# terms

id: GO:0030228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a lipoprotein particle and delivering the lipoprotein particle into the cell via endocytosis. A lipoprotein particle, also known as a lipoprotein, is a clathrate complex consisting of a lipid enwrapped in a protein host without covalent binding in such a way that the complex has a hydrophilic outer surface consisting of all the protein and the polar ends of any phospholipids.","definition_xrefs":["PMID:12827279","GOC:bf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"lipoprotein particle receptor activity","synonyms":[{"name":"lipoprotein receptor activity","type":"exact"},{"name":"plasma lipoprotein particle receptor activity","type":"narrow"}],"termid":"GO:0030228"}


id: PBO:0116416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane P-type proton exporting ATPase, P3-type Pma2","termid":"PBO:0116416"}


id: SO:0001049
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An island that contains genes for integration/excision and the gene and site for the initiation of intercellular transfer by conjugation. It can be complemented for transfer by a conjugative transposon.","definition_xrefs":["Phigo:ariane"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective_conjugative_transposon","synonyms":[{"name":"defective conjugative transposon","type":"exact"}],"termid":"SO:0001049"}


id: MONDO:1012132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin G deficiency, non-human animal","termid":"MONDO:1011727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin G deficiency, dog","secondary_identifiers":["OMIA:000554-9615"],"termid":"MONDO:1012132","xrefs":{"Monarch":{"xref_id":"1012132"}}}


id: PBO:0068184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 491","termid":"PBO:0068184"}


id: GO:0102670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4',7-trihydroxyisoflavanone + S-adenosyl-L-methionine = H+ + 2,7-dihydroxy-4'-methoxyisoflavanone + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.212","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"2,7,4'-trihydroxyisoflavanone-4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-3624","RHEA:31371"],"termid":"GO:0102670"}


id: GO:1990103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex containing DNA-bound DnaA attached to HU. HU is a dimer encoded by two closely related genes. Essential for the initiation of replication in bacteria; stimulates the DnaA-dependent unwinding of oriC.","definition_xrefs":["GOC:bhm","PMID:18179598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"DnaA-HU complex","synonyms":[{"name":"DnaA-HU-DNA complex","type":"exact"}],"termid":"GO:1990103"}


id: PBO:0027150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_serine_level","termid":"PBO:0027150"}


id: PBO:0043776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A2","termid":"PBO:0043776"}


id: PBO:0064417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylethanolamine N-methyltransferase","termid":"PBO:0064417"}


id: PBO:0045044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 4","termid":"PBO:0045044"}


id: PBO:0069651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 928, pseudogene","termid":"PBO:0069651"}


id: MONDO:0014499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the NDST1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 46","secondary_identifiers":["DOID:0081210","GARD:22568","MEDGEN:863720","OMIM:616116","UMLS:C4015283"],"synonyms":[{"name":"MRT46","type":"related"},{"name":"NDST1 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in NDST1","type":"exact"},{"name":"intellectual disability, autosomal recessive 46","type":"exact"},{"name":"intellectual disability, autosomal recessive type 46","type":"exact"},{"name":"mental retardation, autosomal recessive 46","type":"related"},{"name":"mental retardation, autosomal recessive type 46","type":"exact"}],"termid":"MONDO:0014499","xrefs":{"Monarch":{"xref_id":"0014499"}}}


id: MONDO:1040021
data:
  {"annotated_genes":["SJAG_04728"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012157"}]},"cv_name":"mondo","definition":"Any postsynaptic congenital myasthenic syndrome in which the cause of the disease is a mutation in the CHRNE gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:1040021","terms_by_termid":{"MONDO:0012157":null},"xrefs":{"Monarch":{"xref_id":"1040021"}}}


id: PBO:0002071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming]","termid":"PBO:0002071"}


id: PBO:0074932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 99","termid":"PBO:0074932"}


id: GO:0052763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of a carbon-oxygen bond in ulvan, a carbohydrate composed of a repeating structure of [->4)-beta-D-GlcA-(1,4)-alpha-L-Rha 3S-(1->4)-alpha-L-IdoA-(1->4)-alpha-L-Rha 3S-(1-]n. Continued digest of ulvan with an enzyme that can catalyze this reaction results in ulvanobiouronic acid A 3-sulfate [->4)-beta-D-GlcpA-(1->4)-alpha-L-Rhap 3-sulfate-(1-]n with 4-deoxy-L-threo-hex-4-enopyranosiduronic acid at the non-reducing end.","definition_xrefs":["GOC:mengo_curators","PMID:9468631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"ulvan lyase activity","termid":"GO:0052763"}


id: GO:0038103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting with an activin receptor to reduce the action of the agonist nodal. A receptor antagonist does not initiate signaling upon binding to a receptor, but instead blocks an agonist from binding to the receptor.","definition_xrefs":["GOC:signaling","PMID:15062104"],"gene_count":0,"genotype_count":0,"name":"obsolete activin receptor antagonist activity involved in negative regulation of nodal signaling pathway (obsolete GO:0038103)","synonyms":[{"name":"activin receptor antagonist activity involved in negative regulation of nodal signalling pathway","type":"exact"},{"name":"nodal antagonist activity","type":"exact"}],"termid":"GO:0038103"}


id: PBO:0111888
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT hook protein","termid":"PBO:0111888"}


id: PBO:0082919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c heme lyase (holocytochrome c synthase); attaches heme to apo-cytochrome c (Cyc1p or Cyc7p) in mitochondrial intermembrane space; human homolog HCCS implicated in microphthalmia with linear skin defects (MLS), and can complement yeast null mutant","termid":"PBO:0082919"}


id: PBO:0034628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome-dependent_ATPase_activity","termid":"PBO:0034628"}


id: PBO:0116689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 17B","termid":"PBO:0116689"}


id: FYPO:0004698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of heme binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased heme binding","synonyms":[{"name":"decreased haem binding","type":"exact"},{"name":"reduced heme binding","type":"exact"}],"termid":"FYPO:0004698"}


id: FYPO:0002974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which origin recognition complex (ORC) assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal origin recognition complex assembly","synonyms":[{"name":"normal ORC assembly","type":"exact"},{"name":"normal origin recognition complex assembly during mitotic cell cycle","type":"related"},{"name":"normal origin recognition complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0002974"}


id: PBO:0026721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_oligomerization","termid":"PBO:0026721"}


id: MONDO:0011341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, facial abnormalities, micromelia, and intellectual disability","secondary_identifiers":["MESH:C566361","MEDGEN:350957","OMIM:603572","UMLS:C1863702"],"synonyms":[{"name":"microcephaly, facial abnormalities, micromelia, and intellectual disability","type":"exact"},{"name":"microcephaly, facial abnormalities, micromelia, and mental retardation","type":"exact"}],"termid":"MONDO:0011341","xrefs":{"Monarch":{"xref_id":"0011341"}}}


id: PBO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome inhibitor (predicted)","termid":"PBO:0002206"}


id: FYPO:0002555
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[119853,119857,119845,119846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex of a cell is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex","termid":"FYPO:0001371"},{"relation_name":"is_a","term_name":"abolished protein localization to cell division site","termid":"FYPO:0001880"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":2,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abolished protein localization to medial cortex during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"abolished protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to medial ring during vegetative growth","type":"exact"},{"name":"protein localization to medial cortex abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0002555","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0007177":null}}


id: PBO:0044563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia 4","termid":"PBO:0044563"}


id: PBO:0051273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 4","termid":"PBO:0051273"}


id: GO:0047194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-O-(indol-3-ylacetyl)-beta-D-glucose + myo-inositol = 1L-1-O-(indol-3-yl)acetyl-myo-inositol + D-glucose.","definition_xrefs":["EC:2.3.1.72","RHEA:21180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"indoleacetylglucose-inositol O-acyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04333","MetaCyc:2.3.1.72-RXN"],"synonyms":[{"name":"1-O-(indol-3-yl)acetyl-beta-D-glucose:myo-inositol (indol-3-yl)acetyltransferase activity","type":"related"},{"name":"1-O-(indol-3-ylacetyl)-beta-D-glucose:myo-inositol indole-3-ylacetyltransferase activity","type":"related"},{"name":"indole-3-acetyl-beta-1-D-glucoside:myo-inositol indoleacetyltransferase activity","type":"related"}],"termid":"GO:0047194"}


id: GO:1902434
data:
  {"annotated_genes":["SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110428],"is_not":false,"summary":null,"term":"GO:1902434"}]},"cv_name":"biological_process","definition":"The directed movement of sulfate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","PMID:14723223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion import across plasma membrane","termid":"GO:0098658"},{"relation_name":"is_a","term_name":"sulfate transmembrane transport","termid":"GO:1902358"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"sulfate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sulfate import into cell","type":"exact"},{"name":"sulphate import into cell","type":"exact"}],"termid":"GO:1902434","terms_by_termid":{"GO:1902434":null}}


