue.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00321":null,"SJAG_00400":null,"SJAG_00853":null,"SJAG_01013":null,"SJAG_01151":null,"SJAG_01344":null,"SJAG_01349":null,"SJAG_01474":null,"SJAG_01748":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_02763":null,"SJAG_02855":null,"SJAG_03151":null,"SJAG_03429":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03785":null,"SJAG_03805":null,"SJAG_03881":null,"SJAG_03905":null,"SJAG_04077":null,"SJAG_04118":null,"SJAG_04287":null,"SJAG_04290":null,"SJAG_04380":null,"SJAG_04541":null,"SJAG_04569":null,"SJAG_04865":null,"SJAG_04969":null,"SJAG_05213":null,"SJAG_05239":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"connective tissue disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1001986","DOID:65","NCIT:C26729","MEDGEN:1098","NANDO:2100172","SCTID:105969002","MESH:D003240","UMLS:C0009782"],"synonyms":[{"name":"connective tissue disease","type":"exact"},{"name":"connective tissue disease or disorder","type":"exact"},{"name":"connective tissue diseases","type":"exact"},{"name":"connective tissue disorder","type":"exact"},{"name":"connective tissue disorders","type":"exact"},{"name":"disease of connective tissue","type":"exact"},{"name":"disease or disorder of connective tissue","type":"exact"},{"name":"disease, connective tissue","type":"exact"},{"name":"disorder of connective tissue","type":"exact"},{"name":"primary disorder of connective tissue","type":"exact"},{"name":"tissue disease, connective","type":"exact"}],"termid":"MONDO:0003900","terms_by_termid":{"MONDO:0002629":null,"MONDO:0007205":null,"MONDO:0007483":null,"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0007908":null,"MONDO:0009050":null,"MONDO:0009849":null,"MONDO:0009925":null,"MONDO:0010523":null,"MONDO:0010621":null,"MONDO:0011462":null,"MONDO:0012316":null,"MONDO:0012429":null,"MONDO:0012471":null,"MONDO:0012472":null,"MONDO:0012481":null,"MONDO:0013766":null,"MONDO:0013818":null,"MONDO:0013944":null,"MONDO:0014007":null,"MONDO:0014629":null,"MONDO:0018874":null,"MONDO:0024541":null,"MONDO:0026777":null,"MONDO:0054698":null,"MONDO:0054699":null,"MONDO:0054700":null},"xrefs":{"Monarch":{"xref_id":"0003900"}}}


id: PBO:0012289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human LAMTOR2 ortholog","termid":"PBO:0012289"}


id: MONDO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute or chronic inflammation of one or more lymph nodes. It is usually caused by an infectious process.","definition_xrefs":["NCIT:C26821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymph node disorder","termid":"MONDO:0004928"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphadenitis","secondary_identifiers":["DOID:1602","ICD9:683","icd11.foundation:1483611415","MESH:D008199","ICD9:289.1","HP:0002840","MEDGEN:7410","SCTID:41174002","UMLS:C0024205"],"synonyms":[{"name":"Inflammation of lymph node","type":"exact"},{"name":"acute adenitis","type":"narrow"},{"name":"acute lymphadenitis","type":"narrow"},{"name":"adenitis","type":"exact"},{"name":"chronic adenitis","type":"narrow"},{"name":"chronic lymphadenitis","type":"narrow"},{"name":"inflammation of lymph node","type":"exact"},{"name":"lymph gland infection","type":"related"},{"name":"lymph node inflammation","type":"exact"},{"name":"lymph nodeitis","type":"exact"},{"name":"lymphadenitis","type":"exact"},{"name":"lymphadenitis (disease)","type":"exact"}],"termid":"MONDO:0002052","xrefs":{"Monarch":{"xref_id":"0002052"}}}


id: MONDO:0021506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the spinal cord.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of spinal cord","secondary_identifiers":["ICD10CM:D33.4","icd11.foundation:1588169218","NCIT:C3627","MEDGEN:56329","ICD9:225.3","SCTID:92405007","UMLS:C0154034"],"synonyms":[{"name":"benign neoplasm of the spinal cord","type":"exact"},{"name":"benign spinal cord neoplasm","type":"exact"},{"name":"benign spinal cord tumor","type":"exact"},{"name":"benign spinal cord tumour","type":"exact"},{"name":"benign tumor of spinal cord","type":"exact"},{"name":"benign tumor of the spinal cord","type":"exact"},{"name":"benign tumour of spinal cord","type":"exact"},{"name":"benign tumour of the spinal cord","type":"exact"},{"name":"spinal cord benign neoplasm","type":"exact"},{"name":"spinal cord neoplasm, benign","type":"exact"}],"termid":"MONDO:0021506","xrefs":{"Monarch":{"xref_id":"0021506"}}}


id: PBO:0063987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 21","termid":"PBO:0063987"}


id: SO:0001294
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N4_N4_2_prime_O_trimethylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N4_N4_2_prime_O_trimethylcytidine","secondary_identifiers":["RNAMOD:107"],"synonyms":[{"name":"N4,N4,2'-O-trimethylcytidine","type":"exact"},{"name":"m42Cm","type":"exact"}],"termid":"SO:0001294"}


id: GO:0070112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround an organellar chromatophore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"organellar chromatophore","termid":"GO:0070111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"organellar chromatophore membrane","synonyms":[{"name":"Paulinella-type chromatophore membrane","type":"exact"}],"termid":"GO:0070112"}


id: MONDO:0006139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaplastic changes in the cervical glandular or squamous epithelium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"},{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical metaplasia","secondary_identifiers":["EFO:1000168","MEDGEN:129096","UMLS:C0281796"],"termid":"MONDO:0006139","xrefs":{"Monarch":{"xref_id":"0006139"}}}


id: GO:0033428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"CAG codon-amino acid adaptor activity","synonyms":[{"name":"glutamine tRNA","type":"related"}],"termid":"GO:0033428"}


id: PBO:0090556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly chaperone for ribosomal protein Rpl4, TPR repeat protein Acl4","termid":"PBO:0090556"}


id: SO:1000071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant_effect where the way in which the primary transcriptional product is processed to form the mature transcript, specifically by the removal (splicing) of intron sequences is changed.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000071 sequence_variant_affecting_splicing (obsolete SO:1000071)","synonyms":[{"name":"mutation affecting splicing","type":"related"},{"name":"sequence variant affecting splicing","type":"exact"}],"termid":"SO:1000071"}


id: PR:O94669
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apm3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 complex subunit mu (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.11c","synonyms":[{"name":"Spom972h-apm3","type":"exact"},{"name":"adaptor-related protein complex 3 subunit mu (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94669"}


id: PBO:0056397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein RP/EB family member 2","termid":"PBO:0056397"}


id: GO:0035671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an enone + NADPH + H+ = a ketone + NADP+.","definition_xrefs":["GOC:kad","PMID:19166903","PMID:17945329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"enone reductase activity","secondary_identifiers":["MetaCyc:RXN-12267"],"termid":"GO:0035671"}


id: PBO:0039388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylase alpha 2B","termid":"PBO:0039388"}


id: PBO:0072907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory carrier membrane protein 5","termid":"PBO:0072907"}


id: PBO:0077506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 223","termid":"PBO:0077506"}


id: PBO:0090279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B alpha subunit Gcn3","termid":"PBO:0090279"}


id: PBO:0065452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase, 6 pseudogene 3","termid":"PBO:0065452"}


id: MONDO:0022798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cohen Lockood Wyborney syndrome","termid":"MONDO:0022798","xrefs":{"Monarch":{"xref_id":"0022798"}}}


id: PBO:0064594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 1 homeobox 1","termid":"PBO:0064594"}


id: GO:0000736
data:
  {"annotated_genes":["SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75315],"is_not":false,"summary":null,"term":"GO:0000736"}]},"cv_name":"biological_process","definition":"During DSBR via single-strand annealing, the removal of nonhomologous sequences at the broken 3' single-strand DNA end before DNA repair synthesis can occur.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"removal of nonhomologous ends","termid":"GO:0000735"},{"relation_name":"part_of","term_name":"double-strand break repair via single-strand annealing","termid":"GO:0045002"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"double-strand break repair via single-strand annealing, removal of nonhomologous ends","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000736","terms_by_termid":{"GO:0000736":null}}


id: PBO:0014611
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SSD1","termid":"PBO:0014611"}


id: MONDO:1011275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glaucoma that occurs in cats due to a mutation in the LTBP2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"glaucoma, domestic cat","termid":"MONDO:1011511"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, LTBP2-related, domestic cat","secondary_identifiers":["OMIA:002017-9685"],"synonyms":[{"name":"glaucoma 3, primary congenital, domestic cat","type":"related"}],"termid":"MONDO:1011275","xrefs":{"Monarch":{"xref_id":"1011275"}}}


id: PBO:0070123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 37 pseudogene","termid":"PBO:0070123"}


id: GO:0102093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acryloyl-CoA + H2O = acrylate + coenzyme A + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete acrylate:acyl-coA CoA transferase activity (obsolete GO:0102093)","termid":"GO:0102093"}


id: MONDO:0013989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the KCNT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 14","secondary_identifiers":["MEDGEN:767109","UMLS:C3554195","GARD:15886","DOID:0080439","OMIM:614959"],"synonyms":[{"name":"DEE14","type":"exact"},{"name":"EIEE14","type":"exact"},{"name":"KCNT1 early infantile epileptic encephalopathy","type":"exact"},{"name":"KCNT1-related epilepsy","type":"broad"},{"name":"developmental and epileptic encephalopathy 14","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in KCNT1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 14","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 14","type":"exact"}],"termid":"MONDO:0013989","xrefs":{"Monarch":{"xref_id":"0013989"}}}


id: PBO:0057214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378d-1","termid":"PBO:0057214"}


id: GO:0035286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Division of a leg into a series of semi-repetitive parts or segments. Most arthropod appendages are visibly segmented; the Drosophila leg for example has nine segments, each separated from the next by a flexible joint.","definition_xrefs":["PMID:10357895"],"gene_count":0,"genotype_count":0,"name":"obsolete leg segmentation (obsolete GO:0035286)","synonyms":[{"name":"leg segmentation","type":"exact"}],"termid":"GO:0035286"}


id: PBO:0000566
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperammonemia","termid":"PBO:0000566"}


id: GO:0005782
data:
  {"annotated_genes":["SJAG_04823","SJAG_02496","SJAG_00706","SJAG_00326","SJAG_00947","SJAG_00702","SJAG_02630"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71075,105625,112138,112155,115050,116061,118590],"is_not":false,"summary":null,"term":"GO:0005782"}]},"cv_name":"cellular_component","definition":"The volume contained within the membranes of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase.","definition_xrefs":["GOC:curators","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody lumen","termid":"GO:0031907"},{"relation_name":"part_of","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00706":null,"SJAG_00947":null,"SJAG_02496":null,"SJAG_02630":null,"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005777"],"is_obsolete":false,"name":"peroxisomal matrix","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0031909"],"synonyms":[{"name":"peroxisomal lumen","type":"exact"}],"termid":"GO:0005782","terms_by_termid":{"GO:0005782":null}}


id: PBO:0075907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8SIA6 antisense RNA 1","termid":"PBO:0075907"}


id: RO:0002326
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_part_of","termid":"RO:0002216"},{"relation_name":"is_a","term_name":"part_of_structure_that_is_capable_of","termid":"RO:0002329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to","termid":"RO:0002326"}


id: GO:1905060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any calcium:cation antiporter activity that is involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["GOC:TermGenie","GO_REF:0000061","PMID:18024055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium:monoatomic cation antiporter activity","termid":"GO:0015368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"calcium:monoatomic cation antiporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"calcium:cation antiporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"broad"},{"name":"calcium:cation antiporter activity involved in regulation of postsynaptic cytosolic calcium ion levels","type":"exact"}],"termid":"GO:1905060"}


id: MOD:01128
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycolneuraminic acid","synonyms":[{"name":"NeuGc","type":"exact"}],"termid":"MOD:01128"}


id: PBO:0068159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 466","termid":"PBO:0068159"}


id: PBO:0084703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial GTPase, present in complex with Ugo1p and Fzo1p; required for mitochondrial morphology, fusion, and genome maintenance; promotes membrane bending; plays a direct role in formation and maintenance of lamellar, but not of tubular, cristae; exists as long and short form with different distributions; ratio of long to short forms is regulated by Psd1p; homolog of human OPA1 involved in autosomal dominant optic atrophy","termid":"PBO:0084703"}


id: PBO:0035731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_secretion_during_vegetative_growth","termid":"PBO:0035731"}


id: MONDO:0011480
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86209],"is_not":false,"summary":null,"term":"MONDO:0011480"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the ACTG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 20","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:346852","UMLS:C1858172","DOID:0110550","GARD:18111","OMIM:604717","MESH:C565754"],"synonyms":[{"name":"ACTG1 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"DFNA20","type":"narrow"},{"name":"DFNA26","type":"narrow"},{"name":"autosomal dominant deafness 20","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 20","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in ACTG1","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 20","type":"narrow"},{"name":"deafness, autosomal dominant 20","type":"narrow"},{"name":"deafness, autosomal dominant 20/26","type":"narrow"},{"name":"deafness, autosomal dominant type 20","type":"narrow"}],"termid":"MONDO:0011480","terms_by_termid":{"MONDO:0011480":null},"xrefs":{"Monarch":{"xref_id":"0011480"}}}


id: PBO:0056509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallo-beta-lactamase domain containing 1","termid":"PBO:0056509"}


id: PBO:0058152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4447","termid":"PBO:0058152"}


id: GO:0009279
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid bilayer that forms the outermost membrane of the cell envelope; enriched in polysaccharide and protein; the outer leaflet of the membrane contains specific lipopolysaccharide structures.","definition_xrefs":["GOC:md","GOC:mtg_sensu","ISBN:0135712254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer membrane","termid":"GO:0019867"},{"relation_name":"part_of","term_name":"external encapsulating structure","termid":"GO:0030312"},{"relation_name":"part_of","term_name":"cell envelope","termid":"GO:0030313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell outer membrane","synonyms":[{"name":"outer membrane of cell","type":"exact"}],"termid":"GO:0009279"}


id: FYPO:0007490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a mannosyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal mannosyltransferase activity","termid":"FYPO:0007490"}


id: MONDO:0011441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complex regional pain syndrome type 1 (CRPS1) is a form of complex regional pain syndrome in which the pain is disproportionate to any known inciting event and is characterized by continuous pain, allodynia, or hyperalgesia as well as edema, coloration (changes in skin blood flow), or abnormal sudomotor activity in the region of pain. Onset of CRPS1 symptoms may occur within a few days to a month after an injury or trauma to the affected limb.","definition_xrefs":["Orphanet:99995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"complex regional pain syndrome","termid":"MONDO:0019369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex regional pain syndrome type 1","secondary_identifiers":["DOID:1811","EFO:1001147","MEDGEN:11159","SCTID:50642008","ICD9:733.7","MedDRA:10038249","GARD:16928","MESH:D012019","ICD9:337.29","UMLS:C0034931","ICD9:337.21","ICD10CM:M89.0","MedDRA:10064334","ICD9:337.20","NCIT:C85042","ICD9:337.2","OMIM:604335"],"synonyms":[{"name":"Algodystrophy","type":"exact"},{"name":"CRPS I","type":"exact"},{"name":"CRPS1","type":"exact"},{"name":"Complex regional pain syndrome I","type":"exact"},{"name":"RND","type":"exact"},{"name":"RSDS","type":"exact"},{"name":"complex regional pain syndrome type 1","type":"exact"},{"name":"reflex neurovascular dystrophy","type":"exact"},{"name":"reflex sympathetic dystrophy","type":"exact"},{"name":"reflex sympathetic dystrophy syndrome","type":"exact"}],"termid":"MONDO:0011441","xrefs":{"Monarch":{"xref_id":"0011441"}}}


id: PBO:0040507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AVL9 cell migration associated","termid":"PBO:0040507"}


id: GO:0015147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-arabinose from one side of a membrane to the other. Arabinose occurs free, for example in the heartwood of many conifers and in the combined states, in both furanose and pyranose forms, as a constituent of various plant hemicelluloses, bacterial polysaccharides, etc.","definition_xrefs":["ISBN:0198506732","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose transmembrane transporter activity","termid":"GO:0042900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-arabinose transmembrane transporter activity","synonyms":[{"name":"L-arabinose/beta-D-thiogalactopyranoside:hydrogen antiporter activity","type":"narrow"}],"termid":"GO:0015147"}


id: MONDO:0003091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucoepidermoid carcinoma that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin carcinoma","termid":"MONDO:0002656"},{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"cutaneous mucoepidermoid carcinoma","secondary_identifiers":["MEDGEN:91072","SCTID:254713002","NCIT:C4472","UMLS:C0346019","DOID:4683"],"synonyms":[{"name":"mucoepidermoid skin carcinoma","type":"exact"},{"name":"zone of skin mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0003091","xrefs":{"Monarch":{"xref_id":"0003091"}}}


id: PBO:0069141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 392, pseudogene","termid":"PBO:0069141"}


id: PBO:0039066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase","termid":"PBO:0039066"}


id: PBO:0061024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 7","termid":"PBO:0061024"}


id: PBO:0071119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 121","termid":"PBO:0071119"}


id: PBO:0012035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein involved in ER-nucleus signaling (predicted)","termid":"PBO:0012035"}


id: MOD:01787
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-tyrosine residues through their 5' positions by amine nitrogen to form 5'-(L-tyros-5'-yl)amino-L-tyrosine.","definition_xrefs":["PubMed:18781570","RESID:AA0459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-(L-tyros-5'-yl)amino-L-tyrosine","synonyms":[{"name":"(2S,2'S)-3,3'-[iminobis(4-hydroxybenzene-3,1-diyl)]bis(2-aminopropanoic acid)","type":"exact"},{"name":"5'-(L-tyros-5'-yl)amino-L-tyrosine","type":"exact"},{"name":"5'-[(tyros-5'-yl)amino]tyrosine","type":"exact"},{"name":"5'-tyrosyl-5'-aminotyrosine","type":"exact"},{"name":"CROSSLNK 5'-tyrosyl-5'-aminotyrosine (Tyr-Tyr) (interchain)","type":"exact"},{"name":"bis(LTQ) linkage","type":"exact"}],"termid":"MOD:01787"}


id: GO:0008816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S)-citryl-CoA = acetyl-CoA + oxaloacetate.","definition_xrefs":["EC:4.1.3.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"citryl-CoA lyase activity","secondary_identifiers":["RHEA:20812","MetaCyc:CITRYLY-RXN"],"synonyms":[{"name":"(3S)-citryl-CoA oxaloacetate-lyase (acetyl-CoA-forming)","type":"related"},{"name":"(3S)-citryl-CoA oxaloacetate-lyase activity","type":"related"}],"termid":"GO:0008816"}


id: MONDO:0027026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A verrucous carcinoma of the skin or mucosa that occurs in the anogenital region.","direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system cancer","termid":"MONDO:0002149"},{"relation_name":"is_a","term_name":"anogenital human papillomavirus infection","termid":"MONDO:0005647"},{"relation_name":"is_a","term_name":"verrucous carcinoma","termid":"MONDO:0006006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Buschke Lowenstein tumor","secondary_identifiers":["MEDGEN:473018","MESH:D062688","GARD:9663","SCTID:402910001","NCIT:C6371","UMLS:C0276264"],"synonyms":[{"name":"Buschke Lowenstein tumor","type":"exact"},{"name":"Buschke-Lowenstein tumor","type":"related"},{"name":"Buschke-Lowenstein tumour","type":"related"},{"name":"GCBL","type":"related"},{"name":"Giant condyloma Acuminatum","type":"related"},{"name":"Giant condyloma Acuminatums","type":"related"},{"name":"Giant condyloma of Buschke and Lowenstein","type":"related"},{"name":"Lowenstein tumor, Buschke","type":"related"},{"name":"anogenital type verrucous carcinoma","type":"related"},{"name":"condyloma Acuminatum, Giant","type":"related"},{"name":"condyloma Acuminatums, Giant","type":"related"},{"name":"giant condyloma acuminatum involving the prepuce and glans penis","type":"narrow"},{"name":"giant condyloma of Buschke and Lowenstein","type":"narrow"},{"name":"tumor, Buschke Lowenstein","type":"related"},{"name":"tumor, Buschke-Lowenstein","type":"related"}],"termid":"MONDO:0027026","xrefs":{"Monarch":{"xref_id":"0027026"}}}


id: PBO:0088698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family plus-end directed microtubule motor Tea2","termid":"PBO:0088698"}


id: PR:Q09688
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug121 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 121 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.06c","synonyms":[{"name":"Spom972h-mug121","type":"exact"}],"termid":"PR:Q09688"}


id: PBO:0087982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; catalyzes modification of wobble bases in tRNA anticodons to 2, 5-methoxycarbonylmethyluridine and 5-methoxycarbonylmethyl-2-thiouridine; may act as part of a complex with Trm112p; deletion mutation increases translational infidelity, including amino acid misincorporation and -1 frameshifting, and also confers resistance to zymocin; null mutant displays activation of stress responses","termid":"PBO:0087982"}


id: PBO:0004284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orc6","termid":"PBO:0004284"}


id: PR:Q92358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bqt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere bouquet protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.13c","synonyms":[{"name":"Spom972h-bqt1","type":"exact"},{"name":"meiotic chromosome segregation protein bqt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic recombination protein rec26 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 23 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92358"}


id: MONDO:0033619
data:
  {"annotated_genes":["SJAG_04821"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86073],"is_not":false,"summary":null,"term":"MONDO:0033619"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ALG14-congenital disorder of glycosylation","termid":"MONDO:0100559"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"myopathy, epilepsy, and progressive cerebral atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436652","MEDGEN:1759100","OMIM:619036"],"synonyms":[{"name":"MEPCA","type":"exact"}],"termid":"MONDO:0033619","terms_by_termid":{"MONDO:0033619":null},"xrefs":{"Monarch":{"xref_id":"0033619"}}}


id: PBO:0082209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,3-mannosyltransferase; integral membrane glycoprotein of the Golgi complex, required for addition of alpha1,3-mannose linkages to N-linked and O-linked oligosaccharides, one of five S. cerevisiae proteins of the MNN1 family","termid":"PBO:0082209"}


id: PBO:0070985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 9","termid":"PBO:0070985"}


id: FYPO:0007927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to dihydrocoumarin. Cells stop growing (and may die) at a concentration of dihydrocoumarin that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to dihydrocoumarin","synonyms":[{"name":"sensitive to dihydrocoumarin during vegetative growth","type":"exact"}],"termid":"FYPO:0007927"}


id: PBO:0054039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1375","termid":"PBO:0054039"}


id: PBO:0073100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 4","termid":"PBO:0073100"}


id: FYPO:0005586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylethanolamine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular phosphatidylethanolamine level","synonyms":[{"name":"increased cellular PE level","type":"exact"},{"name":"increased cellular phosphatidylethanolamine level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylethanolamine level during vegetative growth","type":"exact"},{"name":"increased phosphatidylethanolamine accumulation","type":"related"}],"termid":"FYPO:0005586"}


id: PBO:0063395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6IP pseudogene 2","termid":"PBO:0063395"}


id: FYPO:0004742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the outer repeat region of the centromere is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing at centromere","termid":"FYPO:0002360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin silencing at centromere outer repeat","synonyms":[{"name":"normal centromere outer repeat region chromatin silencing","type":"exact"},{"name":"normal chromatin silencing at centromere otr","type":"exact"},{"name":"normal chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"normal chromatin silencing at centromere outer repeat region during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"normal chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"normal chromatin silencing at pericentric region","type":"related"},{"name":"normal chromatin silencing at pericentromeric region","type":"related"},{"name":"normal heterochromatic silencing at centromere outer repeat region","type":"exact"},{"name":"normal heterochromatin silencing at centromere outer repeat region","type":"exact"}],"termid":"FYPO:0004742"}


id: PBO:0059873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 10","termid":"PBO:0059873"}


