# terms

id: MONDO:0006216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polypoid epithelial neoplasm that arises from the gallbladder. According to the neoplastic growth pattern, it is classified as tubular, tubulopapillary, or papillary.","definition_xrefs":["NCIT:C7720"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"biliary tract neoplasm","termid":"MONDO:0005304"},{"relation_name":"is_a","term_name":"digestive system adenoma","termid":"MONDO:0006180"},{"relation_name":"is_a","term_name":"gallbladder neoplasm","termid":"MONDO:0021253"},{"relation_name":"is_a","term_name":"polyp of gallbladder","termid":"MONDO:0021416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"gallbladder adenoma","secondary_identifiers":["EFO:1000263","MEDGEN:116046","UMLS:C0238137","DOID:0050893"],"synonyms":[{"name":"adenoma of gallbladder","type":"exact"},{"name":"adenoma of the gallbladder","type":"exact"},{"name":"gall bladder adenoma","type":"exact"},{"name":"gallbladder adenoma","type":"exact"}],"termid":"MONDO:0006216","xrefs":{"Monarch":{"xref_id":"0006216"}}}


id: GO:1990550
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96893],"is_not":false,"summary":null,"term":"GO:1990550"}]},"cv_name":"biological_process","definition":"The process in which alpha-ketoglutarate is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:11013234","PMID:20371607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoglutarate transport","termid":"GO:0015742"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"mitochondrial alpha-ketoglutarate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990552"],"synonyms":[{"name":"mitochondrial 2-oxoglutarate transmembrane transport","type":"exact"}],"termid":"GO:1990550","terms_by_termid":{"GO:1990550":null}}


id: PBO:0068175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 482","termid":"PBO:0068175"}


id: PBO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B beta subunit (predicted)","termid":"PBO:0001109"}


id: MONDO:0014548
data:
  {"annotated_genes":["SJAG_04781","SJAG_04901"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85773,85774],"is_not":false,"summary":null,"term":"MONDO:0014548"}]},"cv_name":"mondo","definition":"Any long QT syndrome in which the cause of the disease is a mutation in the CALM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4015671","GARD:16073","MEDGEN:864108","NCIT:C177534","DOID:0110655","OMIM:616247"],"synonyms":[{"name":"CALM1 long QT syndrome","type":"exact"},{"name":"LQT14","type":"exact"},{"name":"long QT syndrome 14","type":"exact"},{"name":"long QT syndrome caused by mutation in CALM1","type":"exact"},{"name":"long QT syndrome type 14","type":"exact"}],"termid":"MONDO:0014548","terms_by_termid":{"MONDO:0014548":null},"xrefs":{"Monarch":{"xref_id":"0014548"}}}


id: MONDO:0001768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"stenosis of lacrimal passage","secondary_identifiers":["DOID:13654","UMLS:C0155245","ICD9:375.53","SCTID:81345003","MEDGEN:509870"],"synonyms":[{"name":"stenosis of lacrimal canaliculi","type":"exact"}],"termid":"MONDO:0001768","xrefs":{"Monarch":{"xref_id":"0001768"}}}


id: MONDO:0859285
data:
  {"annotated_genes":["SJAG_02750"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86077],"is_not":false,"summary":null,"term":"MONDO:0859285"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02750":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, short stature, and speech delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1823984","OMIM:620027","UMLS:C5774211"],"termid":"MONDO:0859285","terms_by_termid":{"MONDO:0859285":null},"xrefs":{"Monarch":{"xref_id":"0859285"}}}


id: GO:0038134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to an epidermal growth factor receptor (EGFR/ERBB1) on the surface of a cell, followed by transmission of the signal by a heterodimeric complex of ERBB2 and EGFR. ERBB2, which does not bind any known ligand, is activated through formation of a heterodimer with another ligand-activated ERBB family member such as EGFR.","definition_xrefs":["GOC:signaling","PMID:16460914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"is_a","term_name":"ERBB2 signaling pathway","termid":"GO:0038128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ERBB2-EGFR signaling pathway","synonyms":[{"name":"EGFR-HER2 signaling pathway","type":"exact"},{"name":"ERBB2-EGFR signalling pathway","type":"exact"}],"termid":"GO:0038134"}


id: MONDO:1012056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"degenerative myelopathy, non-human animal","termid":"MONDO:1011839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative myelopathy, dog","secondary_identifiers":["OMIA:000263-9615"],"termid":"MONDO:1012056","xrefs":{"Monarch":{"xref_id":"1012056"}}}


id: PBO:0080582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR5B divergent transcript","termid":"PBO:0080582"}


id: PBO:0077171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tousled like kinase 2 pseudogene 2","termid":"PBO:0077171"}


id: GO:0004703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + G protein-coupled receptor = ADP + G protein-coupled receptor phosphate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0004672","GO:0016740","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled receptor kinase activity","secondary_identifiers":["RHEA:12008","GO:0004678","EC:2.7.11.16"],"synonyms":[{"name":"ATP:G-protein-coupled receptor phosphotransferase activity","type":"related"},{"name":"G protein coupled receptor phosphorylating protein kinase activity","type":"exact"},{"name":"G-protein coupled receptor kinase activity","type":"related"},{"name":"G-protein-coupled receptor phosphorylating protein kinase activity","type":"exact"},{"name":"GPCR kinase activity","type":"related"},{"name":"GPCR phosphorylating protein kinase activity","type":"exact"},{"name":"GPCRK","type":"related"},{"name":"GRK4","type":"related"},{"name":"GRK5","type":"related"},{"name":"GRK6","type":"related"},{"name":"STK16","type":"related"}],"termid":"GO:0004703"}


id: PBO:0080927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 5","termid":"PBO:0080927"}


id: PATO:0000668
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000668 mass_quantity (obsolete PATO:0000668)","termid":"PATO:0000668"}


id: FYPO:0002944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal when the cell is in G0 phase. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during G0","termid":"FYPO:0003864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during G0","synonyms":[{"name":"decreased RNA accumulation during G0","type":"related"},{"name":"decreased RNA level during cell quiescence","type":"exact"},{"name":"decreased RNA level during quiescence","type":"exact"},{"name":"decreased transcript level during G0","type":"exact"},{"name":"reduced RNA level during G0","type":"exact"}],"termid":"FYPO:0002944"}


id: PBO:0055378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2808","termid":"PBO:0055378"}


id: PATO:0000785
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000785 muscle function value (obsolete PATO:0000785)","termid":"PATO:0000785"}


id: PBO:0046186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELMO1 antisense RNA 1","termid":"PBO:0046186"}


id: PBO:0046951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 74 member A6","termid":"PBO:0046951"}


id: MONDO:0012327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 18p11.32-p11.31.","definition_xrefs":["PMID:15637723","DOID:0110503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 46","secondary_identifiers":["UMLS:C1864815","MEDGEN:355302","OMIM:609647","MESH:C566459","GARD:22615"],"synonyms":[{"name":"DFNB46","type":"narrow"},{"name":"autosomal recessive deafness 46","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 46","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 46","type":"narrow"},{"name":"deafness, autosomal recessive 46","type":"narrow"}],"termid":"MONDO:0012327","xrefs":{"Monarch":{"xref_id":"0012327"}}}


id: PR:O43044
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup120 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup120 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.16c","synonyms":[{"name":"Spom972h-nup120","type":"exact"},{"name":"nuclear pore protein nup120 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43044"}


id: PBO:0003843
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.99.1.3","termid":"PBO:0003843"}


id: PBO:0063679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 3","termid":"PBO:0063679"}


id: PBO:0079841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-5 netrin receptor D","termid":"PBO:0079841"}


id: PBO:0083788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in rRNA maturation and ribosomal assembly; involved in the processing of pre-rRNA and the assembly of the 60S ribosomal subunit; interacts with ribosomal protein L11; localizes predominantly to the nucleolus; constituent of 66S pre-ribosomal particles","termid":"PBO:0083788"}


id: PBO:0061963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 42","termid":"PBO:0061963"}


id: PBO:0081584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 512","termid":"PBO:0081584"}


id: PBO:0040003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 14 effector protein","termid":"PBO:0040003"}


id: MONDO:0022623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK4 linked melanoma","termid":"MONDO:0022623","xrefs":{"Monarch":{"xref_id":"0022623"}}}


id: MONDO:1040038
data:
  {"annotated_genes":["SJAG_01897"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014372"}]},"cv_name":"mondo","definition":"Any retinopathy caused by variants in the TTLL5 gene.","definition_xrefs":["PMID:27162334","PMID:34203883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"TTLL5-related retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"TTLL5-related retinopathy","type":"exact"}],"termid":"MONDO:1040038","terms_by_termid":{"MONDO:0014372":null},"xrefs":{"Monarch":{"xref_id":"1040038"}}}


id: PR:O42955
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr3 gene.","definition_xrefs":["UniProtKB:O42955","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 3, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.07c","synonyms":[{"name":"Spom972h-ppr3","type":"exact"},{"name":"mitochondrial group I intron splicing factor dmr1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42955"}


id: MONDO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the temporal lobe.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral hemisphere cancer","termid":"MONDO:0002731"},{"relation_name":"is_a","term_name":"neoplasm of temporal lobe","termid":"MONDO:0021372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"temporal lobe cancer","secondary_identifiers":["ICD10CM:C71.2","DOID:2135","UMLS:C0153636","ICD9:191.2","MEDGEN:509347","SCTID:363468009"],"synonyms":[{"name":"cancer of temporal lobe","type":"exact"},{"name":"malignant neoplasm of temporal lobe","type":"exact"},{"name":"malignant temporal lobe neoplasm","type":"exact"},{"name":"temporal lobe cancer","type":"exact"},{"name":"temporal lobe neoplasm","type":"related"},{"name":"tumour of temporal lobe","type":"related"}],"termid":"MONDO:0002218","xrefs":{"Monarch":{"xref_id":"0002218"}}}


id: PR:Q9Y7M4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03014","PRO:DNx","PANTHER:PTHR13110:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.05c","secondary_identifiers":["UniProtKB:Q9Y7M4"],"synonyms":[{"name":"Spom972h-LSM3","type":"exact"}],"termid":"PR:Q9Y7M4"}


id: GO:0102363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isoscopoletin + S-adenosyl-L-methionine = scoparone + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isoscopoletin-O-methyltransferase activity (obsolete GO:0102363)","termid":"GO:0102363"}


id: GO:0075037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of symbiont appressorium maturation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of appressorium maturation (obsolete GO:0075037)","synonyms":[{"name":"positive regulation maturation of appressorium on or near host","type":"exact"},{"name":"positive regulation of appressorium maturation on or near host","type":"related"}],"termid":"GO:0075037"}


id: PBO:0070692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8 pseudogene 1","termid":"PBO:0070692"}


id: MONDO:1010002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myoclonus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus, non-human animal","secondary_identifiers":["OMIA:000689"],"termid":"MONDO:1010002","xrefs":{"Monarch":{"xref_id":"1010002"}}}


id: PBO:0070015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1312, pseudogene","termid":"PBO:0070015"}


id: PBO:0075210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin alpha 1","termid":"PBO:0075210"}


id: PBO:0042743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein Q","termid":"PBO:0042743"}


id: PBO:0083744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the outer kinetochore MIND complex; joins kinetochore subunits contacting DNA to those contacting microtubules; required for kinetochore bi-orientation and accurate chromosome segregation; complex consists of Mtw1p, Nnf1p, Nsl1p and Dsn1p; homologous to metazoan CENP-H proteins","termid":"PBO:0083744"}


id: GO:0030272
data:
  {"annotated_genes":["SJAG_01616"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72913],"is_not":false,"summary":null,"term":"GO:0030272"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-formyltetrahydrofolate + ATP = 5,10-methenyltetrahydrofolate + ADP + H+ + phosphate.","definition_xrefs":["EC:6.3.3.2","RHEA:10488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo-ligase activity","termid":"GO:0016882"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-formyltetrahydrofolate cyclo-ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:5-FORMYL-THF-CYCLO-LIGASE-RXN","KEGG_REACTION:R02301","GO:0019006","Reactome:R-HSA-6801342"],"synonyms":[{"name":"5,10-methenyltetrahydrofolate synthetase activity","type":"related"},{"name":"5-Formyltetrahydrofolate cyclodehydrase activity","type":"related"},{"name":"5-formyltetrahydrofolate cyclo-ligase (ADP-forming)","type":"related"},{"name":"5-formyltetrahydrofolate cyclodehydrase","type":"broad"},{"name":"formyltetrahydrofolic cyclodehydrase activity","type":"related"},{"name":"methenyl-THF synthetase activity","type":"related"}],"termid":"GO:0030272","terms_by_termid":{"GO:0030272":null}}


id: PBO:0034367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-develops_in","termid":"PBO:0034367"}


id: PBO:0061656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear GTPase, germinal center associated","termid":"PBO:0061656"}


id: GO:0035487
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98505],"is_not":false,"summary":null,"term":"GO:0035487"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a T/T mispair.","definition_xrefs":["GOC:jh","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"thymine/thymine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"T/T mispair binding","type":"exact"}],"termid":"GO:0035487","terms_by_termid":{"GO:0035487":null}}


id: MONDO:0858926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that is characterized by developmental delay, hypotrophy, and dysmorphic features and that has material basis in homozygous ultra-rare REV3L variant (T2753R).","definition_xrefs":["DOID:0081264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay, hypotrophy, and dysmorphic features without moebius syndrome","termid":"MONDO:0858926","xrefs":{"Monarch":{"xref_id":"0858926"}}}


id: MONDO:0033204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 37","secondary_identifiers":["DOID:0080266","MEDGEN:1615746","UMLS:C4539798","OMIM:617577","GARD:16239"],"synonyms":[{"name":"CILD37","type":"related"},{"name":"ciliary dyskinesia, primary, 37","type":"exact"},{"name":"ciliary dyskinesia, primary, 37, with or without situs inversus","type":"related"},{"name":"primary ciliary dyskinesia 37","type":"related"}],"termid":"MONDO:0033204","xrefs":{"Monarch":{"xref_id":"0033204"}}}


id: PBO:0080911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta","termid":"PBO:0080911"}


id: GO:0045265
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the membrane-associated Fo proteins; is thought to prevent futile rotation of the catalytic core.","definition_xrefs":["PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete proton-transporting ATP synthase, stator stalk (obsolete GO:0045265)","synonyms":[{"name":"hydrogen-transporting ATP synthase, stator stalk","type":"exact"}],"termid":"GO:0045265"}


id: GO:0008885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gamma-L-glutamyl-L-cysteinyl-glycine + spermidine + ATP = N1-(gamma-L-glutamyl-L-cysteinyl-glycyl)-spermidine + ADP + phosphate.","definition_xrefs":["EC:6.3.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"glutathionylspermidine synthase activity","secondary_identifiers":["MetaCyc:GSPSYN-RXN","RHEA:21272"],"synonyms":[{"name":"GSP synthetase activity","type":"related"},{"name":"gamma-L-glutamyl-L-cysteinyl-glycine:spermidine ligase (ADP-forming) [spermidine is numbered so that atom N-1 is in the amino group of the aminopropyl part of the molecule]","type":"related"},{"name":"gamma-L-glutamyl-L-cysteinyl-glycine:spermidine ligase (ADP-forming) activity","type":"related"},{"name":"glutathione:spermidine ligase (ADP-forming) activity","type":"related"},{"name":"glutathionylspermidine synthetase activity","type":"related"}],"termid":"GO:0008885"}


id: PR:O94376
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srb7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.10","synonyms":[{"name":"Spom972h-srb7","type":"exact"},{"name":"mediator complex subunit 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94376"}


id: PBO:0052286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDSR divergent transcript","termid":"PBO:0052286"}


id: PBO:0040613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR/IMD domain containing adaptor protein 2 like 2","termid":"PBO:0040613"}


id: GO:0001300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process associated with progression of the cell from its inception to the end of its lifespan that occurs when the cell is in a non-dividing, or quiescent, state.","definition_xrefs":["PMID:12044934","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete chronological cell aging (obsolete GO:0001300)","synonyms":[{"name":"chronological cell ageing","type":"exact"}],"termid":"GO:0001300"}


id: GO:0075331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont arbuscule formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of formation of structure involved in a symbiotic process","termid":"GO:0044147"},{"relation_name":"is_a","term_name":"regulation of arbuscule formation for nutrient acquisition from host","termid":"GO:0075329"},{"relation_name":"negatively_regulates","term_name":"formation of arbuscule for nutrient acquisition","termid":"GO:0075328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of arbuscule formation for nutrient acquisition from host","termid":"GO:0075331"}


id: PBO:0078030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 20","termid":"PBO:0078030"}


id: GO:0007342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding and fusion of a sperm, with the plasma membrane of the oocyte as part of the process of single fertilization. In sperm with flagella, binding occurs at the posterior (post-acrosomal) region of the sperm head.","definition_xrefs":["GOC:jl","PMID:17644969","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"plasma membrane fusion","termid":"GO:0045026"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"fusion of sperm to egg plasma membrane involved in single fertilization","synonyms":[{"name":"sperm-oocyte fusion","type":"narrow"}],"termid":"GO:0007342"}


id: PBO:0082822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved nuclear protein that interacts with GTP-Gsp1p; stimulates nucleotide release from Gsp1p; involved in nuclear protein import; nucleotide release is inhibited by Yrb1p","termid":"PBO:0082822"}


id: PBO:0088359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph4","termid":"PBO:0088359"}


id: MONDO:0100316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 1","secondary_identifiers":["DOID:0110644","MedDRA:10039211","MEDGEN:1641146","OMIM:192500","NCIT:C85049","UMLS:C4551647","SCTID:20852007"],"synonyms":[{"name":"LQT1","type":"exact"},{"name":"long QT syndrome 1","type":"exact"},{"name":"long QT syndrome 1, acquired, susceptibility to","type":"related"},{"name":"long QT syndrome 1/2, digenic","type":"related"},{"name":"long QT syndrome type 1","type":"exact"},{"name":"ventricular fibrillation with prolonged QT interval","type":"exact"}],"termid":"MONDO:0100316","xrefs":{"Monarch":{"xref_id":"0100316"}}}


id: PBO:0077929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 2","termid":"PBO:0077929"}


id: MONDO:0016412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Peripheral hypothyroidism is a type of permanent congenital hypothyroidism, a permanent thyroid hormone deficiency that is present from birth, that results from peripheral defects in thyroid hormone metabolism.","definition_xrefs":["Orphanet:226310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permanent congenital hypothyroidism","termid":"MONDO:0016408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral hypothyroidism","secondary_identifiers":["MEDGEN:1843430","UMLS:C5704669"],"termid":"MONDO:0016412","xrefs":{"Monarch":{"xref_id":"0016412"}}}


id: MONDO:0005377
data:
  {"annotated_genes":["SJAG_04621","SJAG_04148","SJAG_04017","SJAG_00864","SJAG_00933","SJAG_04000","SJAG_01374","SJAG_00093","SJAG_03986","SJAG_03361","SJAG_01185","SJAG_04013","SJAG_03182","SJAG_00471"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013836"},{"annotations":[85450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[86255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014752"},{"annotations":[86179,86180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014817"},{"annotations":[86178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014818"},{"annotations":[86739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032580"},{"annotations":[86740,86741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032581"},{"annotations":[86737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032582"},{"annotations":[86264,86265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026726"},{"annotations":[85367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014099"},{"annotations":[86184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014257"}]},"cv_name":"mondo","definition":"A collection of symptoms that include severe edema, proteinuria, and hypoalbuminemia; it is indicative of renal dysfunction.","definition_xrefs":["NCIT:C34845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"nephrosis","termid":"MONDO:0002331"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00471":null,"SJAG_00864":null,"SJAG_00933":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_03182":null,"SJAG_03361":null,"SJAG_03986":null,"SJAG_04000":null,"SJAG_04013":null,"SJAG_04017":null,"SJAG_04148":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1184209951","ICD9:581","MEDGEN:10308","DOID:1184","ICD9:581.9","MESH:D009404","NANDO:2100009","SCTID:52254009","UMLS:C0027726","EFO:0004255"],"synonyms":[{"name":"nephrosis","type":"related"},{"name":"nephrotic syndrome","type":"exact"},{"name":"nephrotic syndromes","type":"exact"},{"name":"syndrome, nephrotic","type":"exact"},{"name":"syndromes, nephrotic","type":"exact"}],"termid":"MONDO:0005377","terms_by_termid":{"MONDO:0011303":null,"MONDO:0013836":null,"MONDO:0014099":null,"MONDO:0014257":null,"MONDO:0014752":null,"MONDO:0014817":null,"MONDO:0014818":null,"MONDO:0026726":null,"MONDO:0032580":null,"MONDO:0032581":null,"MONDO:0032582":null},"xrefs":{"Monarch":{"xref_id":"0005377"}}}


id: SO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A double-helical region of nucleic acid formed by base-pairing between adjacent (inverted) complementary sequences.","direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_sequence_secondary_structure","termid":"SO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem_loop","secondary_identifiers":["SO:0000019","http://en.wikipedia.org/wiki/Stem_loop"],"synonyms":[{"name":"INSDC_feature:stem_loop","type":"exact"},{"name":"RNA_hairpin_loop","type":"exact"},{"name":"stem loop","type":"exact"},{"name":"stem-loop","type":"exact"}],"termid":"SO:0000313"}


id: PBO:0011083
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate Km, ATP Km 1.9 mM","termid":"PBO:0011083"}


id: PBO:0064636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate amidotransferase pseudogene 2","termid":"PBO:0064636"}


id: MONDO:0013569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in homozygous or compound heterozygous mutation in the WDR35 gene on chromosome 2p21.1.","definition_xrefs":["PMID:21473986","DOID:0110090","PMID:17935248"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"asphyxiating thoracic dystrophy 3","termid":"MONDO:0013127"},{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 7 with or without polydactyly","secondary_identifiers":["MEDGEN:481422","UMLS:C3279792","Orphanet:498497","GARD:15756","OMIM:614091"],"synonyms":[{"name":"SRPS5","type":"exact"},{"name":"SRTD7","type":"exact"},{"name":"short rib-polydactyly syndrome type 5","type":"exact"},{"name":"short rib-polydactyly syndrome type V","type":"exact"},{"name":"short rib-polydactyly syndrome, type 5","type":"exact"},{"name":"short-rib thoracic dysplasia 7 with or without polydactyly","type":"exact"}],"termid":"MONDO:0013569","xrefs":{"Monarch":{"xref_id":"0013569"}}}


id: PBO:0058706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6834","termid":"PBO:0058706"}


id: GO:0044780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a bacterial-type flagellum, a motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope which functions in cell motility.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection assembly","termid":"GO:0030031"},{"relation_name":"is_a","term_name":"bacterial-type flagellum organization","termid":"GO:0044781"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"bacterial-type flagellum assembly","synonyms":[{"name":"bacterial flagellum assembly","type":"exact"}],"termid":"GO:0044780"}


id: GO:0021535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that will reside in the hindbrain.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration in hindbrain","termid":"GO:0021535"}


id: GO:0008388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced [NADPH-hemoprotein reductase] + O2 + a steroid = oxidized [NADPH-hemoprotein reductase] + H2O + H+ + 15alpha-hydroxy steroid.","definition_xrefs":["PMID:2703500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"steroid 15-alpha-hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP2A4","type":"narrow"}],"termid":"GO:0008388"}


id: PBO:0030897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_regulation_phenotype_during_vegetative_growth","termid":"PBO:0030897"}


id: RO:0002227
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of parasite-of in which the parasite that cannot complete its life cycle without a host.","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obligate_parasite_of","termid":"RO:0002227"}


id: PATO:0001639
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality inhering in a process by virtue of the bearer's being non-essential or dispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity of occurrent","termid":"PATO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unnecessary (occurrent)","termid":"PATO:0001639"}


id: MONDO:1010294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rheumatoid arthritis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder, non-human animal","termid":"MONDO:1011309"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"},{"relation_name":"is_a","term_name":"autoimmune disease, non-human animal","termid":"MONDO:1012985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rheumatoid arthritis, non-human animal","secondary_identifiers":["OMIA:000067"],"termid":"MONDO:1010294","xrefs":{"Monarch":{"xref_id":"1010294"}}}


id: GO:1902878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of BMP signaling pathway involved in spinal cord association neuron specification.","definition_xrefs":["GO_REF:0000058","PMID:21730158","GOC:TermGenie","GOC:mr"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of BMP signaling pathway involved in spinal cord association neuron specification (obsolete GO:1902878)","synonyms":[{"name":"regulation of BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"regulation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"regulation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"}],"termid":"GO:1902878"}


id: PBO:0015709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteinase B inhibitor Pbi2","termid":"PBO:0015709"}


id: GO:0030033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvillus organization","termid":"GO:0032528"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"microvillus assembly","synonyms":[{"name":"microvillus biogenesis","type":"related"}],"termid":"GO:0030033"}


id: PBO:0055894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 14B","termid":"PBO:0055894"}


id: PBO:0065116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCI pseudogene 1","termid":"PBO:0065116"}