id: GO:1900603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tensidol A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"tensidol A metabolic process","synonyms":[{"name":"tensidol A metabolism","type":"exact"}],"termid":"GO:1900603"}


id: PBO:0071710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 8","termid":"PBO:0071710"}


id: GO:0075220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of zoospore encystment on host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore encystment on host","termid":"GO:0075216"},{"relation_name":"is_a","term_name":"modulation of zoospore encystment on host","termid":"GO:0075219"},{"relation_name":"positively_regulates","term_name":"zoospore encystment on host","termid":"GO:0075218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of zoospore encystment on host","termid":"GO:0075220"}


id: PBO:0044227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin pseudogene 1","termid":"PBO:0044227"}


id: GO:1901956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde dense core granule transport.","definition_xrefs":["GOC:TermGenie","PMID:23358451","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle transport along microtubule","termid":"GO:1901610"},{"relation_name":"is_a","term_name":"regulation of retrograde dense core granule transport","termid":"GO:1901954"},{"relation_name":"is_a","term_name":"positive regulation of dense core granule transport","termid":"GO:1904811"},{"relation_name":"is_a","term_name":"positive regulation of retrograde axon cargo transport","termid":"GO:2001019"},{"relation_name":"positively_regulates","term_name":"retrograde neuronal dense core vesicle transport","termid":"GO:1990049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of retrograde dense core granule transport","synonyms":[{"name":"activation of retrograde dense core granule transport","type":"narrow"},{"name":"up regulation of retrograde dense core granule transport","type":"exact"},{"name":"up-regulation of retrograde dense core granule transport","type":"exact"},{"name":"upregulation of retrograde dense core granule transport","type":"exact"}],"termid":"GO:1901956"}


id: MONDO:0007499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear folding","secondary_identifiers":["OMIM:128500","MEDGEN:377546","UMLS:C1851901"],"synonyms":[{"name":"ear folding","type":"exact"}],"termid":"MONDO:0007499","xrefs":{"Monarch":{"xref_id":"0007499"}}}


id: MONDO:0011087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 12p13.2-q24.1.","definition_xrefs":["DOID:0110900","PMID:8841195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 2","secondary_identifiers":["OMIM:601458","MESH:C563310","MEDGEN:321934","UMLS:C1832321"],"synonyms":[{"name":"IBD2","type":"exact"},{"name":"inflammatory bowel disease 2","type":"exact"},{"name":"inflammatory bowel disease type 2","type":"exact"}],"termid":"MONDO:0011087","xrefs":{"Monarch":{"xref_id":"0011087"}}}


id: PBO:0062466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 157 pseudogene","termid":"PBO:0062466"}


id: MONDO:0020330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete classic Hodgkin lymphoma, lymphocyte-depleted type (obsolete MONDO:0020330)","termid":"MONDO:0020330","xrefs":{"Monarch":{"xref_id":"0020330"}}}


id: GO:0140969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the lungs with respect to the left and right halves of the organism.","definition_xrefs":["GOC:rl","PMID:20007846","GOC:BHFL","PMID:19944405","PMID:21131974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of lung left/right asymmetry","termid":"GO:0140969"}


id: PBO:0048381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor 5A","termid":"PBO:0048381"}


id: FYPO:0005341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is decreased during a cellular response to hydroxyurea. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased chromatin binding during cellular response to hydroxyurea","synonyms":[{"name":"decreased chromatin binding during cellular response to HU","type":"exact"},{"name":"reduced chromatin binding during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005341"}


id: PBO:0057165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320c-1","termid":"PBO:0057165"}


id: FYPO:0009020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which the poportion of cells with two nuclei is lower than normal.","definition_xrefs":["PMID:34984977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"decreased vegetative cell population binucleate index","synonyms":[{"name":"less cells with two nuclei during vegetative growth","type":"exact"},{"name":"lower proportion of binucleate cells during vegetative growth","type":"exact"}],"termid":"FYPO:0009020"}


id: PBO:0049547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 10","termid":"PBO:0049547"}


id: PBO:0030039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_fatty_acid_synthase_activity","termid":"PBO:0030039"}


id: PBO:0061552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NT5C3A pseudogene 2","termid":"PBO:0061552"}


id: PBO:0082193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldose reductase; involved in methylglyoxal, d-xylose, arabinose, and galactose metabolism; stress induced (osmotic, ionic, oxidative, heat shock, starvation and heavy metals); regulated by HOG pathway; overexpression allows xylose fermentation in strains expressing heterologous xylitol dehydrogenase and xylulokinase; protein abundance increases in response to DNA replication stress","termid":"PBO:0082193"}


id: PBO:0027547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_non-fermentable_carbon_source","termid":"PBO:0027547"}


id: PBO:0044658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 1","termid":"PBO:0044658"}


id: MOD:00020
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-leucine.","definition_xrefs":["DeltaMass:0","PubMed:6692818","RESID:AA0011","ChEBI:30006","PubMed:11478885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-leucine residue","synonyms":[{"name":"(2S)-2-amino-4-methylpentanoic acid","type":"exact"},{"name":"2-azanyl-4-methylpentanoic acid","type":"exact"},{"name":"4-methyl-norvaline","type":"exact"},{"name":"L-leucine","type":"exact"},{"name":"Leu","type":"exact"},{"name":"alpha-amino-gamma-methylvaleric acid","type":"exact"},{"name":"alpha-aminoisocaproic acid","type":"exact"}],"termid":"MOD:00020"}


id: PBO:0027822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_single-stranded_DNA_binding","termid":"PBO:0027822"}


id: GO:0044340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contributes to modulating the rate or frequency of cell proliferation.","definition_xrefs":["GOC:jl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in regulation of cell proliferation (obsolete GO:0044340)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in regulation of cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in regulation of cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in regulation of cell proliferation","type":"exact"}],"termid":"GO:0044340"}


id: MONDO:0005993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sexually transmitted parasitic infection caused by Trichomonas vaginalis. Symptoms include vaginal discharge, vaginal odor, vaginal itching, and discomfort during intercourse.","definition_xrefs":["NCIT:C35083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichomoniasis","termid":"MONDO:0002154"},{"relation_name":"is_a","term_name":"sexually transmitted disease","termid":"MONDO:0021681"},{"relation_name":"is_a","term_name":"urinary tract infection","termid":"MONDO:0100338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trichomonas vaginitis urogenital infection","secondary_identifiers":["ICD10CM:A59.0","ICD9:131.00","ICD9:131.09","MESH:D014247","SCTID:35089004","DOID:0050269"],"synonyms":[{"name":"Trichomonas vaginalis caused disease of genitourinary system","type":"exact"},{"name":"Trichomonas vaginalis disease of genitourinary system","type":"exact"},{"name":"Trichomonas vaginalis trichomoniasis","type":"related"},{"name":"Trichomonas vaginitis","type":"exact"},{"name":"urogenital Trichomonas","type":"exact"},{"name":"urogenital infection by Trichomonas vaginalis","type":"exact"},{"name":"urogenital infection caused by Trichomonas vaginalis","type":"related"},{"name":"urogenital trichomoniasis","type":"related"}],"termid":"MONDO:0005993","xrefs":{"Monarch":{"xref_id":"0005993"}}}


id: GO:0039012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephric sinus over time, from its formation to the mature structure. The pronephric sinus is an ill-defined capillary network that lies between the pronephric tubules.","definition_xrefs":["XAO:0000385","PMID:10535314","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric sinus development","termid":"GO:0039012"}


id: PBO:0066707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 4","termid":"PBO:0066707"}


id: PBO:0067628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 800, pseudogene","termid":"PBO:0067628"}


id: PBO:0056737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl aminopeptidase 1","termid":"PBO:0056737"}


id: PBO:0000240
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.6","termid":"PBO:0000240"}


id: PBO:0062396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 18 pseudogene","termid":"PBO:0062396"}


id: PBO:0026963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_vegetative_cell_during_phosphate_starvation","termid":"PBO:0026963"}


id: MONDO:1011875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive ataxia with head tremor and seizures, non-human animal","secondary_identifiers":["OMIA:001363"],"termid":"MONDO:1011875","xrefs":{"Monarch":{"xref_id":"1011875"}}}