id: GO:1903697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microvillus assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22797597","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microvillus assembly","termid":"GO:0032534"},{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"negatively_regulates","term_name":"microvillus assembly","termid":"GO:0030033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of microvillus assembly","synonyms":[{"name":"down regulation of microvillus assembly","type":"exact"},{"name":"down regulation of microvillus biogenesis","type":"related"},{"name":"down-regulation of microvillus assembly","type":"exact"},{"name":"down-regulation of microvillus biogenesis","type":"related"},{"name":"downregulation of microvillus assembly","type":"exact"},{"name":"downregulation of microvillus biogenesis","type":"related"},{"name":"inhibition of microvillus assembly","type":"narrow"},{"name":"inhibition of microvillus biogenesis","type":"related"},{"name":"negative regulation of microvillus biogenesis","type":"related"}],"termid":"GO:1903697"}


id: GO:0019423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sulfur oxidation process that proceeds via the reaction catalyzed by sulfur:ferric ion oxidoreductase, and requires the presence of ferric ion (Fe3+).","definition_xrefs":["MetaCyc:FESULFOX-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxidation","termid":"GO:0019417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfur oxidation, ferric ion-dependent","synonyms":[{"name":"sulphur oxidation, ferric ion-dependent","type":"exact"}],"termid":"GO:0019423"}


id: GO:1905433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide.","definition_xrefs":["PMID:19448629","GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"regulation of retrograde trans-synaptic signaling by neuropeptide","termid":"GO:1905432"},{"relation_name":"negatively_regulates","term_name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of retrograde trans-synaptic signaling by neuropeptide","synonyms":[{"name":"down regulation of retrograde trans-synaptic signaling by neuropeptide","type":"exact"},{"name":"down-regulation of retrograde trans-synaptic signaling by neuropeptide","type":"exact"},{"name":"downregulation of retrograde trans-synaptic signaling by neuropeptide","type":"exact"},{"name":"inhibition of neuropeptide-mediated retrograde trans-synaptic signaling","type":"related"},{"name":"inhibition of retrograde trans-synaptic signaling by neuropeptide","type":"narrow"},{"name":"negative regulation of neuropeptide-mediated retrograde trans-synaptic signaling","type":"related"}],"termid":"GO:1905433"}


id: GO:0008526
data:
  {"annotated_genes":["SJAG_03172","SJAG_03746","SJAG_03741","SJAG_03721","SJAG_01225"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70407,73604,74886,76657,76940],"is_not":false,"summary":null,"term":"GO:0008526"}]},"cv_name":"molecular_function","definition":"Removes phosphatidylinositol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:20823909","PMID:24220498","GOC:krc","PMID:25797198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01225":null,"SJAG_03172":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0120013"],"is_obsolete":false,"name":"phosphatidylinositol transfer activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1483229","Reactome:R-HSA-8869241","GO:0120018","Reactome:R-HSA-8874470"],"synonyms":[{"name":"intermembrane phosphatidylinositol transfer activity","type":"narrow"},{"name":"intermembrane phosphotidylinositol transfer activity","type":"narrow"},{"name":"phosphatidylinositol carrier activity","type":"exact"},{"name":"phosphatidylinositol transporter activity","type":"broad"}],"termid":"GO:0008526","terms_by_termid":{"GO:0008526":null}}


id: GO:0075067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of symbiont, or the progression of the symbiont from an initial condition to a later condition, occurring in its host's intercellular space. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont in host intercellular space (obsolete GO:0075067)","synonyms":[{"name":"growth or development of symbiont in host intercellular space","type":"exact"}],"termid":"GO:0075067"}


id: GO:0072684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Endonucleolytic cleavage of the 3'-end of the pre-tRNA as part of the process of generating the mature 3'-end of the tRNA in the mitochondrion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial tRNA 3'-trailer cleavage, endonucleolytic (obsolete GO:0072684)","synonyms":[{"name":"mitochondrial endonucleolytic tRNA 3'-end cleavage","type":"exact"},{"name":"mitochondrial endonucleolytic tRNA 3'-trailer cleavage","type":"related"},{"name":"mitochondrial tRNA 3'-end cleavage, endonucleolytic","type":"exact"}],"termid":"GO:0072684"}


id: PBO:0088169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Widely-conserved NADHX dehydratase; converts (S)-NADHX to NADH in ATP-dependent manner; YKL151C promoter contains STREs (stress response elements) and expression is induced by heat shock or methyl methanesulfonate; downstream intergenic region drives antisense expression and mediates coordinated regulation of YKL151C and GPM1 phosphoglycerate mutase; protein abundance increases in response to DNA replication stress; homolog of Carkd in mammals and C-terminus of YjeF in E.coli","termid":"PBO:0088169"}


id: PBO:0058792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7161","termid":"PBO:0058792"}


id: PATO:0001114
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001114 relative energy value (obsolete PATO:0001114)","termid":"PATO:0001114"}


id: PBO:0056498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 2B","termid":"PBO:0056498"}


id: GO:0023047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a chemical signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by chemical mediator (obsolete GO:0023047)","synonyms":[{"name":"signal initiation by chemical mediator","type":"exact"}],"termid":"GO:0023047"}


id: MONDO:0030035
data:
  {"annotated_genes":["SJAG_00690","SJAG_01942"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85759,85760],"is_not":false,"summary":null,"term":"MONDO:0030035"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00690":null,"SJAG_01942":null},"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy, developmental delay, and episodic neurologic regression syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618877","MEDGEN:1719567","UMLS:C5394367"],"synonyms":[{"name":"LEUDEN","type":"exact"},{"name":"LEUKOENCEPHALOPATHY, DEVELOPMENTAL DELAY, AND EPISODIC NEUROLOGIC REGRESSION SYNDROME","type":"exact"},{"name":"Leuden Syndrome","type":"exact"},{"name":"leukoencephalopathy, developmental delay, and episodic neurologic regression syndrome","type":"exact"}],"termid":"MONDO:0030035","terms_by_termid":{"MONDO:0030035":null},"xrefs":{"Monarch":{"xref_id":"0030035"}}}


id: PBO:0048884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 3, pseudogene","termid":"PBO:0048884"}


id: PBO:0074268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 5","termid":"PBO:0074268"}


id: FYPO:0007639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA damage measured at ribosomal DNA in a cell is greater than normal during G0 phase. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PomBase:mah","PMID:27738016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage","termid":"FYPO:0003546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased DNA damage at rDNA during G0","synonyms":[{"name":"increased DNA damage at rDNA during cell quiescence","type":"exact"},{"name":"increased DNA damage at rDNA during quiescence","type":"exact"},{"name":"increased DNA damage at ribosomal DNA","type":"exact"}],"termid":"FYPO:0007639"}


id: PBO:0030852
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity","termid":"PBO:0030852"}


id: PR:Q9UTM0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iec1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTM0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.02","synonyms":[{"name":"Spom972h-iec1","type":"exact"}],"termid":"PR:Q9UTM0"}


id: MONDO:0023575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharophimosis","termid":"MONDO:0001008"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Krauss Herman Holmes syndrome","secondary_identifiers":["MEDGEN:419832","UMLS:C2931549","MESH:C537618"],"synonyms":[{"name":"telecanthus, hypertelorism, strabismus, and pes cavus syndrome","type":"related"}],"termid":"MONDO:0023575","xrefs":{"Monarch":{"xref_id":"0023575"}}}


id: PBO:0045271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 18","termid":"PBO:0045271"}


id: PBO:0047763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fos proto-oncogene, AP-1 transcription factor subunit","termid":"PBO:0047763"}


id: PBO:0070082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 39, pseudogene","termid":"PBO:0070082"}


id: PBO:0061942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily Q member 1B pseudogene","termid":"PBO:0061942"}


id: GO:0050949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of late stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of melanocyte differentiation","termid":"GO:0045635"},{"relation_name":"is_a","term_name":"regulation of late stripe melanocyte differentiation","termid":"GO:0050940"},{"relation_name":"negatively_regulates","term_name":"late stripe melanocyte differentiation","termid":"GO:0050934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of late stripe melanocyte differentiation","synonyms":[{"name":"down regulation of late stripe melanocyte differentiation","type":"exact"},{"name":"down-regulation of late stripe melanocyte differentiation","type":"exact"},{"name":"downregulation of late stripe melanocyte differentiation","type":"exact"},{"name":"inhibition of late stripe melanocyte differentiation","type":"narrow"},{"name":"negative regulation of late stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050949"}


id: GO:1900813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving monodictyphenone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"monodictyphenone metabolic process","synonyms":[{"name":"monodictyphenone metabolism","type":"exact"}],"termid":"GO:1900813"}


id: MONDO:0008151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gnathodiaphyseal dysplasia (GDD) is a bone dysplasia characterized by bone fragility, frequent bone fractures at a young age, cemento-osseous lesions of the jaw bones, bowing of tubular bones (tibia and fibula) and diaphyseal sclerosis of long bones associated with generalized osteopenia. GD follows an autosomal dominant mode of transmission.","definition_xrefs":["Orphanet:53697"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"gnathodiaphyseal dysplasia","secondary_identifiers":["GARD:8698","MESH:C536039","MEDGEN:331575","DOID:0111533","icd11.foundation:1984860886","SCTID:715568002","UMLS:C1833736","OMIM:166260"],"synonyms":[{"name":"GDD","type":"exact"},{"name":"GNATHODIAPHYSEAL dysplasia","type":"related"},{"name":"Gnathodiaphyseal sclerosis","type":"related"},{"name":"Levin syndrome 2","type":"related"},{"name":"gnathodiaphyseal dysplasia","type":"exact"},{"name":"osteogenesis imperfecta Levin type","type":"related"},{"name":"osteogenesis imperfecta with unusual skeletal lesions","type":"related"}],"termid":"MONDO:0008151","xrefs":{"Monarch":{"xref_id":"0008151"}}}


id: PBO:0062271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 2","termid":"PBO:0062271"}


id: GO:0120147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A [sulfatase]-L-cysteine + O2 + 2 a thiol = a [sulfatase]-3-oxo-L-alanine + hydrogen sulfide + a disulfide + H2O.","definition_xrefs":["RHEA:51152","EC:1.8.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"formylglycine-generating oxidase activity","secondary_identifiers":["MetaCyc:RXN-16226"],"termid":"GO:0120147"}


id: GO:0060480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lung goblet cell. A goblet cell is a cell of the epithelial lining that produces and secretes mucins.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung secretory cell differentiation","termid":"GO:0061140"},{"relation_name":"part_of","term_name":"lobar bronchus epithelium development","termid":"GO:0060481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung goblet cell differentiation","synonyms":[{"name":"pulmonary goblet cell differentiation","type":"exact"}],"termid":"GO:0060480"}


id: MONDO:0043555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diarrhea occurring in infants from newborn to 24-months old.","definition_xrefs":["MESH:D003968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysentery","termid":"MONDO:0001517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"infantile diarrhea","secondary_identifiers":["UMLS:C0011992","SCTID:39963006","MEDGEN:8361"],"synonyms":[{"name":"Diarrheas, infantile","type":"related"},{"name":"diarrheal disease of infancy","type":"exact"},{"name":"infantile Diarrheas","type":"related"},{"name":"infantile diarrhea","type":"exact"},{"name":"infantile diarrheal disease","type":"exact"},{"name":"infantile onset diarrheal disease","type":"exact"},{"name":"toddler diarrhea","type":"exact"},{"name":"toddler diarrhoea","type":"exact"}],"termid":"MONDO:0043555","xrefs":{"Monarch":{"xref_id":"0043555"}}}


id: MONDO:0002816
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"}]},"cv_name":"mondo","definition":"A disease involving the adrenal cortex.","direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"is_obsolete":false,"name":"adrenal cortex disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0001614","MEDGEN:154","SCTID:129636003","MESH:D000303","DOID:3952"],"synonyms":[{"name":"adrenal cortex disease","type":"exact"},{"name":"adrenal cortex disease or disorder","type":"exact"},{"name":"disease of adrenal cortex","type":"exact"},{"name":"disease or disorder of adrenal cortex","type":"exact"},{"name":"disorder of adrenal cortex","type":"exact"}],"termid":"MONDO:0002816","terms_by_termid":{"MONDO:0013310":null},"xrefs":{"Monarch":{"xref_id":"0002816"}}}


id: GO:0051132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature natural killer T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["PMID:12154375","ISBN:0781735149","PMID:9133426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell activation","synonyms":[{"name":"NK T lymphocyte activation","type":"exact"},{"name":"NK T-cell activation","type":"exact"},{"name":"NK T-lymphocyte activation","type":"exact"},{"name":"NKT cell activation","type":"exact"},{"name":"NT cell activation","type":"exact"},{"name":"natural T cell activation","type":"exact"},{"name":"natural killer T cell activation","type":"exact"}],"termid":"GO:0051132"}


id: MONDO:0012782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 13","secondary_identifiers":["MEDGEN:383149","OMIM:612011","UMLS:C2677601"],"synonyms":[{"name":"CELIAC13","type":"exact"},{"name":"celiac disease, susceptibility to, 13","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 13","type":"related"}],"termid":"MONDO:0012782","xrefs":{"Monarch":{"xref_id":"0012782"}}}


id: MONDO:0015099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"unilateral polymicrogyria","termid":"MONDO:0017092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"unilateral hemispheric polymicrogyria","secondary_identifiers":["icd11.foundation:1318599015","UMLS:C5681804","Orphanet:101071","GARD:19777","MEDGEN:1842283"],"termid":"MONDO:0015099","xrefs":{"Monarch":{"xref_id":"0015099"}}}


id: PBO:0044085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A5","termid":"PBO:0044085"}


id: PBO:0071612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 30","termid":"PBO:0071612"}


id: PBO:0052581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore scaffold 1","termid":"PBO:0052581"}


id: GO:0090110
data:
  {"annotated_genes":["SJAG_03558","SJAG_05344","SJAG_03153","SJAG_05345","SJAG_02349","SJAG_02539","SJAG_00072"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71720,75163,75394,76023,76847,77436,78782],"is_not":false,"summary":null,"term":"GO:0090110"}]},"cv_name":"biological_process","definition":"The formation of a macromolecular complex between the COPII coat proteins and proteins and/or lipoproteins that are going to be transported by the COPII vesicle to the Golgi.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:lb","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle cargo loading","termid":"GO:0035459"},{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"part_of","term_name":"COPII-coated vesicle budding","termid":"GO:0090114"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0051179","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"COPII-coated vesicle cargo loading","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"COPII coat-cargo complex assembly","type":"related"},{"name":"cargo loading into COPII vesicle","type":"exact"},{"name":"cargo loading into COPII-coated vesicle","type":"exact"},{"name":"cargo selection into COPII-coated vesicle","type":"exact"}],"termid":"GO:0090110","terms_by_termid":{"GO:0090110":null}}


id: PBO:0001787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase phosphoprotein 6 family protein","termid":"PBO:0001787"}


id: FYPO:0003661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via nonhomologous end joining (NHEJ) is abnormal. NHEJ is the repair of double-strand breaks in DNA in which the two broken ends are rejoined with little or no sequence complementarity.","definition_xrefs":["PomBase:mah","GO:0006303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0000298","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal double-strand break repair via nonhomologous end joining","synonyms":[{"name":"abnormal NHEJ","type":"exact"},{"name":"abnormal double-strand break repair via nonhomologous end joining during mitotic cell cycle","type":"related"},{"name":"abnormal double-strand break repair via nonhomologous end joining during vegetative growth","type":"exact"},{"name":"abnormal nonhomologous end joining","type":"exact"}],"termid":"FYPO:0003661"}


id: PBO:0054626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2031","termid":"PBO:0054626"}


id: GO:0033005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of mast cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of mast cell activation","termid":"GO:0033003"},{"relation_name":"positively_regulates","term_name":"mast cell activation","termid":"GO:0045576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell activation","termid":"GO:0033005"}


id: PBO:0004144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Hsp16","termid":"PBO:0004144"}


id: PBO:0028796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_rDNA_replication_fork_barrier","termid":"PBO:0028796"}


id: MOD:00877
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"dimethyl pimelimidate modification from Unimod","definition_xrefs":["URL:http://www.piercenet.com/files/0668ss5.pdf","Unimod:455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidoester crosslink dimethyl pimelimidate singly attached","synonyms":[{"name":"One end of crosslink attached, one end free","type":"related"},{"name":"Xlink:DMP-s","type":"related"}],"termid":"MOD:00877"}


id: MOD:01341
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["Unimod:90#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESP-Tag light d0","termid":"MOD:00468"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESP-Tag light d0 - site K","synonyms":[{"name":"ESP","type":"related"},{"name":"ESP-Tag light d0","type":"related"}],"termid":"MOD:01341"}


id: MONDO:0019911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal uniparental disomy of chromosome 4 is an uniparental disomy of maternal origin that most likely does not have any phenotypic expression except from cases of homozygosity for a recessive disease mutation for which only mother is a carrier.","definition_xrefs":["Orphanet:96180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 4 disorder","termid":"MONDO:0700011"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 4","secondary_identifiers":["SCTID:766238001","MEDGEN:1644554","GARD:19332","icd11.foundation:358848660","UMLS:C4707719"],"synonyms":[{"name":"UPD(4)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 4","type":"exact"}],"termid":"MONDO:0019911","xrefs":{"Monarch":{"xref_id":"0019911"}}}


id: FYPO:0007474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in a population do not divide at a uniform size, although each cell divides to form equal-size daughter cells. Within one population, some cells may be larger and others smaller than normal (i.e. compared to wild-type cells under the same conditions).","definition_xrefs":["PomBase:vw","PMID:23333317","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"variable cell size at division","synonyms":[{"name":"increased variability of cell size in a vegetative population","type":"exact"},{"name":"variable cell size at division during mitotic cell cycle","type":"related"},{"name":"variable cell size at division during vegetative growth","type":"exact"},{"name":"variable cell size at division, with equal-sized daughter cell formation","type":"exact"},{"name":"variable vegetative cell size at division","type":"exact"}],"termid":"FYPO:0007474"}


id: PBO:0090819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical variant C2 domain protein, human FAM102A and FAM102B ortholog, implicated in signalling or endocytosis","termid":"PBO:0090819"}


id: GO:0001950
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The fraction of cells, prepared by disruptive biochemical methods, that is enriched for plasma membranes.","definition_xrefs":["GOC:mgi_curators","PMID:15601832","PMID:11562363"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane enriched fraction (obsolete GO:0001950)","synonyms":[{"name":"PME fraction","type":"related"},{"name":"plasma membrane enriched fraction","type":"exact"}],"termid":"GO:0001950"}


id: PBO:0001676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine racemase (predicted)","termid":"PBO:0001676"}


id: PBO:0029198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation","termid":"PBO:0029198"}


id: GO:0004112
data:
  {"annotated_genes":["SJAG_00956","SJAG_01428","SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90986,101374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004113"},{"annotations":[79287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004115"},{"annotations":[79289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047555"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleoside cyclic phosphate + H2O = a nucleoside phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00956":null,"SJAG_01428":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyclic-nucleotide phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0004112","terms_by_termid":{"GO:0004113":null,"GO:0004115":null,"GO:0047555":null}}


id: PBO:0026946
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sunitinib","termid":"PBO:0026946"}


id: PBO:0078953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 4-1","termid":"PBO:0078953"}


id: PBO:0042224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin T2","termid":"PBO:0042224"}


id: FYPO:0002565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone methylation does not occur. All histone methylation may be affected, or methylation of specific sites on specific histones may be abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"},{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished histone methylation during vegetative growth","synonyms":[{"name":"abolished histone methylation during mitotic cell cycle","type":"related"},{"name":"histone methylation abolished during vegetative growth","type":"exact"},{"name":"histone methylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002565"}


id: GO:0098562
data:
  {"annotated_genes":["SJAG_00605","SJAG_01134","SJAG_04077","SJAG_04666","SJAG_05207","SJAG_02196","SJAG_01307","SJAG_02233","SJAG_02444","SJAG_03056","SJAG_03464","SJAG_01738","SJAG_04821","SJAG_04018","SJAG_03345","SJAG_04583","SJAG_04026","SJAG_00948","SJAG_03081","SJAG_04509","SJAG_03596","SJAG_02605","SJAG_05268","SJAG_03311","SJAG_00368","SJAG_04732","SJAG_00747","SJAG_01312","SJAG_02587","SJAG_01774","SJAG_02989","SJAG_01242","SJAG_02102"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76411,102613,117036,95415,98662,94238,106158,99001,110152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098554"},{"annotations":[90916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010009"},{"annotations":[99579,105130,106900,104778,89594,106121,100845,102818,116070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032473"},{"annotations":[90068,88224,99299,78595,80108,71114,111172,92751,76640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009898"},{"annotations":[106902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[110846],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[74636,80723,106810,75658],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"The side of a membrane that faces the cytoplasm.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_00605":null,"SJAG_00747":null,"SJAG_00948":null,"SJAG_01134":null,"SJAG_01242":null,"SJAG_01307":null,"SJAG_01312":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_02102":null,"SJAG_02196":null,"SJAG_02233":null,"SJAG_02444":null,"SJAG_02587":null,"SJAG_02605":null,"SJAG_02989":null,"SJAG_03056":null,"SJAG_03081":null,"SJAG_03311":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_03596":null,"SJAG_04018":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04509":null,"SJAG_04583":null,"SJAG_04666":null,"SJAG_04732":null,"SJAG_04821":null,"SJAG_05207":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098562","terms_by_termid":{"GO:0005834":null,"GO:0009898":null,"GO:0010009":null,"GO:0031234":null,"GO:0032473":null,"GO:0098554":null,"GO:0106186":null}}


id: GO:0061433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of caloric restriction, insufficient food energy intake.","definition_xrefs":["PMID:17914901","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"response to caloric restriction","termid":"GO:0061771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to caloric restriction","termid":"GO:0061433"}


id: GO:0022853
data:
  {"annotated_genes":["SJAG_01435","SJAG_00212","SJAG_MIT20","SJAG_01355","SJAG_01490","SJAG_MIT04","SJAG_07006","SJAG_01913","SJAG_01817","SJAG_02504","SJAG_03850","SJAG_02782","SJAG_01471","SJAG_01397","SJAG_01129","SJAG_MIT03","SJAG_01400","SJAG_04152","SJAG_07007","SJAG_03490","SJAG_00136","SJAG_03406","SJAG_02023","SJAG_04015","SJAG_00755","SJAG_03866","SJAG_02646","SJAG_04258","SJAG_05629","SJAG_04955","SJAG_01669","SJAG_04757","SJAG_01447","SJAG_00516","SJAG_00976","SJAG_00601","SJAG_05294","SJAG_04167","SJAG_03337","SJAG_01190","SJAG_01077","SJAG_MIT13","SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[71429,75551,80330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019829"},{"annotations":[89566,115762,117120,119354,114533,119332,119383,88541,92293,108595,74268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004129"},{"annotations":[113163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"},{"annotations":[71841,80609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[78182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[108166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"},{"annotations":[112658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[73575,78242,71149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008553"},{"annotations":[73789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[65004,58412,62785,71567,78863,61289,60648,61612,62010,65640,78801,60757,68080,79960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"},{"annotations":[117989,118468,119358,64168,113710,108272,104393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Enables the transfer of an ion from one side of a membrane to the other up the solute's concentration gradient. This is carried out by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transporter activity","termid":"GO:0015075"},{"relation_name":"is_a","term_name":"primary active transmembrane transporter activity","termid":"GO:0015399"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01129":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01490":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02399":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_02782":null,"SJAG_03337":null,"SJAG_03406":null,"SJAG_03490":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_04015":null,"SJAG_04152":null,"SJAG_04167":null,"SJAG_04258":null,"SJAG_04757":null,"SJAG_04955":null,"SJAG_05294":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"active monoatomic ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"active ion transmembrane transporter activity","type":"broad"}],"termid":"GO:0022853","terms_by_termid":{"GO:0004129":null,"GO:0005388":null,"GO:0008121":null,"GO:0008137":null,"GO:0008553":null,"GO:0008554":null,"GO:0008900":null,"GO:0015410":null,"GO:0019829":null,"GO:0043682":null,"GO:0046961":null,"GO:0140581":null}}