id: GO:0005175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CD27, a receptor found on the surface of T cells and some B cells and NK cells.","definition_xrefs":["GOC:jl","ISBN:0120781859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor receptor superfamily binding","termid":"GO:0032813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CD27 receptor binding","termid":"GO:0005175"}


id: GO:0032780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of an ATP-dependent activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"},{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ATP-dependent activity","synonyms":[{"name":"down regulation of ATPase activity","type":"exact"},{"name":"down-regulation of ATPase activity","type":"exact"},{"name":"downregulation of ATPase activity","type":"exact"},{"name":"inhibition of ATPase activity","type":"narrow"},{"name":"negative regulation of ATPase activity","type":"exact"},{"name":"negative regulation of adenosinetriphosphatase activity","type":"exact"}],"termid":"GO:0032780"}


id: PBO:0053979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1291","termid":"PBO:0053979"}


id: PBO:0052587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 5","termid":"PBO:0052587"}


id: PBO:0062025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily M member 7","termid":"PBO:0062025"}


id: GO:0004843
data:
  {"annotated_genes":["SJAG_02419","SJAG_00795","SJAG_04538","SJAG_00742","SJAG_02341","SJAG_01528","SJAG_00966","SJAG_01312","SJAG_01768","SJAG_00644","SJAG_03429","SJAG_00764","SJAG_04215","SJAG_04651","SJAG_00546","SJAG_04497","SJAG_03752","SJAG_02774","SJAG_01481","SJAG_02244","SJAG_00087","SJAG_03686","SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62876,64147,66167,67397,69605,70432,72315,72908,73046,74109,74117,74529,75483,76721,76765,76862,77431,77768,78419,80703,93754,98340,114613],"is_not":false,"summary":null,"term":"GO:0004843"}]},"cv_name":"molecular_function","definition":"An thiol-dependent isopeptidase activity that cleaves ubiquitin from a target protein to which it is conjugated.","definition_xrefs":["GOC:jh2","PMID:30783221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00546":null,"SJAG_00573":null,"SJAG_00644":null,"SJAG_00742":null,"SJAG_00764":null,"SJAG_00795":null,"SJAG_00966":null,"SJAG_01312":null,"SJAG_01481":null,"SJAG_01528":null,"SJAG_01768":null,"SJAG_02244":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_02774":null,"SJAG_03429":null,"SJAG_03686":null,"SJAG_03752":null,"SJAG_04215":null,"SJAG_04497":null,"SJAG_04538":null,"SJAG_04651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016787","GO:0008233","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cysteine-type deubiquitinase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5696600","Reactome:R-HSA-6781764","Reactome:R-HSA-5690152","Reactome:R-HSA-6807118","Reactome:R-HSA-9033478","Reactome:R-HSA-6781779","Reactome:R-HSA-6782069","Reactome:R-HSA-8862184","Reactome:R-HSA-5696968","Reactome:R-HSA-8853503","Reactome:R-HSA-8865182","Reactome:R-HSA-5696960","Reactome:R-HSA-2179291","Reactome:R-HSA-6781897","Reactome:R-HSA-5690157","Reactome:R-HSA-8853529","Reactome:R-HSA-6782628","Reactome:R-HSA-6807206","Reactome:R-HSA-8853515","Reactome:R-HSA-8869456","Reactome:R-HSA-9033491","Reactome:R-HSA-5688837","Reactome:R-HSA-6782820","GO:0036459","Reactome:R-HSA-5688797","Reactome:R-HSA-5696914","Reactome:R-HSA-6782106","Reactome:R-HSA-6786171","Reactome:R-HSA-5653770","Reactome:R-HSA-8986083","Reactome:R-HSA-3215310","Reactome:R-HSA-5696872","Reactome:R-HSA-5690080","Reactome:R-HSA-5696997","Reactome:R-HSA-8853514","Reactome:R-HSA-5697009","Reactome:R-HSA-5696947","Reactome:R-HSA-5690196","Reactome:R-HSA-5689972","Reactome:R-HSA-5691381","Reactome:R-HSA-5696564","Reactome:R-HSA-5690790","Reactome:R-HSA-3215295","Reactome:R-HSA-5655466","Reactome:R-HSA-5690319","Reactome:R-HSA-5696534","Reactome:R-HSA-6783177","Reactome:R-HSA-870437","Reactome:R-HSA-8873946","Reactome:R-HSA-8875443","Reactome:R-HSA-4641236","Reactome:R-HSA-5696958","Reactome:R-HSA-5696605","Reactome:R-HSA-3640872","Reactome:R-HSA-5689950","Reactome:R-HSA-5696465","Reactome:R-HSA-9653514","Reactome:R-HSA-5690159","EC:3.4.19.12","Reactome:R-HSA-5690759","Reactome:R-HSA-6781814","Reactome:R-HSA-1358795","Reactome:R-HSA-5696627","Reactome:R-HSA-5689973","Reactome:R-HSA-5696945"],"synonyms":[{"name":"UBP","type":"narrow"},{"name":"UCH2","type":"narrow"},{"name":"deubiquitinase","type":"broad"},{"name":"deubiquitinase activity","type":"broad"},{"name":"deubiquitinating enzyme","type":"broad"},{"name":"deubiquitylase","type":"broad"},{"name":"thiol-dependent deubiquitinase","type":"exact"},{"name":"thiol-dependent ubiquitin-specific protease activity","type":"exact"},{"name":"thiol-dependent ubiquitinyl hydrolase activity","type":"exact"},{"name":"ubiquitin C-terminal hydrolase","type":"related"},{"name":"ubiquitin hydrolase activity","type":"broad"},{"name":"ubiquitin-specific protease activity","type":"broad"},{"name":"ubiquitinyl hydrolase 1 activity","type":"narrow"},{"name":"ubiquitinyl hydrolase activity","type":"broad"}],"termid":"GO:0004843","terms_by_termid":{"GO:0004843":null}}


id: MONDO:0007065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenosine deaminase, elevated, hemolytic anemia due to (obsolete MONDO:0007065)","termid":"MONDO:0007065","xrefs":{"Monarch":{"xref_id":"0007065"}}}


id: PR:O13839
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fin1 gene.","definition_xrefs":["UniProtKB:O13839","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2-specific protein kinase fin1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19E9.02","synonyms":[{"name":"Spom972h-fin1","type":"exact"}],"termid":"PR:O13839"}


id: PBO:0084455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase; involved in adding the 4th and 5th mannose residues of O-linked glycans","termid":"PBO:0084455"}


id: PR:Q7LKZ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lvs1 gene.","definition_xrefs":["UniProtKB:Q7LKZ7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige protein homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.06c","synonyms":[{"name":"Spom972h-lvs1","type":"exact"}],"termid":"PR:Q7LKZ7"}


id: PBO:0089190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD family chromatin remodeller Hrp3","termid":"PBO:0089190"}


id: GO:0021801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial migration of neuronal or glial precursor cells along radial glial cells during the development of the cerebral cortex.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:cls","PMID:12626695","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex radially oriented cell migration","termid":"GO:0021799"},{"relation_name":"is_a","term_name":"telencephalon glial cell migration","termid":"GO:0022030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex radial glia-guided migration","synonyms":[{"name":"cerebral cortex radial glia guided migration","type":"exact"},{"name":"cerebral cortex radial glia-dependent cell migration","type":"exact"},{"name":"glial-guided locomotion","type":"related"}],"termid":"GO:0021801"}


id: PBO:0051137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-11","termid":"PBO:0051137"}


id: PBO:0045226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C14","termid":"PBO:0045226"}


id: MONDO:0600008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that occurs after therapeutic infusion of antibodies into the blood and is characterized by nausea, headache, tachycardia, hypotension, rash, and shortness of breath. It is caused by the release of cytokines from the cells that are targeted by the antibodies. Most patients experience a mild to moderate reaction; however, the reaction may be severe and life-threatening.","definition_xrefs":["NCIT:C78251","PMID:24876563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cytokine release syndrome","secondary_identifiers":["UMLS:C0948245","MEDGEN:215297","MESH:D000080424"],"synonyms":[{"name":"CRS","type":"exact"},{"name":"cytokine storm","type":"exact"},{"name":"cytokine-associated toxicity","type":"exact"}],"termid":"MONDO:0600008","xrefs":{"Monarch":{"xref_id":"0600008"}}}


id: PBO:0050771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIV-1 Tat specific factor 1 pseudogene 1","termid":"PBO:0050771"}


id: MONDO:0971031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired metabolic disease that is characterized by the endogenous production of ethanol produced through endogenous fermentation by fungi or bacteria in the gastrointestinal system, oral cavity, or urinary system and typically presents with the signs of alcohol intoxication.","definition_xrefs":["DOID:0081455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"auto-brewery syndrome","secondary_identifiers":["MEDGEN:1853294","UMLS:C4552195"],"termid":"MONDO:0971031","xrefs":{"Monarch":{"xref_id":"0971031"}}}


id: PBO:0073535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing kinase binding protein 1","termid":"PBO:0073535"}


id: PBO:0041479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 80","termid":"PBO:0041479"}


id: MONDO:0018252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"focal palmoplantar keratoderma with joint keratoses","secondary_identifiers":["MEDGEN:1667811","GARD:17596","UMLS:C4755302","Orphanet:370002"],"termid":"MONDO:0018252","xrefs":{"Monarch":{"xref_id":"0018252"}}}


id: GO:0002585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of peptide antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of peptide antigen","synonyms":[{"name":"activation of antigen processing and presentation of peptide antigen","type":"narrow"},{"name":"positive regulation of peptide antigen processing and presentation","type":"exact"},{"name":"stimulation of antigen processing and presentation of peptide antigen","type":"narrow"},{"name":"up regulation of antigen processing and presentation of peptide antigen","type":"exact"},{"name":"up-regulation of antigen processing and presentation of peptide antigen","type":"exact"},{"name":"upregulation of antigen processing and presentation of peptide antigen","type":"exact"}],"termid":"GO:0002585"}


id: MONDO:0043251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, slow growing, and painless hamartomatous tumor occurring in tooth-bearing areas of the jaws. According to the presence or absence of tooth-like structures, it is classified as complex type or compound type. Odontoma of complex type is characterized by the presence of enamel and dentin and the absence of tooth-like structures. It is treated with local excision. If it is incompletely removed, it may recur. Odontoma of compound type is characterized by the presence of tooth-like structures. It is treated by local excision. Recurrences have not been reported.","definition_xrefs":["NCIT:C3287"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"odontogenic neoplasm","termid":"MONDO:0021192"},{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odontoma","secondary_identifiers":["UMLS:C0028882","ICDO:9280/0","MESH:D009810","MEDGEN:45181"],"synonyms":[{"name":"ameloblastic fibro-odontoma","type":"related"},{"name":"ameloblastic fibro-odontomas","type":"related"},{"name":"compound odontoma","type":"related"},{"name":"compound odontomas","type":"related"},{"name":"fibro odontoma","type":"related"},{"name":"fibro odontoma, ameloblastic","type":"related"},{"name":"fibro-odontoma","type":"exact"},{"name":"fibro-odontoma, ameloblastic","type":"related"},{"name":"fibro-odontomas","type":"related"},{"name":"fibro-odontomas, ameloblastic","type":"related"},{"name":"fibroodontoma","type":"exact"},{"name":"fibroodontomas","type":"related"},{"name":"odontoma","type":"exact"},{"name":"odontoma, benign","type":"exact"},{"name":"odontoma, compound","type":"related"},{"name":"odontomas","type":"related"},{"name":"odontomas, compound","type":"related"}],"termid":"MONDO:0043251","xrefs":{"Monarch":{"xref_id":"0043251"}}}


id: PR:O94647
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk24, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.07c","synonyms":[{"name":"Spom972h-ppk24","type":"exact"},{"name":"meiotically up-regulated gene 29 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94647"}


id: PBO:0073821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 1","termid":"PBO:0073821"}


id: MONDO:0000237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete erysipeloid (obsolete MONDO:0000237)","termid":"MONDO:0000237","xrefs":{"Monarch":{"xref_id":"0000237"}}}


id: MONDO:0004266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anal adenocarcinoma arising from the epithelium of the anal glands. The overlying anal mucosa does not show evidence of neoplastic changes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anus adenocarcinoma","termid":"MONDO:0002652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"anal gland adenocarcinoma","secondary_identifiers":["ICDO:8215/3","DOID:7531","NCIT:C5609","ONCOTREE:AGA","MEDGEN:220409","UMLS:C1266027"],"synonyms":[{"name":"adenocarcinoma of anal ducts","type":"exact"},{"name":"adenocarcinoma of anal gland","type":"related"},{"name":"adenocarcinoma of the anal gland","type":"exact"},{"name":"anal glands adenocarcinoma","type":"exact"}],"termid":"MONDO:0004266","xrefs":{"Monarch":{"xref_id":"0004266"}}}


id: PBO:0053296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM zinc finger domain containing 2","termid":"PBO:0053296"}


id: GO:0062108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to a non-growing cell tip.","definition_xrefs":["PMID:18328707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to non-growing cell tip","termid":"GO:0062107"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell tip","termid":"GO:1903067"},{"relation_name":"negatively_regulates","term_name":"protein localization to non-growing cell tip","termid":"GO:1902487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to non-growing cell tip","termid":"GO:0062108"}


id: PBO:0088884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II accessory factor, Cdc73 family","termid":"PBO:0088884"}


id: PBO:0082593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Citrate synthase, peroxisomal isozyme involved in glyoxylate cycle; catalyzes condensation of acetyl coenzyme A and oxaloacetate to form citrate; expression is controlled by Rtg1p and Rtg2p transcription factors; SCF-Ucc1 regulates level of Cit2p to maintain citrate homeostasis; oxaloacetate-dependent positive feedback loop inhibits Cit2p ubiquitination; CIT2 has a paralog, CIT1, that arose from the whole genome duplication","termid":"PBO:0082593"}


id: GO:0030159
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75656],"is_not":false,"summary":null,"term":"GO:0030159"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that provides a physical support for the assembly of a multiprotein receptor signaling complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling adaptor activity","termid":"GO:0035591"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"signaling receptor complex adaptor activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"receptor signaling complex adaptor activity","type":"exact"},{"name":"receptor signaling complex scaffold activity","type":"exact"},{"name":"receptor signaling complex scaffold protein activity","type":"exact"},{"name":"receptor signalling complex adaptor activity","type":"exact"},{"name":"receptor signalling complex scaffold activity","type":"exact"}],"termid":"GO:0030159","terms_by_termid":{"GO:0030159":null}}


id: GO:0047847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyuridine + phosphate = 2-deoxy-alpha-D-ribose 1-phosphate + uracil.","definition_xrefs":["RHEA:22824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-nucleoside phosphorylase activity","termid":"GO:0016154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"deoxyuridine phosphorylase activity","secondary_identifiers":["MetaCyc:URA-PHOSPH-RXN"],"termid":"GO:0047847"}


id: GO:1901698
data:
  {"annotated_genes":["SJAG_07000","SJAG_00530","SJAG_03227","SJAG_00126","SJAG_03657","SJAG_01584","SJAG_00931","SJAG_04384","SJAG_03153","SJAG_00403","SJAG_02244","SJAG_03288","SJAG_01528","SJAG_00941","SJAG_01858","SJAG_02694","SJAG_01709","SJAG_02685","SJAG_00131","SJAG_04904","SJAG_03841","SJAG_01626","SJAG_03345","SJAG_01585","SJAG_05274","SJAG_00948","SJAG_01768","SJAG_01656","SJAG_04612","SJAG_00790","SJAG_00681","SJAG_04583","SJAG_01854","SJAG_03032","SJAG_01134","SJAG_00766","SJAG_05022","SJAG_04063","SJAG_04345","SJAG_01051","SJAG_04429","SJAG_02774","SJAG_00627","SJAG_02539"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87748,102535],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070458"},{"annotations":[98164,79078,89888,101090,71600,88135,103240,71009,78883,70990,91743,74762,108482,112288,75170,98545,71049,73892,79008,79925,95057,108418,76766,93915,105135,78848,71271,116159,116894,95324,79061,105051,117456,107982,72743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036503"},{"annotations":[73543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[77769,78420],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904293"},{"annotations":[79448,75852],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030970"},{"annotations":[93892,96041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen compound stimulus.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00126":null,"SJAG_00131":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00627":null,"SJAG_00681":null,"SJAG_00766":null,"SJAG_00790":null,"SJAG_00931":null,"SJAG_00941":null,"SJAG_00948":null,"SJAG_01051":null,"SJAG_01134":null,"SJAG_01528":null,"SJAG_01584":null,"SJAG_01585":null,"SJAG_01626":null,"SJAG_01656":null,"SJAG_01709":null,"SJAG_01768":null,"SJAG_01854":null,"SJAG_01858":null,"SJAG_02244":null,"SJAG_02539":null,"SJAG_02685":null,"SJAG_02694":null,"SJAG_02774":null,"SJAG_03032":null,"SJAG_03153":null,"SJAG_03227":null,"SJAG_03288":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_03841":null,"SJAG_04063":null,"SJAG_04345":null,"SJAG_04384":null,"SJAG_04429":null,"SJAG_04583":null,"SJAG_04612":null,"SJAG_04904":null,"SJAG_05022":null,"SJAG_05274":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitrogen compound","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"response to nitrogen molecular entity","type":"exact"}],"termid":"GO:1901698","terms_by_termid":{"GO:0030970":null,"GO:0031990":null,"GO:0036503":null,"GO:0070458":null,"GO:0097466":null,"GO:1904293":null}}


id: MONDO:0024278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the rectum and colon.","definition_xrefs":["NCIT:C77952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colitis","termid":"MONDO:0005292"},{"relation_name":"is_a","term_name":"proctitis","termid":"MONDO:0005538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"proctocolitis","secondary_identifiers":["SCTID:418130002","MESH:D011350","MEDGEN:18651","UMLS:C0033247"],"synonyms":[{"name":"colorectum inflammation","type":"exact"},{"name":"inflammation of colorectum","type":"exact"},{"name":"proctocolitis","type":"exact"}],"termid":"MONDO:0024278","xrefs":{"Monarch":{"xref_id":"0024278"}}}


id: PATO:0002238
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved forward or upward.","direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antrorse","termid":"PATO:0002238"}


id: PBO:0038398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of_or_within,_negative_effect","termid":"PBO:0038398"}


id: PBO:0050997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 140","termid":"PBO:0050997"}


id: GO:0035657
data:
  {"annotated_genes":["SJAG_03949","SJAG_04890"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79192,96548],"is_not":false,"summary":null,"term":"GO:0035657"}]},"cv_name":"cellular_component","definition":"A protein complex required for the methylation of a glutamine (Gln) residue in the protein release factor eRF1. In S. cerevisiae, this complex consists of at least Trm112p and Mtq2p.","definition_xrefs":["GOC:rb","PMID:20400505","PMID:17008308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03949":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"eRF1 methyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"eRF1 MTase complex","type":"exact"}],"termid":"GO:0035657","terms_by_termid":{"GO:0035657":null}}


id: PATO:0002282
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility which is relative high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"mobile","termid":"PATO:0000299"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased mobility","termid":"PATO:0002282"}


id: GO:0097314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of the apoptosome, a multisubunit protein complex involved in the signaling phase of the apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003","GO:0023052"],"is_obsolete":false,"name":"apoptosome assembly","synonyms":[{"name":"apoptosome formation","type":"exact"}],"termid":"GO:0097314"}


id: PBO:0063402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL2 pseudogene 1","termid":"PBO:0063402"}


id: PBO:0066079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 7","termid":"PBO:0066079"}


id: FYPO:0000818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of M-factor, the mating pheromone produced by mating type minus cells, released into the growth medium is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of pheromone in growth medium","termid":"FYPO:0000817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"increased concentration of M-factor in growth medium","synonyms":[{"name":"increased accumulation of M-factor in growth medium","type":"related"},{"name":"increased level of M-factor in growth medium","type":"exact"},{"name":"increased release of M-factor into growth medium","type":"related"}],"termid":"FYPO:0000818"}


id: GO:1904271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-proline from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","GOC:kmv","PMID:21097500","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-proline transmembrane transport","termid":"GO:1904555"},{"relation_name":"is_a","term_name":"proline import across plasma membrane","termid":"GO:1905647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"L-proline import across plasma membrane","secondary_identifiers":["GO:1903809"],"synonyms":[{"name":"L-proline import into cell","type":"exact"}],"termid":"GO:1904271"}


id: PBO:0000632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine N5 monooxygenase (predicted)","termid":"PBO:0000632"}


id: FYPO:0009024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing cysteine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"increased cell population growth on cysteine nitrogen source","synonyms":[{"name":"increased growth on cysteine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on cysteine nitrogen source","type":"exact"}],"termid":"FYPO:0009024"}


id: SO:0001488
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The status of a whole genome sequence, where additional work has been performed, using either manual or automated methods, such as gap resolution.","definition_xrefs":["DOI:10.1126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"whole_genome_sequence_status","termid":"SO:0001499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"improved_high_quality_draft","synonyms":[{"name":"improved high quality draft","type":"exact"}],"termid":"SO:0001488"}


id: PBO:0066015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor activity modifying protein 2","termid":"PBO:0066015"}


id: PBO:0110430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VTCN1 pseudogene 1","termid":"PBO:0110430"}


id: MONDO:0020944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection by a variety of fungi, usually through four possible mechanisms: superficial infection producing conjunctivitis, keratitis, or lacrimal obstruction; extension of infection from neighboring structures - skin, paranasal sinuses, nasopharynx; direct introduction during surgery or accidental penetrating trauma; or via the blood or lymphatic routes in patients with underlying mycoses.","definition_xrefs":["MESH:D015821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"eye infectious disorder","termid":"MONDO:0043885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"fungal infection of eye","secondary_identifiers":["MEDGEN:41935","SCTID:31194008","UMLS:C0015405","ICD9:117.9"],"synonyms":[{"name":"EYE INFECT FUNGAL","type":"related"},{"name":"Eye Infection, Fungal","type":"related"},{"name":"Eye Infections, Fungal","type":"related"},{"name":"FUNGAL EYE INFECT","type":"related"},{"name":"Fungal Eye Infection","type":"related"},{"name":"Fungal Eye Infections","type":"related"},{"name":"Fungal Ocular Infection","type":"related"},{"name":"Fungal Ocular Infections","type":"related"},{"name":"Fungal eye infection","type":"related"},{"name":"Fungal infection of eye","type":"related"},{"name":"Infection, Fungal Eye","type":"related"},{"name":"Infection, Fungal Ocular","type":"related"},{"name":"Infection, Ocular Mycotic","type":"related"},{"name":"Infections, Fungal Eye","type":"related"},{"name":"Infections, Fungal Ocular","type":"related"},{"name":"Infections, Ocular Mycotic","type":"related"},{"name":"MYCOTIC INFECT OCULAR","type":"related"},{"name":"Mycoses, Ocular","type":"related"},{"name":"Mycosis, Ocular","type":"related"},{"name":"Mycotic Infection, Ocular","type":"related"},{"name":"Mycotic Infections, Ocular","type":"related"},{"name":"OCULAR INFECT FUNGAL","type":"related"},{"name":"Ocular Infection, Fungal","type":"related"},{"name":"Ocular Infections, Fungal","type":"related"},{"name":"Ocular Mycoses","type":"related"},{"name":"Ocular Mycosis","type":"related"},{"name":"Ocular Mycotic Infection","type":"related"},{"name":"Ocular Mycotic Infections","type":"related"},{"name":"Ocular mycosis","type":"related"},{"name":"Oculomycoses","type":"related"},{"name":"Oculomycosis","type":"related"},{"name":"fungal eye infection","type":"related"},{"name":"fungal infection of eye","type":"exact"},{"name":"ocular mycosis","type":"related"}],"termid":"MONDO:0020944","xrefs":{"Monarch":{"xref_id":"0020944"}}}


id: PBO:0027832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_septum_edging_catabolic_process","termid":"PBO:0027832"}


id: PBO:0003994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit Cdm1","termid":"PBO:0003994"}


id: MONDO:1011991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod dysplasia, non-human animal","secondary_identifiers":["OMIA:001670"],"termid":"MONDO:1011991","xrefs":{"Monarch":{"xref_id":"1011991"}}}


id: MONDO:0019506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Obesity-colitis-hypothyroidism-cardiac hypertrophy-developmental delay syndrome is characterized by precocious obesity, congenital hypothyroidism, neonatal colitis, cardiac hypertrophy, craniosynostosis and developmental delay. It has been described in two brothers, one of whom died within the first month of life. The parents of the two children were nonconsanguineous and in good health, however, the pregnancies were complicated by a maternal HELLP syndrome (Haemolysis, Elevated Liver enzymes and Low Platelets). The mode of inheritance has not yet been clearly established.","definition_xrefs":["Orphanet:88643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity-colitis-hypothyroidism-cardiac hypertrophy-developmental delay syndrome","secondary_identifiers":["SCTID:722051004","GARD:19092","MEDGEN:928548","UMLS:C4302879"],"termid":"MONDO:0019506","xrefs":{"Monarch":{"xref_id":"0019506"}}}