id: MONDO:0008410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by osteochondrosis of the vertebral epiphyses in childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"},{"relation_name":"is_a","term_name":"osteonecrosis of genetic origin","termid":"MONDO:0018383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scheuermann disease","secondary_identifiers":["Orphanet:3135","MEDGEN:19885","MESH:D012544","NCIT:C34999","ICD9:732.0","SCTID:53406005","UMLS:C0036310","DOID:13300","OMIM:181440"],"synonyms":[{"name":"Calve's disease","type":"exact"},{"name":"Scheuermann disease","type":"exact"},{"name":"Scheuermann juvenile kyphosis","type":"related"},{"name":"Scheuermann kyphosis","type":"related"},{"name":"Scheuermann's disease","type":"exact"},{"name":"Scheuermann's kyphosis","type":"exact"},{"name":"Sherman's disease","type":"exact"},{"name":"familial Scheuermann disease","type":"related"},{"name":"familial Scheuermann juvenile kyphosis","type":"exact"},{"name":"familial spinal osteochondrosis","type":"exact"},{"name":"juvenile kyphosis","type":"related"},{"name":"juvenile osteochondritis of the spine","type":"exact"},{"name":"juvenile osteochondrosis of Scheurermann","type":"exact"},{"name":"juvenile osteochondrosis of spine","type":"exact"},{"name":"spinal Osteochondrosis","type":"related"}],"termid":"MONDO:0008410","xrefs":{"Monarch":{"xref_id":"0008410"}}}


id: PBO:0061913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily C member 1","termid":"PBO:0061913"}


id: PBO:0003532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex subunit Php2","termid":"PBO:0003532"}


id: GO:0034430
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The single layer of phopholipids surrounding a lipid storage body.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle-enclosing lipid monolayer","termid":"GO:0034646"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"monolayer-surrounded lipid storage body","termid":"GO:0012511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"monolayer-surrounded lipid storage body outer lipid monolayer","synonyms":[{"name":"lipid droplet outer lipid monolayer","type":"related"},{"name":"lipid storage body surface lipid monolayer","type":"exact"},{"name":"oil body outer lipid monolayer","type":"exact"},{"name":"oleosome outer lipid monolayer","type":"exact"},{"name":"spherosome outer lipid monolayer","type":"exact"}],"termid":"GO:0034430"}


id: GO:0018145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a peptidyl-serine residue by the formation of O-(phospho-5'-DNA)-L-serine.","definition_xrefs":["RESID:AA0246"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking via peptidyl-serine (obsolete GO:0018145)","synonyms":[{"name":"DNA-protein covalent cross-linking via peptidyl-serine","type":"exact"}],"termid":"GO:0018145"}


id: PBO:0042586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar degeneration related protein 2","termid":"PBO:0042586"}


id: PBO:0001043
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pop-Interacting Protein","termid":"PBO:0001043"}


id: PATO:0000596
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased volume","synonyms":[{"name":"low volume","type":"exact"},{"name":"small volume","type":"related"}],"termid":"PATO:0000596"}


id: MONDO:1012560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysplastic gangliocytoma of the cerebellum, non-human animal","termid":"MONDO:1011826"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysplastic gangliocytoma of the cerebellum, domestic cat","secondary_identifiers":["OMIA:002529-9685"],"termid":"MONDO:1012560","xrefs":{"Monarch":{"xref_id":"1012560"}}}


id: MONDO:0019096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare pulmonary hypertension.","gene_count":0,"genotype_count":0,"name":"obsolete rare pulmonary hypertension (obsolete MONDO:0019096)","secondary_identifiers":["Orphanet:71198"],"synonyms":[{"name":"rare pulmonary hypertension","type":"exact"}],"termid":"MONDO:0019096","xrefs":{"Monarch":{"xref_id":"0019096"}}}


id: GO:0042311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in the internal diameter of blood vessels, especially arterioles or capillaries, due to relaxation of smooth muscle cells that line the vessels, and usually resulting in a decrease in blood pressure.","definition_xrefs":["GOC:pr","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel diameter maintenance","termid":"GO:0097746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasodilation","secondary_identifiers":["Wikipedia:Vasodilation","GO:0045909"],"synonyms":[{"name":"positive regulation of blood vessel size","type":"exact"},{"name":"vasodilatation","type":"exact"}],"termid":"GO:0042311"}


id: GO:0047670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anhydrotetracycline + H+ + NADPH + O2 = 12-dehydrotetracycline + H2O + NADP+.","definition_xrefs":["RHEA:11976","EC:1.14.13.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"anhydrotetracycline monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R04060","MetaCyc:ANHYDROTETRACYCLINE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"ATC oxygenase activity","type":"related"},{"name":"anhydrotetracycline oxygenase activity","type":"related"},{"name":"anhydrotetracycline,NADPH:oxygen oxidoreductase (6-hydroxylating)","type":"related"}],"termid":"GO:0047670"}


id: PBO:0079874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3A pseudogene 1","termid":"PBO:0079874"}


id: GO:1902004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amyloid-beta formation.","definition_xrefs":["PMID:17098871","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"regulation of amyloid-beta formation","termid":"GO:1902003"},{"relation_name":"is_a","term_name":"positive regulation of amyloid precursor protein catabolic process","termid":"GO:1902993"},{"relation_name":"positively_regulates","term_name":"amyloid-beta formation","termid":"GO:0034205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amyloid-beta formation","synonyms":[{"name":"activation of beta-amyloid formation","type":"narrow"},{"name":"positive regulation of beta-amyloid formation","type":"exact"},{"name":"up regulation of beta-amyloid formation","type":"exact"},{"name":"up-regulation of beta-amyloid formation","type":"exact"},{"name":"upregulation of beta-amyloid formation","type":"exact"}],"termid":"GO:1902004"}


id: GO:0072190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the urothelium of the ureter over time, from its formation to the mature structure. The urothelium is an epithelium that makes up the epithelial tube of the ureter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"ureter development","termid":"GO:0072189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter urothelium development","synonyms":[{"name":"ureter epithelium development","type":"exact"}],"termid":"GO:0072190"}


id: SO:0000725
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The transit_peptide is a short region at the N-terminus of the peptide that directs the protein to an organelle (chloroplast, mitochondrion, microbody or cyanelle).","direct_ancestors":[{"relation_name":"derives_from","term_name":"transit_peptide_region_of_CDS","termid":"SO:0002252"},{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"transit_peptide","secondary_identifiers":["BS:00055"],"synonyms":[{"name":"INSDC_feature:transit_peptide","type":"exact"},{"name":"signal","type":"related"},{"name":"transit","type":"related"},{"name":"transit peptide","type":"exact"}],"termid":"SO:0000725"}


id: PBO:0049182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gremlin 2, DAN family BMP antagonist","termid":"PBO:0049182"}


id: GO:0045095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament","termid":"GO:0005882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"keratin filament","synonyms":[{"name":"acidic keratin","type":"related"},{"name":"basic/neutral keratin","type":"related"}],"termid":"GO:0045095"}


id: PBO:0050161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 17","termid":"PBO:0050161"}


id: PBO:0029234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_lysis_during_cellular_response_to_non-ionic_osmotic_stress","termid":"PBO:0029234"}


id: MONDO:0100494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of TTN-related myopathy.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"TTN-related myopathy","termid":"MONDO:0100175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"autosomal dominant titinopathy","synonyms":[{"name":"TTN-related myopathy, autosomal dominant","type":"exact"}],"termid":"MONDO:0100494","xrefs":{"Monarch":{"xref_id":"0100494"}}}


id: PATO:0001500
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being gradually narrower or thinner toward one end.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharp","termid":"PATO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tapered","synonyms":[{"name":"taper","type":"exact"}],"termid":"PATO:0001500"}


id: MONDO:0002410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pyelitis","termid":"MONDO:0006938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pyeloureteritis cystica","secondary_identifiers":["UMLS:C0156254","DOID:2743","ICD9:590.3","MEDGEN:510216","ICD10CM:N28.85","SCTID:37779008"],"termid":"MONDO:0002410","xrefs":{"Monarch":{"xref_id":"0002410"}}}


id: MONDO:0016915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 17","termid":"MONDO:0016879"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 17","secondary_identifiers":["Orphanet:262137","MEDGEN:1826046","UMLS:C5679727","GARD:20836","icd11.foundation:186065235"],"synonyms":[{"name":"partial deletion of chromosome 17q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 17","type":"exact"},{"name":"partial monosomy of chromosome 17q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 17","type":"exact"}],"termid":"MONDO:0016915","xrefs":{"Monarch":{"xref_id":"0016915"}}}


id: GO:0061515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a myeloid cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"part_of","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid cell development","termid":"GO:0061515"}


id: PBO:0070656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 27","termid":"PBO:0070656"}


id: PBO:0085667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nucleotide excision repair; green fluorescent protein (GFP)-fusion protein localizes to the nucleus","termid":"PBO:0085667"}