id: MONDO:0014099
data:
  {"annotated_genes":["SJAG_03361"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85367],"is_not":false,"summary":null,"term":"MONDO:0014099"}]},"cv_name":"mondo","definition":"Any nephrotic syndrome in which the cause of the disease is a mutation in the ARHGDIA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03361":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:815283","UMLS:C3808953","OMIM:615244","DOID:0080389","GARD:15925"],"synonyms":[{"name":"ARHGDIA nephrotic syndrome","type":"exact"},{"name":"NPHS8","type":"related"},{"name":"nephrotic syndrome caused by mutation in ARHGDIA","type":"exact"},{"name":"nephrotic syndrome, type 8","type":"exact"}],"termid":"MONDO:0014099","terms_by_termid":{"MONDO:0014099":null},"xrefs":{"Monarch":{"xref_id":"0014099"}}}


id: GO:0015247
data:
  {"annotated_genes":["SJAG_05209","SJAG_01945"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99804,112807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"}]},"cv_name":"molecular_function","definition":"Enables the transfer of aminophospholipids from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP. Aminophospholipids contain phosphoric acid as a mono- or diester and an amino (NH2) group.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"flippase activity","termid":"GO:0140327"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01945":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"aminophospholipid flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aminophospholipid transmembrane transporter activity","type":"related"},{"name":"aminophospholipid transporter activity","type":"related"}],"termid":"GO:0015247","terms_by_termid":{"GO:0140346":null}}


id: PBO:0011433
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. japonicus SJAG_03327","termid":"PBO:0011433"}


id: MONDO:0000433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete marginal zone B-cell lymphoma (obsolete MONDO:0000433)","termid":"MONDO:0000433","xrefs":{"Monarch":{"xref_id":"0000433"}}}


id: PBO:0036308
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3kb of 36 AA repeat","termid":"PBO:0036308"}


id: PBO:0085396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane permease; mediates uptake of glycerophosphoinositol and glycerophosphocholine as sources of the nutrients inositol and phosphate; expression and transport rate are regulated by phosphate and inositol availability","termid":"PBO:0085396"}


id: PBO:0069907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1198, pseudogene","termid":"PBO:0069907"}


id: PBO:0056381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 11","termid":"PBO:0056381"}


id: GO:1902557
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101678],"is_not":false,"summary":null,"term":"GO:1902557"}]},"cv_name":"molecular_function","definition":"Enables the transfer of 5'-adenylyl sulfate from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","PMID:24296033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transmembrane transporter activity","termid":"GO:0000295"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"5'-adenylyl sulfate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902557","terms_by_termid":{"GO:1902557":null}}


id: PBO:0113537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein of unknown function; targeted to vacuole via AP-3 pathway; member of multidrug resistance family; not an essential gene","termid":"PBO:0113537"}


id: PBO:0116848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane beta-glucan biosynthesis protein Max1","termid":"PBO:0116848"}


id: PATO:0001916
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and upper surface of an organism relative to another entity.","definition_xrefs":["PATOC:wd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior to","termid":"PATO:0001633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterodorsal to","termid":"PATO:0001916"}


id: GO:0047140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidized glutathione + CoA = reduced glutathione + CoA-glutathione.","definition_xrefs":["EC:1.8.4.3","MetaCyc:1.8.4.3-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glutathione-CoA-glutathione transhydrogenase activity","secondary_identifiers":["RHEA:13125"],"synonyms":[{"name":"CoA:glutathione-disulfide oxidoreductase activity","type":"related"},{"name":"coenzyme A:glutathione-disulfide oxidoreductase activity","type":"related"},{"name":"coenzyme A:oxidized-glutathione oxidoreductase activity","type":"related"},{"name":"glutathione coenzyme A-glutathione transhydrogenase activity","type":"related"},{"name":"glutathione-coenzyme A glutathione disulfide transhydrogenase activity","type":"related"},{"name":"glutathione:coenzyme A-glutathione transhydrogenase activity","type":"related"}],"termid":"GO:0047140"}


id: GO:0160175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which a somatic muscle attaches to the chitin-based cuticle. In insects, this may occur via a specialized epithelial cell adherence to the chitinous extracellular matrix and to muscle cells through their basement membrane.","definition_xrefs":["PMID:35675426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic muscle development","termid":"GO:0007525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic muscle attachment to chitin-based cuticle","termid":"GO:0160175"}


id: MONDO:0016489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Delta-beta-thalassemia is a form of beta-thalassemia characterized by decreased or absent synthesis of the delta- and beta-globin chains with a compensatory increase in expression of fetal gamma-chain synthesis.","definition_xrefs":["Orphanet:231237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-thalassemia and related diseases","termid":"MONDO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"delta-beta-thalassemia","secondary_identifiers":["MEDGEN:78790","MedDRA:10012236","ICD9:282.49","SCTID:16360009","UMLS:C0271985","MESH:C562716","ICD10CM:D56.2","GARD:17165","NCIT:C172823","DOID:0080773"],"termid":"MONDO:0016489","xrefs":{"Monarch":{"xref_id":"0016489"}}}


id: PBO:0061161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoyltransferase 1","termid":"PBO:0061161"}


id: GO:1904129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in somitogenesis.","definition_xrefs":["GOC:dph","GO_REF:0000058","GOC:TermGenie","PMID:24892953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in axis elongation","termid":"GO:1901234"},{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in somitogenesis","termid":"GO:1904127"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in somitogenesis","termid":"GO:0090246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in somitogenesis","synonyms":[{"name":"activation of convergent extension involved in somitogenesis","type":"narrow"},{"name":"up regulation of convergent extension involved in somitogenesis","type":"exact"},{"name":"up-regulation of convergent extension involved in somitogenesis","type":"exact"},{"name":"upregulation of convergent extension involved in somitogenesis","type":"exact"}],"termid":"GO:1904129"}


id: GO:1901159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xylulose 5-phosphate.","definition_xrefs":["GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylulose 5-phosphate metabolic process","termid":"GO:0051167"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylulose 5-phosphate biosynthetic process","synonyms":[{"name":"xylulose 5-phosphate anabolism","type":"exact"},{"name":"xylulose 5-phosphate biosynthesis","type":"exact"},{"name":"xylulose 5-phosphate formation","type":"exact"},{"name":"xylulose 5-phosphate synthesis","type":"exact"}],"termid":"GO:1901159"}


id: PBO:0047474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 1","termid":"PBO:0047474"}


id: GO:0016862
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050163"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor, which is a keto- or an enol-group, are the same molecule, and no oxidized product appears.","definition_xrefs":["EC:5.3.2.-","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, interconverting keto- and enol-groups","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intramolecular isomerase activity, interconverting keto- and enol-groups","type":"exact"}],"termid":"GO:0016862","terms_by_termid":{"GO:0050163":null}}


id: PBO:0072497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 26","termid":"PBO:0072497"}


id: GO:0099001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont's genome into the host cell through the host cell envelope via a long, flexible tail ejection system consisting a baseplate, a central tube and a terminator complex which attaches the tail to the phage capsid. Upon binding to the host cell surface, the baseplate changes its conformation and triggers genome ejection into the host cell cytoplasm. Occurs in non-enveloped prokaryotic viruses.","definition_xrefs":["VZ:3952","PMID:22297512","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont genome ejection through host cell envelope","termid":"GO:0039678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont genome ejection through host cell envelope, long flexible tail mechanism","synonyms":[{"name":"viral genome ejection through host cell envelope, long flexible tail mechanism","type":"related"},{"name":"viral long flexible tail ejection system","type":"exact"}],"termid":"GO:0099001"}


id: PR:P87235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp42 gene.","definition_xrefs":["UniProtKB:P87235","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp42 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.10c","synonyms":[{"name":"Spom972h-rhp42","type":"exact"}],"termid":"PR:P87235"}


id: PBO:0076769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 7","termid":"PBO:0076769"}


id: GO:0019471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-hydroxyproline, C5H9NO3, a derivative of the amino acid proline. The presence of hydroxyproline is essential to produce stable triple helical tropocollagen, hence the problems caused by ascorbate deficiency in scurvy. This unusual amino acid is also present in considerable amounts in the major glycoprotein of primary plant cell walls.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"4-hydroxyproline metabolic process","synonyms":[{"name":"4-hydroxyproline metabolism","type":"exact"}],"termid":"GO:0019471"}


id: MONDO:0012870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2q31.2 deletion syndrome","secondary_identifiers":["MESH:C567344","DOID:0060416","MEDGEN:394109","OMIM:612345","UMLS:C2676724"],"synonyms":[{"name":"chromosome 2q31.2 deletion syndrome","type":"exact"}],"termid":"MONDO:0012870","xrefs":{"Monarch":{"xref_id":"0012870"}}}


id: PBO:0046062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 1","termid":"PBO:0046062"}


id: GO:0036474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process that results in permanent cessation of all vital functions of a cell upon exposure to hydrogen peroxide (H2O2).","definition_xrefs":["GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete cell death in response to hydrogen peroxide (obsolete GO:0036474)","synonyms":[{"name":"cell death in response to H2O2","type":"exact"},{"name":"hydrogen peroxide-mediated cell death","type":"related"}],"termid":"GO:0036474"}


id: GO:0039016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the pronephros over time, from its formation to the mature organ.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in kidney development","termid":"GO:0060995"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling involved in pronephros development","synonyms":[{"name":"cell-cell signaling involved in pronephric kidney development","type":"exact"},{"name":"cell-cell signalling involved in pronephros development","type":"exact"}],"termid":"GO:0039016"}


id: PBO:0035743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_plus-end","termid":"PBO:0035743"}


id: GO:0034544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-4-amino-6-carboxy-2-oxo-hexa-3,5-dienoate + H2O = fumarylpyruvate + NH3.","definition_xrefs":["UM-BBD_reactionID:r0810"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-ACOHDA hydrolase activity (obsolete GO:0034544)","termid":"GO:0034544"}


id: PBO:0042446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 4","termid":"PBO:0042446"}


id: GO:2000428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neutrophil aggregation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte cell-cell adhesion","termid":"GO:1903037"},{"relation_name":"regulates","term_name":"neutrophil aggregation","termid":"GO:0070488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil aggregation","synonyms":[{"name":"regulation of neutrocyte aggregation","type":"exact"},{"name":"regulation of neutrophil leucocyte aggregation","type":"exact"},{"name":"regulation of neutrophilic leukocyte aggregation","type":"exact"}],"termid":"GO:2000428"}


id: MONDO:0003868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the anterior foramen magnum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"foramen magnum meningioma","termid":"MONDO:0003109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior foramen magnum meningioma","secondary_identifiers":["DOID:6381","UMLS:C1332302","MEDGEN:233988","NCIT:C5281"],"synonyms":[{"name":"meningioma of anterior Foramen magnum","type":"exact"},{"name":"meningioma of the anterior Foramen magnum","type":"exact"}],"termid":"MONDO:0003868","xrefs":{"Monarch":{"xref_id":"0003868"}}}


id: GO:0044510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of signal transduction in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete venom-mediated activation of signal transduction in another organism (obsolete GO:0044510)","synonyms":[{"name":"envenomation resulting in positive regulation of signal transduction in another organism","type":"exact"},{"name":"envenomation resulting in positive regulation of signal transduction in other organism","type":"exact"}],"termid":"GO:0044510"}


id: PBO:0060827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECTIN2 pseudogene 1","termid":"PBO:0060827"}


id: PBO:0055394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2824","termid":"PBO:0055394"}


id: PBO:0080234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ATPase assembly factor VMA21","termid":"PBO:0080234"}


id: MONDO:0009527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder caused by mutation in the LMF1 gene resulting in combined lipase deficiency with concomitant hypertriglyceridemia and associated disorders.","definition_xrefs":["NCIT:C126558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"familial chylomicronemia syndrome","termid":"MONDO:0018637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"lipase deficiency, combined","secondary_identifiers":["MEDGEN:340886","UMLS:C1855498","MESH:C535904","OMIM:246650","Orphanet:535453","GARD:10244","DOID:0111422"],"synonyms":[{"name":"LPL and HL deficiency","type":"related"},{"name":"LPL and HTGL deficiency","type":"related"},{"name":"combined lipase deficiency","type":"exact"},{"name":"familial lipase maturation factor 1 deficiency","type":"exact"},{"name":"lipase deficiency combined","type":"related"},{"name":"lipase deficiency, combined","type":"exact"},{"name":"lipoprotein lipase deficiency with hepatic triglyceride lipase deficiency","type":"related"}],"termid":"MONDO:0009527","xrefs":{"Monarch":{"xref_id":"0009527"}}}


id: PBO:0087119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-finger peroxin and E3 ubiquitin ligase; peroxisomal membrane protein with a C-terminal zinc-binding RING domain, forms translocation subcomplex with Pex10p and Pex12p which functions in peroxisomal matrix protein import","termid":"PBO:0087119"}


id: PBO:0030429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_eisosome_filament","termid":"PBO:0030429"}


id: PBO:0089478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon subunit Sec61 homolog","termid":"PBO:0089478"}


id: PBO:0005360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Ufe1 (predicted)","termid":"PBO:0005360"}


id: PBO:0060407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAA20 pseudogene 1","termid":"PBO:0060407"}


id: GO:0050110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions : D-galactosyl-3-(N-acetyl-beta-D-galactosaminyl)-L-serine + H2O = D-galactosyl-3-N-acetyl-beta-D-galactosamine + L-serine and D-galactosyl-3-(N-acetyl-beta-D-galactosaminyl)-L-threonyl + H2O = D-galactosyl-3-N-acetyl-beta-D-galactosamine + L-threonyl.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete endo-alpha-N-acetylgalactosaminidase activity (obsolete GO:0050110)","termid":"GO:0050110"}


id: GO:0019375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactolipids, any glycolipid containing one of more residues of galactose and/or N-acetylgalactosamine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"galactolipid metabolic process","termid":"GO:0019374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"galactolipid biosynthetic process","synonyms":[{"name":"galactolipid anabolism","type":"exact"},{"name":"galactolipid biosynthesis","type":"exact"},{"name":"galactolipid formation","type":"exact"},{"name":"galactolipid synthesis","type":"exact"}],"termid":"GO:0019375"}


id: PBO:0058402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4773-1","termid":"PBO:0058402"}


id: PBO:0063315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCI domain containing 2","termid":"PBO:0063315"}


id: MONDO:0018669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snakebite envenomation","secondary_identifiers":["GARD:21881","SCTID:61288004","Orphanet:449285"],"synonyms":[{"name":"poisoning by venomous snake","type":"exact"},{"name":"poisoning caused by venomous snake","type":"related"},{"name":"snake bite poisoning","type":"related"},{"name":"snake venom causing toxic effect","type":"related"},{"name":"snake venom poisoning","type":"related"},{"name":"toxic effect of bite of venomous snake","type":"related"}],"termid":"MONDO:0018669","xrefs":{"Monarch":{"xref_id":"0018669"}}}


id: PBO:0013034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor (unnamed)","termid":"PBO:0013034"}


id: PR:O94752
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An enhancer of mRNA-decapping protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13612:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of mRNA-decapping protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.11c","secondary_identifiers":["UniProtKB:O94752"],"synonyms":[{"name":"SPBC18E5.11c","type":"related"},{"name":"Spom972h-EDC3","type":"exact"}],"termid":"PR:O94752"}


id: PBO:0040095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosyltransferase 2B, pseudogene","termid":"PBO:0040095"}


id: PBO:0069518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 787, pseudogene","termid":"PBO:0069518"}


id: PBO:0065614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase 4A2","termid":"PBO:0065614"}


id: MONDO:0025494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by outbreaks of late term abortions, high numbers of stillbirths and mummified or weak newborn piglets, and respiratory disease in young unweaned and weaned pigs. It is caused by porcine respiratory and reproductive syndrome virus. (Radostits et al., Veterinary Medicine, 8th ed, p1048)","definition_xrefs":["MESH:D019318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porcine reproductive and respiratory syndrome","synonyms":[{"name":"PRRS","type":"exact"},{"name":"blue eared pig disease","type":"exact"},{"name":"blue-eared pig disease","type":"exact"},{"name":"mystery swine disease","type":"exact"},{"name":"pig disease, blue-eared","type":"exact"},{"name":"porcine epidemic abortion and respiratory syndrome","type":"exact"},{"name":"swine disease, mystery","type":"related"},{"name":"swine infertility and respiratory syndrome","type":"exact"}],"termid":"MONDO:0025494","xrefs":{"Monarch":{"xref_id":"0025494"}}}


id: PBO:0058672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6800","termid":"PBO:0058672"}


id: PBO:0018182
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HMG1","termid":"PBO:0018182"}


id: GO:0034393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of smooth muscle cell apoptotic process.","definition_xrefs":["GOC:rl","GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of muscle cell apoptotic process","termid":"GO:0010661"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell apoptotic process","termid":"GO:0034391"},{"relation_name":"positively_regulates","term_name":"smooth muscle cell apoptotic process","termid":"GO:0034390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of smooth muscle cell apoptotic process","synonyms":[{"name":"activation of smooth muscle cell apoptosis","type":"narrow"},{"name":"positive regulation of SMC apoptosis","type":"exact"},{"name":"positive regulation of smooth muscle cell apoptosis","type":"narrow"},{"name":"stimulation of smooth muscle cell apoptosis","type":"narrow"},{"name":"up regulation of smooth muscle cell apoptosis","type":"exact"},{"name":"up-regulation of smooth muscle cell apoptosis","type":"exact"},{"name":"upregulation of smooth muscle cell apoptosis","type":"exact"}],"termid":"GO:0034393"}


id: MONDO:1030002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental disorder affecting the growth and development of the proximal end of the femur (thigh bone) near the hip joint characterized by avascular necrosis of the femoral head, cystic changes of the femoral head, and/or sclerosis of the femoral head. It is a relatively milder form of the other skeletal disorders associated with COL2A1.","direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysplasia of the proximal femoral epiphyses","secondary_identifiers":["MEDGEN:481394","UMLS:C3279764"],"termid":"MONDO:1030002","xrefs":{"Monarch":{"xref_id":"1030002"}}}


id: SO:0000965
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"double","termid":"SO:0000985"},{"relation_name":"is_a","term_name":"RNA_chromosome","termid":"SO:0000961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double_stranded_RNA_chromosome","synonyms":[{"name":"double stranded RNA chromosome","type":"exact"}],"termid":"SO:0000965"}


id: PR:O94500
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11780:SF0","PRO:DNx","OMA:SCHPO03130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-ubiquinone oxidoreductase 51 kDa subunit homolog SPBC18E5.10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.10","secondary_identifiers":["UniProtKB:O94500"],"synonyms":[{"name":"Spom972h-NDUFV1","type":"exact"}],"termid":"PR:O94500"}


id: PBO:0053944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1247","termid":"PBO:0053944"}


id: MONDO:0006956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of infectious diseases that is caused by Rickettsia.","definition_xrefs":["NCIT:C34991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rickettsiosis","secondary_identifiers":["SCTID:37246009","ICD9:083.9","MedDRA:10061495","UMLS:C0035585","GARD:19827","EFO:1001162","MESH:D012282","Orphanet:102021","ICD10CM:A75-A79","MEDGEN:20584"],"synonyms":[{"name":"Rickettsia caused disease or disorder","type":"exact"},{"name":"Rickettsia disease or disorder","type":"exact"},{"name":"Rickettsia infection","type":"exact"},{"name":"Rickettsia infectious disease","type":"exact"},{"name":"Rickettsiae disease","type":"exact"},{"name":"Rickettsial disease","type":"exact"},{"name":"Rickettsial infectious disease","type":"exact"},{"name":"Rickettsial infectious disorder","type":"exact"},{"name":"Rickettsiosis","type":"exact"},{"name":"infection, Rickettsia","type":"exact"},{"name":"infections, Rickettsia","type":"exact"}],"termid":"MONDO:0006956","xrefs":{"Monarch":{"xref_id":"0006956"}}}


id: RO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"before_or_simultaneous_with","termid":"RO:0002081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simultaneous_with","termid":"RO:0002082"}


id: MONDO:0011819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 19 (SCA19) is a very rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by mild cerebellar ataxia, cognitive impairment, low scores on the Wisconsin Card Sorting Test measuring executive function, myoclonus, and postural tremor.","definition_xrefs":["Orphanet:98772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia type 19/22","secondary_identifiers":["UMLS:C1846367","MESH:C537198","MESH:C542540","OMIM:607346","SCTID:719251009","MEDGEN:339504","NCIT:C163756","DOID:0050970","GARD:12365"],"synonyms":[{"name":"SCA19","type":"related"},{"name":"SCA19/22","type":"exact"},{"name":"spinocerebellar ataxia 19","type":"related"},{"name":"spinocerebellar ataxia 19 and 22","type":"related"},{"name":"spinocerebellar ataxia 22","type":"related"},{"name":"spinocerebellar ataxia type 19","type":"exact"}],"termid":"MONDO:0011819","xrefs":{"Monarch":{"xref_id":"0011819"}}}


id: PBO:0063772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 3","termid":"PBO:0063772"}


id: PBO:0069428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 693, pseudogene","termid":"PBO:0069428"}


id: PBO:0024857
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM4/6/7 helicase complex binds a 3' overhang and translocates along single-stranded DNA in the 3' to 5' direction","termid":"PBO:0024857"}


id: FYPO:0007113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects the organization of the microtubule cytoskeleton during all or part of the meiotic cell cycle. Microtubule cytoskeleton organization is a cellular process that results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.","definition_xrefs":["PomBase:mah","GO:0000226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton organization during meiotic cell cycle","synonyms":[{"name":"abnormal microtubule cytoskeleton organisation during meiotic cell cycle","type":"exact"},{"name":"abnormal microtubule organisation during meiotic cell cycle","type":"related"},{"name":"abnormal microtubule organization during meiotic cell cycle","type":"related"},{"name":"disorganized microtubule cytoskeleton during meiotic cell cycle","type":"related"},{"name":"microtubule cytoskeleton defects during meiotic cell cycle","type":"exact"},{"name":"microtubule organization defects during meiotic cell cycle","type":"related"}],"termid":"FYPO:0007113"}


id: MONDO:0020676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of central nervous system or retinal vasculature (obsolete MONDO:0020676)","synonyms":[{"name":"central nervous system or retinal vascular disease","type":"exact"},{"name":"retina/CNS vascular disease","type":"exact"}],"termid":"MONDO:0020676","xrefs":{"Monarch":{"xref_id":"0020676"}}}


id: GO:0051615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of histamine into a cell, typically presynaptic neurons or glial cells. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter uptake","termid":"GO:0001504"},{"relation_name":"is_a","term_name":"histamine transport","termid":"GO:0051608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"histamine uptake","synonyms":[{"name":"histamine import","type":"exact"}],"termid":"GO:0051615"}


id: PBO:0073158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit gamma","termid":"PBO:0073158"}


id: MONDO:0005921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malaria resulting from infection by Plasmodium vivax.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malaria","termid":"MONDO:0005136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Plasmodium vivax malaria","secondary_identifiers":["EFO:0007445","ICD9:084.1","SCTID:27052006","DOID:12978","ICD10CM:B51","UMLS:C0024537","MESH:D016780","MEDGEN:6186","NCIT:C34800"],"synonyms":[{"name":"malaria by Plasmodium vivax","type":"exact"},{"name":"vivax malaria","type":"exact"}],"termid":"MONDO:0005921","xrefs":{"Monarch":{"xref_id":"0005921"}}}


id: PBO:0069838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1124, pseudogene","termid":"PBO:0069838"}


id: GO:0086088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of a Purkinje myocyte contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in Purkinje myocyte action potential repolarization","termid":"GO:0086088"}


id: GO:0060124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the regulated release of growth hormone from a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth hormone secretion","termid":"GO:0060123"},{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"positively_regulates","term_name":"growth hormone secretion","termid":"GO:0030252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of growth hormone secretion","termid":"GO:0060124"}


id: MONDO:0002733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0002733 (obsolete MONDO:0002733)","termid":"MONDO:0002733","xrefs":{"Monarch":{"xref_id":"0002733"}}}


id: PBO:0079737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 2B","termid":"PBO:0079737"}


id: MONDO:0017953
data:
  {"annotated_genes":["SJAG_01474","SJAG_04865","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"},{"annotations":[87102,87101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[85426,85427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"}]},"cv_name":"mondo","definition":"An instance of periodic fever syndrome that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodic fever syndrome","termid":"MONDO:0015137"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_01474":null,"SJAG_04865":null},"genotype_count":0,"is_obsolete":false,"name":"hereditary periodic fever syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D056660","Orphanet:324924","UMLS:C0751422","MEDGEN:199651","GARD:21453"],"synonyms":[{"name":"hereditary periodic fever syndrome","type":"exact"}],"termid":"MONDO:0017953","terms_by_termid":{"MONDO:0009849":null,"MONDO:0012481":null,"MONDO:0013766":null},"xrefs":{"Monarch":{"xref_id":"0017953"}}}