id: PBO:0047696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR2 antisense RNA 1","termid":"PBO:0047696"}


id: GO:1990565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein kinase chaperone complex required for the proper folding, maturation and stabilization of target proteins (mostly signaling protein kinases, some steroid hormone receptors), usually during or immediately after completion of translation. The highly conserved, phosphorylated CDC37-Ser13 (vertebrates) or cdc37-Ser14 (yeast) is essential for complex assembly and target protein binding. CDC37-Ser13 (Ser14) is phosphorylated by Casein kinase II (CK2), which in turn is a target of CDC37 creating a positive feedback loop. Complex binding also prevents rapid ubiquitin-dependent proteosomal degradation of target proteins.","definition_xrefs":["PMID:21855797","PMID:22939624","GOC:bhm","GOC:pad","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"HSP90-CDC37 chaperone complex","termid":"GO:1990565"}


id: PBO:0090406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR2-SEACAT complex/COPII-coated vesicle component/nuclear pore outer ring WD repeat protein Sec13","termid":"PBO:0090406"}


id: SO:0002308
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The ends of a DNA loop where the two strands of DNA are held in close physical proximity. During interphase the anchors of DNA loops are convergently oriented CTCF binding sites.","definition_xrefs":["GREEKC:cl","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_regulatory_module","termid":"SO:0000727"},{"relation_name":"part_of","term_name":"DNA_loop","termid":"SO:0002307"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_loop_anchor","synonyms":[{"name":"DNA loop anchor","type":"exact"}],"termid":"SO:0002308"}


id: MONDO:0014131
data:
  {"annotated_genes":["SJAG_03158"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86370],"is_not":false,"summary":null,"term":"MONDO:0014131"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03158":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615328","Orphanet:363523","UMLS:C3809160","MEDGEN:815490","GARD:17562"],"synonyms":[{"name":"SHAHEEN syndrome","type":"related"},{"name":"SHNS","type":"related"}],"termid":"MONDO:0014131","terms_by_termid":{"MONDO:0014131":null},"xrefs":{"Monarch":{"xref_id":"0014131"}}}


id: MONDO:0006475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A renal cell carcinoma characterized by morphologic features that do not fit easily into one of the other well-defined categories of renal cell carcinoma. Examples of such features include mixtures of morphologic patterns, mucin production, and sarcomatoid morphology.","definition_xrefs":["NCIT:C27892"],"gene_count":0,"genotype_count":0,"name":"obsolete unclassified renal cell carcinoma (obsolete MONDO:0006475)","secondary_identifiers":["ONCOTREE:URCC"],"synonyms":[{"name":"URCC","type":"related"},{"name":"unclassified renal cell cancer","type":"exact"},{"name":"unclassified renal cell carcinoma","type":"exact"}],"termid":"MONDO:0006475","xrefs":{"Monarch":{"xref_id":"0006475"}}}


id: PBO:0002566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein","termid":"PBO:0002566"}


id: PBO:0083420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized gene YNL144C","termid":"PBO:0083420"}


id: PBO:0060230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYADM antisense RNA 2","termid":"PBO:0060230"}


id: PBO:0069018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 262, pseudogene","termid":"PBO:0069018"}


id: FYPO:0002233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable but longer than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable elongated vegetative cell population (obsolete FYPO:0002233)","synonyms":[{"name":"population of viable long cells","type":"exact"},{"name":"viable long vegetative cell population","type":"exact"},{"name":"viable population of elongated vegetative cells","type":"exact"}],"termid":"FYPO:0002233"}


id: SO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element bound by the MADS family of transcription factors with consensus 5'-(C/T)TA(T/A)4TA(G/A)-3'.","definition_xrefs":["PMID:1748287","PMID:7623803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CArG_box","synonyms":[{"name":"CArG box","type":"exact"}],"termid":"SO:0002156"}


id: GO:0048517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of trichome initiation; as in, but not restricted to, the flowering plants (Magnoliophyta, ncbi_taxonomy_id:3398).","definition_xrefs":["GOC:lr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of trichome initiation (sensu Magnoliophyta) (obsolete GO:0048517)","synonyms":[{"name":"positive regulation of trichome initiation (sensu Magnoliophyta)","type":"exact"}],"termid":"GO:0048517"}


id: PR:Q2EEM0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.12 gene.","definition_xrefs":["UniProtKB:Q2EEM0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.12","synonyms":[{"name":"Spom972h-SPAC27E2.12","type":"exact"}],"termid":"PR:Q2EEM0"}


id: GO:1903182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of SUMO ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of SUMO transferase activity (obsolete GO:1903182)","synonyms":[{"name":"regulation of SMT3 conjugating enzyme","type":"exact"},{"name":"regulation of SUMO conjugating enzyme activity","type":"exact"}],"termid":"GO:1903182"}


id: GO:0045934
data:
  {"annotated_genes":["SJAG_00792","SJAG_00410","SJAG_01157","SJAG_02724","SJAG_01068","SJAG_01230","SJAG_04607","SJAG_00573","SJAG_01254","SJAG_00926","SJAG_00290","SJAG_04539","SJAG_04586","SJAG_02370","SJAG_02858","SJAG_03883","SJAG_03696","SJAG_01804","SJAG_03283","SJAG_03143","SJAG_02380","SJAG_00142","SJAG_02444","SJAG_02385","SJAG_02573","SJAG_00861","SJAG_02104","SJAG_01680","SJAG_03845","SJAG_04613","SJAG_04422","SJAG_02255","SJAG_04312","SJAG_03048","SJAG_04249","SJAG_01707","SJAG_00996","SJAG_00802","SJAG_00441","SJAG_01000","SJAG_03097","SJAG_00969","SJAG_01210","SJAG_03319","SJAG_00987","SJAG_01799","SJAG_04825","SJAG_00266","SJAG_00163","SJAG_04039","SJAG_00685","SJAG_04946","SJAG_03067","SJAG_02162","SJAG_04381","SJAG_01311","SJAG_00124","SJAG_01331","SJAG_03081","SJAG_04512","SJAG_04671","SJAG_01199","SJAG_01187","SJAG_02730","SJAG_04584","SJAG_04855","SJAG_00247","SJAG_03473","SJAG_04268","SJAG_04026","SJAG_03997","SJAG_05314","SJAG_02898","SJAG_04921","SJAG_02981","SJAG_02846","SJAG_00797","SJAG_01728","SJAG_02752"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79085,90532,79148,100415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[71033,89827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[108279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"},{"annotations":[101390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045892"},{"annotations":[102679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[112068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[73408,76377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[115783,111680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[118306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"},{"annotations":[117149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[109203,102683,98097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[90127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[92010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"},{"annotations":[108280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[72459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902369"},{"annotations":[74435,77114,103869,114134,75710,94082,102165,112400,108542,108884,74661,70477,80791,77376,91524,70920,91596,94224,104572,107044,111454,87933,106571,93739,111032,79855,72256,117671,114568,93641,74205,92501,95063,96617,94980,106229,73597,107064,108281,94568,74010,101315,104271,113280,106813,106135,109323,99210,92477,72552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000122"},{"annotations":[74062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"},{"annotations":[101316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010621"},{"annotations":[118237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"},{"annotations":[103541],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[106950,99685,103542,108828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[99686,102593,115328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[99687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[102594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"},{"annotations":[90978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Any cellular process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"negatively_regulates","term_name":"nucleobase-containing compound metabolic process","termid":"GO:0006139"}],"gene_count":79,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00142":null,"SJAG_00163":null,"SJAG_00247":null,"SJAG_00266":null,"SJAG_00290":null,"SJAG_00410":null,"SJAG_00441":null,"SJAG_00573":null,"SJAG_00685":null,"SJAG_00792":null,"SJAG_00797":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00969":null,"SJAG_00987":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01068":null,"SJAG_01157":null,"SJAG_01187":null,"SJAG_01199":null,"SJAG_01210":null,"SJAG_01230":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01331":null,"SJAG_01680":null,"SJAG_01707":null,"SJAG_01728":null,"SJAG_01799":null,"SJAG_01804":null,"SJAG_02104":null,"SJAG_02162":null,"SJAG_02255":null,"SJAG_02370":null,"SJAG_02380":null,"SJAG_02385":null,"SJAG_02444":null,"SJAG_02573":null,"SJAG_02724":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02846":null,"SJAG_02858":null,"SJAG_02898":null,"SJAG_02981":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03097":null,"SJAG_03143":null,"SJAG_03283":null,"SJAG_03319":null,"SJAG_03473":null,"SJAG_03696":null,"SJAG_03845":null,"SJAG_03883":null,"SJAG_03997":null,"SJAG_04026":null,"SJAG_04039":null,"SJAG_04249":null,"SJAG_04268":null,"SJAG_04312":null,"SJAG_04381":null,"SJAG_04422":null,"SJAG_04512":null,"SJAG_04539":null,"SJAG_04584":null,"SJAG_04586":null,"SJAG_04607":null,"SJAG_04613":null,"SJAG_04671":null,"SJAG_04825":null,"SJAG_04855":null,"SJAG_04921":null,"SJAG_04946":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleobase-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process","type":"exact"},{"name":"down-regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process","type":"exact"},{"name":"downregulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process","type":"exact"},{"name":"inhibition of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process","type":"narrow"},{"name":"negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process","type":"related"},{"name":"negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism","type":"exact"}],"termid":"GO:0045934","terms_by_termid":{"GO:0000122":null,"GO:0010621":null,"GO:0011000":null,"GO:0016480":null,"GO:0031582":null,"GO:0034244":null,"GO:0045128":null,"GO:0045820":null,"GO:0045892":null,"GO:0048255":null,"GO:0060195":null,"GO:0060212":null,"GO:0070935":null,"GO:0071807":null,"GO:0090001":null,"GO:0090669":null,"GO:0120271":null,"GO:1902369":null,"GO:1902681":null,"GO:1903464":null,"GO:1903467":null,"GO:1904332":null,"GO:1905707":null,"GO:2001033":null,"GO:2001211":null}}


id: GO:0098770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the FBXO protein family. Members of this family have an F-box protein motif of approximately 50 amino acids that functions as a site of protein-protein interaction.","definition_xrefs":["PMID:11178263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"FBXO family protein binding","termid":"GO:0098770"}


id: GO:0008825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid = S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.","definition_xrefs":["EC:2.1.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyclopropane-fatty-acyl-phospholipid synthase activity","secondary_identifiers":["MetaCyc:2.1.1.79-RXN","RHEA:11988"],"synonyms":[{"name":"CFA synthase activity","type":"related"},{"name":"S-adenosyl-L-methionine:unsaturated-phospholipid methyltransferase (cyclizing)","type":"related"},{"name":"cyclopropane fatty acid synthase activity","type":"related"},{"name":"cyclopropane fatty acid synthetase activity","type":"related"},{"name":"cyclopropane synthase activity","type":"related"},{"name":"cyclopropane synthetase activity","type":"broad"},{"name":"unsaturated-phospholipid methyltransferase activity","type":"broad"}],"termid":"GO:0008825"}


id: PBO:0059533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Glu (GAA/G)","termid":"PBO:0059533"}


id: FYPO:0005851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the biotinylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein biotinylation during vegetative growth","synonyms":[{"name":"abnormal protein biotinylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005851"}


id: PBO:0052585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 3","termid":"PBO:0052585"}


id: PBO:0085402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein involved in remodeling GPI anchors; member of the MBOAT family of putative membrane-bound O-acyltransferases; role in misfolded protein quality control; proposed to be involved in glycerol transport; homolog of the mammalian Hedgehog pathway modulator HHATL; GUP1 has a paralog, GUP2, that arose from the whole genome duplication","termid":"PBO:0085402"}


id: GO:0070136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-1,2-linked oligomannosides, which are found in fungal cell wall phosphopeptidomannan and phospholipomannan.","definition_xrefs":["GOC:mah","PMID:18234669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan biosynthetic process","termid":"GO:0046354"},{"relation_name":"is_a","term_name":"fungal-type cell wall polysaccharide biosynthetic process","termid":"GO:0051278"},{"relation_name":"is_a","term_name":"beta-1,2-oligomannoside metabolic process","termid":"GO:0070135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"beta-1,2-oligomannoside biosynthetic process","synonyms":[{"name":"beta-1,2-oligomannoside anabolism","type":"exact"},{"name":"beta-1,2-oligomannoside biosynthesis","type":"exact"},{"name":"beta-1,2-oligomannoside formation","type":"exact"},{"name":"beta-1,2-oligomannoside synthesis","type":"exact"}],"termid":"GO:0070136"}


id: PR:O74913
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C757.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.02c","synonyms":[{"name":"Spom972h-SPCC757.02c","type":"exact"}],"termid":"PR:O74913"}


id: MONDO:0016439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Elastoderma is a rare condition that affects the skin. People affected by elastoderma generally have increased laxity of skin covering a specific area of the body. Decreased recoil of the skin has also been reported. Although any part of the body can be affected, the skin of the neck and extremities (arms and legs, especially at the elbows and/or knees) are most commonly involved. The exact underlying cause is currently unknown; however, it generally occurs sporadically in people with no family history of the condition. There is no standard therapy available for elastoderma. Some cases have been treated with surgical excision (removal of affected skin), but hyperlaxity of skin often returns following the surgery.","direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"elastoderma","secondary_identifiers":["MEDGEN:590504","SCTID:238832003","GARD:12716","icd11.foundation:1880397739","ICD9:701.8","Orphanet:228240","UMLS:C0406555"],"termid":"MONDO:0016439","xrefs":{"Monarch":{"xref_id":"0016439"}}}


id: PBO:0069855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1141, pseudogene","termid":"PBO:0069855"}


id: GO:1905894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cellular response to tunicamycin.","definition_xrefs":["GOC:bc","PMID:21803450","GOC:TermGenie","GOC:aruk","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular response to tunicamycin (obsolete GO:1905894)","termid":"GO:1905894"}


id: PBO:0039165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 8","termid":"PBO:0039165"}


id: PBO:0110335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6V1F pseudogene 1","termid":"PBO:0110335"}


id: FYPO:0001505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular phosphatidylserine level","synonyms":[{"name":"increased cellular PS level","type":"exact"},{"name":"increased cellular phosphatidyl-L-serine level","type":"exact"},{"name":"increased cellular phosphatidylserine level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylserine level during vegetative growth","type":"exact"},{"name":"increased phosphatidylserine accumulation","type":"related"}],"termid":"FYPO:0001505"}


id: PBO:0002202
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOnopolar Attatchment","termid":"PBO:0002202"}


id: PBO:0044161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDSPL2 pseudogene 1","termid":"PBO:0044161"}


id: PBO:0002719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit, Anp family Mnn9 (predicted)","termid":"PBO:0002719"}


id: FYPO:0006815
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PMID:30652128","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"increased histone H3-K14 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"increased histone H3-K14 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K14 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3K14 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006815"}


id: GO:0033668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of host apoptosis, leading to a decrease in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host programmed cell death","termid":"GO:0052041"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host apoptosis","termid":"GO:0052150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host apoptosis","secondary_identifiers":["GO:0039650","Reactome:R-HSA-9635465"],"synonyms":[{"name":"down regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"down-regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"downregulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"inhibition by organism of host apoptotic programmed cell death","type":"exact"},{"name":"negative regulation by symbiont of host apoptosis","type":"exact"},{"name":"negative regulation by symbiont of host apoptotic process","type":"exact"},{"name":"negative regulation by virus of host apoptosis","type":"narrow"},{"name":"suppression by symbiont of host apoptotic process","type":"exact"},{"name":"suppression by virus of host apoptosis","type":"narrow"}],"termid":"GO:0033668"}


id: SO:0001619
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant of a non coding RNA gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_coding_transcript_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:ncRNA","type":"narrow"},{"name":"Jannovar:non_coding_transcript_variant","type":"exact"},{"name":"VEP:non_coding_transcript_variant","type":"exact"},{"name":"nc transcript variant","type":"exact"},{"name":"non coding transcript variant","type":"exact"},{"name":"within_non_coding_gene","type":"exact"}],"termid":"SO:0001619"}


id: GO:0004903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a growth hormone and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"growth hormone receptor activity","termid":"GO:0004903"}


id: PBO:0049748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HBS1 like translational GTPase","termid":"PBO:0049748"}


id: PBO:0077317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 52B","termid":"PBO:0077317"}


id: CHEBI:71240
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium diphosphate","termid":"CHEBI:71240"}


id: PBO:0081886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 836","termid":"PBO:0081886"}


id: PBO:0029169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_plasma_membrane","termid":"PBO:0029169"}


id: GO:0006176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate) from other compounds, including ADP, adenosine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dATP biosynthetic process","termid":"GO:0006175"},{"relation_name":"is_a","term_name":"ADP metabolic process","termid":"GO:0046031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dATP biosynthetic process from ADP","synonyms":[{"name":"dATP anabolism from ADP","type":"exact"},{"name":"dATP formation from ADP","type":"exact"},{"name":"dATP synthesis from ADP","type":"exact"}],"termid":"GO:0006176"}


id: PR:O74437
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1682.06 gene.","definition_xrefs":["UniProtKB:O74437","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C1682.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.06","synonyms":[{"name":"Spom972h-SPCC1682.06","type":"exact"}],"termid":"PR:O74437"}


id: MONDO:0002335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chronic inflammatory demyelinating polyneuritis (obsolete MONDO:0002335)","secondary_identifiers":["NANDO:2100251","NANDO:1200030","NANDO:2200905"],"termid":"MONDO:0002335","xrefs":{"Monarch":{"xref_id":"0002335"}}}


id: PBO:0090300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit Cwf7","termid":"PBO:0090300"}


id: MONDO:0008490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, multiple congenital anomalies/dysmorphic syndrome characterized by craniofacial dysmorphism (midface hypoplasia, depressed nasal bridge, small nose with upturned tip, cleft palate, Pierre Robin sequence), bilateral, pronounced sensorineural hearing loss, and skeletal/joint anomalies (including spondyloepiphyseal dysplasia, arthralgia/arthropathy), in the absence of ocular abnormalities.","definition_xrefs":["Orphanet:166100"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Stickler syndrome","termid":"MONDO:0019354"},{"relation_name":"is_a","term_name":"otospondylomegaepiphyseal dysplasia","termid":"MONDO:0008975"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"otospondylomegaepiphyseal dysplasia, autosomal dominant","secondary_identifiers":["Orphanet:3450","DOID:0080677","OMIM:277610","GARD:5021","MESH:C537494","UMLS:C1848488","MEDGEN:341234","DOID:4258","NORD:1533","OMIM:184840","SCTID:699313003","MESH:C535776","SCTID:4602007"],"synonyms":[{"name":"COL11A2 Stickler syndrome","type":"exact"},{"name":"OSMED, Heterozygous","type":"exact"},{"name":"OSMED, heterozygous","type":"exact"},{"name":"OSMEDA","type":"exact"},{"name":"Piere-Robin syndrome","type":"exact"},{"name":"Pierre Robin malformation","type":"exact"},{"name":"Pierre Robin sequence-fetal chondrodysplasia syndrome","type":"exact"},{"name":"Pierre Robin syndrome with fetal chondrodysplasia","type":"exact"},{"name":"Pierre Robin syndrome with fetal chondrodysplasia Stickler syndrome, Nonocular type","type":"exact"},{"name":"Pierre Robin syndrome with fetal chondrodysplasia Stickler syndrome, Nonocular type, formerly","type":"exact"},{"name":"Pierre Robin syndrome with foetal chondrodysplasia","type":"exact"},{"name":"Pierre Robin syndrome with foetal chondrodysplasia Stickler syndrome, Nonocular type","type":"exact"},{"name":"Pierre Robin syndrome with foetal chondrodysplasia Stickler syndrome, Nonocular type, formerly","type":"exact"},{"name":"Pierre Robin syndrome-fetal chondrodysplasia syndrome","type":"exact"},{"name":"STICKLER syndrome, type III","type":"exact"},{"name":"STL3","type":"exact"},{"name":"Stickler syndrome caused by mutation in COL11A2","type":"exact"},{"name":"Stickler syndrome nonocular type","type":"related"},{"name":"Stickler syndrome, Nonocular type","type":"related"},{"name":"Stickler syndrome, non-ocular type","type":"exact"},{"name":"Stickler syndrome, type 3","type":"exact"},{"name":"Stickler syndrome, type III, formerly","type":"exact"},{"name":"WZS","type":"exact"},{"name":"Weissenbacher- Zweymuller syndrome","type":"related"},{"name":"Weissenbacher-Zweymuller syndrome","type":"exact"},{"name":"Weissenbacher-Zweymüller syndrome","type":"related"},{"name":"heterozygous OSMED","type":"exact"},{"name":"heterozygous otospondylomegaepiphyseal dysplasia","type":"exact"},{"name":"otospondylomegaepiphyseal dysplasia, autosomal dominant","type":"exact"}],"termid":"MONDO:0008490","xrefs":{"Monarch":{"xref_id":"0008490"}}}


id: PBO:0061894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 1, medium wave sensitive 2","termid":"PBO:0061894"}


id: MONDO:0975758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign vascular tumor","termid":"MONDO:0971115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microvenular haemangioma","secondary_identifiers":["UMLS:C1304506","MEDGEN:725856","Orphanet:675369"],"termid":"MONDO:0975758","xrefs":{"Monarch":{"xref_id":"0975758"}}}


id: PBO:0046128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4 gamma 2","termid":"PBO:0046128"}


id: GO:0018235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine to form peptidyl-N6-carboxy-L-lysine.","definition_xrefs":["RESID:AA0114"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine carboxylation (obsolete GO:0018235)","termid":"GO:0018235"}


id: PBO:0053835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1100","termid":"PBO:0053835"}


id: MONDO:0020482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myotonia permanens is a very rare, persistent and more severe form of potassium-aggravated myotonia (PAM).","definition_xrefs":["Orphanet:99735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium-aggravated myotonia","termid":"MONDO:0018959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotonia permanens","secondary_identifiers":["SCTID:715789009","icd11.foundation:2133644550","MEDGEN:1845910","UMLS:C5848361","GARD:16905"],"termid":"MONDO:0020482","xrefs":{"Monarch":{"xref_id":"0020482"}}}


id: FYPO:0000797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tert-butyl hydroperoxide (TBHP or t-BOOH). Cells stop growing (and may die) at a concentration of tert-butyl hydroperoxide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to tert-butyl hydroperoxide","synonyms":[{"name":"hypersensitive to tert-butyl hydroperoxide","type":"exact"},{"name":"sensitive to 2-methyl-prop-2-yl-hydroperoxide","type":"exact"},{"name":"sensitive to TBHP","type":"exact"},{"name":"sensitive to t-BOOH","type":"exact"},{"name":"sensitive to tert-butyl hydroperoxide during mitotic cell cycle","type":"related"},{"name":"sensitive to tert-butyl hydroperoxide during vegetative growth","type":"exact"}],"termid":"FYPO:0000797"}


id: PBO:0061109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 2","termid":"PBO:0061109"}


id: GO:0090290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte proliferation","termid":"GO:0070665"},{"relation_name":"is_a","term_name":"regulation of osteoclast proliferation","termid":"GO:0090289"},{"relation_name":"positively_regulates","term_name":"osteoclast proliferation","termid":"GO:0002158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of osteoclast proliferation","termid":"GO:0090290"}


id: PR:P87177
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02804","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C3D6.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.12","secondary_identifiers":["UniProtKB:P87177"],"synonyms":[{"name":"Spom972h-WDR3","type":"exact"}],"termid":"PR:P87177"}


id: PBO:0002173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad54 homolog Rhp54","termid":"PBO:0002173"}


id: SO:0001889
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature amplification of a region containing a transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_amplification","termid":"SO:0001880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_amplification","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"VEP:transcript_amplification","type":"exact"},{"name":"transcript amplification","type":"exact"}],"termid":"SO:0001889"}


id: PBO:0034057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_closure_of","termid":"PBO:0034057"}


id: MONDO:1010779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alopecia areata that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia areata, non-human animal","termid":"MONDO:1010140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia areata, domestic cat","secondary_identifiers":["OMIA:001702-9685"],"termid":"MONDO:1010779","xrefs":{"Monarch":{"xref_id":"1010779"}}}


id: PBO:0004852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg6 (predicted)","termid":"PBO:0004852"}


id: GO:0075277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of telium development, a process that leads to the formation of a teliospore-bearing sorus of the rust fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of telium development","termid":"GO:0075276"},{"relation_name":"positively_regulates","term_name":"telium development","termid":"GO:0075275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of telium development","termid":"GO:0075277"}


id: PBO:0051356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-8 (pseudogene)","termid":"PBO:0051356"}


id: PBO:0043710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 7","termid":"PBO:0043710"}