id: MONDO:0004205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"malignant pleural mesothelioma","termid":"MONDO:0005112"},{"relation_name":"is_a","term_name":"sarcomatoid mesothelioma","termid":"MONDO:0006407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lymphohistiocytoid mesothelioma","secondary_identifiers":["DOID:7381","UMLS:C1334464","MEDGEN:235269","NCIT:C27779"],"termid":"MONDO:0004205","xrefs":{"Monarch":{"xref_id":"0004205"}}}


id: FYPO:0002196
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119398,119410,119471],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001122"},{"annotations":[119847],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0007701"},{"annotations":[119813,119802,119807,119839],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0002380"},{"annotations":[119776,119775,119782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001877"},{"annotations":[119780,119781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cell shape is altered in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell morphology","termid":"FYPO:0001118"},{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00266":null,"SJAG_00514":null,"SJAG_01794":null,"SJAG_02592":null,"SJAG_02819":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04280":null,"SJAG_04312":null,"SJAG_04332":null,"SJAG_04522":null},"genotype_count":13,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D 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type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G 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cell","type":"related"}],"termid":"FYPO:0002196","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0001122":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0001114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A macromolecular complex containing protein, DNA, and RNA molecules.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein-DNA-RNA complex","termid":"GO:0001114"}


id: MONDO:1011185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any vitamin D dependent rickets that occurs in pigs due to a mutation in the CYP27B1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"rickets, pig","termid":"MONDO:1011595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudo vitamin D-deficiency rickets, CYP27B1-related, pig","secondary_identifiers":["OMIA:000837-9823"],"synonyms":[{"name":"vitamin D-deficiency rickets type IA, pig","type":"related"}],"termid":"MONDO:1011185","xrefs":{"Monarch":{"xref_id":"1011185"}}}


id: MONDO:1010493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, cattle","secondary_identifiers":["OMIA:001041-9913"],"termid":"MONDO:1010493","xrefs":{"Monarch":{"xref_id":"1010493"}}}


id: PBO:0071372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 31","termid":"PBO:0071372"}


id: PBO:0080440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VRK serine/threonine kinase 1","termid":"PBO:0080440"}


id: GO:0044069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont organism modulates the anion transport, the directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, of its host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host anion transport (obsolete GO:0044069)","synonyms":[{"name":"modification of host anion transport by symbiont","type":"exact"}],"termid":"GO:0044069"}


id: PBO:0075882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL6 antisense RNA 1","termid":"PBO:0075882"}


id: PBO:0060432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA family member 3, pseudogene","termid":"PBO:0060432"}


id: MONDO:0000542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete duodenum adenoma (obsolete MONDO:0000542)","termid":"MONDO:0000542","xrefs":{"Monarch":{"xref_id":"0000542"}}}


id: GO:0052752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced coenzyme F420 + CoB-S-S-CoM = coenzyme F420 + CoM-SH + CoB-SH.","definition_xrefs":["GOC:mengo_curators","PMID:9914308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"reduced coenzyme F420:heterodisulfide oxidoreductase activity","synonyms":[{"name":"F420-dependent heterodisulfide oxidoreductase activity","type":"exact"},{"name":"F420H2:heterodisulfide oxidoreductase activity","type":"exact"},{"name":"coenzyme F420-dependent heterodisulfide oxidoreductase activity","type":"exact"}],"termid":"GO:0052752"}


id: GO:0046317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosylceramide.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ceramide biosynthetic process","termid":"GO:2000303"},{"relation_name":"regulates","term_name":"glucosylceramide biosynthetic process","termid":"GO:0006679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0006629"],"is_obsolete":false,"name":"regulation of glucosylceramide biosynthetic process","synonyms":[{"name":"regulation of glucosylceramide anabolism","type":"exact"},{"name":"regulation of glucosylceramide biosynthesis","type":"exact"},{"name":"regulation of glucosylceramide formation","type":"exact"},{"name":"regulation of glucosylceramide synthesis","type":"exact"}],"termid":"GO:0046317"}


id: GO:0052233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis in other organism involved in symbiotic interaction (obsolete GO:0052233)","synonyms":[{"name":"positive aerotaxis in other organism during symbiotic interaction","type":"related"},{"name":"positive aerotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052233"}


id: PBO:0090768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial complex III assembly protein Cbp6","termid":"PBO:0090768"}


id: PBO:0005769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L17 (predicted)","termid":"PBO:0005769"}


id: MONDO:0043985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation that includes the brain, spinal cord and surrounding tissues secondary to systemic lupus erythematosus (SLE); it is associated with neurological and/or psychiatric features.","definition_xrefs":["NCIT:C116919"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system vasculitis","termid":"MONDO:0003346"},{"relation_name":"excluded_subClassOf","term_name":"meningoencephalitis","termid":"MONDO:0005845"},{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"central nervous system lupus","secondary_identifiers":["UMLS:C0752332","MESH:D020945","MEDGEN:156265"],"synonyms":[{"name":"CNS lupus","type":"exact"},{"name":"Meningoencephalitides, lupus","type":"related"},{"name":"central nervous system lupus","type":"exact"},{"name":"central nervous system lupus vasculitis","type":"related"},{"name":"central nervous system systemic lupus Erythematosis","type":"related"},{"name":"lupus Meningoencephalitides","type":"related"},{"name":"lupus meningoencephalitis","type":"related"},{"name":"meningoencephalitis, lupus","type":"related"},{"name":"neuropsychiatric systemic lupus erythematosus","type":"related"},{"name":"systemic lupus Erythematosis, central nervous system","type":"related"}],"termid":"MONDO:0043985","xrefs":{"Monarch":{"xref_id":"0043985"}}}


id: PBO:0067478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 610, pseudogene","termid":"PBO:0067478"}


id: GO:0030029
data:
  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id: MONDO:0010612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by infantile hypotonia followed by onset of ataxia, cataract and intellectual deficit by preschool age. Cerebral atrophy was also reported.","definition_xrefs":["Orphanet:1397"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephaly-cerebellar agenesis syndrome","secondary_identifiers":["MEDGEN:375335","MESH:C564407","OMIM:307010","GARD:1200","UMLS:C1844005"],"synonyms":[{"name":"X-linked hydrocephalus-cerebellar agenesis-intellectual disability syndrome","type":"exact"},{"name":"cerebellum agenesis hydrocephaly","type":"related"},{"name":"hydrocephalus with cerebellar agenesis","type":"related"}],"termid":"MONDO:0010612","xrefs":{"Monarch":{"xref_id":"0010612"}}}


id: MONDO:0014645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"BENTA disease (B cell Expansion with N F-N:B and T cell Anergy) is a very rare congenital immune deficiency disorder. The main symptoms include spleen enlargement (splenomegalia) and frequent ear, sinus, and lung infections early in life. Some patients can present with molluscum contagiosum or chronic Epstein-Barr virus (EBV) infection. Blood exams show alterations of several immune cells with very high numbers of polyclonal B cell lymphocytos (above 2200/N<l) and few memory B cells. Other findings are low levels of IgM in blood and poor antibody responses to specific vaccines. BENTA disease is caused by mutations in the CARD11 gene. There is no established treatment, but some patients have their spleen removed and there is one case of a hematopoietic stem cell transplantation with good results.","definition_xrefs":["GARD:0013339"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"BENTA disease","secondary_identifiers":["UMLS:C4551967","MEDGEN:1641265","GARD:13339","Orphanet:464336","OMIM:616452"],"synonyms":[{"name":"B-cell expansion with NF-kB and T-cell anergy disease","type":"exact"},{"name":"B-cell expansion with NFKB and T-cell anergy","type":"related"},{"name":"BENTA","type":"related"}],"termid":"MONDO:0014645","xrefs":{"Monarch":{"xref_id":"0014645"}}}


id: PBO:0031364
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_L-azetidine-2-carboxylic_acid","termid":"PBO:0031364"}


id: PBO:0081440
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF295 antisense RNA 1","termid":"PBO:0081440"}


id: PBO:0091632
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA, pdc102-antisense","termid":"PBO:0091632"}


id: MONDO:0015779
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"45,X/46,XY mixed gonadal dysgenesis (45,X/46,XY MGD) is a disorder of sex development (DSD) associated with a numerical sex chromosome abnormality resulting from Y-chromosome mosaicism and leading to abnormal gonadal development.","definition_xrefs":["Orphanet:1772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"sex chromosome disorder of sex development","termid":"MONDO:0017975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"45,X/46,XY mixed gonadal dysgenesis","secondary_identifiers":["NANDO:2200388","NCIT:C120199","DOID:0080656","GARD:18747"],"synonyms":[{"name":"45,X/46,XY MGD","type":"exact"},{"name":"45,X/46,XY disorder of Sex development","type":"exact"},{"name":"45,X/46,XY gonadal dysgenesis","type":"exact"},{"name":"45,X0/46,XY MGD","type":"exact"},{"name":"45,X0/46,XY mixed gonadal dysgenesis","type":"exact"},{"name":"Mixed gonadal dysgenesis","type":"exact"},{"name":"XY/X0","type":"exact"}],"termid":"MONDO:0015779","xrefs":{"Monarch":{"xref_id":"0015779"}}}