id: PBO:0086183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for uridine thiolation of Gln, Lys, and Glu tRNAs; required for the thiolation of uridine at the wobble position of Gln, Lys, and Glu tRNAs; has a role in urmylation and in invasive and pseudohyphal growth; inhibits replication of Brome mosaic virus in S. cerevisiae","termid":"PBO:0086183"}


id: PBO:0077320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 59","termid":"PBO:0077320"}


id: PBO:0083801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein required for the DNA integrity checkpoint pathways; interacts physically with Mec1p and contributes to its activation; putative homolog of S. pombe Rad26 and human ATRIP; forms nuclear foci upon DNA replication stress","termid":"PBO:0083801"}


id: PBO:0066049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1 GTPase activating protein 2","termid":"PBO:0066049"}


id: PR:O94612
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-related protein FAM58A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized cyclin-L1-like protein C1296.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.05c","secondary_identifiers":["UniProtKB:O94612"],"synonyms":[{"name":"Spom972h-FAM58A","type":"exact"}],"termid":"PR:O94612"}


id: PBO:0001793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin family C2 domain protein, Syn1","termid":"PBO:0001793"}


id: MONDO:0014365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the TAF4B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 13","secondary_identifiers":["DOID:0070182","MEDGEN:862886","UMLS:C4014449","OMIM:615841","GARD:16019"],"synonyms":[{"name":"SPGF13","type":"related"},{"name":"TAF4B azoospermia","type":"exact"},{"name":"azoospermia caused by mutation in TAF4B","type":"exact"},{"name":"spermatogenic failure 13","type":"exact"},{"name":"spermatogenic failure type 13","type":"exact"}],"termid":"MONDO:0014365","xrefs":{"Monarch":{"xref_id":"0014365"}}}


id: PBO:0087994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase; required for de novo biosynthesis of NAD+ from tryptophan via kynurenine; up-regulated by telomere uncapping, and interacts genetically with capping gene CDC13; overexpression reduces lipid droplet accumulation by skewing glycolytic flux towards biosynthesis of shikimate, aromatic amino acids, and NAD+ during aging and extends lifespan; regulated by Hst1p and Aftp","termid":"PBO:0087994"}


id: GO:0052319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phytoalexin biosynthesis, the chemical reactions and pathways resulting in the formation of phytoalexins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phytoalexin biosynthetic process (obsolete GO:0052319)","synonyms":[{"name":"regulation of phytoalexin biosynthesis","type":"exact"}],"termid":"GO:0052319"}


id: GO:0042662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mesoderm cell fate specification.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate specification","termid":"GO:0042661"},{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell differentiation","termid":"GO:1905771"},{"relation_name":"negatively_regulates","term_name":"mesodermal cell fate specification","termid":"GO:0007501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesodermal cell fate specification","synonyms":[{"name":"down regulation of mesodermal cell fate specification","type":"exact"},{"name":"down-regulation of mesodermal cell fate specification","type":"exact"},{"name":"downregulation of mesodermal cell fate specification","type":"exact"},{"name":"inhibition of mesodermal cell fate specification","type":"narrow"},{"name":"suppression of mesodermal cell fate","type":"exact"}],"termid":"GO:0042662"}


id: GO:0070873
data:
  {"annotated_genes":["SJAG_01376","SJAG_00963"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79207,77530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving glycogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"regulates","term_name":"glycogen metabolic process","termid":"GO:0005977"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00963":null,"SJAG_01376":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of glycogen metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of glycogen metabolism","type":"exact"}],"termid":"GO:0070873","terms_by_termid":{"GO:0045719":null}}


id: GO:0002857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell mediated immune response to a tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated immunity","termid":"GO:0002717"},{"relation_name":"is_a","term_name":"positive regulation of immune response to tumor cell","termid":"GO:0002839"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002855"},{"relation_name":"positively_regulates","term_name":"natural killer cell mediated immune response to tumor cell","termid":"GO:0002423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell mediated immune response to tumor cell","synonyms":[{"name":"activation of natural killer cell mediated immune response to tumor cell","type":"narrow"},{"name":"stimulation of natural killer cell mediated immune response to tumor cell","type":"narrow"},{"name":"up regulation of natural killer cell mediated immune response to tumor cell","type":"exact"},{"name":"up-regulation of natural killer cell mediated immune response to tumor cell","type":"exact"},{"name":"upregulation of natural killer cell mediated immune response to tumor cell","type":"exact"}],"termid":"GO:0002857"}


id: MONDO:0015854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supernumerary breasts","secondary_identifiers":["GARD:20195","icd11.foundation:1458532658","MEDGEN:78583","MedDRA:10049786","UMLS:C0266010","Orphanet:180182"],"synonyms":[{"name":"accessory breasts","type":"exact"},{"name":"polymastia","type":"exact"}],"termid":"MONDO:0015854","xrefs":{"Monarch":{"xref_id":"0015854"}}}


id: PBO:0000198
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.16","termid":"PBO:0000198"}


id: PBO:0078667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 3-2","termid":"PBO:0078667"}


id: FYPO:0001554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA processing is abnormal. tRNA processing is the conversion a primary tRNA transcript into a mature tRNA molecules.","definition_xrefs":["GO:0008033","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"abnormal tRNA processing","synonyms":[{"name":"abnormal tRNA processing during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA processing during vegetative growth","type":"exact"}],"termid":"FYPO:0001554"}


id: PBO:0069161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 413, pseudogene","termid":"PBO:0069161"}


id: MONDO:0700085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal disorder consisting of the presence of three chromosomes of the same type in addition to the normal diploid number.","direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploidy","termid":"MONDO:0700064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentasomy","termid":"MONDO:0700085","xrefs":{"Monarch":{"xref_id":"0700085"}}}


id: MONDO:1010988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, horse","secondary_identifiers":["OMIA:000487-9796"],"termid":"MONDO:1010988","xrefs":{"Monarch":{"xref_id":"1010988"}}}


id: PR:G2TRU7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf15 gene.","definition_xrefs":["UniProtKB:G2TRU7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.17","synonyms":[{"name":"Spom972h-wtf15","type":"exact"}],"termid":"PR:G2TRU7"}


id: GO:1904088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epiboly involved in gastrulation with mouth forming second.","definition_xrefs":["GOC:TermGenie","PMID:24892953","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epiboly involved in gastrulation with mouth forming second","termid":"GO:1904086"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"epiboly involved in gastrulation with mouth forming second","termid":"GO:0055113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epiboly involved in gastrulation with mouth forming second","synonyms":[{"name":"activation of epiboly involved in gastrulation with mouth forming second","type":"narrow"},{"name":"up regulation of epiboly involved in gastrulation with mouth forming second","type":"exact"},{"name":"up-regulation of epiboly involved in gastrulation with mouth forming second","type":"exact"},{"name":"upregulation of epiboly involved in gastrulation with mouth forming second","type":"exact"}],"termid":"GO:1904088"}


id: PBO:0057148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 296","termid":"PBO:0057148"}


id: GO:0009137
data:
  {"annotated_genes":["SJAG_06622","SJAG_02369","SJAG_04192","SJAG_00685","SJAG_03660","SJAG_05314","SJAG_02785","SJAG_02009","SJAG_02796","SJAG_04495","SJAG_00027","SJAG_03828","SJAG_06621","SJAG_00605","SJAG_04048","SJAG_02135","SJAG_02107","SJAG_03373","SJAG_00839","SJAG_04334","SJAG_03903","SJAG_01310","SJAG_02945","SJAG_00461"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116652,103698,105777,109699,109697,109703,105776,106146,109701,95352,98318,98590,103954,109698,78210,109702,94863,105778,106147,109700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[73408,76377],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[70420],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine nucleoside diphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate catabolic process","termid":"GO:0009134"},{"relation_name":"is_a","term_name":"purine nucleoside diphosphate metabolic process","termid":"GO:0009135"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine nucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside diphosphate breakdown","type":"exact"},{"name":"purine nucleoside diphosphate catabolism","type":"exact"},{"name":"purine nucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009137","terms_by_termid":{"GO:0006110":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: PBO:0091821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane spermine family transmembrane transporter Caf5","termid":"PBO:0091821"}


id: PR:O13290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytoplasmic dynein 1 heavy chain 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein heavy chain, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.06c","secondary_identifiers":["UniProtKB:O13290"],"synonyms":[{"name":"DYHC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DYNC1H1","type":"exact"},{"name":"dynein heavy chain, cytosolic (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13290"}


id: PBO:0074393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM2 intronic transcript 1","termid":"PBO:0074393"}


id: MONDO:0007942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mammastatin","secondary_identifiers":["UMLS:C3887696","OMIM:154370","MEDGEN:854535","MESH:C060120"],"synonyms":[{"name":"Mammastatin","type":"exact"}],"termid":"MONDO:0007942","xrefs":{"Monarch":{"xref_id":"0007942"}}}


id: MONDO:0700081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition beginning in the first day of life that results from inadequate surfactant production, causing increased work of breathing and impaired gas exchange.","definition_xrefs":["SCTID:46775006"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute respiratory failure","termid":"MONDO:0001208"},{"relation_name":"is_a","term_name":"primary interstitial lung disease specific to childhood","termid":"MONDO:0017015"},{"relation_name":"is_a","term_name":"pediatric acute respiratory distress syndrome","termid":"MONDO:0100131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"newborn respiratory distress syndrome","secondary_identifiers":["EFO:1000644","DOID:12716","NCIT:C27560","ICD9:769"],"synonyms":[{"name":"HMD - hyaline membrane disease","type":"exact"},{"name":"NRDS","type":"related"},{"name":"RDS","type":"broad"},{"name":"RDS - infants","type":"related"},{"name":"RDS Of newborns","type":"exact"},{"name":"RDS of prematurity","type":"narrow"},{"name":"RDS, respiratory distress syndrome Of newborns","type":"exact"},{"name":"hyaline membrane disease","type":"exact"},{"name":"infant ARDS","type":"exact"},{"name":"infant acute respiratory distress syndrome","type":"exact"},{"name":"infant respiratory distress syndrome","type":"exact"},{"name":"neonatal respiratory distress","type":"exact"},{"name":"neonatal respiratory distress syndrome","type":"exact"},{"name":"newborns (RDS), respiratory distress syndrome Of","type":"exact"},{"name":"pulmonary hyaline membrane disease","type":"exact"},{"name":"pulmonary hypoperfusion syndrome of newborn","type":"exact"},{"name":"respiratory distress syndrome","type":"broad"},{"name":"respiratory distress syndrome Of newborns","type":"exact"},{"name":"respiratory distress syndrome Of newborns (RDS)","type":"exact"},{"name":"respiratory distress syndrome in premature infants","type":"narrow"},{"name":"respiratory distress syndrome in the newborn","type":"exact"},{"name":"respiratory distress syndrome of newborn","type":"exact"},{"name":"respiratory distress syndrome, infant","type":"related"},{"name":"syndrome Of newborns (RDS), respiratory distress","type":"exact"}],"termid":"MONDO:0700081","xrefs":{"Monarch":{"xref_id":"0700081"}}}


id: PBO:0055410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2840","termid":"PBO:0055410"}


id: MONDO:0032932
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85852],"is_not":false,"summary":null,"term":"MONDO:0032932"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 18","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1713890","OMIM:618811","DOID:0070449","UMLS:C5394140"],"synonyms":[{"name":"MITOCHONDRIAL DNA DEPLETION SYNDROME 18","type":"related"},{"name":"MTDPS18","type":"related"}],"termid":"MONDO:0032932","terms_by_termid":{"MONDO:0032932":null},"xrefs":{"Monarch":{"xref_id":"0032932"}}}


id: GO:0060416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth hormone stimulus. Growth hormone is a peptide hormone that binds to the growth hormone receptor and stimulates growth.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to growth hormone","synonyms":[{"name":"response to growth hormone stimulus","type":"exact"}],"termid":"GO:0060416"}


id: PBO:0052166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 14","termid":"PBO:0052166"}


id: PBO:0074025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 15 pseudogene 3","termid":"PBO:0074025"}


id: GO:0048094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in males.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex-specific pigmentation","termid":"GO:0048071"},{"relation_name":"part_of","term_name":"male sex differentiation","termid":"GO:0046661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male pigmentation","termid":"GO:0048094"}


id: PBO:0057644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1236","termid":"PBO:0057644"}


id: PBO:0016078
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated non-conserved orf in low complexity region","termid":"PBO:0016078"}


id: GO:0031751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a D4 dopamine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine receptor binding","termid":"GO:0050780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"D4 dopamine receptor binding","synonyms":[{"name":"D4 dopamine receptor ligand","type":"narrow"}],"termid":"GO:0031751"}


id: MONDO:0003684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, usually low grade chondrosarcoma characterized by the presence of tumor cells with clear cytoplasm. It usually arises in the epiphyseal ends of long bones.","definition_xrefs":["NCIT:C6475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone chondrosarcoma","termid":"MONDO:0000515"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"clear cell chondrosarcoma","secondary_identifiers":["UMLS:C1266167","DOID:5867","ICDO:9242/3","MEDGEN:226848"],"synonyms":[{"name":"clear cell chondrosarcoma","type":"exact"},{"name":"clear cell chondrosarcoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003684","xrefs":{"Monarch":{"xref_id":"0003684"}}}


id: PBO:0005171
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.6.2.2","termid":"PBO:0005171"}


id: MONDO:0015558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"indolent systemic mastocytosis","termid":"MONDO:0020331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"isolated bone marrow mastocytosis","secondary_identifiers":["icd11.foundation:922733413","GARD:20037","UMLS:C4509020","MEDGEN:1672479","Orphanet:158778","NCIT:C198573"],"termid":"MONDO:0015558","xrefs":{"Monarch":{"xref_id":"0015558"}}}


id: GO:0031841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuropeptide Y receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neuropeptide Y receptor binding","synonyms":[{"name":"NPY receptor binding","type":"exact"},{"name":"neuropeptide Y receptor ligand","type":"narrow"}],"termid":"GO:0031841"}


id: FYPO:0001735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of an assembled iron-sulfur cluster from a scaffold protein to an acceptor protein is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal iron-sulfur cluster transfer","synonyms":[{"name":"abnormal iron-sulfur cluster transfer during mitotic cell cycle","type":"related"},{"name":"abnormal iron-sulfur cluster transfer during vegetative growth","type":"exact"},{"name":"abnormal iron-sulphur cluster transfer","type":"exact"}],"termid":"FYPO:0001735"}


id: PBO:0057061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 145","termid":"PBO:0057061"}


id: PBO:0028131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_deacetylase_activity","termid":"PBO:0028131"}


id: PBO:0034746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved GTPase Gpn2 (predicted)","termid":"PBO:0034746"}


id: PBO:0039208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B10 pseudogene 2","termid":"PBO:0039208"}


id: PR:Q9USJ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L7/L12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L12, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.09c","secondary_identifiers":["UniProtKB:Q9USJ9"],"synonyms":[{"name":"Spom972h-rplL","type":"exact"},{"name":"mitochondrial-nucleoid protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USJ9"}


id: GO:0043051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the contraction and relaxation movements of the pharyngeal muscle that mediates feeding in nematodes.","definition_xrefs":["GOC:cab1","PMID:2181052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eating behavior","termid":"GO:1903998"},{"relation_name":"regulates","term_name":"nematode pharyngeal pumping","termid":"GO:0043050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nematode pharyngeal pumping","termid":"GO:0043051"}


id: GO:0060763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic growth of the large, club-shaped terminal end of a mammary gland duct during prepubertal growth and during puberty.","definition_xrefs":["PMID:10804170","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"mammary gland duct morphogenesis","termid":"GO:0060603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary duct terminal end bud growth","termid":"GO:0060763"}


id: PBO:0090016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex DNA helicase (human ERCC3) subunit Ptr8","termid":"PBO:0090016"}


id: PBO:0070221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 154 pseudogene","termid":"PBO:0070221"}


id: PBO:0002829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0002829"}


id: GO:1903004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein K63-linked deubiquitination.","definition_xrefs":["GOC:TermGenie","PMID:22970133","GO_REF:0000058","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein deubiquitination","termid":"GO:0090085"},{"relation_name":"regulates","term_name":"protein K63-linked deubiquitination","termid":"GO:0070536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein K63-linked deubiquitination","termid":"GO:1903004"}


id: GO:0072216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of metanephros development. Metanephros development is the process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephros development","termid":"GO:0072215"},{"relation_name":"is_a","term_name":"positive regulation of kidney development","termid":"GO:0090184"},{"relation_name":"positively_regulates","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephros development","termid":"GO:0072216"}


id: PBO:0092029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Valine (uac), mitochondrial","termid":"PBO:0092029"}


id: GO:0180005
data:
  {"annotated_genes":["SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112276],"is_not":false,"summary":null,"term":"GO:0180005"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat--phospho-L-threonine (consensus YSPTSPS)(position 4) + H2O = RNA polymerase II large subunit + phosphate.","definition_xrefs":["PMID:22622228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat phosphatase activity","termid":"GO:0008420"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0004721","GO:0003674","GO:0003824","GO:0140096","GO:0016788"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II C-terminal domain T4 phosphatase activity","type":"exact"}],"termid":"GO:0180005","terms_by_termid":{"GO:0180005":null}}


id: MONDO:0018432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mucinosis","termid":"MONDO:0002523"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lichen myxedematosus","secondary_identifiers":["GARD:21709","ICD9:701.8","SCTID:111197009","UMLS:C5848049","MEDGEN:1848864","Orphanet:402007"],"synonyms":[{"name":"lichen myxoedematosus","type":"exact"},{"name":"lichenoid myxedema","type":"related"},{"name":"papular mucinosis","type":"related"}],"termid":"MONDO:0018432","xrefs":{"Monarch":{"xref_id":"0018432"}}}


id: PBO:0082043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase; involved in ubiquinone (Coenzyme Q) biosynthesis; localizes to the matrix face of the mitochondrial inner membrane in a large complex with other ubiquinone biosynthetic enzymes; respiratory defect of the null mutant is partially complemented by human COQ5","termid":"PBO:0082043"}


id: PBO:0028883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K36_methylation","termid":"PBO:0028883"}


id: GO:0033029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of neutrophil apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"regulates","term_name":"neutrophil apoptotic process","termid":"GO:0001781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil apoptotic process","synonyms":[{"name":"regulation of neutrophil apoptosis","type":"narrow"}],"termid":"GO:0033029"}


id: GO:0075270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of aecium development, a process in which a cuplike structure containing chains of aeciospores is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of aecium development","termid":"GO:0075268"},{"relation_name":"negatively_regulates","term_name":"aecium development","termid":"GO:0075267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aecium development","termid":"GO:0075270"}


id: PBO:0003990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E1-like activator enzyme Fub2 (predicted)","termid":"PBO:0003990"}


id: PBO:0066566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHBDF1 pseudogene 1","termid":"PBO:0066566"}


id: GO:0001921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor recycling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor recycling","termid":"GO:0001919"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"positively_regulates","term_name":"receptor recycling","termid":"GO:0001881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of receptor recycling","synonyms":[{"name":"activation of receptor recycling","type":"narrow"},{"name":"stimulation of receptor recycling","type":"narrow"},{"name":"up regulation of receptor recycling","type":"exact"},{"name":"up-regulation of receptor recycling","type":"exact"},{"name":"upregulation of receptor recycling","type":"exact"}],"termid":"GO:0001921"}


id: FYPO:0000603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of G1 phase of a mitotic cell cycle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1 phase progression","termid":"FYPO:0000602"},{"relation_name":"is_a","term_name":"decreased duration of mitotic cell cycle phase","termid":"FYPO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased duration of mitotic G1 phase","synonyms":[{"name":"decreased duration of G1 phase during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic G1 phase during vegetative growth","type":"exact"},{"name":"mitotic cell cycle progression in G1 phase: decreased duration","type":"related"},{"name":"reduced duration of mitotic G1 phase","type":"exact"}],"termid":"FYPO:0000603"}


id: GO:0070795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of conidiophore development, a process that leads to the formation of a conidiophore. The conidiophore is a specialized hypha that extends aerially from the growth substrate and bears conidia, or asexual spores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conidiophore development","termid":"GO:0070793"},{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"positively_regulates","term_name":"conidiophore development","termid":"GO:0070787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of conidiophore development","termid":"GO:0070795"}


id: FYPO:0008098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the oscillations of homologous chromosomes which occurs at meiotic metaphase I is reduced.","definition_xrefs":["PMID:33529549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal chromosome oscillation at meiotic metaphase I","synonyms":[{"name":"aberrant chromosome oscillation at meiotic metaphase I","type":"exact"}],"termid":"FYPO:0008098"}


id: PBO:0070767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L11 pseudogene 3","termid":"PBO:0070767"}


id: MONDO:0004357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma of the larynx that arises from the supraglottic area.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supraglottis cancer","termid":"MONDO:0001724"},{"relation_name":"is_a","term_name":"laryngeal carcinoma","termid":"MONDO:0002358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of supraglottis","secondary_identifiers":["SCTID:372105009","NCIT:C5973","DOID:7763","UMLS:C1299240","MEDGEN:266243"],"synonyms":[{"name":"cancer of supraglottis","type":"exact"},{"name":"cancer of the supraglottis","type":"exact"},{"name":"carcinoma of supraglottic part of larynx","type":"exact"},{"name":"carcinoma of supraglottis","type":"exact"},{"name":"carcinoma of the supraglottis","type":"exact"},{"name":"supraglottic cancer","type":"exact"},{"name":"supraglottic carcinoma","type":"exact"},{"name":"supraglottic part of larynx carcinoma","type":"exact"},{"name":"supraglottic throat cancer","type":"exact"},{"name":"supraglottis carcinoma","type":"exact"}],"termid":"MONDO:0004357","xrefs":{"Monarch":{"xref_id":"0004357"}}}


id: PBO:0086395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cytochrome b5 reductase, localized to the plasma membrane; may be involved in regulation of lifespan; required for maturation of Gas1p and Pho8p, proposed to be involved in protein trafficking; PGA3 has a paralog, AIM33, that arose from the whole genome duplication","termid":"PBO:0086395"}


id: PBO:0054667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2073","termid":"PBO:0054667"}


id: GO:1905898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to endoplasmic reticulum stress.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bc","PMID:21803450","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"positively_regulates","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to endoplasmic reticulum stress","synonyms":[{"name":"activation of ER stress response","type":"narrow"},{"name":"activation of cellular response to endoplasmic reticulum stress","type":"narrow"},{"name":"activation of response to ER stress","type":"narrow"},{"name":"activation of response to endoplasmic reticulum stress","type":"narrow"},{"name":"positive regulation of ER stress response","type":"exact"},{"name":"positive regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"positive regulation of response to ER stress","type":"exact"},{"name":"up regulation of ER stress response","type":"exact"},{"name":"up regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"up regulation of response to ER stress","type":"exact"},{"name":"up regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of ER stress response","type":"exact"},{"name":"up-regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of response to ER stress","type":"exact"},{"name":"up-regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of ER stress response","type":"exact"},{"name":"upregulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of response to ER stress","type":"exact"},{"name":"upregulation of response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1905898"}


id: PBO:0048099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin mitochondrial","termid":"PBO:0048099"}


id: PBO:0018262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho4 (predicted)","termid":"PBO:0018262"}


id: MONDO:0004746
data:
  {"annotated_genes":["SJAG_04003","SJAG_04601"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010912"},{"annotations":[85975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958176"}]},"cv_name":"mondo","definition":"A myopathy that involves the extra-ocular muscle.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye adnexa disorder","termid":"MONDO:0000462"},{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04003":null,"SJAG_04601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy of extraocular muscle","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:376.82","MEDGEN:509895","SCTID:57130002","UMLS:C0155286","DOID:929"],"synonyms":[{"name":"extra-ocular muscle myopathy","type":"exact"},{"name":"myopathy of extra-ocular muscle","type":"exact"},{"name":"myopathy of extraocular muscles","type":"exact"}],"termid":"MONDO:0004746","terms_by_termid":{"MONDO:0010912":null,"MONDO:0958176":null},"xrefs":{"Monarch":{"xref_id":"0004746"}}}