id: MONDO:0014838
data:
  {"annotated_genes":["SJAG_03576"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85973],"is_not":false,"summary":null,"term":"MONDO:0014838"}]},"cv_name":"mondo","definition":"Any Coffin-Siris syndrome in which the cause of the disease is a mutation in the SMARCE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03576":null},"genotype_count":0,"is_obsolete":false,"name":"Coffin-Siris syndrome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112368","UMLS:C4310788","GARD:16170","MEDGEN:934755","OMIM:616938"],"synonyms":[{"name":"COFFIN-SIRIS syndrome 5","type":"related"},{"name":"CSS5","type":"related"},{"name":"Coffin-Siris syndrome 5","type":"exact"},{"name":"Coffin-Siris syndrome caused by mutation in SMARCE1","type":"exact"},{"name":"Coffin-Siris syndrome type 5","type":"exact"},{"name":"SMARCE1 Coffin-Siris syndrome","type":"exact"}],"termid":"MONDO:0014838","terms_by_termid":{"MONDO:0014838":null},"xrefs":{"Monarch":{"xref_id":"0014838"}}}


id: GO:1990189
data:
  {"annotated_genes":["SJAG_03537","SJAG_04631"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74439,77709],"is_not":false,"summary":null,"term":"GO:1990189"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + N-terminal L-seryl-[protein] = CoA + H+ + N-terminal Nalpha-acetyl-L-seryl-[protein].","definition_xrefs":["PMID:23912279","RHEA:50504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N-terminal amino-acid acetyltransferase activity","termid":"GO:0004596"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03537":null,"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740","GO:0034212"],"is_obsolete":false,"name":"protein N-terminal-serine acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"peptide-serine-alpha-N-acetyltransferase activity","type":"exact"}],"termid":"GO:1990189","terms_by_termid":{"GO:1990189":null}}


id: PBO:0062714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily K member 1 pseudogene","termid":"PBO:0062714"}


id: PBO:0034058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pollinates","termid":"PBO:0034058"}


id: PBO:0049318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase zeta 1","termid":"PBO:0049318"}


id: PBO:0086025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; transcriptionally regulated by Upc2p via an upstream sterol response element; strong increase in transcript abundance during anaerobic growth compared to aerobic growth; cells deleted for YML083C do not exhibit growth defects in anerobic or anaerobic conditions","termid":"PBO:0086025"}


id: PBO:0069043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 288, pseudogene","termid":"PBO:0069043"}


id: PBO:0039184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKAP13 antisense RNA 1","termid":"PBO:0039184"}


id: GO:0000326
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A storage vacuole that contains a lytic vacuole; identified in plants.","definition_xrefs":["PMID:11739409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"storage vacuole","termid":"GO:0000322"},{"relation_name":"is_a","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"protein storage vacuole","termid":"GO:0000326"}


id: MONDO:0013647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary microcephaly-epilepsy-permanent neonatal diabetes syndrome (obsolete MONDO:0013647)","termid":"MONDO:0013647","xrefs":{"Monarch":{"xref_id":"0013647"}}}


id: PBO:0059090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC2 antisense RNA 1","termid":"PBO:0059090"}


id: MONDO:0014134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary pulmonary hypertension in which the cause of the disease is a mutation in the SMAD9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heritable pulmonary arterial hypertension","termid":"MONDO:0017148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary hypertension, primary, 2","secondary_identifiers":["MEDGEN:854709","GARD:18394","OMIM:615342","UMLS:C3888002"],"synonyms":[{"name":"PPH2","type":"related"},{"name":"SMAD9 primary pulmonary hypertension","type":"exact"},{"name":"primary pulmonary hypertension caused by mutation in SMAD9","type":"exact"},{"name":"pulmonary hypertension, primary, 2","type":"exact"},{"name":"pulmonary hypertension, primary, type 2","type":"exact"}],"termid":"MONDO:0014134","xrefs":{"Monarch":{"xref_id":"0014134"}}}


id: PR:O42898
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A catechol O-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catechol O-methyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.03","secondary_identifiers":["UniProtKB:O42898"],"synonyms":[{"name":"Spom972h-COMT","type":"exact"}],"termid":"PR:O42898"}


id: PBO:0005223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit/TATA-binding protein associated factor/transcription factor TFIID complex subunit Taf5","termid":"PBO:0005223"}


id: PBO:0066958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 260","termid":"PBO:0066958"}


id: PBO:0017757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIP family cytoskeletal protein Bbc1 (predicted)","termid":"PBO:0017757"}


id: MONDO:0020648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postinfectious encephalitis","termid":"MONDO:0020068"},{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rubella encephalitis","secondary_identifiers":["MEDGEN:536765","UMLS:C0238099","SCTID:192689006"],"termid":"MONDO:0020648","xrefs":{"Monarch":{"xref_id":"0020648"}}}


id: PBO:0085549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; required for ribosome assembly and 20S pre-rRNA processing; mutations confer cryptopleurine resistance; homologous to mammalian ribosomal protein S14 and bacterial S11; RPS14B has a paralog, RPS14A, that arose from the whole genome duplication","termid":"PBO:0085549"}


id: PBO:0078457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 9","termid":"PBO:0078457"}


id: PBO:0065454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit ubiquitin receptor, non-ATPase 2","termid":"PBO:0065454"}


id: PBO:0041897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAVIN2 and TMEFF2 antisense RNA 1","termid":"PBO:0041897"}


id: PR:Q9P7W3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1703.07 gene.","definition_xrefs":["UniProtKB:Q9P7W3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-citrate synthase subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.07","synonyms":[{"name":"ATP-citrate (pro-S-)-lyase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC1703.07","type":"exact"},{"name":"citrate cleavage enzyme subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7W3"}


id: PBO:0057928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3654","termid":"PBO:0057928"}


id: GO:0051645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the Golgi is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"Golgi localization","synonyms":[{"name":"Golgi apparatus localization","type":"exact"},{"name":"Golgi body localization","type":"exact"},{"name":"Golgi localisation","type":"exact"},{"name":"establishment and maintenance of Golgi localization","type":"exact"}],"termid":"GO:0051645"}


id: GO:0061417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:dph","PMID:9767597"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress (obsolete GO:0061417)","termid":"GO:0061417"}


id: PBO:0001038
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains RLM1 element","termid":"PBO:0001038"}


id: PBO:0053025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine aminopeptidase 3 pseudogene 1","termid":"PBO:0053025"}


id: PBO:0002738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid family protease","termid":"PBO:0002738"}


id: MONDO:0003757
data:
  {"annotated_genes":["SJAG_04506","SJAG_04628","SJAG_02322","SJAG_01530","SJAG_01857","SJAG_00773","SJAG_02306","SJAG_04110","SJAG_04566","SJAG_01159","SJAG_04123","SJAG_02615","SJAG_03895","SJAG_03320","SJAG_03457","SJAG_04292","SJAG_01854","SJAG_01848","SJAG_00308","SJAG_04537","SJAG_00660","SJAG_04325","SJAG_03866","SJAG_05289","SJAG_00564","SJAG_04757","SJAG_00199","SJAG_04145","SJAG_01537","SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85372,85371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014702"},{"annotations":[87342,87341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014975"},{"annotations":[87608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030669"},{"annotations":[85790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014567"},{"annotations":[86005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009748"},{"annotations":[86058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011489"},{"annotations":[87410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011532"},{"annotations":[85531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010043"},{"annotations":[85536,85535,85534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012256"},{"annotations":[85421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012476"},{"annotations":[85541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012453"},{"annotations":[87393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012866"},{"annotations":[86663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012787"},{"annotations":[86851,86852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008438"},{"annotations":[87111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012928"},{"annotations":[85637,85639,85638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014018"},{"annotations":[85636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014020"},{"annotations":[85997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014305"},{"annotations":[85981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014282"},{"annotations":[85468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014644"},{"annotations":[86471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014882"},{"annotations":[86843,86842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011006"},{"annotations":[85452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014679"},{"annotations":[87096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012651"},{"annotations":[86882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957221"},{"annotations":[86392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957958"},{"annotations":[87050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032906"},{"annotations":[86394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030482"},{"annotations":[86438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030512"},{"annotations":[87190,87189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031019"},{"annotations":[86687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957308"},{"annotations":[86688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957309"}]},"cv_name":"mondo","definition":"Complete paralysis of the lower half of the body including both legs, often caused by damage to the spinal cord.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system 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lower","type":"exact"},{"name":"severe or complete loss of motor function in the lower extremities and lower portions of the trunk","type":"related"}],"termid":"MONDO:0003757","terms_by_termid":{"MONDO:0008438":null,"MONDO:0009748":null,"MONDO:0010043":null,"MONDO:0011006":null,"MONDO:0011489":null,"MONDO:0011532":null,"MONDO:0012256":null,"MONDO:0012453":null,"MONDO:0012476":null,"MONDO:0012651":null,"MONDO:0012787":null,"MONDO:0012866":null,"MONDO:0012928":null,"MONDO:0014018":null,"MONDO:0014020":null,"MONDO:0014282":null,"MONDO:0014305":null,"MONDO:0014567":null,"MONDO:0014644":null,"MONDO:0014679":null,"MONDO:0014702":null,"MONDO:0014882":null,"MONDO:0014975":null,"MONDO:0030482":null,"MONDO:0030512":null,"MONDO:0030669":null,"MONDO:0031019":null,"MONDO:0032906":null,"MONDO:0957221":null,"MONDO:0957308":null,"MONDO:0957309":null,"MONDO:0957958":null},"xrefs":{"Monarch":{"xref_id":"0003757"}}}


id: PBO:0074916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 87","termid":"PBO:0074916"}


id: PBO:0039676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 5 subunit mu 1","termid":"PBO:0039676"}


id: PBO:0059808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 34","termid":"PBO:0059808"}


id: GO:0046808
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Antigenically dense structures located at the periphery of nuclei, close to but not abutting nuclear membranes. Assemblons contain the proteins for immature-capsid assembly; they are located at the periphery of a diffuse structure composed of proteins involved in DNA synthesis, which overlaps only minimally with the assemblons. More than one site can be present simultaneously.","definition_xrefs":["PMID:8676489"],"gene_count":0,"genotype_count":0,"name":"obsolete assemblon (obsolete GO:0046808)","termid":"GO:0046808"}


id: MONDO:0019039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hemorrhagic disorder due to a constitutional coagulation factors defect (obsolete MONDO:0019039)","secondary_identifiers":["Orphanet:68334"],"synonyms":[{"name":"rare bleeding disorder due to a constitutional coagulation factors defect","type":"exact"},{"name":"rare coagulopathy due to a constitutional coagulation factors defect","type":"exact"}],"termid":"MONDO:0019039","xrefs":{"Monarch":{"xref_id":"0019039"}}}


id: GO:0097356
data:
  {"annotated_genes":["SJAG_03789"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[118857],"is_not":false,"summary":null,"term":"GO:0097356"}]},"cv_name":"cellular_component","definition":"The perinucleolar compartment (PNC) is a subnuclear structure associated with, but structurally distinct from, the nucleolus. The PNC contains large amounts of the heterogeneous nuclear ribonucleoprotein complex (hnRNP) called hnRNP 1 (PTB). Many RNA binding proteins as well as RNA polymerase III transcripts are highly enriched in this compartment. PTB and pol III transcripts are required for the integrity of the PNC.","definition_xrefs":["Wikipedia:Perinucleolar_compartment","GOC:vw","PMID:21385875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear lumen","termid":"GO:0031981"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"perinucleolar compartment","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perinucleolar region","type":"exact"}],"termid":"GO:0097356","terms_by_termid":{"GO:0097356":null}}


id: PBO:0058701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6829","termid":"PBO:0058701"}


id: GO:0018779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-chloro-4,6-dihydroxy-1,3,5-triazine hydrolase activity (obsolete GO:0018779)","synonyms":[{"name":"2-chloro-4,6-dihydroxy-1,3,5-triazine hydrolase activity","type":"exact"}],"termid":"GO:0018779"}


id: GO:0018829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,1-dichloro-2,2-bis(4-chlorophenyl)ethane = HCl + 1-chloro-2,2-bis(4-chlorophenyl)ethene. 1,1-dichloro-2,2-bis(4-chlorophenyl)ethane is also known as DDD; 1-chloro-2,2-bis(4-chlorophenyl)ethene is also known as DDMU.","definition_xrefs":["UM-BBD_reactionID:r0513"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,1-dichloro-2,2-bis(4-chlorophenyl)ethane dehydrochlorinase activity (obsolete GO:0018829)","synonyms":[{"name":"DDD dehydrochlorinase activity","type":"exact"}],"termid":"GO:0018829"}


id: GO:0051759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of sister chromosomes from the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes, during meiosis II.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"part_of","term_name":"meiotic sister chromatid segregation","termid":"GO:0045144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"sister chromosome movement towards spindle pole involved in meiotic sister chromatid segregation","synonyms":[{"name":"meiosis II, sister chromosome movement towards spindle pole","type":"exact"},{"name":"sister chromosome movement towards spindle pole during meiosis II","type":"related"}],"termid":"GO:0051759"}


id: PBO:0057983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3910-1","termid":"PBO:0057983"}


id: PBO:0063142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate and testis expressed 2","termid":"PBO:0063142"}


id: PBO:0033802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_double-strand_break_repair_via_homologous_recombination","termid":"PBO:0033802"}


id: PBO:0073970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC22A18 antisense RNA","termid":"PBO:0073970"}


id: MONDO:0851100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant cranial nerve neoplasm","termid":"MONDO:0002433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant olfactory nerve neoplasm","secondary_identifiers":["DOID:370","MEDGEN:105419","NCIT:C4768","UMLS:C0496838"],"termid":"MONDO:0851100","xrefs":{"Monarch":{"xref_id":"0851100"}}}


id: PBO:0027247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_polyadenylated_25S_rRNA_level","termid":"PBO:0027247"}


id: PR:Q9UTM8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC139.05 gene.","definition_xrefs":["UniProtKB:Q9UTM8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase C139.05 [NADP(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.05","synonyms":[{"name":"SSDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC139.05","type":"exact"}],"termid":"PR:Q9UTM8"}


id: PBO:0000689
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEven Binding","termid":"PBO:0000689"}


id: GO:0006005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-fucose (6-deoxy-L-galactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose biosynthetic process","termid":"GO:0042353"},{"relation_name":"is_a","term_name":"L-fucose metabolic process","termid":"GO:0042354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"L-fucose biosynthetic process","synonyms":[{"name":"L-fucose anabolism","type":"exact"},{"name":"L-fucose biosynthesis","type":"exact"},{"name":"L-fucose formation","type":"exact"},{"name":"L-fucose synthesis","type":"exact"}],"termid":"GO:0006005"}


id: PBO:0003247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3-phosphate dehydrogenase Gpd3","termid":"PBO:0003247"}


id: GO:0018547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of one or more nitrite (NO2-) groups from nitroglycerin or a derivative.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nitroglycerin reductase activity (obsolete GO:0018547)","secondary_identifiers":["Reactome:R-HSA-9620103"],"synonyms":[{"name":"NG reductase activity","type":"exact"}],"termid":"GO:0018547"}


id: MONDO:0019681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sialidosis type 2","termid":"MONDO:0009738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"juvenile sialidosis type 2","secondary_identifiers":["GARD:19183","Orphanet:93399","SCTID:111383007","UMLS:C5681598","icd11.foundation:1730484030","MEDGEN:1825999"],"synonyms":[{"name":"dysmorphic sialidosis, juvenile form","type":"exact"}],"termid":"MONDO:0019681","xrefs":{"Monarch":{"xref_id":"0019681"}}}


id: PBO:0047871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(2)(q22.3)","termid":"PBO:0047871"}


id: MONDO:0800382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 11","secondary_identifiers":["MEDGEN:480833","UMLS:C3279203"],"synonyms":[{"name":"JBTS11","type":"exact"}],"termid":"MONDO:0800382","xrefs":{"Monarch":{"xref_id":"0800382"}}}


id: SO:0000713
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif that is active in the DNA form of the sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_motif","termid":"SO:0000714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_motif","secondary_identifiers":["http://en.wikipedia.org/wiki/DNA_motif"],"synonyms":[{"name":"DNA motif","type":"exact"}],"termid":"SO:0000713"}


id: MONDO:0010702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurodevelopmental disorder in the ciliopathy group that is lethal in males and characterized by variable anomalies including external malformations (craniofacial and digital), and possible involvement of the central nervous system (CNS) and of viscera (kidneys, pancreas and ovaries) in females.","definition_xrefs":["Orphanet:2750"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"},{"relation_name":"excluded_subClassOf","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"hereditary sebaceous gland anomaly","termid":"MONDO:0021029"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"orofaciodigital syndrome I","secondary_identifiers":["DOID:0060316","MEDGEN:307142","MESH:C537134","SCTID:1779005","SCTID:763833006","GARD:4121","UMLS:C1510460","OMIM:311200","NCIT:C75481"],"synonyms":[{"name":"OFD syndrome 1","type":"exact"},{"name":"OFD1","type":"exact"},{"name":"OFDI","type":"exact"},{"name":"OFDS 1","type":"exact"},{"name":"OFDSI","type":"exact"},{"name":"Papillon-Leage and Psaume syndrome","type":"exact"},{"name":"Papillon-Leage-Psaume syndrome","type":"exact"},{"name":"Papillon-Léage-Psaume syndrome","type":"exact"},{"name":"Papillon-league-Psaume syndrome (formerly)","type":"exact"},{"name":"oral facial digital syndrome 1","type":"exact"},{"name":"oral facial digital syndrome type 1","type":"exact"},{"name":"oral-facial-digital syndrome 1","type":"exact"},{"name":"oral-facial-digital syndrome type 1","type":"exact"},{"name":"oral-facial-digital syndrome, type 1","type":"exact"},{"name":"orofaciodigital syndrome 1","type":"exact"},{"name":"orofaciodigital syndrome I","type":"exact"},{"name":"orofaciodigital syndrome i, X-linked dominant","type":"exact"},{"name":"orofaciodigital syndrome type 1","type":"exact"},{"name":"orofaciodigital syndrome type I","type":"exact"}],"termid":"MONDO:0010702","xrefs":{"Monarch":{"xref_id":"0010702"}}}


id: PBO:0066748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 46","termid":"PBO:0066748"}


id: GO:0009049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a signal peptide from a protein precursor by an aspartic endopeptidase mechanism.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartic-type signal peptidase activity (obsolete GO:0009049)","synonyms":[{"name":"aspartic-type signal peptidase activity","type":"exact"}],"termid":"GO:0009049"}


id: GO:0034910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-hydroxy-3-succinoylpyridine + H2O = succinic semialdehyde + 2,5-dihydroxypyridine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-hydroxy-3-succinoylpyridine hydrolase activity (obsolete GO:0034910)","termid":"GO:0034910"}


id: _global:interaction_genotype_b
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_genotype_b","termid":"_global:interaction_genotype_b"}


id: PBO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rik1-associated factor","termid":"PBO:0005004"}


id: SO:0000856
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is similar or identical across more than one species.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved","termid":"SO:0000856"}


id: GO:0042037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of peptidyl-L-histidine to form peptidyl-L-3'-methyl-L-histidine (otherwise known as pi-methylhistidine, pros-methylhistidine).","definition_xrefs":["RESID:AA0073"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-histidine methylation, to form pros-methylhistidine (obsolete GO:0042037)","synonyms":[{"name":"peptidyl-histidine pros-methylation","type":"exact"}],"termid":"GO:0042037"}


id: PBO:0060255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCN opposite strand","termid":"PBO:0060255"}


id: PBO:0057231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 410","termid":"PBO:0057231"}


id: PBO:0073837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 13","termid":"PBO:0073837"}


id: PBO:0057828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3147","termid":"PBO:0057828"}


id: PBO:0027671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_response_to_mitotic_cell_cycle_spindle_assembly_checkpoint_signaling","termid":"PBO:0027671"}


id: GO:1904528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microtubule binding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:als","PMID:24520051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein binding","termid":"GO:0032092"},{"relation_name":"is_a","term_name":"regulation of microtubule binding","termid":"GO:1904526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microtubule binding","synonyms":[{"name":"activation of microtubule binding","type":"narrow"},{"name":"activation of microtubule severing activity","type":"related"},{"name":"activation of microtubule/chromatin interaction","type":"related"},{"name":"positive regulation of microtubule severing activity","type":"related"},{"name":"positive regulation of microtubule/chromatin interaction","type":"related"},{"name":"up regulation of microtubule binding","type":"exact"},{"name":"up regulation of microtubule severing activity","type":"related"},{"name":"up regulation of microtubule/chromatin interaction","type":"related"},{"name":"up-regulation of microtubule binding","type":"exact"},{"name":"up-regulation of microtubule severing activity","type":"related"},{"name":"up-regulation of microtubule/chromatin interaction","type":"related"},{"name":"upregulation of microtubule binding","type":"exact"},{"name":"upregulation of microtubule severing activity","type":"related"},{"name":"upregulation of microtubule/chromatin interaction","type":"related"}],"termid":"GO:1904528"}


id: MONDO:0000271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urogenital tuberculosis involving a pathogenic inflammatory response in the fallopian tube.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salpingitis","termid":"MONDO:0003619"},{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous salpingitis","secondary_identifiers":["DOID:0050166","ICD9:016.6","MEDGEN:546960","ICD9:016.60","SCTID:49558004","UMLS:C0275933","icd11.foundation:25239933"],"synonyms":[{"name":"fallopian tube tuberculosis","type":"related"}],"termid":"MONDO:0000271","xrefs":{"Monarch":{"xref_id":"0000271"}}}


id: PBO:0078516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM7 antisense RNA 2","termid":"PBO:0078516"}


id: GO:1904565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-oleoyl-sn-glycerol 3-phosphate stimulus.","definition_xrefs":["GO_REF:0000071","PMID:12139919","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 1-oleoyl-sn-glycerol 3-phosphate","synonyms":[{"name":"response to 1-oleoyl lysophosphatidic acid","type":"exact"},{"name":"response to LPA","type":"exact"},{"name":"response to lysophosphatidic acid","type":"exact"},{"name":"response to oleoyl lysophosphatidic acid","type":"exact"},{"name":"response to oleoyl-L-alpha-lysophosphatidic acid","type":"exact"}],"termid":"GO:1904565"}


id: MONDO:0018180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"staphylococcal toxemia","termid":"MONDO:0017592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal scarlet fever","secondary_identifiers":["ICD10CM:A38","UMLS:C5848379","Orphanet:36235","MEDGEN:1853264","GARD:18819","icd11.foundation:449652676"],"termid":"MONDO:0018180","xrefs":{"Monarch":{"xref_id":"0018180"}}}


id: PBO:0059684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 50","termid":"PBO:0059684"}


id: PBO:0048954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 5","termid":"PBO:0048954"}


id: GO:1904378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintaining an endoplasmic reticulum (ER) protein in an unfolded, soluble state that contributes to its degradation by the cytoplasmic proteasome. Maintaining ER-resident proteins in an unfolded yet soluble state condition after their retro-translocation favors their turnover by the cytosolic proteasome.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:21636303","GO_REF:0000060","GOC:nc","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of unfolded protein","termid":"GO:0036506"},{"relation_name":"part_of","term_name":"ERAD pathway","termid":"GO:0036503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"maintenance of unfolded protein involved in ERAD pathway","synonyms":[{"name":"ERAD chaperone-like activity","type":"related"},{"name":"chaperone holdase activity","type":"related"},{"name":"holdase activity","type":"related"},{"name":"maintenance of unfolded protein during ERAD","type":"related"},{"name":"maintenance of unfolded protein involved in ER-associated degradation pathway","type":"related"},{"name":"maintenance of unfolded protein involved in endoplasmic reticulum-associated degradation","type":"exact"},{"name":"maintenance of unfolded protein involved in endoplasmic reticulum-associated protein degradation pathway","type":"related"}],"termid":"GO:1904378"}


id: PBO:0029969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_regulation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029969"}


id: GO:0062177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the radial spoke, a protein complex that links the outer microtubule doublet of the ciliary or flagellum axoneme with the sheath that surrounds the central pair of microtubules.","definition_xrefs":["PMID:21613541","PMID:21692193","PMID:8408197","PMID:24124175","PMID:27940518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"axoneme assembly","termid":"GO:0035082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0065003","GO:0008150","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"radial spoke assembly","termid":"GO:0062177"}


id: PBO:0031838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mating_projection_absent","termid":"PBO:0031838"}


id: FYPO:0005098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A) polymerase activity (EC name polynucleotide adenylyltransferase activity) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal poly(A) polymerase activity","synonyms":[{"name":"abnormal PAP activity","type":"exact"},{"name":"abnormal polynucleotide adenylyltransferase activity","type":"exact"}],"termid":"FYPO:0005098"}


id: SO:0000092
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from chloroplast sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chloroplast_sequence","termid":"SO:0000745"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ct_gene","synonyms":[{"name":"chloroplast gene","type":"exact"},{"name":"ct gene","type":"exact"}],"termid":"SO:0000092"}


id: PBO:0078281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 14-1","termid":"PBO:0078281"}


id: GO:1905330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of morphogenesis of an epithelium.","definition_xrefs":["PMID:25745997","GO_REF:0000058","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of morphogenesis of an epithelium","synonyms":[{"name":"regulation of epithelium morphogenesis","type":"exact"}],"termid":"GO:1905330"}