id: PBO:0045509
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSTN pseudogene 1","termid":"PBO:0045509"}


id: MONDO:0016295
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id: PBO:0088538
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, ornithine Ort1","termid":"PBO:0088538"}


id: MONDO:0044226
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete defective interfering particle induction, control of (obsolete MONDO:0044226)","secondary_identifiers":["HGNC:12678"],"synonyms":[{"name":"Dipi, control of","type":"related"},{"name":"defective interfering particle induction, control OF","type":"related"},{"name":"homologous viral interference","type":"related"},{"name":"vesicular stomatitis Virus defective interfering particle repressor","type":"related"}],"termid":"MONDO:0044226","xrefs":{"Monarch":{"xref_id":"0044226"}}}


id: PR:Q09724
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp11 gene.","definition_xrefs":["UniProtKB:Q09724","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L11, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.03","synonyms":[{"name":"Spom972h-mrp11","type":"exact"}],"termid":"PR:Q09724"}


id: PBO:0071662
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 3","termid":"PBO:0071662"}


id: GO:1902980
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any synthesis of RNA primer involved in meiotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete synthesis of RNA primer involved in premeiotic DNA replication (obsolete GO:1902980)","synonyms":[{"name":"synthesis of RNA primer involved in meiotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902980"}


id: MONDO:0003702
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign neoplasm characterized by the presence of smooth muscle cells growing within the veins of the uterine corpus. The intravascular neoplasm growth occurs outside the confines of an adjacent leiomyoma.","definition_xrefs":["NCIT:C5356"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uterine corpus diffuse leiomyomatosis","termid":"MONDO:0003704"},{"relation_name":"is_a","term_name":"uterine benign neoplasm","termid":"MONDO:0000632"},{"relation_name":"is_a","term_name":"intravenous leiomyomatosis","termid":"MONDO:0003614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterus intravascular leiomyomatosis","secondary_identifiers":["DOID:5915"],"synonyms":[{"name":"intravascular leiomyomatosis of the uterus","type":"exact"},{"name":"intravascular leiomyomatosis of uterus","type":"exact"},{"name":"intravenous leiomyomatosis of the uterus","type":"exact"},{"name":"intravenous leiomyomatosis of uterus","type":"exact"},{"name":"uterine corpus intravenous leiomyomatosis","type":"exact"},{"name":"uterus intravenous leiomyomatosis","type":"exact"}],"termid":"MONDO:0003702","xrefs":{"Monarch":{"xref_id":"0003702"}}}


id: GO:0140724
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of patulin.","definition_xrefs":["PMID:25625822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of polyketide biosynthetic process","termid":"GO:1900734"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"patulin biosynthetic process","termid":"GO:0140723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of patulin biosynthetic process","synonyms":[{"name":"positive regulation of patulin anabolism","type":"exact"},{"name":"positive regulation of patulin formation","type":"exact"},{"name":"positive regulation of patulin synthesis","type":"exact"}],"termid":"GO:0140724"}


id: GO:0065007
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id: GO:0042078
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id: GO:0009083
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id: PBO:0061419
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id: PBO:0030707
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id: GO:0033634
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id: PBO:0060862
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id: PBO:0089245
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id: MONDO:0004425
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id: GO:0004930
data:
  {"annotated_genes":["SJAG_01345","SJAG_01978","SJAG_01699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990576"},{"annotations":[75754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004932"},{"annotations":[88486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036320"}]},"cv_name":"molecular_function","definition":"Combining with an extracellular signal and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","Wikipedia:GPCR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01345":null,"SJAG_01699":null,"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled receptor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016526","Reactome:R-HSA-114558","Reactome:R-HSA-114552","GO:0001622","GO:0001624","GO:0001625","Reactome:R-HSA-381706","Reactome:R-HSA-167408","GO:0001623"],"synonyms":[{"name":"EBV-induced receptor","type":"narrow"},{"name":"Epstein-Barr Virus-induced receptor activity","type":"narrow"},{"name":"G protein coupled receptor activity","type":"exact"},{"name":"G protein linked receptor activity","type":"exact"},{"name":"G-protein coupled receptor activity","type":"exact"},{"name":"G-protein coupled receptor activity, unknown ligand","type":"narrow"},{"name":"G-protein linked receptor activity","type":"exact"},{"name":"GPCR activity","type":"exact"},{"name":"Mas proto-oncogene receptor activity","type":"narrow"},{"name":"RDC1 receptor activity","type":"narrow"},{"name":"SREB receptor","type":"narrow"},{"name":"ligand-dependent GPCR activity","type":"exact"},{"name":"orphan G protein coupled receptor activity","type":"narrow"},{"name":"orphan G-protein coupled receptor activity","type":"narrow"},{"name":"orphan GPCR activity","type":"narrow"},{"name":"receptor activity, G-protein coupled","type":"exact"},{"name":"super conserved receptor expressed in brain receptor activity","type":"narrow"}],"termid":"GO:0004930","terms_by_termid":{"GO:0004932":null,"GO:0036320":null,"GO:1990576":null}}


id: MONDO:0015351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of sensorineural hearing impairment and peripheral neuropathy.","definition_xrefs":["Orphanet:139512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuropathy with hearing impairment","secondary_identifiers":["SCTID:723497003","icd11.foundation:129297527","MEDGEN:1375726","GARD:19919","UMLS:C4509933"],"termid":"MONDO:0015351","xrefs":{"Monarch":{"xref_id":"0015351"}}}


id: MONDO:0017011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uniparental disomy of chromosome X (obsolete MONDO:0017011)","secondary_identifiers":["Orphanet:263793"],"synonyms":[{"name":"UPD(X)","type":"exact"},{"name":"uniparental disomy of chromosome type X","type":"exact"}],"termid":"MONDO:0017011","xrefs":{"Monarch":{"xref_id":"0017011"}}}


id: PBO:0067435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 556, pseudogene","termid":"PBO:0067435"}


id: PBO:0053518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 508","termid":"PBO:0053518"}


id: PBO:0049802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocretin receptor 1","termid":"PBO:0049802"}


id: MONDO:0013440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2P (LGMD2P) is a form of limb-girdle muscular dystrophy characterized by slowly-progressive mainly proximal muscle weakness presenting in early childhood (with difficulties walking and climbing stairs) and mild to severe intellectual disability. Additional manifestations reported include microcephaly, mild increase in thigh or calf muscles, and contractures of the ankles.","definition_xrefs":["Orphanet:280333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type C","termid":"MONDO:0000173"},{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0024322","MONDO:0005336","MONDO:0002320","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2P","secondary_identifiers":["OMIM:613818","UMLS:C4511963","DOID:0110293","MEDGEN:1386785","GARD:12541"],"synonyms":[{"name":"DAG1 autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"LGMD2P","type":"exact"},{"name":"MDDGC9","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in DAG1","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2P","type":"related"},{"name":"muscular dystrophy, limb-girdle, type 2P","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle) type C9","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 9","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy limb-girdle DAG1-related","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy, limb-girdle, Dag1-related","type":"related"}],"termid":"MONDO:0013440","xrefs":{"Monarch":{"xref_id":"0013440"}}}


id: MONDO:0024744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the choroid plexus in the brain and occurs during childhood.","definition_xrefs":["NCIT:C42080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choroid plexus neoplasm","termid":"MONDO:0016717"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood choroid plexus neoplasm","secondary_identifiers":["UMLS:C0280623","MEDGEN:76132"],"synonyms":[{"name":"childhood choroid plexus neoplasm","type":"exact"},{"name":"choroid plexus neoplasm","type":"broad"},{"name":"choroid plexus neoplasm of childhood","type":"exact"},{"name":"paediatric choroid plexus neoplasm","type":"exact"},{"name":"pediatric choroid plexus neoplasm","type":"exact"}],"termid":"MONDO:0024744","xrefs":{"Monarch":{"xref_id":"0024744"}}}


id: PR:Q9US55
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A neutral alpha-glucosidase AB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22762:SF7","PRO:DNx","OMA:SCHPO00737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase 2 subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.03c","secondary_identifiers":["UniProtKB:Q9US55"],"synonyms":[{"name":"Spom972h-GANAB","type":"exact"},{"name":"alpha-glucosidase II subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glucosidase II gls2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glucosidase II subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US55"}