id: GO:0090330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet activation","termid":"GO:0010543"},{"relation_name":"is_a","term_name":"regulation of homotypic cell-cell adhesion","termid":"GO:0034110"},{"relation_name":"regulates","term_name":"platelet aggregation","termid":"GO:0070527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of platelet aggregation","termid":"GO:0090330"}


id: PBO:0047760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor beta","termid":"PBO:0047760"}


id: PBO:0086676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RDN5-4; YLR157C-C has a paralog, YLR154C-H, that arose from a segmental duplication","termid":"PBO:0086676"}


id: PBO:0074715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 75B","termid":"PBO:0074715"}


id: MONDO:0859598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute erythroid leukemia characterized by the presence of at least 50% erythroid precursors and at least 20% myeloblasts in the bone marrow.","definition_xrefs":["DOID:0080916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute erythroid leukemia","termid":"MONDO:0017858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"erythroleukemia","secondary_identifiers":["MEDGEN:1614281","NCIT:C7152","UMLS:C4520840"],"termid":"MONDO:0859598","xrefs":{"Monarch":{"xref_id":"0859598"}}}


id: PBO:0044605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 11","termid":"PBO:0044605"}


id: PR:O74536
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.03c","synonyms":[{"name":"Spom972h-ssp2","type":"exact"}],"termid":"PR:O74536"}


id: PBO:0062683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 4","termid":"PBO:0062683"}


id: MONDO:0008155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteomesopyknosis is a very rare benign bone disorder characterized by bone dysplasia manifested by patchy sclerosis of the axial skeleton and increased bone mineral content.","definition_xrefs":["Orphanet:2777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis","termid":"MONDO:0017198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteomesopyknosis","secondary_identifiers":["UMLS:C0432264","MEDGEN:98482","OMIM:166450","MESH:C537792","GARD:391","icd11.foundation:455371627","SCTID:254125009"],"synonyms":[{"name":"axial osteosclerosis","type":"exact"},{"name":"osteomesopyknosis","type":"exact"}],"termid":"MONDO:0008155","xrefs":{"Monarch":{"xref_id":"0008155"}}}


id: PBO:0117134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSPN antisense RNA 1","termid":"PBO:0117134"}


id: GO:0072464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of meiotic spindle assembly checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to meiotic cell cycle checkpoint signaling","termid":"GO:0072410"},{"relation_name":"is_a","term_name":"response to spindle assembly checkpoint signaling","termid":"GO:0072485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to meiotic spindle assembly checkpoint signaling","synonyms":[{"name":"meiotic spindle assembly checkpoint effector process","type":"exact"},{"name":"response to signal involved in meiotic spindle assembly checkpoint","type":"exact"}],"termid":"GO:0072464"}


id: PR:000044737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphoserine at position 5 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PomBase:VW","PMID:28367989","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S5)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 phosphorylated 3 (Schizosaccharomyces pombe)","type":"exact"},{"name":"S5P-Pol II (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:3","type":"exact"},{"name":"rpb1/Phos(CTD-S5)","type":"exact"}],"termid":"PR:000044737"}


id: FYPO:0005077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell becomes elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is subject to glucose starvation.","definition_xrefs":["PMID:17179073","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"elongated cell during glucose starvation","synonyms":[{"name":"cell morphology, elongated cell during glucose starvation","type":"exact"},{"name":"elongated cell during glucose depletion","type":"exact"},{"name":"elongated cell during glucose deprivation","type":"exact"},{"name":"long cell during glucose starvation","type":"exact"}],"termid":"FYPO:0005077"}


id: GO:1990584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of accessory proteins (cardiac troponin T, cardiac troponin I and cardiac troponin C) found associated with actin in cardiac muscle thin filaments; involved in calcium regulation important for muscle contraction.","definition_xrefs":["PMID:12840750","GOC:ame"],"direct_ancestors":[{"relation_name":"is_a","term_name":"troponin complex","termid":"GO:0005861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015629","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cardiac Troponin complex","synonyms":[{"name":"cTnC:cTnI:cTnT","type":"related"}],"termid":"GO:1990584"}


id: FYPO:0001465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration briefly increases to a lesser extent than normal immediately following an extracellular Ca2+ stimulus. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PMID:21811607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal immediate intracellular calcium spike following extracellular calcium stimulus","termid":"FYPO:0001463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased immediate intracellular calcium spike following extracellular calcium stimulus","synonyms":[{"name":"decreased immediate intracellular calcium spike following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"decreased immediate intracellular calcium spike following extracellular calcium stimulus during vegetative growth","type":"exact"},{"name":"reduced immediate intracellular calcium spike following extracellular calcium stimulus","type":"exact"}],"termid":"FYPO:0001465"}


id: GO:0051494
data:
  {"annotated_genes":["SJAG_01993","SJAG_02795","SJAG_02700","SJAG_01894","SJAG_03455","SJAG_00279","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79524,80555,76057,92666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[74791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[98600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[102681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of cytoskeleton organization","termid":"GO:0051493"},{"relation_name":"negatively_regulates","term_name":"cytoskeleton organization","termid":"GO:0007010"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_03048":null,"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"negative regulation of cytoskeleton organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cytoskeleton organization","type":"exact"},{"name":"down-regulation of cytoskeleton organization","type":"exact"},{"name":"downregulation of cytoskeleton organization","type":"exact"},{"name":"inhibition of cytoskeleton organization","type":"narrow"},{"name":"negative regulation of cytoskeleton organisation","type":"exact"},{"name":"negative regulation of cytoskeleton organization and biogenesis","type":"related"}],"termid":"GO:0051494","terms_by_termid":{"GO:0034316":null,"GO:0051016":null,"GO:1903500":null,"GO:2000432":null}}


id: GO:0099042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The first step in clathrin-dependent endocytosis: invagination of the plasma membrane to form a pit.","definition_xrefs":["GOC:dos","GOC:vw","PMID:21779028"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleation of clathrin-coated pit (obsolete GO:0099042)","termid":"GO:0099042"}


id: GO:0090628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a plant epidermal cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant epidermal cell fate specification","termid":"GO:0090628"}


id: PBO:0078101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 9","termid":"PBO:0078101"}


id: PBO:0055579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3015","termid":"PBO:0055579"}


id: MONDO:0700079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A breast carcinoma which is positive for expression of estrogen receptor (ER), progesterone receptor (PR), and is negative for expression of human epidermal growth factor receptor 2 (HER2).","direct_ancestors":[{"relation_name":"is_a","term_name":"progesterone-receptor positive breast cancer","termid":"MONDO:0000615"},{"relation_name":"is_a","term_name":"Her2-receptor negative breast cancer","termid":"MONDO:0000618"},{"relation_name":"is_a","term_name":"estrogen-receptor positive breast cancer","termid":"MONDO:0006512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"hormone receptor-positive breast cancer","secondary_identifiers":["MEDGEN:1825950","NCIT:C157056","UMLS:C5442556"],"synonyms":[{"name":"HR-positive HER2-negative breast cancer","type":"exact"},{"name":"hormone receptor positive breast cancer","type":"exact"}],"termid":"MONDO:0700079","xrefs":{"Monarch":{"xref_id":"0700079"}}}


id: PBO:0060169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal triglyceride transfer protein","termid":"PBO:0060169"}


id: GO:0071265
data:
  {"annotated_genes":["SJAG_00881","SJAG_01404","SJAG_03671","SJAG_00309","SJAG_02689","SJAG_02972","SJAG_03881","SJAG_03614","SJAG_02293","SJAG_00395"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65593,111400,68742,106312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[78220,78671,77263,80460,58760,79583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine, the L-enantiomer of (2S)-2-amino-4-(methylsulfanyl)butanoic acid.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methionine biosynthetic process","termid":"GO:0009086"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_00395":null,"SJAG_00881":null,"SJAG_01404":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_02972":null,"SJAG_03614":null,"SJAG_03671":null,"SJAG_03881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-methionine biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"L-methionine anabolism","type":"exact"},{"name":"L-methionine biosynthesis","type":"exact"},{"name":"L-methionine formation","type":"exact"},{"name":"L-methionine synthesis","type":"exact"}],"termid":"GO:0071265","terms_by_termid":{"GO:0019509":null,"GO:0071266":null}}


id: PBO:0063054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase domain containing associated with muscle regeneration 1","termid":"PBO:0063054"}


id: PBO:0043778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A4","termid":"PBO:0043778"}


id: MONDO:0008103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"noduli Cutanei, multiple, with urinary tract abnormalities","secondary_identifiers":["MEDGEN:371746","UMLS:C1834143","MESH:C563512","OMIM:163850"],"synonyms":[{"name":"noduli Cutanei, multiple, with urinary tract abnormalities","type":"exact"}],"termid":"MONDO:0008103","xrefs":{"Monarch":{"xref_id":"0008103"}}}


id: PBO:0060763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 7","termid":"PBO:0060763"}


id: GO:0071460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of cell-matrix adhesion.","definition_xrefs":["PMID:11425869","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cell-matrix adhesion","termid":"GO:0071460"}


id: PBO:0064492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit E","termid":"PBO:0064492"}


id: PR:O59674
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ort1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C29A3.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.11c","synonyms":[{"name":"Spom972h-ort1","type":"exact"}],"termid":"PR:O59674"}


id: GO:1904705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular smooth muscle cell proliferation.","definition_xrefs":["PMID:23246467","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell proliferation","termid":"GO:0048660"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell proliferation","termid":"GO:1990874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell proliferation","synonyms":[{"name":"regulation of VSMC proliferation","type":"exact"},{"name":"regulation of vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1904705"}


id: PBO:0089636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14","termid":"PBO:0089636"}


id: PBO:0110044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP3 pseudogene 1","termid":"PBO:0110044"}


id: GO:1903028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of opsonization.","definition_xrefs":["GO_REF:0000058","PMID:22333221","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"regulation of opsonization","termid":"GO:1903027"},{"relation_name":"positively_regulates","term_name":"opsonization","termid":"GO:0008228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of opsonization","synonyms":[{"name":"activation of opsonization","type":"narrow"},{"name":"up regulation of opsonization","type":"exact"},{"name":"up-regulation of opsonization","type":"exact"},{"name":"upregulation of opsonization","type":"exact"}],"termid":"GO:1903028"}


id: GO:0046845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of a set number of cells to each primary branch in an open tracheal system, prior to the onset of cell migration. This establishes different domains of cells within the tracheal placode.","definition_xrefs":["GOC:mtg_sensu","PMID:10684581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branched duct epithelial cell fate determination, open tracheal system","synonyms":[{"name":"branch cell fate determination","type":"broad"}],"termid":"GO:0046845"}


id: SO:0001459
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Clustered Palindromic Repeats interspersed with bacteriophage derived spacer sequences.","definition_xrefs":["RFAM:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direct_repeat","termid":"SO:0000314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRISPR","secondary_identifiers":["http:en.wikipedia.org/wiki/CRISPR"],"synonyms":[{"name":"CRISPR element","type":"exact"},{"name":"Clustered_Regularly_Interspaced_Short_Palindromic_Repeat","type":"exact"}],"termid":"SO:0001459"}


id: GO:0030410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 S-adenosyl-L-methionine(1+) = 3 S-methyl-5'-thioadenosine + 3 H+ + nicotianamine.","definition_xrefs":["RHEA:16481","EC:2.5.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nicotianamine synthase activity","secondary_identifiers":["KEGG_REACTION:R00075","MetaCyc:2.5.1.43-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-L-methionine 3-amino-3-carboxypropyltransferase activity","type":"related"}],"termid":"GO:0030410"}


id: FYPO:0003061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the two nuclei in a zygote formed by conjugation with cellular fusion undergo meiosis before karyogamy with nuclear fusion is completed.","definition_xrefs":["PMID:23755176","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"meiotic cell cycle in zygote with unfused nuclei","synonyms":[{"name":"haploid meiosis before karyogamy","type":"exact"},{"name":"twin haploid meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003061"}


id: GO:0100044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates cellular hyperosmotic salinity response.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular hyperosmotic salinity response by transcription from RNA polymerase II promoter (obsolete GO:0100044)","termid":"GO:0100044"}


id: PBO:0069601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 878, pseudogene","termid":"PBO:0069601"}


id: PBO:0081013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB46 antisense RNA 1","termid":"PBO:0081013"}


id: GO:1902937
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of inward rectifier potassium channel activity.","definition_xrefs":["GOC:bhm","GO_REF:0000088","PMID:16834334","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"inward rectifier potassium channel complex","termid":"GO:1902937"}


id: MONDO:0004788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that arises from the squamous epithelium of the cervix.","definition_xrefs":["NCIT:C6342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical benign neoplasm","termid":"MONDO:0000644"},{"relation_name":"is_a","term_name":"squamous papilloma","termid":"MONDO:0001825"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervix squamous papilloma","secondary_identifiers":["MEDGEN:237038","UMLS:C1336900","DOID:9445"],"synonyms":[{"name":"cervical squamous papilloma","type":"exact"},{"name":"cervix squamous papilloma","type":"exact"},{"name":"cervix uteri squamous papilloma","type":"exact"},{"name":"squamous papilloma of cervix","type":"exact"},{"name":"squamous papilloma of cervix uteri","type":"exact"},{"name":"squamous papilloma of the cervix","type":"exact"},{"name":"squamous papilloma of the cervix uteri","type":"exact"},{"name":"squamous papilloma of the uterine cervix","type":"exact"},{"name":"squamous papilloma of uterine cervix","type":"exact"},{"name":"uterine cervix squamous papilloma","type":"exact"}],"termid":"MONDO:0004788","xrefs":{"Monarch":{"xref_id":"0004788"}}}


id: PBO:0079513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine kinase 2","termid":"PBO:0079513"}


id: MOD:01380
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-tryptophan residue by a thioether bond to form 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide.","definition_xrefs":["PubMed:363352","PubMed:11805306","PubMed:18552824","PubMed:4865716","RESID:AA0451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide","synonyms":[{"name":"2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide","type":"exact"},{"name":"2-((2R)-2-amino-2carboxyethyl)sulfinyl-3-((2S)-2-amino-2-carboxyethyl)-1H-indole","type":"exact"},{"name":"6'-hydroxy-S-oxo-tryptathionine","type":"exact"},{"name":"CROSSLNK 2'-cysteinyl-6'-hydroxytryptophan sulfoxide (Trp-Cys)","type":"exact"}],"termid":"MOD:01380"}


id: PBO:0117053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO7B antisense RNA 1","termid":"PBO:0117053"}


id: PBO:0046207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin B pseudogene 4","termid":"PBO:0046207"}


id: PBO:0047787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4 like 4","termid":"PBO:0047787"}


id: MONDO:0007162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asymmetric short stature syndrome","secondary_identifiers":["MEDGEN:354753","OMIM:108450","UMLS:C1862458","MESH:C566248"],"synonyms":[{"name":"asymmetric short stature syndrome","type":"exact"}],"termid":"MONDO:0007162","xrefs":{"Monarch":{"xref_id":"0007162"}}}


id: SO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One or more contigs that have been ordered and oriented using end-read information. Contains gaps that are filled with N's.","definition_xrefs":["SO:ls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial_genomic_sequence_assembly","termid":"SO:0001876"},{"relation_name":"part_of","term_name":"ultracontig","termid":"SO:0000719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supercontig","synonyms":[{"name":"scaffold","type":"related"}],"termid":"SO:0000148"}


id: PBO:0065661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type K","termid":"PBO:0065661"}


id: _global:has_characteristic
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Inverse of characteristic_of","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_characteristic","secondary_identifiers":["RO:0000053"],"termid":"_global:has_characteristic"}


id: PBO:0045492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Down syndrome critical region 10","termid":"PBO:0045492"}


id: PBO:0017711
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GRF7","termid":"PBO:0017711"}


id: PBO:0090204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP215 microtubule plus end tracking polymerase Alp14","termid":"PBO:0090204"}


id: PBO:0074679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63","termid":"PBO:0074679"}


id: MONDO:0015039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly with cerebellar hypoplasia type F (LCHf) is a severe form of lissencephaly with cerebellar hypoplasia, characterized by a microcephaly of at least - 3 SD and a thick cortex associated with complete absence of the corpus callosum.","definition_xrefs":["Orphanet:100016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly with cerebellar hypoplasia","termid":"MONDO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly with cerebellar hypoplasia type F","secondary_identifiers":["GARD:19736","icd11.foundation:468664200","UMLS:C4274989","SCTID:715822007","MEDGEN:902647"],"termid":"MONDO:0015039","xrefs":{"Monarch":{"xref_id":"0015039"}}}


id: GO:0035932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of aldosterone into the circulatory system. Aldosterone is a pregnane-based steroid hormone produced by the outer-section (zona glomerulosa) of the adrenal cortex in the adrenal gland, and acts on the distal tubules and collecting ducts of the kidney to cause the conservation of sodium, secretion of potassium, increased water retention, and increased blood pressure. The overall effect of aldosterone is to increase reabsorption of ions and water in the kidney.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"mineralocorticoid secretion","termid":"GO:0035931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"aldosterone secretion","termid":"GO:0035932"}


id: GO:0004803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transposition of transposable elements or transposons. Transposases are involved in recombination required for transposition and are site-specific for the transposon/transposable element.","definition_xrefs":["GOC:bm","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"transposase activity","secondary_identifiers":["GO:0004804"],"synonyms":[{"name":"P-element encoded transposase activity","type":"narrow"}],"termid":"GO:0004803"}


id: GO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A nucleolar fragmentation process that gives rise to multiple rounded structures and that occurs in conjunction with increasing age in dividing cells.","definition_xrefs":["GOC:jh","PMID:9891807"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar fragmentation involved in replicative aging (obsolete GO:0001303)","synonyms":[{"name":"nucleolar fragmentation during replicative ageing","type":"related"},{"name":"nucleolar fragmentation during replicative aging","type":"related"}],"termid":"GO:0001303"}


id: GO:0097324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of melanocytes from one site to another, often during the development of a multicellular organism. A melanocyte is a pigment cell derived from the neural crest. It contains melanin-filled pigment granules, which give a brown to black appearance.","definition_xrefs":["GOC:uh","PMID:22637532","CL:0000148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melanocyte migration","termid":"GO:0097324"}


id: PBO:0047808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXL2 neighbor","termid":"PBO:0047808"}


id: GO:0021812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The changes in adhesion between neuronal cells and glial cells as a component of the process of cerebral cortex glial-mediated radial cell migration.","definition_xrefs":["GOC:jid","GO_REF:0000021","PMID:12626695","GOC:dgh","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"cerebral cortex radial glia-guided migration","termid":"GO:0021801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"neuronal-glial interaction involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"neuronal-glial interaction involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021812"}


id: PBO:0033828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin-protein ligase Bpl1 (predicted)","termid":"PBO:0033828"}


id: PATO:0000849
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000849 absolute auditory ability (obsolete PATO:0000849)","termid":"PATO:0000849"}


id: PBO:0066509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFX5 antisense RNA 1","termid":"PBO:0066509"}


id: PBO:0044802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 103A","termid":"PBO:0044802"}


id: PBO:0090362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein, conserved in yeast and apicomplexa","termid":"PBO:0090362"}


id: PR:Q9P7S7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar protein 58 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00338","PANTHER:PTHR10894:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 58 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.06","secondary_identifiers":["UniProtKB:Q9P7S7"],"synonyms":[{"name":"Spom972h-NOP58","type":"exact"}],"termid":"PR:Q9P7S7"}


id: FYPO:0005504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which galactose-specific flocculation does not occur. Galactose-specific flocculation is the non-sexual aggregation of single cells, mediated by the binding of cell wall proteins on one cell to galactose residues on the other.","definition_xrefs":["GO:0036349","PomBase:mah","PMID:23236291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion","termid":"FYPO:0001872"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished galactose-specific flocculation","synonyms":[{"name":"abolished flocculation","type":"broad"},{"name":"galactose-specific flocculation abolished","type":"exact"}],"termid":"FYPO:0005504"}


id: PBO:0052922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-5","termid":"PBO:0052922"}


id: PBO:0116281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic spindle midzone-localized microtubule bundling protein; microtubule-associated protein (MAP) family member; required for anaphase spindle elongation and stabilization; selectively increases the lifetime of antiparallel microtubule overlaps; undergoes cell cycle-regulated degradation by anaphase promoting complex; potential Cdc28p substrate; relative distribution to microtubules decreases upon DNA replication stress","termid":"PBO:0116281"}


id: PBO:0030647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pH_of_growth_medium","termid":"PBO:0030647"}


id: GO:0001713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process that results in a cell becoming capable of differentiating autonomously into an ectoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"ectodermal cell fate commitment","termid":"GO:0001712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal cell fate determination","synonyms":[{"name":"ectoderm cell fate determination","type":"exact"}],"termid":"GO:0001713"}


id: PBO:0079279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTK protein kinase","termid":"PBO:0079279"}


id: PR:O42956
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- art1 gene.","definition_xrefs":["UniProtKB:O42956","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.08c","synonyms":[{"name":"Spom972h-art1","type":"exact"}],"termid":"PR:O42956"}


id: PBO:0030981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere","termid":"PBO:0030981"}


id: GO:0052005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of the ethylene-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"},{"relation_name":"is_a","term_name":"symbiont-mediated modulation of host ethylene-mediated defense response","termid":"GO:0052084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host ethylene-mediated defense response","secondary_identifiers":["GO:0052254","GO:0052268","GO:0052070"],"synonyms":[{"name":"down regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"down-regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"downregulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"inhibition by symbiont of host ethylene-mediated defense response","type":"narrow"},{"name":"negative regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by symbiont of defense-related host ethylene-mediated signal transduction pathway","type":"broad"},{"name":"negative regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"suppression by organism of host ethylene-mediated defense response","type":"exact"},{"name":"suppression by symbiont of host ethylene-mediated defense response","type":"exact"}],"termid":"GO:0052005"}


id: MONDO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pigmented nodular adrenocortical disease (obsolete MONDO:0000084)","termid":"MONDO:0000084","xrefs":{"Monarch":{"xref_id":"0000084"}}}


id: GO:0004185
data:
  {"annotated_genes":["SJAG_01868","SJAG_04819","SJAG_00975"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75884,76589,79827],"is_not":false,"summary":null,"term":"GO:0004185"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single C-terminal amino acid residue from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","direct_ancestors":[{"relation_name":"is_a","term_name":"carboxypeptidase activity","termid":"GO:0004180"},{"relation_name":"is_a","term_name":"serine-type exopeptidase activity","termid":"GO:0070008"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00975":null,"SJAG_01868":null,"SJAG_04819":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0016787","GO:0008233"],"is_obsolete":false,"name":"serine-type carboxypeptidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.4.16.-","Reactome:R-HSA-158251"],"synonyms":[{"name":"serine carboxypeptidase activity","type":"exact"}],"termid":"GO:0004185","terms_by_termid":{"GO:0004185":null}}


id: PBO:0034039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_component","termid":"PBO:0034039"}


id: PBO:0075821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SS nuclear autoantigen 1","termid":"PBO:0075821"}


id: PBO:0054276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1666","termid":"PBO:0054276"}


id: GO:1901905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tamsulosin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tamsulosin","termid":"GO:1901905"}


id: GO:0050244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + H+ + O2 + pyruvate = acetyl-CoA + CO2 + H2O2.","definition_xrefs":["RHEA:21912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyruvate oxidase (CoA-acetylating) activity","secondary_identifiers":["KEGG_REACTION:R00211","MetaCyc:PYRUVATE-OXIDASE-COA-ACETYLATING-RXN","EC:1.2.3.6"],"synonyms":[{"name":"pyruvate:oxygen 2-oxidoreductase (CoA-acetylating)","type":"related"}],"termid":"GO:0050244"}


id: PBO:0027290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione_peroxidase_activity","termid":"PBO:0027290"}


id: GO:0045469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or prevents the correct R8 cell spacing pattern in a compound eye.","definition_xrefs":["PMID:11880339","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R8 cell spacing in compound eye","termid":"GO:0045468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of R8 cell spacing in compound eye","synonyms":[{"name":"down regulation of R8 spacing","type":"exact"},{"name":"down-regulation of R8 spacing","type":"exact"},{"name":"downregulation of R8 spacing","type":"exact"},{"name":"inhibition of R8 spacing","type":"narrow"}],"termid":"GO:0045469"}