id: PBO:0035736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_mitosis","termid":"PBO:0035736"}


id: PBO:0081556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF474 antisense RNA 1","termid":"PBO:0081556"}


id: PBO:0058474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5582","termid":"PBO:0058474"}


id: GO:0055129
data:
  {"annotated_genes":["SJAG_00660","SJAG_03457","SJAG_00495","SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64673,67525,78261,91224],"is_not":false,"summary":null,"term":"GO:0055129"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-proline, an L-enantiomer of a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline biosynthetic process","termid":"GO:0006561"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00495":null,"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-proline biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrrolidine-2-carboxylic acid biosynthetic process","type":"broad"}],"termid":"GO:0055129","terms_by_termid":{"GO:0055129":null}}


id: MONDO:0008444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paraplegia, optic atrophy, and dementia","secondary_identifiers":["OMIM:182830","UMLS:C1866849","MESH:C566679","MEDGEN:356630"],"synonyms":[{"name":"spastic paraplegia, optic atrophy, and dementia","type":"exact"}],"termid":"MONDO:0008444","xrefs":{"Monarch":{"xref_id":"0008444"}}}


id: MONDO:0014077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cobblestone lissencephaly without muscular or ocular involvement is a form of cobblestone lissencephaly characterized by a constellation of brain malformations which can either exist alone or in conjunction with minimal muscular and ocular abnormalities. The clinical features of the disease include severe developmental delay, increased head circumference, hydrocephalus and seizures.","definition_xrefs":["Orphanet:352682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cobblestone lissencephaly","termid":"MONDO:0018869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cobblestone lissencephaly without muscular or ocular involvement","secondary_identifiers":["OMIM:615191","UMLS:C3554657","DOID:0112230","GARD:17526","MEDGEN:767571"],"synonyms":[{"name":"LIS5","type":"related"},{"name":"cobblestone lissencephaly without muscular or eye involvement","type":"exact"},{"name":"cobblestone lissencephaly without muscular or ocular involvement","type":"exact"},{"name":"lissencephaly 5","type":"related"},{"name":"lissencephaly type 2 without muscular or eye involvement","type":"exact"},{"name":"lissencephaly type 2 without muscular or ocular involvement","type":"exact"},{"name":"lissencephaly type 5","type":"exact"}],"termid":"MONDO:0014077","xrefs":{"Monarch":{"xref_id":"0014077"}}}


id: GO:0050939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of early stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of melanocyte differentiation","termid":"GO:0045634"},{"relation_name":"regulates","term_name":"early stripe melanocyte differentiation","termid":"GO:0050933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of early stripe melanocyte differentiation","synonyms":[{"name":"regulation of early stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050939"}


id: MONDO:0000503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized non-invasive adenocarcinoma of the lung measuring 3 cm or less. It is characterized by a pure lepidic growth pattern and the lack of stromal, vascular, or pleural invasion.","definition_xrefs":["NCIT:C136486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma in situ","termid":"MONDO:0003218"},{"relation_name":"is_a","term_name":"lung carcinoma in situ","termid":"MONDO:0004660"},{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung adenocarcinoma in situ","secondary_identifiers":["NCIT:C8748","MEDGEN:1620128","UMLS:C4521520","ONCOTREE:LAIS","DOID:0050870"],"synonyms":[{"name":"adenosquamous cell carcinoma in situ of lung","type":"related"},{"name":"adenosquamous cell carcinoma in situ of the lung","type":"related"},{"name":"bronchioalveolar carcinoma","type":"related"},{"name":"bronchioloalveolar carcinoma","type":"narrow"},{"name":"in situ pulmonary adenocarcinoma","type":"related"},{"name":"lung adenocarcinoma In situ","type":"exact"},{"name":"lung adenosquamous cell carcinoma in situ","type":"related"},{"name":"stage 0 adenosquamous cell carcinoma of lung","type":"related"},{"name":"stage 0 adenosquamous cell carcinoma of the lung","type":"related"},{"name":"stage 0 adenosquamous cell lung carcinoma","type":"related"},{"name":"stage 0 adenosquamous lung cancer","type":"related"},{"name":"stage 0 adenosquamous lung carcinoma aJCC v6","type":"related"},{"name":"stage 0 adenosquamous lung carcinoma aJCC v6 and v7","type":"related"},{"name":"stage 0 adenosquamous lung carcinoma aJCC v7","type":"related"}],"termid":"MONDO:0000503","xrefs":{"Monarch":{"xref_id":"0000503"}}}


id: GO:0034099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that recognizes ERAD-luminal misfolded substrates and brings them to the ubiquitination/extraction machinery. In yeast, this complex consists of Yos9p, Kar2p and Hrd3p proteins.","definition_xrefs":["PMID:16873065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"luminal surveillance complex","termid":"GO:0034099"}


id: PBO:0058641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6770-3","termid":"PBO:0058641"}


id: PBO:0074601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11B","termid":"PBO:0074601"}


id: MONDO:0008059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Naegeli-Franceschetti-Jadassohn (NFJ) syndrome is a rare ectodermal dysplasia that affects the skin, sweat glands, nails, and teeth.","definition_xrefs":["Orphanet:69087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Naegeli-Franceschetti-Jadassohn syndrome","secondary_identifiers":["UMLS:C0343111","MEDGEN:91010","icd11.foundation:352035640","MESH:C538331","OMIM:161000","GARD:3912","SCTID:239084001","DOID:0111528"],"synonyms":[{"name":"NAEGELI syndrome","type":"related"},{"name":"NAEGELI-Franceschetti-Jadassohn syndrome","type":"related"},{"name":"NFJ syndrome","type":"exact"},{"name":"NFJS","type":"related"},{"name":"Naegeli syndrome","type":"exact"},{"name":"Naegeli-Franceschetti-Jadassohn syndrome","type":"exact"},{"name":"Nfj syndrome","type":"related"},{"name":"reticular skin changes, dental anomalies, decreased function of sweat glands, strabismus, and optic atrophy","type":"related"}],"termid":"MONDO:0008059","xrefs":{"Monarch":{"xref_id":"0008059"}}}


id: MONDO:0014597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary immunodeficiency disease in which the cause of the disease is a mutation in the IRF7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 39","secondary_identifiers":["ICD10CM:D84.8","MEDGEN:904167","Orphanet:574918","OMIM:616345","SCTID:1269234000","DOID:0111969","UMLS:C4225358"],"synonyms":[{"name":"IMD39","type":"related"},{"name":"IRF7 primary immunodeficiency disease","type":"exact"},{"name":"immunodeficiency 39","type":"exact"},{"name":"immunodeficiency type 39","type":"exact"},{"name":"predisposition to severe viral infection due to IRF7 deficiency","type":"exact"},{"name":"primary immunodeficiency disease caused by mutation in IRF7","type":"exact"}],"termid":"MONDO:0014597","xrefs":{"Monarch":{"xref_id":"0014597"}}}


id: MONDO:0002397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm that arises from the liver. Representative examples include angiosarcoma, undifferentiated (embryonal) sarcoma, rhabdomyosarcoma, and leiomyosarcoma.","definition_xrefs":["NCIT:C4437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver cancer","termid":"MONDO:0002691"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"liver sarcoma","secondary_identifiers":["DOID:270","MEDGEN:87522","SCTID:254601002","UMLS:C0345906"],"synonyms":[{"name":"hepatic sarcoma","type":"exact"},{"name":"liver sarcoma","type":"exact"},{"name":"sarcoma of liver","type":"exact"},{"name":"sarcoma of the liver","type":"exact"}],"termid":"MONDO:0002397","xrefs":{"Monarch":{"xref_id":"0002397"}}}


id: GO:0008500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete glycine-, glutamate-, thienylcyclohexylpiperidine binding (obsolete GO:0008500)","synonyms":[{"name":"glycine-, glutamate-, thienylcyclohexylpiperidine binding","type":"exact"}],"termid":"GO:0008500"}


id: MONDO:0012821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 5","secondary_identifiers":["OMIM:612230","MEDGEN:393664","UMLS:C2677122"],"synonyms":[{"name":"CRCS5","type":"exact"},{"name":"colorectal cancer, susceptibility to, 5","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 10","type":"related"}],"termid":"MONDO:0012821","xrefs":{"Monarch":{"xref_id":"0012821"}}}


id: MONDO:0012417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal dominant form of heart-hand syndrome, first described in members of a Slovenian family, that is characterized by adult onset, progressive cardiac conduction disease, tachyarrhythmias that can lead to sudden death, dilated cardiomyopathy and brachydactyly, with the hands less severely affected than the feet. Muscle weakness and/or myopathic electromyographic findings have been observed in some cases.","definition_xrefs":["Orphanet:168796"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"heart-hand syndrome","termid":"MONDO:0016432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"heart-hand syndrome, Slovenian type","secondary_identifiers":["UMLS:C1857829","icd11.foundation:1814304618","OMIM:610140","MESH:C535852","GARD:9846","MEDGEN:341859","SCTID:721014007"],"synonyms":[{"name":"Cardiac conduction disease-dilated cardiomyopathy-brachydactyly syndrome","type":"exact"},{"name":"atriodigital dysplasia, Slovenian type","type":"exact"},{"name":"heart-hand syndrome, Slovenian type","type":"exact"}],"termid":"MONDO:0012417","xrefs":{"Monarch":{"xref_id":"0012417"}}}


id: GO:0030451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the alternative pathway of complement activation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation","termid":"GO:0030449"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"complement activation, alternative pathway","termid":"GO:0006957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of complement activation, alternative pathway","synonyms":[{"name":"regulation of complement cascade, alternative pathway","type":"exact"}],"termid":"GO:0030451"}


id: GO:0031983
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane or protein that forms a vesicle.","definition_xrefs":["GOC:mah","GOC:vesicles"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle lumen","termid":"GO:0043233"},{"relation_name":"part_of","term_name":"vesicle","termid":"GO:0031982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vesicle lumen","secondary_identifiers":["NIF_Subcellular:sao797538226"],"termid":"GO:0031983"}


id: PBO:0053945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1248","termid":"PBO:0053945"}


id: PBO:0011452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPs/CORVET complex subunit Vps11 (predicted)","termid":"PBO:0011452"}


id: GO:0071706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of any member of the TNF superfamily due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tumor necrosis factor superfamily cytokine production","synonyms":[{"name":"TNF superfamily production","type":"related"},{"name":"TNFSF cytokine production","type":"exact"}],"termid":"GO:0071706"}


id: PBO:0052875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 7-1","termid":"PBO:0052875"}


id: GO:0106379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-(d)RTP + H20 = 8-oxo-(d)RMP + diphosphate + H+.","definition_xrefs":["PMID:11139615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0047429"],"is_obsolete":false,"name":"8-oxo-(d)RTP hydrolase activity","secondary_identifiers":["Reactome:R-HSA-9731228"],"termid":"GO:0106379"}


id: PBO:0117159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH4 antisense RNA 1","termid":"PBO:0117159"}


id: PR:Q92342
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F8.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F8.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.04c","synonyms":[{"name":"Spom972h-SPAC1F8.04c","type":"exact"}],"termid":"PR:Q92342"}


id: GO:1904324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inhibitory G protein-coupled receptor phosphorylation.","definition_xrefs":["GOC:TermGenie","PMID:15937517","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of inhibitory G protein-coupled receptor phosphorylation","termid":"GO:1904323"},{"relation_name":"negatively_regulates","term_name":"inhibitory G protein-coupled receptor phosphorylation","termid":"GO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of inhibitory G protein-coupled receptor phosphorylation","synonyms":[{"name":"down regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"down-regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"downregulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"inhibition of inhibitory G-protein coupled receptor phosphorylation","type":"narrow"},{"name":"negative regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"}],"termid":"GO:1904324"}


id: MONDO:0800339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic syndrome","termid":"MONDO:0016120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngospasm, severe neonatal episodic","secondary_identifiers":["UMLS:C3149517","MEDGEN:460867"],"synonyms":[{"name":"SNEL","type":"exact"}],"termid":"MONDO:0800339","xrefs":{"Monarch":{"xref_id":"0800339"}}}


id: SO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000292 repetitive_element (obsolete SO:0000292)","termid":"SO:0000292"}


id: FYPO:0005067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane (DETA NONOate). Cells stop growing (and may die) at a concentration of 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane","synonyms":[{"name":"hypersensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane","type":"exact"},{"name":"sensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane during mitotic cell cycle","type":"related"},{"name":"sensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane during vegetative growth","type":"exact"},{"name":"sensitive to DETA NONOate","type":"exact"},{"name":"sensitive to diethylenetriamine NONOate","type":"exact"}],"termid":"FYPO:0005067"}


id: GO:0050608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD+ + vanillin = 2 H+ + NADH + vanillate.","definition_xrefs":["RHEA:13309","EC:1.2.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"vanillin dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05699","MetaCyc:1.2.1.67-RXN"],"synonyms":[{"name":"vanillin:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050608"}


id: PBO:0111918
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin binding repeats","termid":"PBO:0111918"}


id: GO:0038072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that contributes to conjugation with cellular fusion.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in conjugation with cellular fusion (obsolete GO:0038072)","synonyms":[{"name":"MAP2K activity involved in conjugation with cellular fusion","type":"exact"},{"name":"MAPKK activity involved in conjugation with cellular fusion","type":"exact"}],"termid":"GO:0038072"}


id: PBO:0003215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual-specificity MAP kinase phosphatase Pmp1","termid":"PBO:0003215"}


id: GO:0051052
data:
  {"annotated_genes":["SJAG_00823","SJAG_03097","SJAG_02104","SJAG_03438","SJAG_03720","SJAG_03300","SJAG_04457","SJAG_00266","SJAG_02162","SJAG_02822","SJAG_02214","SJAG_04205","SJAG_01068","SJAG_00247","SJAG_01210","SJAG_00364","SJAG_00995","SJAG_01205","SJAG_03048","SJAG_03997","SJAG_03957","SJAG_04671","SJAG_01584","SJAG_00573","SJAG_03160","SJAG_02724","SJAG_02592","SJAG_01677","SJAG_03695","SJAG_00100","SJAG_02074","SJAG_03624","SJAG_03219","SJAG_03417","SJAG_02194","SJAG_04855","SJAG_00369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[102679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[112068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[117149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[102683,109203,98097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[108280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[117577,112345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[112346,117578,103637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[94225,110491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000781"},{"annotations":[107717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[102689,89402,116535,106936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[102692,108668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[96079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090297"},{"annotations":[102693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[79749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045951"},{"annotations":[89341,106452,116719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120292"},{"annotations":[89403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[97513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"},{"annotations":[109390,110635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000018"},{"annotations":[73024,91251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000779"},{"annotations":[109626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"},{"annotations":[94716,116587,89510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010520"},{"annotations":[103541],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[77245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032210"},{"annotations":[108828,99685,103542,106950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[102593,115328,99686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[99687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[102594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"},{"annotations":[116536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving DNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00247":null,"SJAG_00266":null,"SJAG_00364":null,"SJAG_00369":null,"SJAG_00573":null,"SJAG_00823":null,"SJAG_00995":null,"SJAG_01068":null,"SJAG_01205":null,"SJAG_01210":null,"SJAG_01584":null,"SJAG_01677":null,"SJAG_02074":null,"SJAG_02104":null,"SJAG_02162":null,"SJAG_02194":null,"SJAG_02214":null,"SJAG_02592":null,"SJAG_02724":null,"SJAG_02822":null,"SJAG_03048":null,"SJAG_03097":null,"SJAG_03160":null,"SJAG_03219":null,"SJAG_03300":null,"SJAG_03417":null,"SJAG_03438":null,"SJAG_03624":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03957":null,"SJAG_03997":null,"SJAG_04205":null,"SJAG_04457":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA metabolism","type":"exact"}],"termid":"GO:0051052","terms_by_termid":{"GO:0000018":null,"GO:0010520":null,"GO:0010569":null,"GO:0010845":null,"GO:0010846":null,"GO:0011000":null,"GO:0031582":null,"GO:0032210":null,"GO:0032215":null,"GO:0045128":null,"GO:0045739":null,"GO:0045951":null,"GO:0062209":null,"GO:0071807":null,"GO:0090001":null,"GO:0090297":null,"GO:0120292":null,"GO:1902681":null,"GO:1903464":null,"GO:1903465":null,"GO:1903467":null,"GO:1903468":null,"GO:1904332":null,"GO:1904514":null,"GO:1905263":null,"GO:2000779":null,"GO:2000781":null,"GO:2001033":null,"GO:2001034":null}}


id: PBO:0047536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 2","termid":"PBO:0047536"}


id: GO:0044439
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a peroxisome, a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal part (obsolete GO:0044439)","synonyms":[{"name":"peroxisome component","type":"exact"}],"termid":"GO:0044439"}


id: PBO:0061052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPBL divergent transcript","termid":"PBO:0061052"}


id: GO:0033789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 1,4-benzoquinone + H2O + phenylacetyl-CoA = 2 hydroquinone + phenylglyoxylyl-CoA.","definition_xrefs":["RHEA:15705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor","termid":"GO:0033695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenylacetyl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:1.17.5.1-RXN","EC:1.17.5.1","KEGG_REACTION:R07222"],"synonyms":[{"name":"phenylacetyl-CoA:acceptor oxidoreductase activity","type":"related"},{"name":"phenylacetyl-CoA:quinone oxidoreductase activity","type":"related"}],"termid":"GO:0033789"}


id: PBO:0041442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C9orf78 pseudogene 1","termid":"PBO:0041442"}


id: GO:0031416
data:
  {"annotated_genes":["SJAG_03045","SJAG_01826"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70916,78247],"is_not":false,"summary":null,"term":"GO:0031416"}]},"cv_name":"cellular_component","definition":"A conserved complex that catalyzes the transfer of an acetyl group to the N-terminal residue of a protein acceptor molecule that has a Met-Glu, Met-Asp, Met-Asn, or Met-Met N-terminus. In Saccharomyces the complex includes Nat3p and Mdm20p.","definition_xrefs":["PMID:12890471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein acetyltransferase complex","termid":"GO:0031414"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01826":null,"SJAG_03045":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NatB complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"N-terminal acetyltransferase B complex","type":"exact"}],"termid":"GO:0031416","terms_by_termid":{"GO:0031416":null}}


id: PBO:0108992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ type DNA helicase, N-terminal truncated compared to other tlh genes","termid":"PBO:0108992"}


id: PBO:0027376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_fragmented_nuclear_envelope_and_nuclear_pore_aggregation_in_cytoplasm_during_mitotic_telophase","termid":"PBO:0027376"}


id: PBO:0075349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerostin domain containing 1","termid":"PBO:0075349"}


id: GO:0042543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The glycosylation of protein via peptidyl-arginine, omega-N-glycosyl-L-arginine.","definition_xrefs":["RESID:AA0327"],"gene_count":0,"genotype_count":0,"name":"obsolete protein N-linked glycosylation via arginine (obsolete GO:0042543)","termid":"GO:0042543"}


id: GO:0044508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with glucagon-like peptide 1 and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["GOC:jl","PMID:12529935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"glucagon-like peptide 1 receptor activity","termid":"GO:0044508"}


id: PBO:0080677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHAMM pseudogene 4","termid":"PBO:0080677"}


id: SO:0002267
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the retrovirus superfamily are similar to LTR retrotransposons in the Gypsy and Bel-Pao superfamilies. Mainly described in vertebrate animals, this superfamily contain elements coding for specific proteins in this order: GAG, AP, RT, RH, INT, and ENV. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H. ENV is envelop protein.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Retrovirus_LTR_retrotransposon","synonyms":[{"name":"RLR retrotransposon","type":"exact"},{"name":"Retrovirus LTR retrotransposon","type":"exact"}],"termid":"SO:0002267"}


id: MONDO:0016870
data:
  {"annotated_genes":["SJAG_01548","SJAG_03424"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86075,86074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 5 disorder","termid":"MONDO:0700012"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01548":null,"SJAG_03424":null},"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20793","UMLS:C5679649","MEDGEN:1825959","Orphanet:261786"],"synonyms":[{"name":"partial deletion of chromosome type 5","type":"exact"},{"name":"partial monosomy of chromosome 5","type":"exact"}],"termid":"MONDO:0016870","terms_by_termid":{"MONDO:0007925":null},"xrefs":{"Monarch":{"xref_id":"0016870"}}}


id: MONDO:0018037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that is characterized by elevated serum IgE, dermatitis, and respiratory infections.","definition_xrefs":["NCIT:C3144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperimmunoglobulin syndrome","termid":"MONDO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"hyper-IgE syndrome","secondary_identifiers":["DOID:0080545","OMIMPS:147060","Orphanet:331223","GARD:10956","icd11.foundation:223461798","UMLS:C3887645","NANDO:1200340","MEDGEN:854488","NANDO:2200713"],"synonyms":[{"name":"HIES","type":"exact"},{"name":"hyper-IgE recurrent infection syndrome","type":"exact"},{"name":"hyperimmunoglobulin E syndrome","type":"exact"}],"termid":"MONDO:0018037","xrefs":{"Monarch":{"xref_id":"0018037"}}}


id: GO:0045444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat.","definition_xrefs":["GOC:go_curators","CL:0000136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fat cell differentiation","synonyms":[{"name":"adipocyte cell differentiation","type":"exact"},{"name":"adipocyte differentiation","type":"exact"},{"name":"adipogenesis","type":"related"},{"name":"adipose cell differentiation","type":"exact"}],"termid":"GO:0045444"}


id: GO:0042118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of an endothelial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:mgi_curators","PMID:12851652","ISBN:0781735149","PMID:14581484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell activation","termid":"GO:0042118"}


id: PBO:0000045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase publication types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"null","termid":"PBO:0000045"}


id: PATO:0000366
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the north when it faces east.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"left","termid":"PATO:0000366"}


id: GO:0035188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The emergence of an immature organism from a protective structure.","definition_xrefs":["GOC:dgh","GOC:isa_complete","ISBN:0198612001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organism emergence from protective structure","termid":"GO:0071684"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hatching","termid":"GO:0035188"}


id: PATO:0001185
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering in a bearer by virtue of the bearer's indirect development, undergoing metamorphosis.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Larval"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"larval","termid":"PATO:0001185"}


id: PATO:0001527
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sound amplitude which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sound quality","termid":"PATO:0001519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quiet","termid":"PATO:0001527"}


id: PBO:0057298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 513b","termid":"PBO:0057298"}


id: GO:0006558
data:
  {"annotated_genes":["SJAG_03124","SJAG_03312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78271,98669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-phenylalanine, the L-enantiomer of 2-amino-3-phenylpropanoic acid, i.e. (2S)-2-amino-3-phenylpropanoic acid.","definition_xrefs":["GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process","termid":"GO:1902221"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03124":null,"SJAG_03312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-phenylalanine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8964208"],"synonyms":[{"name":"L-phenylalanine metabolism","type":"exact"},{"name":"phenylalanine metabolic process","type":"broad"},{"name":"phenylalanine metabolism","type":"broad"}],"termid":"GO:0006558","terms_by_termid":{"GO:0009094":null}}


id: GO:0035824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gene conversion process in which a segment of more than 1000 base pairs is transferred from the donor to the acceptor.","definition_xrefs":["PMID:16954385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"long tract gene conversion","termid":"GO:0035824"}


id: SO:0002097
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene derived from a vertebrate immune system gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogene","termid":"SO:0000336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immune_system_pseudogene","synonyms":[{"name":"vertebrate immune system pseudogene","type":"exact"}],"termid":"SO:0002097"}


id: MONDO:0005810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by an increase in mononuclear white blood cells and swollen lymph nodes, which is usually caused by infection with the Epstein-Barr virus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Epstein-Barr virus infection","termid":"MONDO:0005111"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious mononucleosis","secondary_identifiers":["MESH:D007244","icd11.foundation:760139952","NANDO:1200668","NCIT:C34726","ICD9:075","SCTID:186668002","EFO:0007326","DOID:8568","NANDO:2200976","UMLS:C0021345","MEDGEN:7069"],"synonyms":[{"name":"Filatov's disease","type":"exact"},{"name":"Gammaherpesviral mononucleosis","type":"exact"},{"name":"Mono","type":"exact"},{"name":"Pfeiffer's disease","type":"exact"},{"name":"glandular fever","type":"exact"},{"name":"monocytic angina","type":"exact"},{"name":"mononucleosis","type":"exact"}],"termid":"MONDO:0005810","xrefs":{"Monarch":{"xref_id":"0005810"}}}


id: PBO:0062742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily H member 1","termid":"PBO:0062742"}


id: PBO:0048374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated regulator of MAPK1 subtype 2","termid":"PBO:0048374"}


id: PBO:0108936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 15","termid":"PBO:0108936"}


id: FYPO:0006604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic tRNA transcription unit occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased replication fork arrest at tRNA locus","synonyms":[{"name":"decreased replication fork arrest at tRNA genes","type":"exact"},{"name":"decreased replication fork arrest at tRNA locus during mitotic cell cycle","type":"related"},{"name":"decreased replication fork arrest at tRNA locus during vegetative growth","type":"exact"},{"name":"reduced replication fork arrest at tRNA locus","type":"exact"}],"termid":"FYPO:0006604"}