id: GO:0000279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"M phase","secondary_identifiers":["Wikipedia:M_phase"],"synonyms":[{"name":"M-phase","type":"exact"}],"termid":"GO:0000279"}


id: PBO:0046644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 25","termid":"PBO:0046644"}


id: GO:0039626
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The intermediate layer of a triple concentric icosahedral capsid. Intermediate capsids are part of reoviridae virions.","definition_xrefs":["UniProtKB-KW:KW-1154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral intermediate capsid","synonyms":[{"name":"intermediate capsid","type":"exact"}],"termid":"GO:0039626"}


id: GO:0070934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An mRNA stabilization process in which one or more RNA-binding proteins associate with a sequence in the open reading frame called the coding region instability determinant (CRD).","definition_xrefs":["PMID:19029303","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA stabilization","termid":"GO:0048255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"CRD-mediated mRNA stabilization","synonyms":[{"name":"coding region determinant-mediated mRNA stabilization","type":"exact"}],"termid":"GO:0070934"}


id: PBO:0042175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 5","termid":"PBO:0042175"}


id: MONDO:1012135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin M deficiency, non-human animal","termid":"MONDO:1011729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin M deficiency, horse","secondary_identifiers":["OMIA:000556-9796"],"termid":"MONDO:1012135","xrefs":{"Monarch":{"xref_id":"1012135"}}}


id: FYPO:0008185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in the centromere central core occurs to a lower extent than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at centromere central core during vegetative growth","termid":"FYPO:0008185"}


id: MONDO:0018395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete male infertility due to sperm motility disorder (obsolete MONDO:0018395)","secondary_identifiers":["Orphanet:399813"],"synonyms":[{"name":"Male infertility due to asthenozoospermia","type":"exact"}],"termid":"MONDO:0018395","xrefs":{"Monarch":{"xref_id":"0018395"}}}


id: GO:1900915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of octadecene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"regulation of octadecene biosynthetic process","termid":"GO:1900914"},{"relation_name":"is_a","term_name":"negative regulation of octadecene metabolic process","termid":"GO:1900918"},{"relation_name":"negatively_regulates","term_name":"octadecene biosynthetic process","termid":"GO:1900682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of octadecene biosynthetic process","synonyms":[{"name":"down regulation of 1-octadecene biosynthetic process","type":"related"},{"name":"down regulation of octadecene anabolism","type":"related"},{"name":"down regulation of octadecene biosynthesis","type":"related"},{"name":"down regulation of octadecene biosynthetic process","type":"exact"},{"name":"down regulation of octadecene formation","type":"related"},{"name":"down regulation of octadecene synthesis","type":"related"},{"name":"down-regulation of 1-octadecene biosynthetic process","type":"related"},{"name":"down-regulation of octadecene anabolism","type":"related"},{"name":"down-regulation of octadecene biosynthesis","type":"related"},{"name":"down-regulation of octadecene biosynthetic process","type":"exact"},{"name":"down-regulation of octadecene formation","type":"related"},{"name":"down-regulation of octadecene synthesis","type":"related"},{"name":"downregulation of 1-octadecene biosynthetic process","type":"related"},{"name":"downregulation of octadecene anabolism","type":"related"},{"name":"downregulation of octadecene biosynthesis","type":"related"},{"name":"downregulation of octadecene biosynthetic process","type":"exact"},{"name":"downregulation of octadecene formation","type":"related"},{"name":"downregulation of octadecene synthesis","type":"related"},{"name":"inhibition of 1-octadecene biosynthetic process","type":"narrow"},{"name":"inhibition of octadecene anabolism","type":"narrow"},{"name":"inhibition of octadecene biosynthesis","type":"narrow"},{"name":"inhibition of octadecene biosynthetic process","type":"narrow"},{"name":"inhibition of octadecene formation","type":"narrow"},{"name":"inhibition of octadecene synthesis","type":"narrow"},{"name":"negative regulation of 1-octadecene biosynthetic process","type":"related"},{"name":"negative regulation of octadecene anabolism","type":"related"},{"name":"negative regulation of octadecene biosynthesis","type":"related"},{"name":"negative regulation of octadecene formation","type":"related"},{"name":"negative regulation of octadecene synthesis","type":"related"}],"termid":"GO:1900915"}


id: PBO:0003141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate N-acetyltransferase (predicted)","termid":"PBO:0003141"}


id: GO:0099579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled neurotransmitter receptor activity, occurring in the postsynaptic membrane, involved in regulation of postsynaptic membrane potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled neurotransmitter receptor activity","termid":"GO:0099528"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099529"},{"relation_name":"is_a","term_name":"G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","type":"exact"}],"termid":"GO:0099579"}


id: PBO:0004282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, transcriptional and translational regulator (predicted)","termid":"PBO:0004282"}


id: PBO:0069430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 695, pseudogene","termid":"PBO:0069430"}


id: PBO:0044439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 8","termid":"PBO:0044439"}


id: PBO:0040529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-2-microglobulin regulator","termid":"PBO:0040529"}


id: MONDO:0017837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple sclerosis-ichthyosis-factor VIII deficiency syndrome is characterized by the association of multiple sclerosis with lamellar ichthyosis and hematological anomalies (beta thalassemia minor and a quantitative deficit of factor VIII-von Willebrand complex). Other clinical manifestations may include eye involvement (optic atrophy, diplopia), neuromuscular involvement (ataxia, pyramidal syndrome, gait disturbance) and sensory disorder. There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:3151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"multiple sclerosis-ichthyosis-factor VIII deficiency syndrome","secondary_identifiers":["GARD:18787","UMLS:C4518551","MEDGEN:1391655"],"termid":"MONDO:0017837","xrefs":{"Monarch":{"xref_id":"0017837"}}}


id: GO:0015550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of galacturonate from one side of a membrane to the other. Galacturonate is the uronic acid formally derived from galactose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"galacturonate transmembrane transporter activity","termid":"GO:0015550"}


id: GO:0086076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from an atrial cardiomyocyte to an AV node cell. The gap junction passes electrical signals between the cells contributing to cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gap junction channel activity involved in cardiac conduction electrical coupling","termid":"GO:0086075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"gap junction channel activity involved in atrial cardiac muscle cell-AV node cell electrical coupling","synonyms":[{"name":"gap junction channel activity involved in atrial cardiomyocyte-AV node cell electrical coupling","type":"related"},{"name":"gap junction channel activity involved in atrial cardiomyocyte-atrioventricular node cell electrical coupling","type":"exact"}],"termid":"GO:0086076"}


id: MONDO:0800330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile myoclonic epilepsy","termid":"MONDO:0009696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"myoclonic epilepsy, juvenile, 2","secondary_identifiers":["MEDGEN:854640","UMLS:C3887932"],"synonyms":[{"name":"EJM2","type":"exact"}],"termid":"MONDO:0800330","xrefs":{"Monarch":{"xref_id":"0800330"}}}


id: PBO:0117175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLSPN divergent transcript","termid":"PBO:0117175"}


id: PBO:0064977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 33","termid":"PBO:0064977"}


id: GO:1903185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-dopa.","definition_xrefs":["PMID:8822146","GO_REF:0000068","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid family biosynthetic process","termid":"GO:0009073"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"L-dopa metabolic process","termid":"GO:1903184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-dopa biosynthetic process","synonyms":[{"name":"L-dopa anabolism","type":"exact"},{"name":"L-dopa biosynthesis","type":"exact"},{"name":"L-dopa formation","type":"exact"},{"name":"L-dopa synthesis","type":"exact"}],"termid":"GO:1903185"}


id: PBO:0041862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 8","termid":"PBO:0041862"}


id: MONDO:0030926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 51","secondary_identifiers":["OMIM:619177","MEDGEN:1780365","DOID:0112273","UMLS:C5543033"],"synonyms":[{"name":"SPGF51","type":"exact"},{"name":"spermatogenic failure 51","type":"exact"}],"termid":"MONDO:0030926","xrefs":{"Monarch":{"xref_id":"0030926"}}}


id: PBO:0069555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 827, pseudogene","termid":"PBO:0069555"}


id: PBO:0012599
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAD16","termid":"PBO:0012599"}


id: MONDO:0012353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial polycythemia in which the cause of the disease is a mutation in the EGLN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial polycythemia","termid":"MONDO:0001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"erythrocytosis, familial, 3","secondary_identifiers":["GARD:18355","MESH:C565221","DOID:0080338","MEDGEN:377868","OMIM:609820","UMLS:C1853286"],"synonyms":[{"name":"ECYT3","type":"related"},{"name":"EGLN1 familial polycythemia","type":"exact"},{"name":"erythrocytosis, familial, 3","type":"exact"},{"name":"erythrocytosis, familial, type 3","type":"exact"},{"name":"familial polycythemia caused by mutation in EGLN1","type":"exact"}],"termid":"MONDO:0012353","xrefs":{"Monarch":{"xref_id":"0012353"}}}