id: GO:1900317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltopentaose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maltopentaose transport","termid":"GO:1900315"},{"relation_name":"is_a","term_name":"positive regulation of pentasaccharide transport","termid":"GO:1900362"},{"relation_name":"positively_regulates","term_name":"maltopentaose transport","termid":"GO:2001101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of maltopentaose transport","synonyms":[{"name":"activation of maltopentaose transport","type":"narrow"},{"name":"up regulation of maltopentaose transport","type":"exact"},{"name":"up-regulation of maltopentaose transport","type":"exact"},{"name":"upregulation of maltopentaose transport","type":"exact"}],"termid":"GO:1900317"}


id: PBO:0039955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2","termid":"PBO:0039955"}


id: PBO:0042021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 78","termid":"PBO:0042021"}


id: PBO:0113019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Benzil oxidoreductase with preference for NADPH; localizes to the cytoplasm; sequence similarity with short-chain dehydrogenase/reductases; putative paralog of IRC24","termid":"PBO:0113019"}


id: MONDO:1012729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cardiomyopathy characterized by death under stressful conditions that occurs in pigs due to a mutation in the DMD gene.","definition_xrefs":["PMID:22691118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, non-human animal","termid":"MONDO:1010196"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porcine stress syndrome, DMD-related, pig","secondary_identifiers":["OMIA:001685-9823"],"synonyms":[{"name":"stress syndrome, DMD-related, pig","type":"exact"}],"termid":"MONDO:1012729","xrefs":{"Monarch":{"xref_id":"1012729"}}}


id: GO:0080078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a tricaffeoyl spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tricaffeoyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity","termid":"GO:0080078"}


id: MONDO:1012363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy of the diaphragmatic muscles, non-human animal","termid":"MONDO:1011797"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy of the diaphragmatic muscles, cattle","secondary_identifiers":["OMIA:001319-9913"],"termid":"MONDO:1012363","xrefs":{"Monarch":{"xref_id":"1012363"}}}


id: GO:1900748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor signaling pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of vascular endothelial growth factor signaling pathway","termid":"GO:1900746"},{"relation_name":"positively_regulates","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of vascular endothelial growth factor signaling pathway","synonyms":[{"name":"activation of VEGF signaling","type":"exact"},{"name":"activation of VEGF-activated signaling pathway","type":"exact"},{"name":"activation of vascular endothelial growth factor signaling pathway","type":"narrow"},{"name":"activation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"positive regulation of VEGF signaling","type":"exact"},{"name":"positive regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"positive regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"up regulation of VEGF signaling","type":"exact"},{"name":"up regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"up regulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"up regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"up-regulation of VEGF signaling","type":"exact"},{"name":"up-regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"up-regulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"up-regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"upregulation of VEGF signaling","type":"exact"},{"name":"upregulation of VEGF-activated signaling pathway","type":"exact"},{"name":"upregulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"upregulation of vascular endothelial growth factor signalling pathway","type":"exact"}],"termid":"GO:1900748"}


id: PBO:0058464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5193","termid":"PBO:0058464"}


id: PBO:0076165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1A member 1","termid":"PBO:0076165"}


id: PBO:0060528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 1","termid":"PBO:0060528"}


id: PBO:0058488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5682","termid":"PBO:0058488"}


id: PBO:0087649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hat1p-Hat2p histone acetyltransferase complex; required for high affinity binding of the complex to free histone H4, thereby enhancing Hat1p activity; similar to human RbAp46 and 48; has a role in telomeric silencing","termid":"PBO:0087649"}


id: PBO:0065279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich coiled-coil 2C","termid":"PBO:0065279"}


id: MONDO:0007867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 2","secondary_identifiers":["DOID:0080080","ICD9:703.8","SCTID:66270006","MESH:C537260","OMIM:149300","MEDGEN:75593","UMLS:C0266000"],"synonyms":[{"name":"Koilonychia with leukonychia","type":"related"},{"name":"Koilonychia, hereditary","type":"related"},{"name":"NDNC2","type":"related"},{"name":"congenital koilonychia","type":"related"},{"name":"familial koilonychia","type":"related"},{"name":"hereditary koilonychia","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 2","type":"related"},{"name":"nonsyndromic congenital nail disorder type 2","type":"exact"},{"name":"spoon nails","type":"related"}],"termid":"MONDO:0007867","xrefs":{"Monarch":{"xref_id":"0007867"}}}


id: GO:0016541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Intervening protein sequence excised from a protein precursor in protein splicing; inteins catalyze their own excision and many also possess endonuclease activity.","definition_xrefs":["PMID:8165123","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intein (obsolete GO:0016541)","synonyms":[{"name":"intein","type":"exact"}],"termid":"GO:0016541"}


id: PBO:0067485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 619, pseudogene","termid":"PBO:0067485"}


id: GO:0033516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine from other compounds, including homoserine, via the intermediates O-phospho-L-homoserine and cystathionine.","definition_xrefs":["GOC:mah","MetaCyc:PWY-702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine biosynthetic process from L-homoserine via cystathionine","termid":"GO:0019279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-methionine biosynthetic process from homoserine via O-phospho-L-homoserine and cystathionine","synonyms":[{"name":"L-methionine anabolism from homoserine via O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"L-methionine formation from homoserine via O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"L-methionine synthesis from homoserine via O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"methionine biosynthetic process from homoserine via O-phospho-L-homoserine and cystathionine","type":"exact"}],"termid":"GO:0033516"}


id: FYPO:0003093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which small RNA molecules physically associated with the Argonaute protein (Ago1) are longer than normal.","definition_xrefs":["PomBase:mah","PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"increased Argonaute-associated RNA length","synonyms":[{"name":"increased Argonaute-associated priRNA length","type":"narrow"},{"name":"increased Argonaute-associated siRNA length","type":"narrow"},{"name":"increased length of Ago1-associated RNA","type":"narrow"},{"name":"increased length of Argonaute-associated RNA","type":"exact"},{"name":"increased length of Argonaute-associated small RNA","type":"exact"}],"termid":"FYPO:0003093"}


id: MONDO:0015187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare inflammatory bowel disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare inflammatory bowel disease (obsolete MONDO:0015187)","secondary_identifiers":["Orphanet:104012"],"synonyms":[{"name":"rare inflammatory bowel disease","type":"exact"}],"termid":"MONDO:0015187","xrefs":{"Monarch":{"xref_id":"0015187"}}}


id: GO:1903922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein processing in phagocytic vesicle.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:23325791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein processing","termid":"GO:0010955"},{"relation_name":"is_a","term_name":"regulation of protein processing in phagocytic vesicle","termid":"GO:1903921"},{"relation_name":"negatively_regulates","term_name":"protein processing in phagocytic vesicle","termid":"GO:1900756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"negative regulation of protein processing in phagocytic vesicle","synonyms":[{"name":"down regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"down regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"down regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"down regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"down regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"down regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"down regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"down regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"down regulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"down regulation of protein processing in phagosome","type":"exact"},{"name":"down-regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"down-regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"down-regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"down-regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"down-regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"down-regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"down-regulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein processing in phagosome","type":"exact"},{"name":"downregulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"downregulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"downregulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"downregulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"downregulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"downregulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"downregulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"downregulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"downregulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"downregulation of protein processing in phagosome","type":"exact"},{"name":"inhibition of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"inhibition of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"inhibition of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein maturation by peptide bond cleavage in phagosome","type":"narrow"},{"name":"inhibition of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein maturation by peptide bond hydrolysis in phagosome","type":"narrow"},{"name":"inhibition of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"inhibition of protein maturation by proteolysis in phagosome","type":"related"},{"name":"inhibition of protein processing in phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein processing in phagosome","type":"narrow"},{"name":"negative regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"negative regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"negative regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"negative regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"negative regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"negative regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"negative regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"negative regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"negative regulation of protein processing in phagosome","type":"exact"}],"termid":"GO:1903922"}


id: GO:1904004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sebum secreting cell proliferation.","definition_xrefs":["PMID:16901790","GO_REF:0000058","GOC:hjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of sebum secreting cell proliferation","termid":"GO:1904002"},{"relation_name":"positively_regulates","term_name":"sebum secreting cell proliferation","termid":"GO:1990654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sebum secreting cell proliferation","synonyms":[{"name":"activation of sebocyte proliferation","type":"related"},{"name":"activation of sebum secreting cell proliferation","type":"narrow"},{"name":"positive regulation of sebocyte proliferation","type":"related"},{"name":"up regulation of sebocyte proliferation","type":"related"},{"name":"up regulation of sebum secreting cell proliferation","type":"exact"},{"name":"up-regulation of sebocyte proliferation","type":"related"},{"name":"up-regulation of sebum secreting cell proliferation","type":"exact"},{"name":"upregulation of sebocyte proliferation","type":"related"},{"name":"upregulation of sebum secreting cell proliferation","type":"exact"}],"termid":"GO:1904004"}


id: PBO:0068795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 32, pseudogene","termid":"PBO:0068795"}


id: PBO:0083977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosidase II beta subunit, forms a complex with alpha subunit Rot2p; involved in removal of two glucose residues from N-linked glycans during glycoprotein biogenesis in the ER; relocalizes from ER to cytoplasm upon DNA replication stress","termid":"PBO:0083977"}


id: SO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet consisting of two H-bonds in which: the main-chain NH of residue(i) is H-bonded to the main-chain CO of residue(i+5), the main-chain CO of residue i is H-bonded to the main-chain NH of residue(i+4), these loops have an RL nest at residues i+3 and i+4.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_bulge_loop","termid":"SO:0001108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge_loop_six","secondary_identifiers":["BS:00211"],"synonyms":[{"name":"beta bulge loop six","type":"exact"}],"termid":"SO:0001110"}


id: MONDO:0012108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spondyloepimetaphyseal dysplasia characterized by disproportionate early-onset dwarfism, bowing of the lower limbs, short, wide and stocky long bones with severe epiphyseal and metaphyseal changes, lumbar lordosis, hypoplastic iliac bones, flat ovoid vertebral bodies and normal hands.","definition_xrefs":["Orphanet:156728"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, matrilin-3 type","secondary_identifiers":["UMLS:C1837481","SCTID:719166003","icd11.foundation:1983063881","MEDGEN:325181","MESH:C563869","OMIM:608728","GARD:10611"],"synonyms":[{"name":"SEMD MATN3-related","type":"related"},{"name":"SEMD, MATN3-related","type":"exact"},{"name":"SEMD, matrilin-3 type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia matrilin-3 related","type":"related"},{"name":"spondyloepimetaphyseal dysplasia matrilin-3 type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Borochowitz-Cormier-Daire type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, matrilin-3 related","type":"related"}],"termid":"MONDO:0012108","xrefs":{"Monarch":{"xref_id":"0012108"}}}


id: SO:0000645
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The reverse complement of the primary transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense_primary_transcript","synonyms":[{"name":"antisense primary transcript","type":"exact"}],"termid":"SO:0000645"}


id: PBO:0083659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis; subunit of U3-containing 90S preribosome processome complex involved in small ribosomal subunit assembly; stimulates Bms1p GTPase and U3 binding activity; similar to RNA cyclase-like proteins but no cyclase activity detected","termid":"PBO:0083659"}


id: GO:0034497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the phagophore assembly site (PAS).","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"autophagosome assembly","termid":"GO:0000045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0044085","GO:0051179"],"is_obsolete":false,"name":"protein localization to phagophore assembly site","synonyms":[{"name":"protein localisation to phagophore assembly site","type":"exact"},{"name":"protein localization to PAS","type":"exact"},{"name":"protein localization to pre-autophagosomal structure","type":"narrow"}],"termid":"GO:0034497"}


id: MONDO:0005633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute disseminated encephalomyelitis (obsolete MONDO:0005633)","termid":"MONDO:0005633","xrefs":{"Monarch":{"xref_id":"0005633"}}}


id: GO:0033940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-beta-D-xylosyl links in some glucuronoarabinoxylans.","definition_xrefs":["EC:3.2.1.136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"glucuronoarabinoxylan endo-1,4-beta-xylanase activity","secondary_identifiers":["MetaCyc:3.2.1.136-RXN"],"synonyms":[{"name":"endoarabinoxylanase activity","type":"related"},{"name":"feraxan endoxylanase activity","type":"related"},{"name":"feraxanase activity","type":"related"},{"name":"glucuronoarabinoxylan 1,4-beta-D-xylanohydrolase activity","type":"related"},{"name":"glucuronoxylan xylanohydrolase activity","type":"related"},{"name":"glucuronoxylan xylohydrolase activity","type":"related"},{"name":"glucuronoxylanase activity","type":"related"}],"termid":"GO:0033940"}


id: GO:0034878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxyisonicotinate + acceptor + H2O = citrazinate + reduced acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxyisonicotinate dehydrogenase activity (obsolete GO:0034878)","termid":"GO:0034878"}


id: MONDO:0018612
data:
  {"annotated_genes":["SJAG_01926","SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026731"},{"annotations":[86043,86042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010134"}]},"cv_name":"mondo","definition":"A thyroid hormone deficiency present from birth.","definition_xrefs":["Orphanet:442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism","termid":"MONDO:0005420"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01926":null,"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"is_obsolete":false,"name":"congenital hypothyroidism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:759.89","MEDGEN:41344","MESH:D003409","NANDO:2200333","DOID:0050328","icd11.foundation:602450215","ICD9:243","ICD9:269.3","NCIT:C26734","SCTID:217710005","UMLS:C0010308","GARD:1487","MedDRA:10010510","SCTID:190268003"],"synonyms":[{"name":"congenital goiter","type":"related"},{"name":"congenital goitre","type":"related"},{"name":"congenital hypothyroidism","type":"exact"},{"name":"congenital hypothyroidism not due to iodine deficiency","type":"related"},{"name":"congenital iodine deficiency syndrome","type":"exact"},{"name":"cretinism","type":"related"},{"name":"fetal iodine deficiency syndrome","type":"related"},{"name":"foetal iodine deficiency syndrome","type":"related"},{"name":"infantile hypothyroidism","type":"related"}],"termid":"MONDO:0018612","terms_by_termid":{"MONDO:0010134":null,"MONDO:0026731":null},"xrefs":{"Monarch":{"xref_id":"0018612"}}}


id: GO:0050758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the enzyme thymidylate synthase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of thymidylate synthase biosynthetic process (obsolete GO:0050758)","synonyms":[{"name":"regulation of thymidylate synthase anabolism","type":"exact"},{"name":"regulation of thymidylate synthase biosynthesis","type":"exact"},{"name":"regulation of thymidylate synthase formation","type":"exact"},{"name":"regulation of thymidylate synthase synthesis","type":"exact"}],"termid":"GO:0050758"}


id: PBO:0071378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 1","termid":"PBO:0071378"}


id: PBO:0083201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene RPC34/YNR003C","termid":"PBO:0083201"}


id: GO:1904682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3-methylcholanthrene stimulus.","definition_xrefs":["PMID:9224771","GOC:TermGenie","GO_REF:0000071","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to polycyclic arene","termid":"GO:1903166"},{"relation_name":"is_a","term_name":"response to 3-methylcholanthrene","termid":"GO:1904681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 3-methylcholanthrene","termid":"GO:1904682"}


id: PBO:0069709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 989, pseudogene","termid":"PBO:0069709"}


id: PBO:0063483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase kinase 1 pseudogene 1","termid":"PBO:0063483"}


id: PBO:0114092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase membrane subunit, Atp8","termid":"PBO:0114092"}


id: PBO:0081458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 324B","termid":"PBO:0081458"}


id: MONDO:0054736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic variegated aneuploidy syndrome 3","secondary_identifiers":["DOID:0080689","OMIM:617598","MEDGEN:1616382","GARD:16240","UMLS:C4539839"],"synonyms":[{"name":"MOSAIC variegated aneuploidy syndrome 3","type":"related"},{"name":"MVA3","type":"related"}],"termid":"MONDO:0054736","xrefs":{"Monarch":{"xref_id":"0054736"}}}


id: FYPO:0001660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"},{"relation_name":"is_a","term_name":"altered cellular cAMP level","termid":"FYPO:0001659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular cAMP level","synonyms":[{"name":"decreased cellular cAMP accumulation","type":"related"},{"name":"decreased cellular cyclic AMP level","type":"exact"},{"name":"reduced cellular cAMP level","type":"exact"}],"termid":"FYPO:0001660"}


id: GO:0034421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acetyl group to one or more amino acids in a protein, occurring after the protein has been completely translated and released from the ribosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"},{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-translational protein acetylation","synonyms":[{"name":"post-translational protein amino acid acetylation","type":"exact"},{"name":"posttranslational protein amino acid acetylation","type":"exact"}],"termid":"GO:0034421"}


id: MOD:00322
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to tele-methyl-L-histidine.","definition_xrefs":["PubMed:8076","PubMed:8645219","PubMed:10601317","PubMed:11474090","PubMed:11875433","RESID:AA0317","PubMed:6692818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated L-histidine","termid":"MOD:00724"},{"relation_name":"is_a","term_name":"monomethylated L-histidine","termid":"MOD:02038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"1'-methyl-L-histidine","synonyms":[{"name":"(S)-2-amino-3-(1-methyl-1H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"1'-methyl-L-histidine","type":"exact"},{"name":"3-methylhistidine","type":"related"},{"name":"4-methyl-histidine","type":"related"},{"name":"MOD_RES Tele-methylhistidine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N(epsilon)-methylhistidine","type":"exact"},{"name":"N(tau)-methylhistidine","type":"exact"},{"name":"NteleMeHis","type":"exact"},{"name":"tele-methylated L-histidine","type":"exact"},{"name":"tele-methylhistidine","type":"exact"}],"termid":"MOD:00322"}


id: PBO:0073362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family F member 2","termid":"PBO:0073362"}


id: GO:0046983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"protein dimerization activity","termid":"GO:0046983"}


id: MONDO:0054560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anauxetic dysplasia","termid":"MONDO:0011773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"anauxetic dysplasia 1","secondary_identifiers":["DOID:0050640","MEDGEN:1638106","OMIM:607095","UMLS:C4551965"],"synonyms":[{"name":"ANXD1","type":"related"},{"name":"anauxetic dysplasia","type":"related"},{"name":"anauxetic dysplasia 1","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, anauxetic type","type":"related"},{"name":"spondylometaepiphyseal dysplasia, Menger type","type":"related"},{"name":"spondylometaepiphyseal dysplasia, anauxetic type","type":"related"}],"termid":"MONDO:0054560","xrefs":{"Monarch":{"xref_id":"0054560"}}}


id: PBO:0049498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 5, pseudogene","termid":"PBO:0049498"}


id: PBO:0060996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHL repeat containing E3 ubiquitin protein ligase 1","termid":"PBO:0060996"}


id: GO:0097160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polychlorinated biphenyl (PCB), a biphenyl compound containing between 2 and 10 chlorine atoms attached to the two benzene rings.","definition_xrefs":["PMID:7583672","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"polychlorinated biphenyl binding","synonyms":[{"name":"PCB binding","type":"exact"},{"name":"polychlorobiphenyl binding","type":"exact"}],"termid":"GO:0097160"}


id: PBO:0051349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-38 (pseudogene)","termid":"PBO:0051349"}


id: GO:0010303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic linkages in alpha- and beta-limit dextrins of amylopectin and glycogen, and in amylopectin and pullulan.","definition_xrefs":["EC:3.2.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"limit dextrinase activity","secondary_identifiers":["MetaCyc:3.2.1.142-RXN"],"synonyms":[{"name":"R-enzyme","type":"related"},{"name":"amylopectin-1,6-glucosidase activity","type":"related"},{"name":"dextrin alpha-1,6-glucanohydrolase activity","type":"related"}],"termid":"GO:0010303"}


id: MONDO:0100178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing atopic dermatitis.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatitis, atopic, susceptibility to","secondary_identifiers":["OMIMPS:603165"],"termid":"MONDO:0100178","xrefs":{"Monarch":{"xref_id":"0100178"}}}


id: PBO:0070171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 85 pseudogene","termid":"PBO:0070171"}


id: GO:0010986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of lipoprotein particle clearance. Lipoprotein particle clearance is the process in which a lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"}


id: PBO:0064316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 5","termid":"PBO:0064316"}


id: GO:0047850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: meso-2,6-diaminopimelate + H2O + NADP+ = L-2-amino-6-oxopimelate + H+ + NADPH + NH4.","definition_xrefs":["RHEA:13561","EC:1.4.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"diaminopimelate dehydrogenase activity","secondary_identifiers":["MetaCyc:DIAMINOPIMELATE-DEHYDROGENASE-RXN","KEGG_REACTION:R02755"],"synonyms":[{"name":"meso-2,6-diaminoheptanedioate:NADP+ oxidoreductase (deaminating)","type":"related"},{"name":"meso-alpha,epsilon-diaminopimelate dehydrogenase activity","type":"related"},{"name":"meso-diaminopimelate D-dehydrogenase activity","type":"related"},{"name":"meso-diaminopimelate dehydrogenase activity","type":"related"}],"termid":"GO:0047850"}


id: PR:G2TRL2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wip1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-fold domain-containing protein new1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.15","synonyms":[{"name":"Spom972h-wip1","type":"exact"}],"termid":"PR:G2TRL2"}


id: PBO:0031739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mating_type_switching","termid":"PBO:0031739"}


id: MONDO:0016508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare non surgically correctable form of primary aldosteronism (obsolete MONDO:0016508)","secondary_identifiers":["Orphanet:231641"],"termid":"MONDO:0016508","xrefs":{"Monarch":{"xref_id":"0016508"}}}


id: MONDO:0020238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inherited vitreous-retinal disease (obsolete MONDO:0020238)","secondary_identifiers":["Orphanet:98657"],"synonyms":[{"name":"genetic vitreoretinal disease","type":"exact"},{"name":"genetic vitreous-retinal disease","type":"exact"}],"termid":"MONDO:0020238","xrefs":{"Monarch":{"xref_id":"0020238"}}}


id: PBO:0018230
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae BTS1","termid":"PBO:0018230"}


id: SO:0001566
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within a regulatory region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:regulatory_region_variant","type":"exact"},{"name":"VEP:regulatory_region_variant","type":"exact"},{"name":"regulatory region variant","type":"exact"},{"name":"regulatory_region_","type":"exact"},{"name":"snpEff:REGULATION","type":"exact"}],"termid":"SO:0001566"}


id: PBO:0085006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of glucose-induced cAMP signaling; directly activates the GTPase activity of the heterotrimeric G protein alpha subunit Gpa2p","termid":"PBO:0085006"}


id: PBO:0070244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 185 pseudogene","termid":"PBO:0070244"}


id: PBO:0005572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Ekc1 (predicted)","termid":"PBO:0005572"}


id: GO:0035805
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized extracellular matrix that surrounds the plasma membrane of the ovum of animals. The egg coat provides structural support and can play an essential role in oogenesis, fertilization and early development.","definition_xrefs":["PMID:16944418","PMID:17163408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specialized extracellular matrix","termid":"GO:0140047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"egg coat","synonyms":[{"name":"vitelline membrane","type":"narrow"},{"name":"zona pellucida","type":"narrow"}],"termid":"GO:0035805"}


id: MONDO:0006509
data:
  {"annotated_genes":["SJAG_01144"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"}]},"cv_name":"mondo","definition":"A malignant epithelial neoplasm characterized by a papillary growth pattern. A papillary carcinoma may be composed of glandular cells (papillary adenocarcinoma), squamous cells (papillary squamous cell carcinoma), or transitional cells (papillary transitional cell carcinoma). Bladder carcinoma is a representative example of papillary transitional cell carcinoma.","definition_xrefs":["NCIT:C2927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"papillary epithelial neoplasm","termid":"MONDO:0021096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01144":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:3113","EFO:1000646","ICDO:8050/3","MEDGEN:40105","MESH:D002291","UMLS:C0007133"],"synonyms":[{"name":"papillary carcinoma","type":"exact"},{"name":"papillary carcinoma (morphologic abnormality)","type":"exact"},{"name":"papillary carcinoma NOS (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006509","terms_by_termid":{"MONDO:0003789":null},"xrefs":{"Monarch":{"xref_id":"0006509"}}}