id: PBO:0072841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 pseudogene 1","termid":"PBO:0072841"}


id: PBO:0061256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch receptor 1","termid":"PBO:0061256"}


id: SO:0001884
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature translocation where the region contains a regulatory region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_translocation","termid":"SO:0001881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_translocation","synonyms":[{"name":"regulatory region translocation","type":"exact"}],"termid":"SO:0001884"}


id: FYPO:0000909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during meiosis","termid":"FYPO:0002957"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome","termid":"FYPO:0004996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to linear element","synonyms":[{"name":"abnormal protein localisation to linear element","type":"exact"}],"termid":"FYPO:0000909"}


id: FYPO:0004903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cell separation after cytokinesis RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Cell separation after cytokinesis RNAs are transcribed from genes whose products are involved in cell separation after cytokinesis.","definition_xrefs":["PomBase:mah","PMID:25530312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of cell separation after cytokinesis gene mRNA during vegetative growth","synonyms":[{"name":"decreased cell separation after cytokinesis gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of cell separation after cytokinesis gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of cell separation after cytokinesis gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of cell separation after cytokinesis gene transcripts during vegetative growth","type":"exact"},{"name":"decreased level of cytokinetic cell separation gene mRNA during vegetative growth","type":"related"},{"name":"reduced level of cell separation after cytokinesis gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004903"}


id: PBO:0064994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 1","termid":"PBO:0064994"}


id: GO:0019973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-13.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-13 binding","synonyms":[{"name":"IL-13 binding","type":"exact"}],"termid":"GO:0019973"}


id: FYPO:0007838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide alpha-N-acetyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:34019809","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal peptide alpha-N-acetyltransferase activity","synonyms":[{"name":"normal NAT activity","type":"related"},{"name":"normal protein N-terminal acetyltransferase activity","type":"exact"}],"termid":"FYPO:0007838"}


id: PBO:0027894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_methyltransferase_activity_(H3-K4_specific)","termid":"PBO:0027894"}


id: PBO:0001617
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.41","termid":"PBO:0001617"}


id: GO:0016720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a (9Z)-octadec-9-en-12-ynoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"acyl-lipid Delta(12)-acetylenase","secondary_identifiers":["EC:1.14.19.39","KEGG_REACTION:R05740","MetaCyc:1.14.99.33-RXN"],"synonyms":[{"name":"D12-fatty acid dehydrogenase activity","type":"exact"},{"name":"Delta12 fatty acid acetylenase","type":"exact"},{"name":"delta12-fatty acid dehydrogenase activity","type":"related"},{"name":"linoleate delta-12-fatty acid acetylenase (desaturase) activity","type":"exact"}],"termid":"GO:0016720"}


id: FYPO:0006679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing chromium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000257","FYPO:0000139","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on chromium","synonyms":[{"name":"normal cell population growth in presence of chromium","type":"exact"},{"name":"normal cell population growth on chromium","type":"exact"},{"name":"normal cell population growth on chromium ion","type":"exact"},{"name":"normal cellular response to chromium","type":"related"},{"name":"normal growth on chromium ions","type":"exact"},{"name":"normal vegetative cell population growth on chromium","type":"exact"}],"termid":"FYPO:0006679"}


id: PBO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn4","termid":"PBO:0000803"}


id: GO:0008675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-gluconate 6-phosphate = pyruvate + D-glyceraldehyde 3-phosphate.","definition_xrefs":["EC:4.1.2.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-phosphogluconate aldolase activity","secondary_identifiers":["RHEA:17089","MetaCyc:KDPGALDOL-RXN"],"synonyms":[{"name":"2-dehydro-3-deoxy-D-gluconate-6-phosphate D-glyceraldehyde-3-phosphate-lyase (pyruvate-forming)","type":"related"},{"name":"2-dehydro-3-deoxy-D-gluconate-6-phosphate D-glyceraldehyde-3-phosphate-lyase activity","type":"related"},{"name":"2-keto-3-deoxy-6-phosphogluconate aldolase activity","type":"related"},{"name":"2-keto-3-deoxy-6-phosphogluconic aldolase activity","type":"related"},{"name":"2-keto-3-deoxygluconate-6-P-aldolase activity","type":"related"},{"name":"2-keto-3-deoxygluconate-6-phosphate aldolase activity","type":"related"},{"name":"2-oxo-3-deoxy-6-phosphogluconate aldolase activity","type":"related"},{"name":"6-phospho-2-keto-3-deoxygluconate aldolase activity","type":"related"},{"name":"KDPG aldolase activity","type":"related"},{"name":"KDPG-aldolase activity","type":"related"},{"name":"ODPG aldolase activity","type":"related"},{"name":"phospho-2-dehydro-3-deoxygluconate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxygluconate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxygluconic aldolase activity","type":"related"}],"termid":"GO:0008675"}


id: GO:0002890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an immunoglobulin mediated immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of B cell mediated immunity","termid":"GO:0002713"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"negatively_regulates","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of immunoglobulin mediated immune response","synonyms":[{"name":"down regulation of immunoglobulin mediated immune response","type":"exact"},{"name":"down-regulation of immunoglobulin mediated immune response","type":"exact"},{"name":"downregulation of immunoglobulin mediated immune response","type":"exact"},{"name":"inhibition of immunoglobulin mediated immune response","type":"narrow"}],"termid":"GO:0002890"}


id: PBO:0084071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase required for ribosomal subunit synthesis and rRNA processing; required for synthesis of 40S ribosomal subunits and for processing the 35S pre-rRNA at sites A0, A1, and A2; interacts with Rcl1p, which stimulates its GTPase and U3 snoRNA binding activities; has similarity to Tsr1p","termid":"PBO:0084071"}


id: MONDO:0017228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 autoimmune pancreatitis is a form of autoimmune pancreatitis (see this term) affecting both sexes and having a younger age of onset (<60 years) and presenting with abdominal pain, steatorrhea and obstructive jaundice.","definition_xrefs":["Orphanet:280315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune pancreatitis","termid":"MONDO:0015175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune pancreatitis type 2","secondary_identifiers":["MEDGEN:1679984","UMLS:C5197785","GARD:21077"],"synonyms":[{"name":"AIP type 2","type":"exact"},{"name":"duct-centric pancreatitis","type":"exact"}],"termid":"MONDO:0017228","xrefs":{"Monarch":{"xref_id":"0017228"}}}


id: PBO:0030115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_processing","termid":"PBO:0030115"}


id: PBO:0058396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4768","termid":"PBO:0058396"}


id: MONDO:0013200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the VCL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 15","secondary_identifiers":["MEDGEN:413312","OMIM:613255","MESH:C567681","UMLS:C2750459","DOID:0110321"],"synonyms":[{"name":"CMH15","type":"exact"},{"name":"VCL hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 15","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 15","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 15","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 15","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in VCL","type":"exact"},{"name":"hypertrophic cardiomyopathy type 15","type":"exact"}],"termid":"MONDO:0013200","xrefs":{"Monarch":{"xref_id":"0013200"}}}


id: PBO:0065018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 2 pseudogene 2","termid":"PBO:0065018"}


id: MONDO:0858960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A posterior pituitary benign neoplasm that is characterized by the presence of spindle cells with eosinophilic, granular cytoplasm forming fascicles.","definition_xrefs":["DOID:0081306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior pituitary gland neoplasm","termid":"MONDO:0003257"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle cell oncocytoma","secondary_identifiers":["NCIT:C94537","UMLS:C2986561","MEDGEN:458787"],"termid":"MONDO:0858960","xrefs":{"Monarch":{"xref_id":"0858960"}}}


id: PBO:0018192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner nuclear membrane protein Ima1","termid":"PBO:0018192"}


id: PBO:0034727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cereviaie YER035W and YGL222C","termid":"PBO:0034727"}


id: PR:Q9HFF2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC683.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HFF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C683.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC683.02c","synonyms":[{"name":"Spom972h-SPAC683.02c","type":"exact"}],"termid":"PR:Q9HFF2"}


id: PBO:0083346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene DDR48/YML173W","termid":"PBO:0083346"}


id: PBO:0049343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 1","termid":"PBO:0049343"}


id: PR:O60059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein C56F2.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.08c","synonyms":[{"name":"Spom972h-puf1","type":"exact"}],"termid":"PR:O60059"}


id: MONDO:0015244
data:
  {"annotated_genes":["SJAG_04533","SJAG_04622","SJAG_02242","SJAG_01945","SJAG_01168","SJAG_04233","SJAG_03393","SJAG_03923","SJAG_00059","SJAG_00380","SJAG_04641","SJAG_00645","SJAG_03862","SJAG_04822","SJAG_05212","SJAG_04418","SJAG_02680","SJAG_00863","SJAG_01286","SJAG_00933"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014744"},{"annotations":[85783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014557"},{"annotations":[86660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012784"},{"annotations":[87380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013392"},{"annotations":[87060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014503"},{"annotations":[85519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008943"},{"annotations":[85632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014601"},{"annotations":[86808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044720"},{"annotations":[85374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014104"},{"annotations":[87136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[85898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100340"},{"annotations":[85777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033115"},{"annotations":[85848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032923"},{"annotations":[86916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030312"},{"annotations":[86678,86679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030318"},{"annotations":[86685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030323"},{"annotations":[85956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011801"},{"annotations":[86966,86967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018996"}]},"cv_name":"mondo","definition":"Autosomal recessive cerebellar ataxias (ARCA) are a heterogeneous group of rare neurological disorders involving both the central and peripheral nervous system (and in some cases other systems and organs), and characterized by degeneration or abnormal development of the cerebellum and spinal cord and, in most cases, early onset occurring before the age of 20 years.","definition_xrefs":["Orphanet:1172"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"obsolete ataxia with dementia (obsolete MONDO:0020138)","termid":"MONDO:0020138"},{"relation_name":"excluded_subClassOf","term_name":"hereditary ataxia","termid":"MONDO:0100309"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia","termid":"MONDO:0100310"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_00380":null,"SJAG_00645":null,"SJAG_00863":null,"SJAG_00933":null,"SJAG_01168":null,"SJAG_01286":null,"SJAG_01945":null,"SJAG_02242":null,"SJAG_02680":null,"SJAG_03393":null,"SJAG_03862":null,"SJAG_03923":null,"SJAG_04233":null,"SJAG_04418":null,"SJAG_04533":null,"SJAG_04622":null,"SJAG_04641":null,"SJAG_04822":null,"SJAG_05212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive cerebellar ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18718","UMLS:C5575375","MEDGEN:1843058","DOID:0050950","OMIMPS:213200"],"synonyms":[{"name":"ARCA","type":"exact"},{"name":"arca","type":"exact"},{"name":"cerebellar ataxia, autosomal recessive","type":"exact"}],"termid":"MONDO:0015244","terms_by_termid":{"MONDO:0008943":null,"MONDO:0011402":null,"MONDO:0011801":null,"MONDO:0012784":null,"MONDO:0013392":null,"MONDO:0014104":null,"MONDO:0014503":null,"MONDO:0014557":null,"MONDO:0014601":null,"MONDO:0014744":null,"MONDO:0018996":null,"MONDO:0030312":null,"MONDO:0030318":null,"MONDO:0030323":null,"MONDO:0032923":null,"MONDO:0033115":null,"MONDO:0044720":null,"MONDO:0100340":null},"xrefs":{"Monarch":{"xref_id":"0015244"}}}


id: GO:0051117
data:
  {"annotated_genes":["SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74362],"is_not":false,"summary":null,"term":"GO:0051117"}]},"cv_name":"molecular_function","definition":"Binding to an ATPase, any enzyme that catalyzes the hydrolysis of ATP.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ATPase binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0051117","terms_by_termid":{"GO:0051117":null}}


id: PBO:0059622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP8 pseudogene 3","termid":"PBO:0059622"}


id: CHEBI:34653
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Congo Red","termid":"CHEBI:34653"}


id: PBO:0040665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 12","termid":"PBO:0040665"}


id: GO:0035356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of triglyceride within a cell.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"},{"relation_name":"is_a","term_name":"triglyceride homeostasis","termid":"GO:0070328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular triglyceride homeostasis","synonyms":[{"name":"cellular triglyceride homeostasis","type":"exact"}],"termid":"GO:0035356"}


id: PBO:0028931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_non-growing_cell_tip","termid":"PBO:0028931"}


id: SO:0001269
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a signal recognition particle (SRP) RNA.","direct_ancestors":[{"relation_name":"has_quality","term_name":"SRP_RNA_encoding","termid":"SO:0000642"},{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP_RNA_gene","synonyms":[{"name":"SRP RNA gene","type":"exact"}],"termid":"SO:0001269"}


id: MONDO:0005363
data:
  {"annotated_genes":["SJAG_04001","SJAG_00118","SJAG_04621","SJAG_01143"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[86290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013589"},{"annotations":[87224,87225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014462"}]},"cv_name":"mondo","definition":"An instance of focal segmental glomerulosclerosis that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"},{"relation_name":"is_a","term_name":"focal segmental glomerulosclerosis","termid":"MONDO:0100313"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null,"SJAG_04001":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"inherited focal segmental glomerulosclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200722","OMIMPS:603278","NANDO:2200113"],"termid":"MONDO:0005363","terms_by_termid":{"MONDO:0011303":null,"MONDO:0013589":null,"MONDO:0014462":null},"xrefs":{"Monarch":{"xref_id":"0005363"}}}


id: PBO:0075194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 6","termid":"PBO:0075194"}


id: GO:0014715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process taking place in the trunk whereby the developmental fate of a cell becomes restricted such that it will develop into a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fate commitment","termid":"GO:0048625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate commitment in trunk","termid":"GO:0014715"}


id: PR:O14220
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu26 gene.","definition_xrefs":["UniProtKB:O14220","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 26 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.16","synonyms":[{"name":"Spom972h-meu26","type":"exact"}],"termid":"PR:O14220"}


id: PBO:0063581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo ribosomal biogenesis factor 1 pseudogene 1","termid":"PBO:0063581"}


id: GO:1904668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ubiquitin protein ligase activity.","definition_xrefs":["GOC:TermGenie","PMID:10921876","GOC:dph","PMID:26216882","GOC:vw","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ubiquitin-protein transferase activity","termid":"GO:0051443"},{"relation_name":"is_a","term_name":"regulation of ubiquitin protein ligase activity","termid":"GO:1904666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of ubiquitin protein ligase activity","secondary_identifiers":["GO:0007092","GO:1903835","GO:0090623","GO:0051488"],"synonyms":[{"name":"activation of APC-Cdc20 complex activity","type":"narrow"},{"name":"activation of APC-fizzy related complex activity","type":"narrow"},{"name":"activation of E3","type":"related"},{"name":"activation of anaphase-promoting complex activity","type":"narrow"},{"name":"activation of protein ubiquitination activity","type":"narrow"},{"name":"activation of ubiquitin ligase activity","type":"narrow"},{"name":"activation of ubiquitin protein ligase activity","type":"narrow"},{"name":"positive regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"positive regulation of E3","type":"related"},{"name":"positive regulation of protein ubiquitination activity","type":"exact"},{"name":"positive regulation of ubiquitin ligase activity","type":"related"},{"name":"up regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"up regulation of E3","type":"related"},{"name":"up regulation of protein ubiquitination activity","type":"exact"},{"name":"up regulation of ubiquitin ligase activity","type":"exact"},{"name":"up regulation of ubiquitin protein ligase activity","type":"exact"},{"name":"up-regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"up-regulation of E3","type":"related"},{"name":"up-regulation of protein ubiquitination activity","type":"exact"},{"name":"up-regulation of ubiquitin ligase activity","type":"exact"},{"name":"up-regulation of ubiquitin protein ligase activity","type":"exact"},{"name":"upregulation of APC-fizzy related complex activity","type":"narrow"},{"name":"upregulation of E3","type":"related"},{"name":"upregulation of protein ubiquitination activity","type":"exact"},{"name":"upregulation of ubiquitin ligase activity","type":"exact"},{"name":"upregulation of ubiquitin protein ligase activity","type":"exact"}],"termid":"GO:1904668"}


id: GO:0052460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates the frequency, rate or extent of the release of nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host-mediated perturbation of symbiont process","termid":"GO:0051851"},{"relation_name":"part_of","term_name":"acquisition of nutrients from symbiont","termid":"GO:0051850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of nutrient release by symbiont","synonyms":[{"name":"modulation by host of nutrient release from symbiont","type":"exact"}],"termid":"GO:0052460"}


id: MONDO:0032650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration, childhood-onset, with cerebellar atrophy","secondary_identifiers":["OMIM:618276","UMLS:C4748934","MEDGEN:1648286"],"synonyms":[{"name":"CONDCA","type":"exact"}],"termid":"MONDO:0032650","xrefs":{"Monarch":{"xref_id":"0032650"}}}


id: GO:2001121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a coenzyme gamma-F420-2.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme gamma-F420-2 metabolic process","termid":"GO:0052649"},{"relation_name":"is_a","term_name":"tricarboxylic acid biosynthetic process","termid":"GO:0072351"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"coenzyme gamma-F420-2 biosynthetic process","synonyms":[{"name":"coenzyme gamma-F420-2 biosynthesis","type":"exact"}],"termid":"GO:2001121"}


id: GO:1905878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disaggregation of an invadopodium into its constituent components.","definition_xrefs":["PMID:15684033","GOC:TermGenie","GO_REF:0000079"],"gene_count":0,"genotype_count":0,"name":"obsolete invadopodium disassembly (obsolete GO:1905878)","termid":"GO:1905878"}


id: PBO:0072631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine and serine rich coiled-coil 1","termid":"PBO:0072631"}


id: FYPO:0004049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione peroxidase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutathione peroxidase activity","termid":"FYPO:0004048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000002","FYPO:0005447","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased glutathione peroxidase activity","termid":"FYPO:0004049"}


id: MONDO:0044843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dystonic disorder","termid":"MONDO:0003441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"torsion dystonia","secondary_identifiers":["UMLS:C0013423","MEDGEN:3941","SCTID:431034009"],"synonyms":[{"name":"torsion dystonia","type":"exact"}],"termid":"MONDO:0044843","xrefs":{"Monarch":{"xref_id":"0044843"}}}


id: FYPO:0004662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal viability following cellular response to UV","synonyms":[{"name":"normal cell population viability following cellular response to UV","type":"exact"},{"name":"normal viability following UV exposure","type":"exact"},{"name":"normal viability following cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0004662"}


id: MONDO:0037253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A stromal tumor that arises from the ovary and is characterized by the presence of cells that contain lipid and resemble theca cells. The vast majority of cases are benign.","definition_xrefs":["NCIT:C66989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian sex cord-stromal tumor","termid":"MONDO:0021657"},{"relation_name":"is_a","term_name":"thecoma","termid":"MONDO:0037252"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian thecoma","secondary_identifiers":["MEDGEN:364155","SCTID:254864005","UMLS:C1882229"],"synonyms":[{"name":"ovarian theca cell neoplasm","type":"exact"},{"name":"ovarian theca cell tumor","type":"exact"},{"name":"ovarian theca cell tumour","type":"exact"},{"name":"ovarian thecoma","type":"exact"},{"name":"ovary thecoma","type":"exact"},{"name":"theca cell neoplasm of ovary","type":"exact"},{"name":"theca cell neoplasm of the ovary","type":"exact"},{"name":"theca cell tumor of ovary","type":"exact"},{"name":"theca cell tumor of the ovary","type":"exact"},{"name":"theca cell tumour of ovary","type":"exact"},{"name":"theca cell tumour of the ovary","type":"exact"},{"name":"thecoma of ovary","type":"exact"},{"name":"thecoma of the ovary","type":"exact"}],"termid":"MONDO:0037253","xrefs":{"Monarch":{"xref_id":"0037253"}}}


id: MONDO:0004216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germinoma that arises from the pineal gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant pineal area germ cell neoplasm","termid":"MONDO:0002073"},{"relation_name":"is_a","term_name":"brain germinoma","termid":"MONDO:0002214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal region germinoma","secondary_identifiers":["MEDGEN:208928","NCIT:C8712","DOID:7428","GARD:19162","Orphanet:91352","UMLS:C0854912"],"synonyms":[{"name":"germinoma","type":"broad"},{"name":"pineal germinoma","type":"exact"}],"termid":"MONDO:0004216","xrefs":{"Monarch":{"xref_id":"0004216"}}}


id: PBO:0046508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 3","termid":"PBO:0046508"}


id: GO:0003204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cardiac skeleton over time, from its formation to the mature structure. The cardiac skeleton is a specialized extracellular matrix that separates the atria from the ventricles and provides physical support for the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac skeleton development","synonyms":[{"name":"heart fibrous skeleton development","type":"exact"}],"termid":"GO:0003204"}


id: FYPO:0002563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear periphery is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to nuclear periphery","synonyms":[{"name":"normal protein localisation to nuclear periphery","type":"exact"},{"name":"normal protein localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nuclear periphery during vegetative growth","type":"exact"}],"termid":"FYPO:0002563"}


id: MONDO:0018562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary otorhinolaryngological malformation (obsolete MONDO:0018562)","secondary_identifiers":["Orphanet:435603"],"synonyms":[{"name":"genetic otorhinolaryngological malformation","type":"exact"}],"termid":"MONDO:0018562","xrefs":{"Monarch":{"xref_id":"0018562"}}}


id: MONDO:0003835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the cardia of stomach.","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cardia carcinoma","termid":"MONDO:0003834"},{"relation_name":"is_a","term_name":"gastric adenocarcinoma","termid":"MONDO:0005036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastric cardia adenocarcinoma","secondary_identifiers":["UMLS:C1333762","MEDGEN:232543","NCIT:C5247","DOID:6271"],"synonyms":[{"name":"adenocarcinoma of cardia of stomach","type":"exact"},{"name":"adenocarcinoma of gastric cardia","type":"related"},{"name":"adenocarcinoma of the cardia of the stomach","type":"exact"},{"name":"adenocarcinoma of the gastric cardia","type":"exact"},{"name":"cardia of stomach adenocarcinoma","type":"exact"}],"termid":"MONDO:0003835","xrefs":{"Monarch":{"xref_id":"0003835"}}}


id: PBO:0091921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf antidote-like meiotic drive suppressor Wtf10","termid":"PBO:0091921"}


id: PBO:0081425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 280C","termid":"PBO:0081425"}


id: PBO:0052751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 43","termid":"PBO:0052751"}


id: PBO:0086225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that functions in mitochondrial copper homeostasis; mitochondrial intermembrane space protein; essential for functional cytochrome oxidase expression; homologous to Cox17p; contains twin cysteine-x9-cysteine motifs","termid":"PBO:0086225"}


id: GO:0051907
data:
  {"annotated_genes":["SJAG_05256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95869],"is_not":false,"summary":null,"term":"GO:0051907"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(hydroxymethyl)glutathione = formaldehyde + glutathione.","definition_xrefs":["EC:4.4.1.22","RHEA:22488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R06982","UM-BBD_reactionID:r1145","MetaCyc:RXN-2961"],"synonyms":[{"name":"Gfa","type":"related"},{"name":"S-(hydroxymethyl)glutathione formaldehyde-lyase (glutathione-forming)","type":"related"},{"name":"S-(hydroxymethyl)glutathione formaldehyde-lyase activity","type":"related"},{"name":"glutathione-dependent formaldehyde-activating enzyme activity","type":"exact"}],"termid":"GO:0051907","terms_by_termid":{"GO:0051907":null}}


id: FYPO:0000232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the actomyosin contractile ring splits upon initiation of contraction during anaphase B, resulting in the formation of a primary ring that undergoes constriction and a secondary ring that does not constrict.","definition_xrefs":["PomBase:mah","PMID:18272786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring morphology","termid":"FYPO:0003338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0004803","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"split actomyosin contractile ring","synonyms":[{"name":"abnormal contractile ring contraction with contractile ring splitting","type":"related"},{"name":"actomyosin contractile ring splitting","type":"related"},{"name":"actomyosin contractile ring splitting upon contraction","type":"related"},{"name":"cytokinesis defects, splitting of the actinomyosin ring","type":"related"},{"name":"split actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"split actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"split cytokinetic contractile ring","type":"exact"},{"name":"split mitotic contractile ring","type":"exact"}],"termid":"FYPO:0000232"}


id: PBO:0042231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 3 (pseudogene)","termid":"PBO:0042231"}


id: PBO:0086649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus; YCR087C-A is not an essential gene","termid":"PBO:0086649"}


id: MONDO:0009510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Laron syndrome with immunodeficiency (obsolete MONDO:0009510)","termid":"MONDO:0009510","xrefs":{"Monarch":{"xref_id":"0009510"}}}


id: PBO:0091399
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.2588021_2588022insA","termid":"PBO:0091399"}


id: SO:0000110
data:
  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id: MONDO:0012913
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id: PBO:0001596
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  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"destabilized in the absence of Pcf1","termid":"PBO:0001596"}