id: PBO:0068434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 4","termid":"PBO:0068434"}


id: GO:0061199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which force is generated within striated embryonic muscle tissue, resulting in a contraction of the muscle that contributes to the formation of an embryo's characteristic body morphology.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle contraction","termid":"GO:0006941"},{"relation_name":"part_of","term_name":"embryonic body morphogenesis","termid":"GO:0010172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle contraction involved in embryonic body morphogenesis","termid":"GO:0061199"}


id: GO:0003900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA-directed RNA polymerase I activity (obsolete GO:0003900)","synonyms":[{"name":"DNA-directed RNA polymerase I activity","type":"exact"}],"termid":"GO:0003900"}


id: MONDO:0011140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign familial neonatal-infantile seizures (obsolete MONDO:0011140)","termid":"MONDO:0011140","xrefs":{"Monarch":{"xref_id":"0011140"}}}


id: PBO:0025493
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monomeric)","termid":"PBO:0025493"}


id: PBO:0031775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_G1_to_G0_transition","termid":"PBO:0031775"}


id: PBO:0072715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin family peptide receptor 2","termid":"PBO:0072715"}


id: MONDO:0007992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcornea-glaucoma-absent frontal sinuses syndrome is characterized by microcornea, glaucoma and absent frontal sinuses. Less 10 cases have been described so far. The mode of transmission appears to be autosomal dominant.","definition_xrefs":["Orphanet:2536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microcornea-glaucoma-absent frontal sinuses syndrome","secondary_identifiers":["UMLS:C1834935","OMIM:156700","MEDGEN:331860","MESH:C537552","GARD:3637"],"synonyms":[{"name":"hereditary microcornea, glaucoma, and absent frontal sinuses","type":"related"},{"name":"microcornea, glaucoma, and absent frontal sinuses","type":"related"}],"termid":"MONDO:0007992","xrefs":{"Monarch":{"xref_id":"0007992"}}}


id: GO:0018585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: fluorene + 2 H+ + 2 e- + O2 = H2O + 9-fluorenol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete fluorene oxygenase activity (obsolete GO:0018585)","termid":"GO:0018585"}


id: PBO:0054085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1436","termid":"PBO:0054085"}


id: GO:0044425
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane part (obsolete GO:0044425)","termid":"GO:0044425"}


id: GO:0180020
data:
  {"annotated_genes":["SJAG_05289","SJAG_03010","SJAG_04644","SJAG_01848","SJAG_02177","SJAG_03795","SJAG_01460"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103775,108877,108954,115188,116494,118802,118890],"is_not":false,"summary":null,"term":"GO:0180020"}]},"cv_name":"molecular_function","definition":"The activity of bending or deforming a membrane. This activity can occur by multiple mechanisms including the insertion amphipathic domains into one or both leaflets.","definition_xrefs":["PMID:19780639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01460":null,"SJAG_01848":null,"SJAG_02177":null,"SJAG_03010":null,"SJAG_03795":null,"SJAG_04644":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"membrane bending activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane curving","type":"related"}],"termid":"GO:0180020","terms_by_termid":{"GO:0180020":null}}


id: GO:0102376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: lupeol + 3 NADPH + 3 O2 + 3 H+ = betulinic acid + 3 NADP + 4 H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete lupeol 28-oxidase activity (obsolete GO:0102376)","termid":"GO:0102376"}


id: GO:0046661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the sex of a male organism by physical differentiation.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex differentiation","termid":"GO:0007548"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male sex differentiation","termid":"GO:0046661"}


id: FYPO:0002111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable tapered cell","termid":"FYPO:0002109"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"inviable tapered vegetative cell","synonyms":[{"name":"inviable bottle-shaped vegetative cell","type":"exact"},{"name":"inviable bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable bottle/skittle vegetative cell","type":"exact"},{"name":"inviable skittle-shaped vegetative cell","type":"exact"},{"name":"inviable tapered cell during vegetative growth","type":"exact"},{"name":"lethal; tapered vegetative cell","type":"exact"}],"termid":"FYPO:0002111"}


id: PBO:0058112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4327","termid":"PBO:0058112"}


id: MONDO:0005040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant, gonadal or extragonadal neoplasm that originates from germ cells. Representative examples include teratoma, seminoma, embryonal carcinoma, and yolk sac tumor.","definition_xrefs":["NCIT:C3708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell tumor","secondary_identifiers":["DOID:2994","EFO:0000514","MEDGEN:60030","UMLS:C0205851"],"synonyms":[{"name":"germ cell cancer","type":"related"},{"name":"germ cell neoplasm","type":"exact"},{"name":"germ cell tumor","type":"exact"},{"name":"germ cells tumors","type":"related"},{"name":"germ cells tumours","type":"related"},{"name":"malignant tumour of the germ cell","type":"related"},{"name":"neoplasm of germ cell","type":"exact"},{"name":"neoplasm of the germ cell","type":"exact"},{"name":"tumor of germ cell","type":"exact"},{"name":"tumor of the germ cell","type":"exact"},{"name":"tumour of germ cell","type":"exact"},{"name":"tumour of the germ cell","type":"exact"}],"termid":"MONDO:0005040","xrefs":{"Monarch":{"xref_id":"0005040"}}}


id: MONDO:0600016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lethal, developmental lung malformation resulting in neonatal respiratory insufficiency. It is characterized by pulmonary hypoplasia and arrest in the pseudoglandular stage of development, resulting in the absence of functional gas exchange. It can be caused by mutations in FGF10, FGFR2 or TBX4.","definition_xrefs":["PMID:31641660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acinar dysplasia","secondary_identifiers":["icd11.foundation:1890124170","MEDGEN:835348","UMLS:C3872820"],"synonyms":[{"name":"AcDys","type":"exact"}],"termid":"MONDO:0600016","xrefs":{"Monarch":{"xref_id":"0600016"}}}


id: PR:Q10304
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22H10.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.11c","synonyms":[{"name":"Spom972h-SPAC22H10.11c","type":"exact"}],"termid":"PR:Q10304"}


id: GO:0045042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The conservative import of proteins into the mitochondrial intermembrane space. The entire protein enters the matrix, and then the second targeting sequence directs the protein, presumably bound to a matrix protein, across the inner membrane to the intermembrane space.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into mitochondrial intermembrane space, conservative (obsolete GO:0045042)","synonyms":[{"name":"conservative mitochondrial IMS protein import","type":"exact"},{"name":"conservative mitochondrial intermembrane space protein import","type":"exact"},{"name":"conservative protein transport into mitochondrial IMS","type":"exact"},{"name":"conservative protein transport into mitochondrial intermembrane space","type":"exact"},{"name":"protein import into mitochondrial IMS, conservative","type":"exact"},{"name":"protein import into mitochondrial intermembrane space, conservative","type":"exact"},{"name":"protein transport into mitochondrial IMS, conservative","type":"exact"},{"name":"protein transport into mitochondrial intermembrane space, conservative","type":"exact"}],"termid":"GO:0045042"}


id: PBO:0111868
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZZ type","termid":"PBO:0111868"}


id: PBO:0018139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mis6-Sim4 complex subunit Fta4","termid":"PBO:0018139"}


id: PBO:0082100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8-oxo-dGTP diphosphatase of the Nudix hydrolase family; converts diphosphates of damaged forms of thiamin to monophosphates; GST fusion protein is a Dbf2p-Mob1p phosphorylation target in a proteome chip analysis; synthetic lethal with PH085 deletion; plays a role in restricting Ty1 transposition","termid":"PBO:0082100"}


id: MONDO:0020371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Essential iris atrophy is a clinical variant of iridocorneal endothelial (ICE) syndrome, characterized by progressive iris atrophy and holes present on the surface of the iris, corneal edema, corectopia, uveal ectropion and anterior synechiae. Secondary glaucoma is also a common complication of the disease.","definition_xrefs":["Orphanet:98981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iridocorneal endothelial syndrome","termid":"MONDO:0018988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"essential iris atrophy","secondary_identifiers":["ICD9:364.51","NORD:1109","UMLS:C0271111","MEDGEN:543177","SCTID:25913001","GARD:19611"],"termid":"MONDO:0020371","xrefs":{"Monarch":{"xref_id":"0020371"}}}


id: SO:0001465
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UST located in the 3'UTR of a protein-coding transcript.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UST","termid":"SO:0001464"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_UST","synonyms":[{"name":"3' UST","type":"related"}],"termid":"SO:0001465"}