id: PATO:0001416
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration which has regular start and/or end times.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regular duration","termid":"PATO:0001416"}


id: GO:1990349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of substances between cells via gap junctions. A gap junction is a fine cytoplasmic channel, found in animal cells, that connects the cytoplasm of one cell to that of an adjacent cell, allowing ions and other molecules to pass freely between the two cells.","definition_xrefs":["Wikipedia:Gap_junction","PMID:14506308","GOC:hjd","PMID:23261543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intercellular transport","termid":"GO:0010496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gap junction-mediated intercellular transport","termid":"GO:1990349"}


id: PBO:0042326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD46 molecule pseudogene 1","termid":"PBO:0042326"}


id: GO:0050046
data:
  {"annotated_genes":["SJAG_00717","SJAG_03509"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90002,107842],"is_not":false,"summary":null,"term":"GO:0050046"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a delta(7)-sterol + 2 ferrocytochrome b5 + O2 + 2 H+ -> a delta(5,7)-sterol + 2 ferricytochrome b5 + 2 H2O.","definition_xrefs":["RHEA:54320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol desaturase activity","termid":"GO:0070704"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_03509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"delta7-sterol 5(6)-desaturase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.14.19.20","MetaCyc:RXN-16378"],"synonyms":[{"name":"5-DES","type":"related"},{"name":"delta7-sterol 5-desaturase activity","type":"related"},{"name":"delta7-sterol delta5-dehydrogenase activity","type":"related"},{"name":"delta7-sterol-C5(6)-desaturase activity","type":"related"},{"name":"lathosterol 5-desaturase activity","type":"related"},{"name":"lathosterol oxidase activity","type":"exact"}],"termid":"GO:0050046","terms_by_termid":{"GO:0050046":null}}


id: MONDO:0004900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vestibular disorder","termid":"MONDO:0002643"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral vertigo","secondary_identifiers":["ICD9:386.19","MEDGEN:102334","DOID:9847","UMLS:C0155501","ICD9:386.1","ICD9:386.10","SCTID:50438001"],"termid":"MONDO:0004900","xrefs":{"Monarch":{"xref_id":"0004900"}}}


id: PBO:0042823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 2","termid":"PBO:0042823"}


id: GO:0099572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins within and adjacent to the postsynaptic membrane. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.","definition_xrefs":["PMID:22046028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle","termid":"GO:0043226"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization","termid":"GO:0099572"}


id: PBO:0066376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDM1 pseudogene 3","termid":"PBO:0066376"}


id: SO:0001457
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region defined by a set of transcribed sequences from the same gene or expressed pseudogene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"reagent","termid":"SO:0000695"},{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_cluster","synonyms":[{"name":"transcribed cluster","type":"exact"},{"name":"unigene cluster","type":"related"}],"termid":"SO:0001457"}


id: MONDO:0017940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2 due to KIF5A mutation is a rare form of axonal peripheral sensorimotor neuropathy characterized by classical CMT2 signs and symptoms (progressive weakness and atrophy of distal limb muscles, mild sensory deficits of position, vibration and pain/temperature, pes cavus, and symmetrically absent or reduced muscle and sensory action potentials with relatively preserved nerve conduction velocities in neurophysiological studies) as well as pyramidal tract involvement (spasticity, hyperreflexia). Spasticity and pain may be the presenting symptoms.","definition_xrefs":["Orphanet:324611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"autosomal dominant Charcot-Marie-Tooth disease type 2 due to KIF5A mutation","secondary_identifiers":["UMLS:C4707173","SCTID:764730007","GARD:21447","MEDGEN:1633598"],"synonyms":[{"name":"CMT2 due to KIF5A mutation","type":"exact"}],"termid":"MONDO:0017940","xrefs":{"Monarch":{"xref_id":"0017940"}}}


id: PR:Q9C0W4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC83.19c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0W4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C83.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.19c","synonyms":[{"name":"Spom972h-SPBC83.19c","type":"exact"}],"termid":"PR:Q9C0W4"}


id: FYPO:0005761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein glycosylation is normal (i.e. indistinguishable from wild type). Protein O-linked glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid via a hydroxyl or phenol group, forming an O-glycan.","definition_xrefs":["PomBase:mah","GO:0006493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein glycosylation during vegetative growth","termid":"FYPO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein O-linked glycosylation during vegetative growth","synonyms":[{"name":"normal protein O-linked glycosylation during mitotic cell cycle","type":"related"},{"name":"normal protein amino acid O-linked glycosylation during vegetative growth","type":"exact"},{"name":"normal protein/peptide O-linked glycosylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005761"}


id: MONDO:1040055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by a variant or variants in the PRPH2 gene.","definition_xrefs":["PMID:25447119","PMID:26061163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"PRPH2-related retinopathy","synonyms":[{"name":"PRPH2-related retinopathy","type":"exact"}],"termid":"MONDO:1040055","xrefs":{"Monarch":{"xref_id":"1040055"}}}


id: PATO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000368 towards1 (obsolete PATO:0000368)","termid":"PATO:0000368"}


id: FYPO:0007095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the actin fusion focus is increased.","definition_xrefs":["PMID:31495586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"},{"relation_name":"is_a","term_name":"abnormal protein localization to actin fusion focus","termid":"FYPO:0006503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to actin fusion focus","synonyms":[{"name":"increased protein localisation to actin fusion focus","type":"exact"}],"termid":"FYPO:0007095"}


id: MONDO:0016349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that is present at birth.","definition_xrefs":["NCIT:C98876"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic central nervous system malformation (obsolete MONDO:0015219)","termid":"MONDO:0015219"},{"relation_name":"is_a","term_name":"hydrocephalus","termid":"MONDO:0001150"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital hydrocephalus","secondary_identifiers":["MedDRA:10010506","OMIMPS:236600","SCTID:47032000","Orphanet:2185","NANDO:2200822","GARD:6682","ICD10CM:Q03","MEDGEN:9336","UMLS:C0020256","icd11.foundation:1878746673"],"synonyms":[{"name":"HYC3","type":"related"},{"name":"congenital hydrocephalus","type":"exact"}],"termid":"MONDO:0016349","xrefs":{"Monarch":{"xref_id":"0016349"}}}


id: MONDO:0024528
data:
  {"annotated_genes":["SJAG_02658"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86884],"is_not":false,"summary":null,"term":"MONDO:0024528"}]},"cv_name":"mondo","definition":"Any autosomal dominant progressive external ophthalmoplegia in which the cause of the disease is a mutation in the POLG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant progressive external ophthalmoplegia","termid":"MONDO:0008003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02658":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005336","MONDO:0002320","MONDO:0005066","MONDO:0000426"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:157640","UMLS:C1834846","DOID:0111521","GARD:13174","MEDGEN:371919"],"synonyms":[{"name":"PEOA1","type":"exact"},{"name":"POLG autosomal dominant progressive external ophthalmoplegia","type":"exact"},{"name":"autosomal dominant progressive external ophthalmoplegia caused by mutation in POLG","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 1","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal dominant 1","type":"exact"}],"termid":"MONDO:0024528","terms_by_termid":{"MONDO:0024528":null},"xrefs":{"Monarch":{"xref_id":"0024528"}}}


id: GO:0001301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any chromatin organization process that occurs during the lifespan of the cell that results in changes in chromatin structure. Such changes may lead to gene dysregulation and ultimately to a loss in cell homeostasis, bringing about an aging phenotype.","definition_xrefs":["PMID:12044938","GOC:vw","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete progressive alteration of chromatin involved in cell aging (obsolete GO:0001301)","synonyms":[{"name":"age-dependent accumulation of genetic damage","type":"related"},{"name":"progressive alteration of chromatin during cell ageing","type":"exact"},{"name":"progressive alteration of chromatin during cell aging","type":"related"}],"termid":"GO:0001301"}


id: MONDO:0013434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the CCDC39 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 14","secondary_identifiers":["GARD:15713","MEDGEN:462486","OMIM:613807","UMLS:C3151136","DOID:0110598","NCIT:C148370"],"synonyms":[{"name":"CCDC39 primary ciliary dyskinesia","type":"exact"},{"name":"CILD14","type":"exact"},{"name":"ciliary dyskinesia, primary, 14","type":"related"},{"name":"ciliary dyskinesia, primary, 14, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 14","type":"exact"},{"name":"primary ciliary dyskinesia 14","type":"exact"},{"name":"primary ciliary dyskinesia 14 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in CCDC39","type":"exact"},{"name":"primary ciliary dyskinesia type 14","type":"exact"}],"termid":"MONDO:0013434","xrefs":{"Monarch":{"xref_id":"0013434"}}}


id: PBO:0000983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine synthase Cys12","termid":"PBO:0000983"}


id: GO:0032136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing an A/C mispair.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"adenine/cytosine mispair binding","synonyms":[{"name":"A/C mispair binding","type":"exact"},{"name":"C/A mispair binding","type":"exact"},{"name":"cytosine/adenine mispair binding","type":"related"}],"termid":"GO:0032136"}


id: PBO:0084960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myo-inositol transporter; member of the sugar transporter superfamily; expressed constitutively; ITR2 has a paralog, ITR1, that arose from the whole genome duplication","termid":"PBO:0084960"}


id: GO:0032741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-18 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-18 production","termid":"GO:0032661"},{"relation_name":"positively_regulates","term_name":"interleukin-18 production","termid":"GO:0032621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-18 production","secondary_identifiers":["GO:0045383","GO:0150122"],"synonyms":[{"name":"activation of interleukin-18 production","type":"narrow"},{"name":"positive regulation of IL-18 production","type":"exact"},{"name":"positive regulation of interleukin-18 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-18 secretion","type":"narrow"},{"name":"stimulation of interleukin-18 production","type":"narrow"},{"name":"up regulation of interleukin-18 production","type":"exact"},{"name":"up-regulation of interleukin-18 production","type":"exact"},{"name":"upregulation of interleukin-18 production","type":"exact"}],"termid":"GO:0032741"}


id: PBO:0113491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; regulates multidrug resistance and the oxidative stress response; forms a heterodimer with Pdr1p; contains a Zn(II)2Cys6 zinc finger domain that interacts with a pleiotropic drug resistance element in vitro; negative regulator of autophagy, modulating the transcription of genes involved in NADPH production and the pentose phosphate pathway; Stb5p expression is reduced during nitrogen starvation and autophagy induction, while STB5 mRNA levels are significantly increased","termid":"PBO:0113491"}


id: FYPO:0007429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation does not occur during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah","PMID:15805471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein degradation during cellular response to DNA damage","synonyms":[{"name":"abolished protein breakdown during cellular response to DNA damage","type":"exact"},{"name":"abolished protein catabolic process during cellular response to DNA damage","type":"exact"},{"name":"abolished protein catabolism during cellular response to DNA damage","type":"exact"},{"name":"abolished protein degradation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein degradation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein degradation abolished during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0007429"}


id: PATO:0001585
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to transmit of an entity through a medium.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conductivity","termid":"PATO:0001585"}


id: GO:0008134
data:
  {"annotated_genes":["SJAG_00202","SJAG_00692","SJAG_03900","SJAG_02458","SJAG_03120","SJAG_01523","SJAG_00095","SJAG_02174","SJAG_03095","SJAG_00159","SJAG_03007","SJAG_00650"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001179"},{"annotations":[77204,76064,70859,66503,58199,71055,72295,77608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017025"},{"annotations":[79506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001096"},{"annotations":[76550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001097"},{"annotations":[72159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001156"}]},"cv_name":"molecular_function","definition":"Binding to a transcription factor, a protein required to initiate or regulate transcription.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00159":null,"SJAG_00202":null,"SJAG_00650":null,"SJAG_00692":null,"SJAG_01523":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_03007":null,"SJAG_03095":null,"SJAG_03120":null,"SJAG_03900":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"transcription factor binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"TF binding","type":"exact"},{"name":"transcription regulator binding","type":"related"}],"termid":"GO:0008134","terms_by_termid":{"GO:0001096":null,"GO:0001097":null,"GO:0001156":null,"GO:0001179":null,"GO:0017025":null}}


id: PBO:0003411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup131","termid":"PBO:0003411"}


id: PBO:0065722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWP1 homolog, endonuclein","termid":"PBO:0065722"}


id: GO:0019254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carnitine, where metabolism is linked to CoA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine metabolic process","termid":"GO:0009437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carnitine metabolic process, CoA-linked","secondary_identifiers":["MetaCyc:CARNMET-PWY"],"synonyms":[{"name":"carnitine metabolism, CoA-linked","type":"exact"}],"termid":"GO:0019254"}


id: PBO:0117376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome small subunit biogenesis GTPase related protein Gep3","termid":"PBO:0117376"}


id: GO:0031369
data:
  {"annotated_genes":["SJAG_02471","SJAG_04981","SJAG_02390","SJAG_03147","SJAG_05003","SJAG_01436","SJAG_03847","SJAG_04744","SJAG_00458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59173,71214,71770,72281,73138,74707,75075,80473],"is_not":false,"summary":null,"term":"GO:0031369"},{"annotations":[72261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071074"}]},"cv_name":"molecular_function","definition":"Binding to a translation initiation factor, any polypeptide factor involved in the initiation of ribosome-mediated translation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00458":null,"SJAG_01436":null,"SJAG_02390":null,"SJAG_02471":null,"SJAG_03147":null,"SJAG_03847":null,"SJAG_04744":null,"SJAG_04981":null,"SJAG_05003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"translation initiation factor binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0031369","terms_by_termid":{"GO:0031369":null,"GO:0071074":null}}


id: PBO:0079745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urothelial cancer associated 1","termid":"PBO:0079745"}


id: PR:O13745
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tfb1 gene.","definition_xrefs":["UniProtKB:O13745","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.11c","synonyms":[{"name":"RNA polymerase II transcription factor B 73 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B p73 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tfb1","type":"exact"}],"termid":"PR:O13745"}


id: MONDO:0007703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete heart, malformation of (obsolete MONDO:0007703)","termid":"MONDO:0007703","xrefs":{"Monarch":{"xref_id":"0007703"}}}


id: GO:0018580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethylnitronate + O2 = acetaldehyde + nitrite.","definition_xrefs":["RHEA:28767","EC:1.13.12.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitronate monooxygenase activity","secondary_identifiers":["MetaCyc:2-NITROPROPANE-DIOXYGENASE-RXN"],"synonyms":[{"name":"2-nitropropane dioxygenase activity","type":"related"},{"name":"nitronate:oxygen 2-oxidoreductase (nitrite-forming) activity","type":"exact"}],"termid":"GO:0018580"}


id: PATO:0000710
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000710 time value (obsolete PATO:0000710)","termid":"PATO:0000710"}


id: GO:0016115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"},{"relation_name":"is_a","term_name":"isoprenoid catabolic process","termid":"GO:0008300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"terpenoid catabolic process","synonyms":[{"name":"terpenoid breakdown","type":"exact"},{"name":"terpenoid catabolism","type":"exact"},{"name":"terpenoid degradation","type":"exact"}],"termid":"GO:0016115"}


id: GO:0090342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of cell aging. Cell aging is the progression of the cell from its inception to the end of its lifespan.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell aging (obsolete GO:0090342)","termid":"GO:0090342"}


id: PBO:0084499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for chromosome synapsis; displays Red1p dependent localization to the unsynapsed axial-lateral elements of the synaptonemal complex; required for chiasma formation; in vitro, displays the ability to promote intra- and intermolecular synapsis between double-stranded DNA molecules and to fold DNA into rigid protein-DNA filaments","termid":"PBO:0084499"}


id: PBO:0074571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 27","termid":"PBO:0074571"}


id: GO:0050541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-carotene + O2 = beta-apo-10'-carotenal + beta-ionone.","definition_xrefs":["PMID:11278918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"beta,beta-carotene-9',10'-dioxygenase activity","synonyms":[{"name":"b,b-carotene-9',10'-dioxygenase activity","type":"exact"}],"termid":"GO:0050541"}


id: PBO:0000620
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hydroxy Urea Sensitive","termid":"PBO:0000620"}


id: FYPO:0007548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear envelope organization is abnormal in the region of the nuclear envelope that surrounds the mitotic nuclear bridge during mitosis.","definition_xrefs":["PomBase:mah","PMID:32502403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic nuclear bridge midzone membrane domain organization","synonyms":[{"name":"abnormal MMD organization","type":"exact"},{"name":"abnormal mitotic nuclear bridge midzone envelope organization","type":"exact"},{"name":"abnormal mitotic nuclear bridge midzone membrane domain organization during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic nuclear bridge midzone membrane domain organization during vegetative growth","type":"exact"},{"name":"abnormal nuclear bridge midzone membrane domain organization","type":"exact"},{"name":"abnormal nuclear envelope organization at mitotic nuclear bridge midzone","type":"exact"}],"termid":"FYPO:0007548"}


id: GO:0070567
data:
  {"annotated_genes":["SJAG_01704","SJAG_00946","SJAG_02288","SJAG_04628","SJAG_03563","SJAG_00426"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75285,70625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052927"},{"annotations":[70223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004105"},{"annotations":[75731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004306"},{"annotations":[80423,119477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004605"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a cytidylyl group to an acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_00946":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_03563":null,"SJAG_04628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cytidylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"PMID:25318672":null},"termid":"GO:0070567","terms_by_termid":{"GO:0004105":null,"GO:0004306":null,"GO:0004605":null,"GO:0008654":null,"GO:0052927":null}}


id: PBO:0046936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member B","termid":"PBO:0046936"}


id: PBO:0071510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 13","termid":"PBO:0071510"}


id: PBO:0055588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3024","termid":"PBO:0055588"}


id: PBO:0050977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 20","termid":"PBO:0050977"}


id: PBO:0055883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit A","termid":"PBO:0055883"}


id: PBO:0035972
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_invertase_activity","termid":"PBO:0035972"}


id: PBO:0089114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import/export signal receptor","termid":"PBO:0089114"}


id: PBO:0079627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 O","termid":"PBO:0079627"}


id: MONDO:0019924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paternal uniparental disomy of chromosome 20 is a very rare chromosomal anomaly in which both copies of chromosome 20 are inherited from the father. The main features described are high birth weight and/or early-onset obesity, relative macrocephaly, and tall stature. Most patients were ascertained during sporadic pseudohypoparathyroidism type 1b testing and have UPD involving variable segments of the long arm of chromosome 20.","definition_xrefs":["Orphanet:96194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal uniparental disomy of chromosome 20","secondary_identifiers":["MEDGEN:897979","GARD:19343","icd11.foundation:1406068218","UMLS:C4275028","SCTID:715736008"],"synonyms":[{"name":"UPD(20)pat","type":"exact"},{"name":"paternal UPD(20)","type":"exact"},{"name":"paternal UPD20","type":"exact"},{"name":"paternal uniparental disomy of chromosome type 20","type":"exact"}],"termid":"MONDO:0019924","xrefs":{"Monarch":{"xref_id":"0019924"}}}


id: PBO:0027436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nonsense-mediated_decay","termid":"PBO:0027436"}


id: PATO:0001388
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disomy quality inhering in a bearer by virtue of the bearer's containing two copies of the chromosome from one of the parents (with no contribution from the other parent).","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Uniparental_disomy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disomy","termid":"PATO:0001387"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uniparental disomy","termid":"PATO:0001388"}


id: PBO:0053347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 235","termid":"PBO:0053347"}


id: FYPO:0002910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to transcribed regions of chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin at transcribed regions during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at transcribed regions during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at transcribed regions during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to transcribed chromatin regions during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at transcribed regions during vegetative growth","type":"exact"}],"termid":"FYPO:0002910"}


id: PR:Q9P785
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mucin-7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03147","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LisH domain-containing protein C1711.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.05","secondary_identifiers":["UniProtKB:Q9P785"],"synonyms":[{"name":"Spom972h-MUC7","type":"exact"}],"termid":"PR:Q9P785"}


id: MONDO:0000082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal descent of a pelvic organ resulting in the protrusion of the organ beyond its normal anatomical confines. Symptoms often include vaginal discomfort, dyspareunia; urinary stress incontinence; and fecal incontinence.","definition_xrefs":["MESH:D056887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelvic organ prolapse","secondary_identifiers":["MEDGEN:209090","EFO:0004710","UMLS:C0877015","SCTID:237113009","icd11.foundation:148580117"],"termid":"MONDO:0000082","xrefs":{"Monarch":{"xref_id":"0000082"}}}


id: PBO:0058607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6739","termid":"PBO:0058607"}


id: GO:1902516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to sn-glycerol 3-phosphate.","definition_xrefs":["GOC:TermGenie","PMID:23013274","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"sn-glycerol 3-phosphate binding","termid":"GO:1902516"}


id: PBO:0075864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 4","termid":"PBO:0075864"}


id: PBO:0113346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for delivery of copper to Cox1p; mitochondrial inner membrane protein; involved in oxidative stress response; association with mitochondrial ribosomes suggests that copper delivery may occur during translation of Cox1p","termid":"PBO:0113346"}


id: PR:G2TRR1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gem7 gene.","definition_xrefs":["UniProtKB:G2TRR1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem-associated protein 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.16","synonyms":[{"name":"Spom972h-gem7","type":"exact"}],"termid":"PR:G2TRR1"}


id: PBO:0018261
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Fizzy Related","termid":"PBO:0018261"}


id: PBO:0027804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_JM216","termid":"PBO:0027804"}


id: PR:P87175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-(apurinic or apyrimidinic site) lyase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR22748:SF0","OMA:SCHPO02802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-(apurinic or apyrimidinic site) lyase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.10","secondary_identifiers":["UniProtKB:P87175"],"synonyms":[{"name":"AP endonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-APEX2","type":"exact"},{"name":"apurinic-apyrimidinic endonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87175"}


id: PBO:0030247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_freezing","termid":"PBO:0030247"}


id: PBO:0050236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene14","termid":"PBO:0050236"}


id: FYPO:0003080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which genetic imprinting at the mating-type locus does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal genetic imprinting at mating-type locus","termid":"FYPO:0003079"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"abolished genetic imprinting at mating-type locus","synonyms":[{"name":"abolished genetic imprinting at mating-type locus during mitotic cell cycle","type":"related"},{"name":"genetic imprinting at mating-type locus abolished","type":"exact"},{"name":"genetic imprinting at mating-type locus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003080"}


id: MONDO:0024881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that arises from a pre-existing lower grade lesion, or as a result of a primary lesion that has spread to secondary sites, or due to a complication of a cancer treatment.","definition_xrefs":["NCIT:C4968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"secondary neoplasm","termid":"MONDO:0024882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"secondary malignant neoplasm","secondary_identifiers":["ICD9:199.1","ICD9:198.89","MEDGEN:473807","SCTID:128462008","UMLS:C3266877","EFO:0009812"],"synonyms":[{"name":"secondary cancer","type":"exact"},{"name":"secondary malignancy","type":"exact"},{"name":"secondary malignant neoplasm","type":"exact"}],"termid":"MONDO:0024881","xrefs":{"Monarch":{"xref_id":"0024881"}}}


id: PBO:0046543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group FH21 member 1","termid":"PBO:0046543"}


id: PBO:0109463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR9-2 host gene","termid":"PBO:0109463"}


id: PBO:0064073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 107","termid":"PBO:0064073"}


id: GO:0071160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [L-Asp(4-L-Arg)]n + L-Asp = ADP + phosphate + [L-Asp(4-L-Arg)]n-L-Asp.","definition_xrefs":["EC:6.3.2.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyanophycin synthetase activity","termid":"GO:0043860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"cyanophycin synthetase activity (L-aspartate-adding)","secondary_identifiers":["RHEA:13277"],"termid":"GO:0071160"}


id: GO:1902193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-methylbut-2-enoyl-CoA(4-).","definition_xrefs":["PMID:15574432","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"2-methylbut-2-enoyl-CoA(4-) metabolic process","termid":"GO:1902192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150","GO:0006629","GO:0006790"],"is_obsolete":false,"name":"2-methylbut-2-enoyl-CoA(4-) catabolic process","synonyms":[{"name":"2-methylbut-2-enoyl-CoA(4-) breakdown","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) catabolism","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) degradation","type":"exact"}],"termid":"GO:1902193"}


id: GO:0099564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic transmission via modification of the structure of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification of synaptic structure","termid":"GO:0099563"},{"relation_name":"regulates","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"modification of synaptic structure, modulating synaptic transmission","termid":"GO:0099564"}