id: MONDO:0011543
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete BRCA3 (obsolete MONDO:0011543)","secondary_identifiers":["MESH:C565336","OMIM:605365"],"synonyms":[{"name":"BRCA3","type":"exact"},{"name":"Brcax","type":"related"},{"name":"breast cancer 3","type":"related"},{"name":"moved to 114480","type":"related"}],"termid":"MONDO:0011543","xrefs":{"Monarch":{"xref_id":"0011543"}}}


id: FYPO:0008260
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is decreased, and the localizatiion to the endoplasmic reticulum is increased. The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PMID:22848669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell surface","termid":"FYPO:0008258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to cell surface, protein mislocalized to endoplasmic reticulum","termid":"FYPO:0008260"}


id: PBO:0058032
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4253","termid":"PBO:0058032"}


id: MONDO:0002094
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete conjunctival squamous cell carcinoma (obsolete MONDO:0002094)","termid":"MONDO:0002094","xrefs":{"Monarch":{"xref_id":"0002094"}}}


id: MOD:01871
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cyclizes an S-carboxamidomethyl-L-cysteine residue to (R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid with the loss of ammonia.","definition_xrefs":["DeltaMass:336","PubMed:12643538","Unimod:26"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxamidomethyl-L-cysteine","termid":"MOD:01060"},{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"(R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid","termid":"MOD:00419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cyclized N-terminal S-carboxamidomethyl-L-cysteine","synonyms":[{"name":"(R)-5-oxoperhydro-1,4-thiazine-3-carboxylic acid","type":"exact"},{"name":"5-oxothiomorpholine-3-carboxylic acid","type":"exact"},{"name":"Otc","type":"exact"},{"name":"Pyro-carbamidomethyl","type":"related"},{"name":"S-carbamoylmethylcysteine cyclization (N-terminus)","type":"related"}],"termid":"MOD:01871"}


id: PBO:0015692
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-60S shuttling factor Alb1 (predicted)","termid":"PBO:0015692"}


id: PBO:0069873
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1160, pseudogene","termid":"PBO:0069873"}


id: GO:0120324
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphological, biochemical and genetic changes that induce the differentiation of bloodstream form trypomastigotes into procyclic trypomastigotes in some of the Trypanosomatidae species such as Trypanosoma brucei. This process occurs inside the midgut of the tsetse fly vectors in T. brucei.","definition_xrefs":["PMID:10593184","PMID:17997129","PMID:3194362","PMID:1698624","PMID:3194363","GOC:ach"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"procyclogenesis","termid":"GO:0120324"}


id: PBO:0056713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 5","termid":"PBO:0056713"}


id: MONDO:0018589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"AApoAIV amyloidosis","secondary_identifiers":["DOID:0080927","GARD:21828","MEDGEN:1800228","icd11.foundation:1235542353","Orphanet:439232","UMLS:C5568805"],"synonyms":[{"name":"apolipoprotein A-IV amyloidosis","type":"exact"}],"termid":"MONDO:0018589","xrefs":{"Monarch":{"xref_id":"0018589"}}}


id: PBO:0052524
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 38","termid":"PBO:0052524"}


id: FYPO:0006983
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id: PBO:0114533
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id: PBO:0069582
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 856, pseudogene","termid":"PBO:0069582"}


id: PR:O94419
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1620.12c gene.","definition_xrefs":["UniProtKB:O94419","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein C1620.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.12c","synonyms":[{"name":"Spom972h-SPCC1620.12c","type":"exact"}],"termid":"PR:O94419"}


id: MONDO:0020599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of a coagulation factor that is not caused by genetic alterations. Causes include vitamin K deficiency, amyloidosis, and severe liver disease.","definition_xrefs":["NCIT:C34347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired coagulation factor deficiency","secondary_identifiers":["UMLS:C0001169","MEDGEN:98","SCTID:25904003","NANDO:1200896"],"synonyms":[{"name":"acquired coagulation factor deficiency","type":"exact"},{"name":"acquired coagulation protein disease","type":"exact"}],"termid":"MONDO:0020599","xrefs":{"Monarch":{"xref_id":"0020599"}}}


id: PBO:0031679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cell_cycle_arrest_in_response_to_pheromone","termid":"PBO:0031679"}


id: PBO:0083550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized ORF YJL181W","termid":"PBO:0083550"}


id: PBO:0057229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 384","termid":"PBO:0057229"}


id: PBO:0028074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_cut","termid":"PBO:0028074"}


id: FYPO:0008305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic recombination between alleles on different sister chromatids (inter-sister recombination) is increased.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased meiotic recombination","termid":"FYPO:0000487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000293","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased inter-sister chromatid meiotic recombination","termid":"FYPO:0008305"}


id: GO:0008530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an extracellular peptide to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete exogenous peptide receptor activity (obsolete GO:0008530)","synonyms":[{"name":"exogenous peptide receptor activity","type":"exact"}],"termid":"GO:0008530"}


id: GO:0042990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription factor import into nucleus (obsolete GO:0042990)","synonyms":[{"name":"regulation of transcription factor import into cell nucleus","type":"exact"},{"name":"regulation of transcription factor transport from cytoplasm to nucleus","type":"exact"},{"name":"regulation of transcription factor-nucleus import","type":"exact"}],"termid":"GO:0042990"}


id: FYECO:0000288
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a high temperature (roughly above 25 degrees Celsius) followed by growth at standard temperature (in the range around 25-32 degrees Celsius).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature shift, high to standard","synonyms":[{"name":"growth at high temperature followed by growth at standard temperature","type":"related"}],"termid":"FYECO:0000288"}


id: PBO:0042574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A interacting protein N-terminal like pseudogene 3","termid":"PBO:0042574"}


id: GO:0061911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which amphisomes fuse with a vacuole (yeast) or lysosome (e.g. mammals and insects). In the case of yeast, inner membrane-bounded structures (autophagic bodies) appear in the vacuole. Fusion provides an acidic environment and digestive function to the interior of the amphisome.","definition_xrefs":["PMID:24219988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0006810","GO:0006914","GO:0016192"],"is_obsolete":false,"name":"amphisome-lysosome fusion","termid":"GO:0061911"}


id: FYPO:0002356
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of binding by a gene product to a methylated histone residue in a protein is normal (i.e. indistinguishable from wild type). The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"normal methylated histone residue binding","termid":"FYPO:0002356"}


id: PBO:0054315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1707","termid":"PBO:0054315"}


id: GO:0042886
data:
  {"annotated_genes":["SJAG_05182","SJAG_00922","SJAG_05213","SJAG_02139","SJAG_00176","SJAG_01983","SJAG_02029","SJAG_03690","SJAG_03503","SJAG_04413","SJAG_04325","SJAG_02779","SJAG_01660","SJAG_03577","SJAG_03497","SJAG_03452","SJAG_02125","SJAG_00355","SJAG_01116","SJAG_01344","SJAG_02780","SJAG_01437","SJAG_04725","SJAG_02602","SJAG_05175"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[110332,103113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"},{"annotations":[72144,79599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[92401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905136"},{"annotations":[72173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"},{"annotations":[118647,118646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035442"},{"annotations":[73249,109927,117816,73695,73909,74630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035621"},{"annotations":[61892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015884"},{"annotations":[95858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[113440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[96403,97381,118506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[70863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[75986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090374"},{"annotations":[72855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098717"},{"annotations":[107499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090539"},{"annotations":[97382,96404,118507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[108294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901583"},{"annotations":[103326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"},{"annotations":[57941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071918"}]},"cv_name":"biological_process","definition":"The directed movement of an amide, any compound containing one, two, or three acyl groups attached to a nitrogen atom, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00176":null,"SJAG_00355":null,"SJAG_00922":null,"SJAG_01116":null,"SJAG_01344":null,"SJAG_01437":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_02029":null,"SJAG_02125":null,"SJAG_02139":null,"SJAG_02602":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_03452":null,"SJAG_03497":null,"SJAG_03503":null,"SJAG_03577":null,"SJAG_03690":null,"SJAG_04325":null,"SJAG_04413":null,"SJAG_04725":null,"SJAG_05175":null,"SJAG_05182":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"amide transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0042886","terms_by_termid":{"GO:0015884":null,"GO:0035348":null,"GO:0035442":null,"GO:0035621":null,"GO:0036246":null,"GO:0071918":null,"GO:0071996":null,"GO:0090374":null,"GO:0090539":null,"GO:0098709":null,"GO:0098717":null,"GO:0140206":null,"GO:0140207":null,"GO:0160007":null,"GO:1901583":null,"GO:1905135":null,"GO:1905136":null,"GO:1990559":null,"GO:1990591":null}}


id: GO:0031414
data:
  {"annotated_genes":["SJAG_06449","SJAG_02726","SJAG_02920","SJAG_04631","SJAG_04179","SJAG_03045","SJAG_03215","SJAG_01826","SJAG_04131"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70427,77711,76312,71186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031415"},{"annotations":[70916,78247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031416"},{"annotations":[75586,67329,72609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031417"}]},"cv_name":"cellular_component","definition":"A complex that catalyzes the transfer of an acetyl group to the N-terminal residue of a protein acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetyltransferase complex","termid":"GO:0031248"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01826":null,"SJAG_02726":null,"SJAG_02920":null,"SJAG_03045":null,"SJAG_03215":null,"SJAG_04131":null,"SJAG_04179":null,"SJAG_04631":null,"SJAG_06449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"N-terminal protein acetyltransferase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"NAT complex","type":"exact"}],"termid":"GO:0031414","terms_by_termid":{"GO:0031415":null,"GO:0031416":null,"GO:0031417":null}}


id: GO:0002142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of proteins that connect growing stereocilia in developing cochlear hair cells, composed of Vlgr1, usherin, vezatin, and whirlin.","definition_xrefs":["PMID:16775142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"stereocilia ankle link","termid":"GO:0002141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"stereocilia ankle link complex","termid":"GO:0002142"}


id: GO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(beta-D-ribofuranosyl)-1,4-dihydronicotinamide + a quinone = 1-(beta-D-ribofuranosyl)nicotinamide + a hydroquinone.","definition_xrefs":["RHEA:12364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dihydronicotinamide riboside quinone reductase activity","secondary_identifiers":["MetaCyc:1.10.99.2-RXN","Reactome:R-HSA-8936519","EC:1.10.5.1"],"synonyms":[{"name":"N-ribosyldihydronicotinamide dehydrogenase (quinone) activity","type":"related"},{"name":"NQO2","type":"related"},{"name":"NQO2 activity","type":"related"},{"name":"NRH:quinone oxidoreductase 2 activity","type":"narrow"},{"name":"QR2 activity","type":"related"},{"name":"quinone reductase 2 activity","type":"related"},{"name":"ribosyldihydronicotinamide dehydrogenase (quinone) activity","type":"exact"}],"termid":"GO:0001512"}


id: PBO:0063570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase E","termid":"PBO:0063570"}


id: PBO:0070374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 1","termid":"PBO:0070374"}


id: PATO:0001371
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the bearer's consistency of mucus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucoid","synonyms":[{"name":"mucinous","type":"related"},{"name":"mucous","type":"related"}],"termid":"PATO:0001371"}


id: PBO:0048591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain 5 pseudogene","termid":"PBO:0048591"}


id: PBO:0031421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_morphology","termid":"PBO:0031421"}


id: PBO:0077224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane channel like 1","termid":"PBO:0077224"}


id: PBO:0040246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 4A cysteine peptidase pseudogene 1","termid":"PBO:0040246"}


id: GO:1900464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cellular hyperosmotic salinity response by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","GOC:dgf","PMID:16278455"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular hyperosmotic salinity response by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900464)","synonyms":[{"name":"negative regulation of cellular response to hyperosmotic salt stress by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900464"}


id: MONDO:0003551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma that arises from the thymus and is characterized by the presence of glandular and squamous carcinomatous components.","definition_xrefs":["NCIT:C6458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymus squamous cell carcinoma","termid":"MONDO:0003493"},{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"thymic adenosquamous carcinoma","secondary_identifiers":["MEDGEN:272286","DOID:5626","UMLS:C1332171"],"synonyms":[{"name":"Thymus adenosquamous carcinoma","type":"exact"},{"name":"adenosquamous carcinoma of Thymus","type":"exact"},{"name":"adenosquamous carcinoma of the Thymus","type":"exact"},{"name":"thymic adenosquamous carcinoma","type":"exact"},{"name":"thymus adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0003551","xrefs":{"Monarch":{"xref_id":"0003551"}}}


id: PBO:0000715
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target genes transcriptionally co-regulated by Mcs6","termid":"PBO:0000715"}


id: PBO:0040743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 9","termid":"PBO:0040743"}


id: PBO:0027013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_molecular_function","termid":"PBO:0027013"}


id: PBO:0053285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA inflammatory and mucous response associated, antisense to ICAM1","termid":"PBO:0053285"}


id: FYPO:0006801
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype  observed in the vegetative growth phase of the life cycle in which cells contain more spindle pole bodies (SPBs) than normal. In this phenotype, extra SPBs typically contain normal components but seldom attach to spindle microtubules.","definition_xrefs":["PomBase:mah","PMID:9763447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal mitotic spindle pole body duplication","termid":"FYPO:0001791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0000631"],"is_obsolete":false,"name":"spindle pole bodies present in increased numbers during vegetative growth","synonyms":[{"name":"SPBs present in increased numbers during vegetative growth","type":"exact"},{"name":"excess mitotic spindle pole bodies present","type":"exact"},{"name":"excess spindle pole bodies present during vegetative growth","type":"exact"},{"name":"extra spindle pole bodies present during vegetative growth","type":"exact"},{"name":"multiple mitotic spindle pole bodies","type":"exact"},{"name":"overreplicated mitotic spindle pole bodies","type":"related"},{"name":"spindle pole bodies present in greater numbers during vegetative growth","type":"exact"},{"name":"spindle pole bodies present in increased numbers during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006801"}


id: PBO:0062776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily A member 4","termid":"PBO:0062776"}


id: GO:0098616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2SeO4 => diphosphate + adenylylselenate.","definition_xrefs":["PMID:2537056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"selenate adenylyltransferase (ATP) activity","secondary_identifiers":["Reactome:R-HSA-2408525"],"termid":"GO:0098616"}


id: GO:0051366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by formation of an ester or amide with decanoic acid.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"protein decanoylation","synonyms":[{"name":"protein amino acid decanoylation","type":"exact"}],"termid":"GO:0051366"}


id: GO:0017064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a fatty acid amide to yield a fatty acid.","definition_xrefs":["PMID:15952893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"fatty acid amide hydrolase activity","secondary_identifiers":["GO:0017073","EC:3.5.1.99","Reactome:R-HSA-5693742","Reactome:R-HSA-5693751","GO:0102077","GO:0103073"],"synonyms":[{"name":"anandamide amidohydrolase activity","type":"narrow"},{"name":"oleamide hydrolase activity","type":"narrow"}],"termid":"GO:0017064"}


id: PBO:0000461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D, Pld1","termid":"PBO:0000461"}


id: GO:0016338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules","synonyms":[{"name":"calcium-independent cell adhesion molecule activity","type":"related"}],"termid":"GO:0016338"}


id: MONDO:0850126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sex cord-stromal benign neoplasm that arises from the testis.","definition_xrefs":["DOID:0080371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular sex cord-stromal neoplasm","termid":"MONDO:0003125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular sex cord-stromal benign neoplasm","termid":"MONDO:0850126","xrefs":{"Monarch":{"xref_id":"0850126"}}}


id: PBO:0003641
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression autoregulated","termid":"PBO:0003641"}


id: PBO:0062803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 2","termid":"PBO:0062803"}


id: GO:0018271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + biotin + protein = AMP + diphosphate + biotin-protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete biotin-protein ligase activity (obsolete GO:0018271)","secondary_identifiers":["Reactome:R-HSA-9035988","Reactome:R-HSA-9035990","Reactome:R-HSA-2993447","Reactome:R-HSA-2993814","Reactome:R-HSA-2993799","Reactome:R-HSA-2993802","Reactome:R-HSA-3323184","Reactome:R-HSA-9035987","Reactome:R-HSA-4167511"],"synonyms":[{"name":"biotin-apoprotein ligase activity","type":"exact"}],"termid":"GO:0018271"}


id: MONDO:0011053
data:
  {"annotated_genes":["SJAG_05313","SJAG_04755"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86584,86585],"is_not":false,"summary":null,"term":"MONDO:0011053"}]},"cv_name":"mondo","definition":"Intellectual disability-sparse hair-brachydactyly syndrome is a very rare condition of unknown etiology consisting of short stature, hypotrichosis, brachydactyly with cone-shaped epiphyses, epilepsy and severe mental delay. After the initial delineation of this syndrome by Nicolaides and Baraitser in 1993, only five more patients were published in the literature up to now.","definition_xrefs":["Orphanet:3051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"intellectual disability-sparse hair-brachydactyly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:401046009","UMLS:C1303073","DOID:0081441","OMIM:601358","GARD:270","MESH:C536116","MEDGEN:220983"],"synonyms":[{"name":"NBs","type":"related"},{"name":"NCBRS","type":"related"},{"name":"NICOLAIDES-Baraitser syndrome","type":"related"},{"name":"Nicolaides-Baraitser syndrome","type":"exact"},{"name":"SMARCA2-related BAFopathy","type":"exact"},{"name":"intellectual disability-sparse hair-brachydactyly syndrome","type":"exact"},{"name":"sparse hair and intellectual disability","type":"related"},{"name":"sparse hair and mental retardation","type":"related"}],"termid":"MONDO:0011053","terms_by_termid":{"MONDO:0011053":null},"xrefs":{"Monarch":{"xref_id":"0011053"}}}


id: RO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a motor neuron and a muscle that it synapses to via a type Ib bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_to","termid":"RO:0002120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_via_type_Ib_bouton_to","termid":"RO:0002105"}


id: GO:0044520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of the activity of a vasoactive intestinal polypeptide receptor in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in another organism (obsolete GO:0044520)","synonyms":[{"name":"envenomation resulting in positive regulation of VIP receptor activity in other organism","type":"exact"},{"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044520"}


id: FYPO:0007449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abolished, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:32735772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localization to ER, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0007449"}


id: PBO:0062621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily A member 1","termid":"PBO:0062621"}


id: PBO:0072120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 9","termid":"PBO:0072120"}


id: GO:0048232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of the male gamete; specialised haploid cells produced by meiosis and along with a female gamete takes part in sexual reproduction.","definition_xrefs":["GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male gamete generation","termid":"GO:0048232"}


id: GO:0033083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of immature T cell proliferation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"regulates","term_name":"immature T cell proliferation","termid":"GO:0033079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immature T cell proliferation","termid":"GO:0033083"}


id: FYPO:0005068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites of double-strand breaks in DNA is greater than normal during S phase of the mitotic cell cycle.","definition_xrefs":["PMID:18180284","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of double-strand break sites during vegetative growth","termid":"FYPO:0000455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased number of double-strand break sites during mitotic S phase","synonyms":[{"name":"accumulation of DNA damage foci during mitotic S phase","type":"related"},{"name":"accumulation of double-strand break sites during mitotic S phase","type":"exact"},{"name":"increased number of DNA damage foci during mitotic S phase","type":"related"},{"name":"increased number of double-strand break sites during S phase during vegetative growth","type":"exact"},{"name":"increased number of double-strand break sites during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005068"}


id: PBO:0002389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA polymerase Rpo41","termid":"PBO:0002389"}


id: GO:0048054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire the specialized features of R2 and R5 photoreceptors. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R2/R5 cell differentiation","termid":"GO:0048054"}


id: PBO:0027339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutamate-cysteine_ligase_activity","termid":"PBO:0027339"}


id: GO:0098509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to detect some level of humidity in its environment, convert this detection into a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["PMID:8650222","PMID:18269908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of humidity","synonyms":[{"name":"hygrosensory perception","type":"exact"}],"termid":"GO:0098509"}


id: FYPO:0004960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in the mitochondria is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"},{"relation_name":"is_a","term_name":"normal level of substance in mitochondrion","termid":"FYPO:0004959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal mitochondrial RNA level","synonyms":[{"name":"normal mitochondrial RNA accumulation","type":"related"},{"name":"normal mitochondrial RNA level during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial RNA level during vegetative growth","type":"exact"},{"name":"normal mitochondrial transcript level","type":"exact"}],"termid":"FYPO:0004960"}


id: PBO:0074500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAP47 antisense RNA 1","termid":"PBO:0074500"}


id: GO:0010818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a T cell in response to an external stimulus. A T cell is a type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte chemotaxis","termid":"GO:0048247"},{"relation_name":"is_a","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell chemotaxis","synonyms":[{"name":"T-cell chemotaxis","type":"exact"}],"termid":"GO:0010818"}


id: PBO:0062282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 2","termid":"PBO:0062282"}


id: PBO:0089883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Mms2","termid":"PBO:0089883"}


id: MONDO:0000006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alopecia-mental retardation syndrome (obsolete MONDO:0000006)","termid":"MONDO:0000006","xrefs":{"Monarch":{"xref_id":"0000006"}}}


id: GO:0030946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate. This reaction requires metal ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine phosphatase activity","termid":"GO:0004725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0004721","GO:0140096","GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"protein tyrosine phosphatase activity, metal-dependent","termid":"GO:0030946"}


id: GO:1903976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glial cell migration.","definition_xrefs":["GOC:nc","GO_REF:0000058","GOC:TermGenie","PMID:19100238","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"negatively_regulates","term_name":"glial cell migration","termid":"GO:0008347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glial cell migration","synonyms":[{"name":"down regulation of glia cell migration","type":"exact"},{"name":"down regulation of glial cell migration","type":"exact"},{"name":"down-regulation of glia cell migration","type":"exact"},{"name":"down-regulation of glial cell migration","type":"exact"},{"name":"downregulation of glia cell migration","type":"exact"},{"name":"downregulation of glial cell migration","type":"exact"},{"name":"inhibition of glia cell migration","type":"narrow"},{"name":"inhibition of glial cell migration","type":"narrow"},{"name":"negative regulation of glia cell migration","type":"exact"}],"termid":"GO:1903976"}


id: GO:0001321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of general metabolic decline that arises in dividing cells as they age, and alters cellular metabolism to cause a decline in cell function.","definition_xrefs":["GOC:jh","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent general metabolic decline involved in replicative cell aging (obsolete GO:0001321)","synonyms":[{"name":"age-dependent general metabolic decline during replicative cell ageing","type":"related"},{"name":"age-dependent general metabolic decline involved in replicative cell aging","type":"related"}],"termid":"GO:0001321"}


id: GO:2000889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cellodextrin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cellodextrin metabolic process","synonyms":[{"name":"cellodextrin metabolism","type":"exact"}],"termid":"GO:2000889"}


id: PBO:0055282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2709","termid":"PBO:0055282"}


id: GO:2001073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cyclodextrin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"},{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cyclodextrin binding","termid":"GO:2001073"}


id: PBO:0052882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-4","termid":"PBO:0052882"}


id: PR:O14275
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr4 gene.","definition_xrefs":["UniProtKB:O14275","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.06c","synonyms":[{"name":"Spom972h-ppr4","type":"exact"}],"termid":"PR:O14275"}


id: GO:0052827
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990651"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol pentakisphosphate + H2O = myo-inositol tetrakisphosphate + phosphate.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate phosphatase activity","termid":"GO:0052745"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"inositol pentakisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052827","terms_by_termid":{"GO:1990651":null}}


id: PBO:0056037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent transforming growth factor beta binding protein 2","termid":"PBO:0056037"}


id: MONDO:0013590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive Stickler syndrome in which the cause of the disease is a mutation in the COL9A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Stickler syndrome","termid":"MONDO:0019354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328","MONDO:0005497"],"is_obsolete":false,"name":"Stickler syndrome, type 4","secondary_identifiers":["UMLS:C3279941","OMIM:614134","MEDGEN:481571","GARD:18358"],"synonyms":[{"name":"COL9A1 autosomal recessive Stickler syndrome","type":"exact"},{"name":"STICKLER syndrome, type IV","type":"related"},{"name":"STL4","type":"related"},{"name":"autosomal recessive Stickler syndrome caused by mutation in COL9A1","type":"exact"}],"termid":"MONDO:0013590","xrefs":{"Monarch":{"xref_id":"0013590"}}}


id: GO:1990090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nerve growth factor stimulus.","definition_xrefs":["PMID:22399805","Wikipedia:Nerve_growth_factor"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to nerve growth factor","termid":"GO:1990089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nerve growth factor stimulus","synonyms":[{"name":"cellular response to NGF","type":"exact"}],"termid":"GO:1990090"}


id: MONDO:0025066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute generalized dermatitis of pigs which occurs from 5 to 35 days of age, characterized by sudden onset, with morbidity of 10 to 90% and mortality of 5 to 90%. The lesions are caused by Staphylococcus hyos but the bacterial agent is unable to penetrate the intact skin. Abrasions on the feet and legs or lacerations on the body frequently precede infection. In acute cases, a vesicular-type virus may be the predisposing factor. The causative organism is inhibited by most antibiotics. (Merck Veterinary Manual, 5th ed)","definition_xrefs":["MESH:D004818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermitis, exudative, of swine","synonyms":[{"name":"Epidermitis, exudative of swine","type":"related"},{"name":"disease, greasy pig","type":"related"},{"name":"exudative dermatitis of swine","type":"related"},{"name":"greasy pig disease","type":"related"},{"name":"swine exudative Dermatitides","type":"related"},{"name":"swine exudative dermatitis","type":"related"}],"termid":"MONDO:0025066","xrefs":{"Monarch":{"xref_id":"0025066"}}}


id: PBO:0059804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 30","termid":"PBO:0059804"}


id: PATO:0000604
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000604 orientation value (obsolete PATO:0000604)","termid":"PATO:0000604"}


id: PBO:0048345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 56","termid":"PBO:0048345"}


id: GO:0038102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting with an activin receptor complex to reduce the action of another ligand, the agonist. A receptor antagonist does not initiate signaling upon binding to a receptor, but instead blocks an agonist from binding to the receptor.","definition_xrefs":["GOC:signaling","PMID:15062104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor antagonist activity","termid":"GO:0048019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"negatively_regulates","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0038023","GO:0140678","GO:0005515","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"activin receptor antagonist activity","termid":"GO:0038102"}


id: PBO:0035926
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bent_cell","termid":"PBO:0035926"}


id: FYPO:0000937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cortical microtubule cytoskeleton is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell cortex during vegetative growth","termid":"FYPO:0000929"},{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal protein localization to cortical microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to cortical microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"decreased protein localisation to cortical microtubule cytoskeleton during vegetative growth","type":"exact"},{"name":"decreased protein localization to cortical microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to cortical microtubule cytoskeleton during vegetative growth","type":"exact"}],"termid":"FYPO:0000937"}


id: PBO:0001463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine carbamoyltransferase Arg3","termid":"PBO:0001463"}


id: PBO:0087601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; null mutant is sensitive to drug inducing secretion of vacuolar cargo; GFP-fusion protein localizes to the endosome","termid":"PBO:0087601"}


id: MONDO:0006987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aortic stenosis caused by fibromuscular stenosis or hypertrophic cardiomyopathy. It may be associated with congenital heart defects.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic valve stenosis","termid":"MONDO:0042981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"subvalvular aortic stenosis","secondary_identifiers":["NANDO:2200277","MedDRA:10042431","DOID:5805","UMLS:C0340375","EFO:1001199","GARD:5052","NANDO:2100093","NCIT:C85172","MESH:D001020","SCTID:204368006","MEDGEN:90950"],"termid":"MONDO:0006987","xrefs":{"Monarch":{"xref_id":"0006987"}}}


id: MONDO:0002138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A allergic contact dermatitis that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noninfectious dermatoses of eyelid","termid":"MONDO:0002137"},{"relation_name":"is_a","term_name":"eye allergy","termid":"MONDO:0005551"},{"relation_name":"is_a","term_name":"allergic contact dermatitis","termid":"MONDO:0006525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328","MONDO:0005046"],"is_obsolete":false,"name":"allergic contact dermatitis of eyelid","secondary_identifiers":["SCTID:402249007","MEDGEN:509833","DOID:1895","ICD9:373.32","UMLS:C0155178","ICD9:692.9"],"synonyms":[{"name":"contact and allergic dermatitis of eyelid","type":"exact"},{"name":"eyelid allergic contact dermatitis","type":"exact"}],"termid":"MONDO:0002138","xrefs":{"Monarch":{"xref_id":"0002138"}}}


id: PBO:0079820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UL16 binding protein 2","termid":"PBO:0079820"}


id: GO:0009010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-sorbitol 6-phosphate + NAD+ = D-fructose 6-phosphate + NADH + H+.","definition_xrefs":["EC:1.1.1.140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sorbitol-6-phosphate 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:SORB6PDEHYDROG-RXN","RHEA:19837"],"synonyms":[{"name":"D-glucitol-6-phosphate dehydrogenase activity","type":"related"},{"name":"D-sorbitol 6-phosphate dehydrogenase activity","type":"related"},{"name":"D-sorbitol-6-phosphate dehydrogenase activity","type":"related"},{"name":"D-sorbitol-6-phosphate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"glucitol-6-phosphate dehydrogenase activity","type":"related"},{"name":"ketosephosphate reductase activity","type":"related"},{"name":"sorbitol-6-P-dehydrogenase activity","type":"related"}],"termid":"GO:0009010"}


id: MONDO:0004636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the lip.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oral cavity carcinoma in situ","termid":"MONDO:0000371"},{"relation_name":"is_a","term_name":"carcinoma of lip","termid":"MONDO:0021333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"lip carcinoma in situ","secondary_identifiers":["DOID:8661","NCIT:C4588","UMLS:C0347082","ICD9:230.0","MEDGEN:83849","SCTID:92643000"],"synonyms":[{"name":"carcinoma in situ of lip","type":"exact"},{"name":"carcinoma in situ of the Lip","type":"exact"},{"name":"lip in situ carcinoma","type":"exact"},{"name":"stage 0 Lip cancer","type":"exact"},{"name":"stage 0 Lip cancer aJCC v6","type":"exact"},{"name":"stage 0 Lip cancer aJCC v6 and v7","type":"exact"},{"name":"stage 0 Lip cancer aJCC v7","type":"exact"},{"name":"stage 0 cancer of Lip","type":"exact"},{"name":"stage 0 cancer of the Lip","type":"exact"},{"name":"stage 0 carcinoma of Lip","type":"exact"},{"name":"stage 0 carcinoma of the Lip","type":"exact"},{"name":"stage 0 lip carcinoma","type":"exact"}],"termid":"MONDO:0004636","xrefs":{"Monarch":{"xref_id":"0004636"}}}


id: GO:0061108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the seminal vesicle epithelium over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"seminal vesicle development","termid":"GO:0061107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seminal vesicle epithelium development","termid":"GO:0061108"}


id: PBO:0003487
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.13.11.-","termid":"PBO:0003487"}


id: MONDO:0016317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete limbic encephalitis with NMDA receptor antibodies (obsolete MONDO:0016317)","termid":"MONDO:0016317","xrefs":{"Monarch":{"xref_id":"0016317"}}}


id: PBO:0074565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 19","termid":"PBO:0074565"}


id: PBO:0079969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 7","termid":"PBO:0079969"}


id: PBO:0042302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD9 molecule","termid":"PBO:0042302"}


id: PBO:0038423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A2M antisense RNA 1","termid":"PBO:0038423"}


id: GO:0015327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cystine(out) + glutamate(in) = cystine(in) + glutamate(out).","definition_xrefs":["TC:2.A.3.8.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transmembrane transporter activity","termid":"GO:0000099"},{"relation_name":"is_a","term_name":"L-glutamate transmembrane transporter activity","termid":"GO:0005313"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"cystine:glutamate antiporter activity","termid":"GO:0015327"}


id: FYPO:0006372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes or sister chromatids do not separate completely during meiosis I or meiosis II, and partially separated DNA masses are connected by one or more bridges formed of chromatin.","definition_xrefs":["PMID:29123917","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"incomplete meiotic chromosome segregation, with chromosomal bridge","synonyms":[{"name":"abnormal meiotic chromosome segregation, with chromosomal bridge","type":"exact"},{"name":"incomplete chromosome segregation, with chromosomal bridge, during meiosis","type":"exact"},{"name":"incomplete meiotic chromosome segregation, with chromatin bridge","type":"exact"}],"termid":"FYPO:0006372"}


id: PBO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by proline","termid":"PBO:0002215"}


id: PBO:0062380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily D member 2","termid":"PBO:0062380"}


id: PBO:0058732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6859-2","termid":"PBO:0058732"}


id: PBO:0042346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD82 molecule","termid":"PBO:0042346"}


id: PBO:0051254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-22-2 (pseudogene)","termid":"PBO:0051254"}


id: PBO:0090456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER thiol oxidase Erv2","termid":"PBO:0090456"}


id: GO:0048279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the endoplasmic reticulum.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"vesicle fusion with endoplasmic reticulum","synonyms":[{"name":"vesicle fusion with ER","type":"exact"}],"termid":"GO:0048279"}


id: PBO:0071090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 92","termid":"PBO:0071090"}


id: MONDO:0012778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 9","secondary_identifiers":["OMIM:612007","UMLS:C2677605","MEDGEN:393783"],"synonyms":[{"name":"CELIAC9","type":"exact"},{"name":"celiac disease, susceptibility to, 9","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 9","type":"related"}],"termid":"MONDO:0012778","xrefs":{"Monarch":{"xref_id":"0012778"}}}


id: GO:0036156
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Inner arm structure present on the outer doublet microtubules of ciliary and flagellar axonemes. The structure of inner dynein arms is complex and may vary within the axoneme. Inner dynein arms are heteromeric, comprising 8 different heavy chains and various subunits. Inner and outer dynein arms have different functions in the generation of microtubule-based motility.","definition_xrefs":["GOC:vk","PMID:19347929","PMID:2557057","PMID:7962092","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal dynein complex","termid":"GO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0015630","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"inner dynein arm","synonyms":[{"name":"inner dynein arm complex","type":"exact"}],"termid":"GO:0036156"}


id: MONDO:0018739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare acquired neutropenia characterized by isolated neutropenia in a newborn due to maternal alloimmunization against human neutrophil antigens (HNA) inherited from the father and present on fetal neutrophils, and subsequent increased breakdown of the latter. The condition is self-limiting and resolves after several weeks. It usually presents with only mild bacterial infections or may even be asymptomatic, although severe forms with sepsis and fatal outcome have also been reported.","definition_xrefs":["Orphanet:464370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutropenia","termid":"MONDO:0001475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"neonatal alloimmune neutropenia","secondary_identifiers":["GARD:21929","MEDGEN:543869","UMLS:C0272176","ICD10CM:P61.5","SCTID:14333004"],"termid":"MONDO:0018739","xrefs":{"Monarch":{"xref_id":"0018739"}}}


id: PBO:0076766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 5","termid":"PBO:0076766"}


id: PBO:0075426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 16","termid":"PBO:0075426"}


id: GO:0075236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of zoospore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of zoospore movement on or near host (obsolete GO:0075236)","termid":"GO:0075236"}


id: PBO:0055866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein associated protein 1","termid":"PBO:0055866"}


id: GO:0060122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of inner ear receptor cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"part_of","term_name":"inner ear receptor cell development","termid":"GO:0060119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell stereocilium organization","synonyms":[{"name":"inner ear hair cell receptor stereocilium organization","type":"exact"},{"name":"inner ear receptor stereocilium organisation","type":"exact"},{"name":"inner ear receptor stereocilium organization and biogenesis","type":"related"}],"termid":"GO:0060122"}


id: PBO:0055210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2635","termid":"PBO:0055210"}


id: PBO:0049671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 3","termid":"PBO:0049671"}


id: PBO:0005490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMBR1-like membrane protein","termid":"PBO:0005490"}


id: PBO:0000623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCHC type (zinc knuckle)","termid":"PBO:0000623"}


id: PBO:0052893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-4","termid":"PBO:0052893"}


id: PR:O74463
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1739.01 gene.","definition_xrefs":["UniProtKB:O74463","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1739.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.01","synonyms":[{"name":"Spom972h-SPCC1739.01","type":"exact"}],"termid":"PR:O74463"}


id: PBO:0073737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 1 member 4","termid":"PBO:0073737"}


id: PBO:0031745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_flocculation_(obsolete_FYPO:0000463)","termid":"PBO:0031745"}


id: MONDO:0956992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A posterior fossa ependymoma that arises in the posterior fossa with characteristic DNA methylation patterns, including CpG island hypermethylation, global DNA hypomethylation, reduction of nuclear H3 p.K28me3 (K27me3) expression, and EZHIP overexpression.","definition_xrefs":["DOID:0081254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior fossa ependymoma","termid":"MONDO:0850339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"posterior fossa group A ependymoma","secondary_identifiers":["NCIT:C186450"],"termid":"MONDO:0956992","xrefs":{"Monarch":{"xref_id":"0956992"}}}


id: PBO:0031376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_organization","termid":"PBO:0031376"}


id: PBO:0047158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 185 member B, pseudogene","termid":"PBO:0047158"}


id: GO:0044766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore, involving more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism transport (obsolete GO:0044766)","termid":"GO:0044766"}


id: PBO:0080493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor C domain containing 2 like","termid":"PBO:0080493"}


id: PBO:0052614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRBOX5 pseudogene 1","termid":"PBO:0052614"}


id: GO:0008466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + glycogenin = UDP + glucosylglycogenin. This first reaction is a self glucosylation. Further UDP-glucose goups are added to the [1,4-alpha-D-glucosyl](n) group of glycogenin until a length of about 5-13 residues.","definition_xrefs":["EC:2.4.1.186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glycogenin glucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-3814838","Reactome:R-HSA-3322003","Reactome:R-HSA-3322014","Reactome:R-HSA-3322019","Reactome:R-HSA-3322025","GO:0047210"],"synonyms":[{"name":"1,4alpha-glucan-protein synthase (UDP-forming) activity","type":"exact"},{"name":"UDP-alpha-D-glucose:glycogenin alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:glycogenin glucosyltransferase activity","type":"related"},{"name":"alpha-1,4-glucan-protein synthase (UDP-forming) activity","type":"exact"},{"name":"glycogenin activity","type":"related"},{"name":"priming glucosyltransferase activity","type":"related"}],"termid":"GO:0008466"}


id: GO:1904235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of substrate-dependent cell migration, cell attachment to substrate.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25834989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"substrate-dependent cell migration, cell attachment to substrate","termid":"GO:0006931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of substrate-dependent cell migration, cell attachment to substrate","synonyms":[{"name":"regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"}],"termid":"GO:1904235"}


id: MONDO:0019059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare parkinsonian disorder.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare parkinsonian disorder (obsolete MONDO:0019059)","secondary_identifiers":["Orphanet:68402"],"synonyms":[{"name":"rare hypokinetic movement disorder","type":"exact"},{"name":"rare parkinsonian disorder","type":"exact"}],"termid":"MONDO:0019059","xrefs":{"Monarch":{"xref_id":"0019059"}}}


id: PBO:0080923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 1","termid":"PBO:0080923"}


id: PBO:0081377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 215","termid":"PBO:0081377"}


id: GO:0034624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of strand exchange proteins (recombinases) into higher order oligomers on single-stranded DNA, involved in the conversion of the mating-type locus from one allele to another.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA recombinase assembly involved in gene conversion at mating-type locus (obsolete GO:0034624)","termid":"GO:0034624"}


id: GO:0072231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the S1 portion of the metanephric proximal convoluted tubule over time, from its formation to the mature structure. The S1 portion is the initial portion of the metanephric proximal convoluted tubule and is responsible for avid reabsorption of water and solutes.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal convoluted tubule segment 1 development","termid":"GO:0072031"},{"relation_name":"part_of","term_name":"metanephric proximal convoluted tubule development","termid":"GO:0072229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric proximal convoluted tubule segment 1 development","synonyms":[{"name":"metanephric S1 development","type":"exact"}],"termid":"GO:0072231"}


id: GO:0004023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+; can proceed in the absence of a metal ion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete alcohol dehydrogenase (NAD+) activity, metal ion-independent (obsolete GO:0004023)","synonyms":[{"name":"alcohol dehydrogenase activity, metal ion-independent","type":"broad"}],"termid":"GO:0004023"}


id: PBO:0045171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 5","termid":"PBO:0045171"}


id: GO:0005396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane conductance regulator activity (obsolete GO:0005396)","synonyms":[{"name":"transmembrane conductance regulator activity","type":"exact"}],"termid":"GO:0005396"}


id: PBO:0091456
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3125118_3125119insT","termid":"PBO:0091456"}


id: GO:1901176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lycopene.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"lycopene metabolic process","termid":"GO:1901175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lycopene catabolic process","synonyms":[{"name":"lycopene breakdown","type":"exact"},{"name":"lycopene catabolism","type":"exact"},{"name":"lycopene degradation","type":"exact"}],"termid":"GO:1901176"}


id: PBO:0084078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein that couples the Ski complex and exosome; putative pseudo-translational GTPase involved in 3'-to-5' mRNA decay pathway; interacts with both the cytoplasmic exosome and the Ski complex; eRF3-like domain targets nonstop mRNA for degradation; null mutants have a superkiller phenotype; SKI7 has a paralog, HBS1, that arose from the whole genome duplication","termid":"PBO:0084078"}


id: PATO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being locked together or interconnected to another entity.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interlocked with","termid":"PATO:0002437"}


id: PBO:0062430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 91 pseudogene","termid":"PBO:0062430"}


id: PBO:0047077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member F, pseudogene","termid":"PBO:0047077"}


id: PBO:0081676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 597","termid":"PBO:0081676"}


id: GO:0052749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose 6-phosphate + coenzyme F420 + H+ = 6-O-phosphono-D-glucono-1,5-lactone + reduced coenzyme F420.","definition_xrefs":["RHEA:27294","GOC:mengo_curators","EC:1.1.98.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glucose-6-phosphate dehydrogenase (coenzyme F420) activity","secondary_identifiers":["KEGG_REACTION:R09550","MetaCyc:RXN-11283"],"synonyms":[{"name":"D-glucose-6-phosphate:F420 1-oxidoreductase activity","type":"exact"},{"name":"F420-dependent glucose-6-phosphate dehydrogenase activity","type":"related"},{"name":"coenzyme F420-dependent glucose-6-phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0052749"}


id: GO:0047396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-(alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol = 1,2-diacyl-sn-glycerol + 6-(alpha-D-glucosaminyl)-1D-myo-inositol 1,2-cyclic phosphate.","definition_xrefs":["EC:4.6.1.14","MetaCyc:3.1.4.47-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"glycosylphosphatidylinositol diacylglycerol-lyase activity","secondary_identifiers":["RHEA:14333"],"synonyms":[{"name":"(glycosyl)phosphatidylinositol-specific phospholipase C activity","type":"related"},{"name":"6-(alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol diacyl-sn-glycerol-lyase [6-(alpha-D-glucosaminyl)-1D-myo-inositol 1,2-cyclic phosphate-forming]","type":"related"},{"name":"6-(alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol diacylglycerol-lyase (1,2-cyclic-phosphate-forming) activity","type":"related"},{"name":"GPI-PLC activity","type":"related"},{"name":"GPI-specific phospholipase C activity","type":"related"},{"name":"VSG-lipase activity","type":"related"},{"name":"glycosyl inositol phospholipid anchor-hydrolyzing enzyme activity","type":"related"},{"name":"glycosylphosphatidylinositol-phospholipase C activity","type":"narrow"},{"name":"glycosylphosphatidylinositol-specific phospholipase C activity","type":"related"},{"name":"variant-surface-glycoprotein phospholipase C activity","type":"exact"}],"termid":"GO:0047396"}


id: SO:1000084
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence variant decreases the stability (half-life) of the transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000084 sequence_variant_decreasing_transcript_stability (obsolete SO:1000084)","synonyms":[{"name":"mutation decreasing transcript stability","type":"related"},{"name":"sequence variant decreasing transcript stability","type":"exact"}],"termid":"SO:1000084"}


id: PBO:0060342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VIIB","termid":"PBO:0060342"}


id: GO:0044741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism inhibits or disrupts sensory perception of pain in another organism via the action of a venom.","definition_xrefs":["GOC:jl","PMID:23034652","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of nervous system process","termid":"GO:0140136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated suppression of sensory perception of pain","synonyms":[{"name":"envenomation resulting in inhibition of sensory perception of pain in other organism","type":"exact"},{"name":"envenomation resulting in negative regulation of sensory perception of pain in another organism","type":"exact"},{"name":"envenomation resulting in negative regulation of sensory perception of pain in other organism","type":"exact"}],"termid":"GO:0044741"}


id: PR:Q9Y7X5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-glucose 4-epimerase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose 4-epimerase uge1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.14c","secondary_identifiers":["UniProtKB:Q9Y7X5"],"synonyms":[{"name":"Galactowaldenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GALE","type":"exact"}],"termid":"PR:Q9Y7X5"}


id: MONDO:0957278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte/zygote/embryo maturation arrest 20","secondary_identifiers":["UMLS:C5830539","MEDGEN:1841175","OMIM:620383"],"termid":"MONDO:0957278","xrefs":{"Monarch":{"xref_id":"0957278"}}}


id: PBO:0075177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 7","termid":"PBO:0075177"}


id: PBO:0064910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 1 like (pseudogene)","termid":"PBO:0064910"}


id: MONDO:0004288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infiltrating ductal breast carcinoma associated with stromal fibrosis.","definition_xrefs":["NCIT:C7362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive ductal breast carcinoma","termid":"MONDO:0004953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"scirrhous breast carcinoma","secondary_identifiers":["ICDO:8514/3","DOID:7578","UMLS:C0346151","MEDGEN:87541","SCTID:254839007"],"synonyms":[{"name":"breast scirrhous carcinoma","type":"related"},{"name":"infiltrating carcinoma of breast with fibrotic Stroma","type":"exact"},{"name":"infiltrating carcinoma of the breast with fibrotic Stroma","type":"exact"},{"name":"scirrhous breast carcinoma","type":"exact"},{"name":"scirrhous carcinoma of breast","type":"exact"},{"name":"scirrhous carcinoma of the breast","type":"exact"}],"termid":"MONDO:0004288","xrefs":{"Monarch":{"xref_id":"0004288"}}}


id: MONDO:0016535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic disorder of ectoderm development characterized by malformation of ectodermal structures such as skin, hair, teeth and sweat glands. It comprises three clinically almost indistinguishable subtypes with impaired sweating as the key symptom: Christ-Siemens-Touraine (CST) syndrome (X-linked), autosomal recessive (AR), and autosomal dominant (AD) HED, as well as a fourth rare subtype with immunodeficiency as the key symptom (HED with immunodeficiency).","definition_xrefs":["Orphanet:238468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hypohidrotic ectodermal dysplasia","secondary_identifiers":["GARD:76","SCTID:7731005","icd11.foundation:673167184","HP:0007607","NANDO:2201005","NCIT:C84562","NORD:1272","DOID:14793","MEDGEN:1853123","UMLS:C5848103"],"synonyms":[{"name":"CST syndrome","type":"related"},{"name":"EDA","type":"related"},{"name":"HED","type":"exact"},{"name":"anhidrotic ectodermal dysplasia","type":"exact"},{"name":"anhidrotic ectodermal dysplasia 1","type":"exact"},{"name":"anhidrotic ectodermal dysplasia 3","type":"exact"},{"name":"ectodermal dysplasia 1, Anhydrotic","type":"exact"},{"name":"ectodermal dysplasia anhidrotic","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic","type":"related"},{"name":"hypohidrotic X-linked ectodermal dysplasia","type":"exact"}],"termid":"MONDO:0016535","xrefs":{"Monarch":{"xref_id":"0016535"}}}


id: PBO:0018095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA/Iml1/Npr2/3 complex subunit Npr3 (predicted)","termid":"PBO:0018095"}


id: GO:0098897
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the spine apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"spine apparatus","termid":"GO:0097444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spine apparatus membrane","termid":"GO:0098897"}


id: GO:0106189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to the hydrolysis of a diphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked to the hydrolysis of a diphosphate (obsolete GO:0106189)","termid":"GO:0106189"}


id: GO:0075249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of aeciospore formation, a process in which a dikaryotic spore of typically a rust fungus is produced in an aecium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043945"},{"relation_name":"is_a","term_name":"regulation of aeciospore formation","termid":"GO:0075248"},{"relation_name":"positively_regulates","term_name":"aeciospore formation","termid":"GO:0075247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aeciospore formation","termid":"GO:0075249"}


id: GO:0070481
data:
  {"annotated_genes":["SJAG_04321","SJAG_04283","SJAG_04818","SJAG_00226","SJAG_04006","SJAG_01521","SJAG_00854","SJAG_01818","SJAG_04153","SJAG_03179","SJAG_04824","SJAG_01218","SJAG_04118","SJAG_04084","SJAG_03805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62700,93423,96251,97576,101556,102402,104720,105585,106786,107772,109138,116190,116452,117529,118606],"is_not":false,"summary":null,"term":"GO:0070481"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that is lacking a stop codon.","definition_xrefs":["PMID:11910110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00854":null,"SJAG_01218":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03805":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04283":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, non-stop decay","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"non-stop decay","type":"exact"},{"name":"non-stop mRNA decay","type":"exact"},{"name":"nonstop mRNA decay","type":"exact"},{"name":"nuclear-transcribed mRNA breakdown, non-stop decay","type":"exact"},{"name":"nuclear-transcribed mRNA catabolism, non-stop decay","type":"exact"},{"name":"nuclear-transcribed mRNA degradation, non-stop decay","type":"exact"}],"termid":"GO:0070481","terms_by_termid":{"GO:0070481":null}}