id: GO:1902650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H2A-H2B dimer displacement.","definition_xrefs":["GO_REF:0000058","GOC:di","GOC:TermGenie","PMID:22199252"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H2A-H2B dimer displacement (obsolete GO:1902650)","synonyms":[{"name":"down regulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"down-regulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"downregulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"inhibition of histone H2A-H2B dimer displacement","type":"narrow"}],"termid":"GO:1902650"}


id: GO:1990218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the abscisic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17304219"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of abscisic acid levels in host (obsolete GO:1990218)","termid":"GO:1990218"}


id: GO:0016090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prenols, isoprenoids of general formula (H-CH2-C(CH3)=CH-CH2-)n-OH, any primary monohydroxy alcohol whose carbon skeleton consists of two or more isoprenoid residues linked head to tail.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"prenol metabolic process","synonyms":[{"name":"prenol metabolism","type":"exact"}],"termid":"GO:0016090"}


id: GO:0018209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-serine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine modification","termid":"GO:0018209"}


id: GO:0042376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phylloquinone, vitamin K1, a quinone-derived compound synthesized by green plants.","definition_xrefs":["GOC:jl","PMID:27337968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phylloquinone metabolic process","termid":"GO:0042374"},{"relation_name":"is_a","term_name":"vitamin K catabolic process","termid":"GO:0042377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"phylloquinone catabolic process","synonyms":[{"name":"phylloquinone breakdown","type":"exact"},{"name":"phylloquinone catabolism","type":"exact"},{"name":"phylloquinone degradation","type":"exact"},{"name":"phytomenadione catabolic process","type":"exact"},{"name":"phytomenadione catabolism","type":"exact"},{"name":"phytonadione catabolic process","type":"exact"},{"name":"phytonadione catabolism","type":"exact"},{"name":"phytylmenaquinone catabolic process","type":"exact"},{"name":"phytylmenaquinone catabolism","type":"exact"},{"name":"vitamin K1 catabolic process","type":"exact"},{"name":"vitamin K1 catabolism","type":"exact"}],"termid":"GO:0042376"}


id: GO:0035834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an indole alkaloid, an alkaloid containing an indole skeleton.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole alkaloid metabolic process","synonyms":[{"name":"indole alkaloid metabolism","type":"exact"}],"termid":"GO:0035834"}


id: PBO:0065330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 54","termid":"PBO:0065330"}


id: PBO:0048638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 8","termid":"PBO:0048638"}


id: RO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"bearer_of","termid":"RO:0000053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_function","termid":"RO:0000085"}


id: GO:0060103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the collagen and cuticulin-based cuticle extracellular matrix, a collagen and cuticulin-based noncellular, multilayered structure that is synthesized by an underlying ectodermal (hypodermal) cell layer.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete collagen and cuticulin-based cuticle extracellular matrix part (obsolete GO:0060103)","termid":"GO:0060103"}


id: PBO:0074716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 77","termid":"PBO:0074716"}


id: MONDO:0012038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speech-sound disorder","secondary_identifiers":["MEDGEN:866372","OMIM:608445","UMLS:C4019167","MESH:C563928"],"synonyms":[{"name":"SSD","type":"related"},{"name":"speech-sound disorder","type":"exact"}],"termid":"MONDO:0012038","xrefs":{"Monarch":{"xref_id":"0012038"}}}


id: PBO:0091209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr","termid":"PBO:0091209"}


id: PBO:0048936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gon-4 like","termid":"PBO:0048936"}


id: MONDO:0009494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Ketoadipicaciduria (obsolete MONDO:0009494)","termid":"MONDO:0009494","xrefs":{"Monarch":{"xref_id":"0009494"}}}


id: MONDO:0010614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked congenital generalized hypertrichosis is an extremely rare type of hypertrichosis lanuginosa congenita, a congenital skin disease, which is characterized by hair overgrowth on the entire body in males, and mild and asymmetric hair overgrowth in females. It is associated with a mild facial dysmorphism (anterverted nostrils, moderate prognathism), and, in a kindred, it was also associated with dental anomalies and deafness.","definition_xrefs":["Orphanet:79495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis lanuginosa congenita","termid":"MONDO:0016381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"X-linked congenital generalized hypertrichosis","secondary_identifiers":["OMIM:307150","GARD:2863","MEDGEN:1856186","MESH:C538388","UMLS:C5887323"],"synonyms":[{"name":"Cgh","type":"related"},{"name":"HTC2","type":"related"},{"name":"Macias Flores-Garcia Cruz-Rivera syndrome","type":"exact"},{"name":"Macias-Flores Garcia-Cruz Rivera syndrome","type":"related"},{"name":"chromosome Xq27.1 Interchromosomal insertion syndrome","type":"related"},{"name":"chromosome Xq27.1 interchromosomal insertion syndrome","type":"related"},{"name":"congenital generalised hypertrichosis, Macias-Flores type","type":"exact"},{"name":"congenital generalized hypertrichosis, Macias-Flores type","type":"exact"},{"name":"hCG","type":"related"},{"name":"hypertrichosis congenital generalised X-linked","type":"related"},{"name":"hypertrichosis congenital generalized X-linked","type":"related"},{"name":"hypertrichosis, congenital generalised","type":"related"},{"name":"hypertrichosis, congenital generalized","type":"related"},{"name":"hypertrichosis, congenital generalized, X-linked dominant","type":"exact"}],"termid":"MONDO:0010614","xrefs":{"Monarch":{"xref_id":"0010614"}}}


id: MONDO:0012867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary spastic paraplegia that has material basis in variation in the chromosome region 4p16-p15.","definition_xrefs":["PMID:18401025","DOID:0110789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 38","secondary_identifiers":["MEDGEN:436764","GARD:17065","OMIM:612335","Orphanet:171617","MESH:C567349","UMLS:C2676732"],"synonyms":[{"name":"SPG38","type":"exact"},{"name":"autosomal dominant spastic paraplegia 38","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 38","type":"exact"},{"name":"hereditary spastic paraplegia type 38","type":"exact"},{"name":"spastic paraplegia 38, autosomal dominant","type":"related"}],"termid":"MONDO:0012867","xrefs":{"Monarch":{"xref_id":"0012867"}}}


id: GO:1905387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a beta-carotene stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:16771696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to beta-carotene","synonyms":[{"name":"response to beta,beta-carotene","type":"exact"}],"termid":"GO:1905387"}


id: GO:0099621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-4-deoxy-4-formamido-beta-L-arabinopyranose + ditrans,octacis-undecaprenyl phosphate = UDP + 4-deoxy-4-formamido-alpha-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate.","definition_xrefs":["GOC:dos","PMID:15695810","GOC:al","PMID:11706007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase activity","secondary_identifiers":["GO:0103019","EC:2.4.2.53","RHEA:27722","MetaCyc:RXN0-3521"],"synonyms":[{"name":"Ara4FN transferase activity","type":"exact"},{"name":"undecaprenyl phosphate-L-Ara4FN transferase activity","type":"exact"},{"name":"undecaprenyl-phosphate Ara4FN transferase activity","type":"exact"}],"termid":"GO:0099621"}


id: PBO:0074468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submaxillary gland androgen regulated protein 3B","termid":"PBO:0074468"}


id: PBO:0058249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4536-2","termid":"PBO:0058249"}


id: GO:0070829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chromatin organization process that preserves heterochromatin in a stable functional or structural state.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete heterochromatin maintenance (obsolete GO:0070829)","synonyms":[{"name":"heterochromatin maintenance involved in chromatin silencing","type":"related"},{"name":"maintenance of chromatin silencing","type":"related"},{"name":"maintenance of heterochromatic silencing","type":"related"}],"termid":"GO:0070829"}


id: GO:0051101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA binding. DNA binding is any process in which a gene product interacts selectively with DNA (deoxyribonucleic acid).","definition_xrefs":["GOC:tb","GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of DNA binding","termid":"GO:0051101"}


id: GO:0075209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of cAMP-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host cAMP-mediated signal transduction (obsolete GO:0075209)","synonyms":[{"name":"positive regulation by symbiont of host cAMP-mediated signal transduction","type":"exact"},{"name":"positive regulation by symbiont of host cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075209"}


id: GO:0033937
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of the beta-ketopyranosidic linkages of 3-deoxy-D-manno-2-octulosonate in capsular polysaccharides.","definition_xrefs":["EC:3.2.1.124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"3-deoxy-2-octulosonidase activity","secondary_identifiers":["MetaCyc:3.2.1.124-RXN"],"synonyms":[{"name":"2-keto-3-deoxyoctonate hydrolase activity","type":"related"},{"name":"capsular-polysaccharide 3-deoxy-D-manno-2-octulosonohydrolase activity","type":"related"},{"name":"octulofuranosylono hydrolase activity","type":"related"},{"name":"octulopyranosylonohydrolase activity","type":"related"},{"name":"octulosylono hydrolase activity","type":"related"}],"termid":"GO:0033937"}


id: FYPO:0006446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any unspliced or incompletely spliced mRNA precursor measured in the mitochondrion is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased pre-mRNA level","termid":"FYPO:0001908"},{"relation_name":"is_a","term_name":"increased mitochondrial RNA level","termid":"FYPO:0003424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased mitochondrial pre-mRNA level","synonyms":[{"name":"accumulation of mitochondrial pre-mRNA transcripts","type":"related"},{"name":"increased mitochondrial pre-mRNA level during mitotic cell cycle","type":"related"},{"name":"increased mitochondrial pre-mRNA level during vegetative growth","type":"exact"},{"name":"increased mitochondrial pre-mRNA transcript level","type":"exact"},{"name":"increased mitochondrial re-mRNA accumulation","type":"related"},{"name":"increased pre-mRNA level in mitochondrion","type":"exact"}],"termid":"FYPO:0006446"}


id: PBO:0066446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REV3L intronic transcript 1","termid":"PBO:0066446"}


id: MONDO:0001978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carcinoma of the ureter without spread to any other region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ureter carcinoma","termid":"MONDO:0006481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"regional ureteric cancer","secondary_identifiers":["MEDGEN:167733","DOID:14491","NCIT:C9356","UMLS:C0854921"],"synonyms":[{"name":"regional malignant ureteral tumor","type":"exact"},{"name":"regional malignant ureteral tumour","type":"exact"},{"name":"regional ureter carcinoma","type":"exact"},{"name":"regional ureteric carcinoma","type":"exact"}],"termid":"MONDO:0001978","xrefs":{"Monarch":{"xref_id":"0001978"}}}


id: PBO:0061433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group I member 2","termid":"PBO:0061433"}


id: MONDO:0024491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic qualifier indicating that a cancerous lesion is well differentiated.","definition_xrefs":["NCIT:C28077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor grade 1 or 2, general grading system","termid":"MONDO:0024495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor grade 1, general grading system","secondary_identifiers":["UMLS:C0475269","MEDGEN:634565"],"synonyms":[{"name":"G1","type":"exact"},{"name":"grade 1","type":"exact"},{"name":"grade I","type":"exact"},{"name":"low grade","type":"exact"},{"name":"well differentiated","type":"exact"}],"termid":"MONDO:0024491","xrefs":{"Monarch":{"xref_id":"0024491"}}}


id: MONDO:1011698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reduced glutathione deficiency, non-human animal","termid":"MONDO:1011699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced glutathione deficiency due to amino-acid transport defect, non-human animal","secondary_identifiers":["OMIA:001234"],"termid":"MONDO:1011698","xrefs":{"Monarch":{"xref_id":"1011698"}}}


id: PATO:0001264
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow","termid":"PATO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light yellow","synonyms":[{"name":"blond","type":"related"}],"termid":"PATO:0001264"}


id: PBO:0076720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichohyalin","termid":"PBO:0076720"}


id: MOD:00647
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to either N-acetyl-L-serine, O-acetyl-L-serine, or N,O-diacetyl-L-serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated residue","termid":"MOD:00394"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylated L-serine","synonyms":[{"name":"AcSer","type":"exact"}],"termid":"MOD:00647"}


id: PBO:0053274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor B1","termid":"PBO:0053274"}


id: PR:P0CY17
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mat1-Mc gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CY17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mc (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.09","synonyms":[{"name":"Spom972h-mat1-Mc","type":"exact"},{"name":"mat-Mc (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CY17"}


id: PBO:0072000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 2","termid":"PBO:0072000"}


id: GO:2000294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of defecation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of defecation","termid":"GO:2000292"},{"relation_name":"positively_regulates","term_name":"defecation","termid":"GO:0030421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of defecation","termid":"GO:2000294"}


id: MONDO:0010049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic paraplegia-glaucoma-intellectual disability syndrome is characterized by progressive spastic paraplegia, glaucoma and intellectual deficit. It has been described in two families. The second described sibship was born to consanguineous parents. The mode of inheritance is autosomal recessive.","definition_xrefs":["Orphanet:2818"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia-glaucoma-intellectual disability syndrome","secondary_identifiers":["UMLS:C1849113","MESH:C564809","GARD:4931","MEDGEN:376520","OMIM:270850"],"synonyms":[{"name":"spastic paresis glaucoma intellectual disability","type":"related"},{"name":"spastic paresis glaucoma mental retardation","type":"related"},{"name":"spastic paresis, glaucoma, and intellectual disability","type":"related"},{"name":"spastic paresis, glaucoma, and mental retardation","type":"related"}],"termid":"MONDO:0010049","xrefs":{"Monarch":{"xref_id":"0010049"}}}


id: GO:0019724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved with the carrying out of an immune response by a B cell, through, for instance, the production of antibodies or cytokines, or antigen presentation to T cells.","definition_xrefs":["GO_REF:0000022","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"},{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell mediated immunity","synonyms":[{"name":"B lymphocyte mediated immune effector process","type":"exact"},{"name":"B lymphocyte mediated immunity","type":"exact"},{"name":"B-cell mediated immune effector process","type":"exact"},{"name":"B-cell mediated immunity","type":"exact"},{"name":"B-lymphocyte mediated immune effector process","type":"exact"},{"name":"B-lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0019724"}


id: PBO:0028958
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_UDP-galactose_transmembrane_transport","termid":"PBO:0028958"}


id: MONDO:0005077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious bacterial respiratory infection caused by Bordetella pertussis. It is characterized by severe and uncontrollable cough, resulting in a whooping sound during breathing following the cough.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"bordetellosis","termid":"MONDO:0037872"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pertussis","secondary_identifiers":["DOID:1116","MedDRA:10047974","EFO:0000650","ICD9:033.9","NCIT:C85231","UMLS:C0043167","GARD:8692","NORD:1569","Orphanet:1489","SCTID:27836007","MESH:D014917","ICD9:033.0","MedDRA:10034738","ICD10CM:A37.1","ICD9:033","MEDGEN:12159"],"synonyms":[{"name":"Bordetella infection","type":"broad"},{"name":"Bordetella pertussis caused disease or disorder","type":"exact"},{"name":"Bordetella pertussis disease or disorder","type":"exact"},{"name":"Bordetella pertussis infection","type":"exact"},{"name":"Bordetella pertussis infectious disease","type":"exact"},{"name":"WC - whooping cough","type":"exact"},{"name":"infection due to Bordetella pertussis","type":"related"},{"name":"pertussis","type":"exact"},{"name":"whooping cough","type":"exact"}],"termid":"MONDO:0005077","xrefs":{"Monarch":{"xref_id":"0005077"}}}


id: PBO:0040773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEND7 divergent transcript","termid":"PBO:0040773"}


id: PBO:0086356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative 1,3-beta-glucanosyltransferase; has similarity go other GAS family members; low abundance, possibly inactive member of the GAS family of GPI-containing proteins; localizes to the cell wall; mRNA induced during sporulation","termid":"PBO:0086356"}


id: MONDO:0011936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia with brain and digit anomalies is characterized by anophthalmia or microphthalmia, retinal dystrophy, and/or myopia, associated in some cases with cerebral anomalies. It has been described in two families. Polydactyly may also be present. Linkage analysis allowed identification of mutations in the BMP4 gene, which has already been shown to play a role in eye development.","definition_xrefs":["Orphanet:139471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia with brain and digit anomalies","secondary_identifiers":["OMIM:607932","MESH:C566440","GARD:3645","SCTID:721878003","UMLS:C1864689","DOID:0111805","MEDGEN:355268"],"synonyms":[{"name":"Bakrania-Ragge syndrome","type":"exact"},{"name":"MCOPS6","type":"exact"},{"name":"anophthalmia clinical with micrognathia malformed ears digital anomalies and abnormal external genitalia","type":"related"},{"name":"anophthalmia, clinical, with micrognathia, malformed ears, digital anomalies, and abnormal external genitalia","type":"related"},{"name":"microphthalmia and pituitary anomalies","type":"related"},{"name":"microphthalmia syndromic 6","type":"related"},{"name":"microphthalmia with brain and digit anomalies","type":"exact"},{"name":"microphthalmia with brain and digit developmental anomalies","type":"related"},{"name":"microphthalmia, syndromic 6","type":"related"},{"name":"microphthalmia, syndromic type 6","type":"exact"},{"name":"syndromic microphthalmia type 6","type":"exact"}],"termid":"MONDO:0011936","xrefs":{"Monarch":{"xref_id":"0011936"}}}


id: PBO:0079935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream transcription factor 1","termid":"PBO:0079935"}


id: PBO:0069012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 256, pseudogene","termid":"PBO:0069012"}


id: PBO:0083557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene INP52; identified in a screen for mutants with decreased levels of rDNA transcription","termid":"PBO:0083557"}


id: MONDO:1010138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"autoimmune disease, non-human animal","termid":"MONDO:1012985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pemphigus, non-human animal","secondary_identifiers":["OMIA:001188"],"termid":"MONDO:1010138","xrefs":{"Monarch":{"xref_id":"1010138"}}}


id: PBO:0083870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-Box protein involved in proteasome-dependent degradation of Aah1p; involved in proteasome-dependent degradation of Aah1p during entry of cells into quiescence; interacts with Skp1","termid":"PBO:0083870"}


id: GO:0046570
data:
  {"annotated_genes":["SJAG_02293","SJAG_02689"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78672,80461],"is_not":false,"summary":null,"term":"GO:0046570"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-methyl-5-thio-D-ribulose 1-phosphate = 5-(methylthio)-2,3-dioxopentyl phosphate + H2O.","definition_xrefs":["EC:4.2.1.109","RHEA:15549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02293":null,"SJAG_02689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"methylthioribulose 1-phosphate dehydratase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:R145-RXN","Reactome:R-HSA-1237140","GO:0043809","KEGG_REACTION:R07392"],"synonyms":[{"name":"1-PMT-ribulose dehydratase activity","type":"related"},{"name":"5-methylthioribulose-1-phosphate 4-dehydratase activity","type":"exact"},{"name":"S-methyl-5-thio-D-ribulose-1-phosphate hydro-lyase [5-(methylthio)-2,3-dioxopentyl-phosphate-forming]","type":"related"},{"name":"S-methyl-5-thio-D-ribulose-1-phosphate hydro-lyase activity","type":"exact"},{"name":"S-methyl-5-thio-D-ribulose-1-phosphate hydro-lyase[5-(methylthio)-2,3-dioxopentyl-phosphate-forming]","type":"exact"},{"name":"methylthioribulose-1-phosphate dehydratase activity","type":"exact"}],"termid":"GO:0046570","terms_by_termid":{"GO:0046570":null}}


id: PBO:0091244
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat/KM 2.1x10^4 min-1 M-1","termid":"PBO:0091244"}


id: PBO:0014619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin-dependent kinase kinase 2","termid":"PBO:0014619"}


id: GO:0071995
data:
  {"annotated_genes":["SJAG_05213","SJAG_01344","SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97382,118507,96404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"}]},"cv_name":"biological_process","definition":"The directed movement of phytochelatins into the vacuole. Phytochelatins are a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"phytochelatin transmembrane transport","termid":"GO:0071994"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03497":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"phytochelatin import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadystin import into vacuole","type":"related"},{"name":"phytochelatin transport into vacuole","type":"exact"}],"termid":"GO:0071995","terms_by_termid":{"GO:0036246":null}}


id: SO:0000601
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000601 edited_by_G_addition (obsolete SO:0000601)","termid":"SO:0000601"}


id: MOD:00007
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a selenium atom for a sulfur atom.","definition_xrefs":["Unimod:162","PubMed:12148805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium containing residue","termid":"MOD:00745"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenium substitution for sulfur","synonyms":[{"name":"Delta:S(-1)Se(1)","type":"related"},{"name":"Se(S)Res","type":"exact"},{"name":"Selenium replaces sulphur","type":"related"}],"termid":"MOD:00007"}


id: PBO:0026648
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_catabolic_process_during_nitrogen_starvation","termid":"PBO:0026648"}


id: MONDO:0019895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 4","termid":"MONDO:0016903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 4q","secondary_identifiers":["MEDGEN:1680190","GARD:19327","UMLS:C5190514","Orphanet:96145"],"synonyms":[{"name":"distal deletion 4q","type":"exact"},{"name":"distal monosomy type 4q","type":"exact"},{"name":"monosomy 4qter","type":"exact"},{"name":"telomeric deletion 4q","type":"exact"}],"termid":"MONDO:0019895","xrefs":{"Monarch":{"xref_id":"0019895"}}}


id: PBO:0078374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalase pseudogene 1","termid":"PBO:0078374"}


id: GO:0043911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-lysine + 2-oxoglutarate = L-glutamate + 6-amino-2-oxohexanoate.","definition_xrefs":["PMID:17259313","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"D-lysine transaminase activity","synonyms":[{"name":"D-lysine aminotransferase activity","type":"exact"}],"termid":"GO:0043911"}


id: MONDO:0020989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The persistence of substantial fetal hemoglobin production into adulthood, usually associated with hemoglobinopathies due to mutations in the alpha and/or beta chain of hemoglobin.","definition_xrefs":["NCIT:C129072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hereditary persistence of fetal hemoglobin","secondary_identifiers":["MEDGEN:5495","SCTID:191201002","UMLS:C0019025","ICD9:282.7"],"synonyms":[{"name":"Disease, Haemoglobin F","type":"related"},{"name":"Disease, Hemoglobin F","type":"related"},{"name":"HEMOGLOBIN F DIS","type":"related"},{"name":"HPFH - Hereditary persistence of fetal hemoglobin","type":"related"},{"name":"HPFH - Hereditary persistence of foetal haemoglobin","type":"related"},{"name":"Haemoglobin F Disease","type":"related"},{"name":"Hb F disease","type":"related"},{"name":"Hemoglobin F Disease","type":"related"},{"name":"Hereditary Persistence of Fetal Hemoglobin","type":"related"},{"name":"Hereditary Persistence of Foetal Haemoglobin","type":"related"},{"name":"Hereditary persistence of fetal hemoglobin","type":"related"},{"name":"Hereditary persistence of foetal haemoglobin","type":"related"},{"name":"hereditary persistence of fetal hemoglobin","type":"exact"}],"termid":"MONDO:0020989","xrefs":{"Monarch":{"xref_id":"0020989"}}}


id: PBO:0062360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily T member 1","termid":"PBO:0062360"}


id: MOD:01178
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to S-(aspart-4-yloxy) thiocarbonate.","definition_xrefs":["PubMed:16627948","RESID:AA0432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(aspart-4-yloxy) thiocarbonate","synonyms":[{"name":"(2S)-2-amino-4-(carboxysulfanyl)oxy-4-oxobutanoic acid","type":"exact"},{"name":"4-aspartyloxysulfanylcarbonate","type":"exact"},{"name":"AspOSCO2H","type":"exact"},{"name":"O-carboxysulfanyl-4-oxo-L-homoserine","type":"exact"},{"name":"S-(aspart-4-yloxy) thiocarbonate","type":"exact"}],"termid":"MOD:01178"}


id: SO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_methylthio_N6_cis_hydroxyisopentenyl_adenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_methylthio_N6_cis_hydroxyisopentenyl_adenosine","secondary_identifiers":["RNAMOD:009"],"synonyms":[{"name":"2-methylthio-N6-(cis-hydroxyisopentenyl) adenosine","type":"exact"},{"name":"ms2io6A","type":"exact"},{"name":"two methylthio N6 cis hydroxyisopentenyl adenosine","type":"exact"}],"termid":"SO:0001303"}