id: MONDO:0001628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fungal infection of the nail, usually caused by dermatophytes; yeasts; or nondermatophyte molds.","definition_xrefs":["MESH:D014009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"},{"relation_name":"is_a","term_name":"nail infection","termid":"MONDO:0024487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tinea unguium","secondary_identifiers":["UMLS:C0040261","ICD9:681.9","ICD10CM:B35.1","MEDGEN:11825","NCIT:C112214","DOID:13074"],"synonyms":[{"name":"cellulitis and abscess","type":"related"},{"name":"cellulitis and abscess of buttock","type":"exact"},{"name":"cellulitis and abscess of face","type":"exact"},{"name":"cellulitis and abscess of finger","type":"exact"},{"name":"cellulitis and abscess of finger and toe","type":"exact"},{"name":"cellulitis and abscess of gluteal region","type":"exact"},{"name":"cellulitis and abscess of trunk","type":"exact"},{"name":"cellulitis and abscess of upper arm and forearm","type":"exact"},{"name":"dermatophytic onychia","type":"exact"},{"name":"dermatophytic onychomycosis","type":"exact"},{"name":"dermatophytosis of nail","type":"exact"},{"name":"nail dermatophytosis","type":"exact"},{"name":"onychomycosis","type":"exact"},{"name":"onychomycosis due to dermatophyte","type":"exact"},{"name":"tinea unguium","type":"exact"}],"termid":"MONDO:0001628","xrefs":{"Monarch":{"xref_id":"0001628"}}}


id: PBO:0086024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; transcript accumulates in response to any combination of stress conditions","termid":"PBO:0086024"}


id: MONDO:0015298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pellucid marginal degeneration","secondary_identifiers":["Orphanet:137672","UMLS:C0339288","icd11.foundation:1662005062","GARD:11895","MEDGEN:573069"],"termid":"MONDO:0015298","xrefs":{"Monarch":{"xref_id":"0015298"}}}


id: PBO:0073043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 1","termid":"PBO:0073043"}


id: FYPO:0007008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase III is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0006386","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"normal transcription termination","termid":"FYPO:0007463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000294","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal termination of RNA polymerase III transcription","synonyms":[{"name":"normal RNA polymerase III transcription termination","type":"exact"},{"name":"normal termination of RNA polymerase III transcription during mitotic cell cycle","type":"related"},{"name":"normal termination of RNA polymerase III transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0007008"}


id: MONDO:0019196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Foix-Alajouanine syndrome, also called subacute ascending necrotising myelitis, results from chronic congestion of the extrinsic pial veins of the spinal cord and of the intrinsic subpial network. It is characterized by progressive ascending deficit over a period of several months or years.","definition_xrefs":["Orphanet:79093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteriovenous hemangioma/malformation","termid":"MONDO:0001256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Foix-Alajouanine syndrome","secondary_identifiers":["SCTID:230379007","ICD9:323.9","MEDGEN:141629","UMLS:C0472347","GARD:4163","icd11.foundation:937824238"],"synonyms":[{"name":"Subacute angiohypertrophic myelomalacia","type":"exact"},{"name":"Subacute ascending necrotizing myelitis","type":"exact"},{"name":"Subacute necrotizing myelitis","type":"exact"},{"name":"angiodysgenetic necrotizing myelopathy","type":"exact"},{"name":"familial osteosclerosis with abnormalities of the nervous system and meninges","type":"exact"}],"termid":"MONDO:0019196","xrefs":{"Monarch":{"xref_id":"0019196"}}}


id: GO:0010460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency or rate of heart contraction.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"},{"relation_name":"is_a","term_name":"positive regulation of heart contraction","termid":"GO:0045823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate","termid":"GO:0010460"}


id: PBO:0066454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 6, pseudogene","termid":"PBO:0066454"}


id: GO:0052614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMNH2 + NADH + O2 + uracil = (Z)-3-ureidoacrylate + FMN + H+ + H2O + NAD+. Can also use thymine as a substrate.","definition_xrefs":["PMID:20369853","PMID:20400551","RHEA:31587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"uracil oxygenase activity","secondary_identifiers":["MetaCyc:RXN0-6444","EC:1.14.99.46"],"synonyms":[{"name":"pyrimidine oxygenase activity","type":"broad"}],"termid":"GO:0052614"}


id: RO:0002243
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A broad relationship between an exposure event or process and the course takes from the source to the target.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_exposure_to","termid":"RO:0002244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_exposure_transport_path","termid":"RO:0002243"}


id: GO:0006732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving coenzymes, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme metabolic process (obsolete GO:0006732)","synonyms":[{"name":"coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"coenzyme and prosthetic group metabolism","type":"broad"},{"name":"coenzyme metabolism","type":"exact"},{"name":"group transfer coenzyme metabolic process","type":"narrow"},{"name":"group transfer coenzyme metabolism","type":"narrow"}],"termid":"GO:0006732"}


id: GO:2000755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sphingomyelin catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid catabolic process","termid":"GO:0060697"},{"relation_name":"is_a","term_name":"regulation of sphingomyelin catabolic process","termid":"GO:2000754"},{"relation_name":"positively_regulates","term_name":"sphingomyelin catabolic process","termid":"GO:0006685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of sphingomyelin catabolic process","synonyms":[{"name":"positive regulation of sphingomyelin breakdown","type":"exact"},{"name":"positive regulation of sphingomyelin catabolism","type":"exact"},{"name":"positive regulation of sphingomyelin degradation","type":"exact"}],"termid":"GO:2000755"}


id: MONDO:0015097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital aortic valve stenosis","termid":"MONDO:0017735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortic valve dysplasia","secondary_identifiers":["SCTID:253604004","UMLS:C0344993","GARD:19776","ICD9:746.89","MEDGEN:576679","Orphanet:101043"],"termid":"MONDO:0015097","xrefs":{"Monarch":{"xref_id":"0015097"}}}


id: PR:000037030
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the rho3 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho3 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC23C4.08","synonyms":[{"name":"Spom-rho3","type":"exact"}],"termid":"PR:000037030"}


id: PBO:0073509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 3C","termid":"PBO:0073509"}


id: GO:0051228
data:
  {"annotated_genes":["SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75853],"is_not":false,"summary":null,"term":"GO:0051228"}]},"cv_name":"biological_process","definition":"The controlled breakdown of the spindle during a mitotic cell cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle organization","termid":"GO:0007052"},{"relation_name":"is_a","term_name":"spindle disassembly","termid":"GO:0051230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"mitotic spindle disassembly","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"mitotic spindle breakdown","type":"exact"},{"name":"mitotic spindle catabolism","type":"exact"},{"name":"mitotic spindle degradation","type":"exact"},{"name":"spindle breakdown during mitosis","type":"exact"},{"name":"spindle degradation during mitosis","type":"exact"},{"name":"spindle disassembly during mitosis","type":"exact"}],"termid":"GO:0051228","terms_by_termid":{"GO:0051228":null}}


id: GO:0031651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate or extent of heat generation.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heat generation","termid":"GO:0031650"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"heat generation","termid":"GO:0031649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heat generation","synonyms":[{"name":"down regulation of heat generation","type":"exact"},{"name":"down-regulation of heat generation","type":"exact"},{"name":"downregulation of heat generation","type":"exact"},{"name":"inhibition of heat generation","type":"narrow"}],"termid":"GO:0031651"}


id: GO:0102180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-hydroxymethyl-stigmasta-7,24(241)-dien-3beta-ol + NADH + O2 + H+ = 4alpha-formyl-stigmasta-7,24(241)-dien-3beta-ol + NAD + 2 H2O.","definition_xrefs":["GOC:pz","RHEA:59036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4alpha-hydroxymethyl-stigmasta-7,24(241)-dien-3beta-ol-methyl oxidase activity","secondary_identifiers":["MetaCyc:RXN-11936"],"termid":"GO:0102180"}


id: PBO:0043068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRM3 antisense RNA 1","termid":"PBO:0043068"}


id: PBO:0077423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 161B","termid":"PBO:0077423"}


id: PBO:0063725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerophosphate synthase 1","termid":"PBO:0063725"}


id: GO:1905452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway that is involved in regulation of stem cell proliferation.","definition_xrefs":["GO_REF:0000060","GOC:PARL","PMID:25640183","GOC:bc","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in regulation of stem cell proliferation (obsolete GO:1905452)","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin involved in regulation of stem cell proliferation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in regulation of stem cell proliferation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in regulation of stem cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in regulation of stem cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in regulation of stem cell proliferation","type":"exact"},{"name":"frizzled-1 receptor signaling pathway involved in regulation of stem cell proliferation","type":"narrow"}],"termid":"GO:1905452"}


id: MONDO:0017328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"embryonal carcinoma","termid":"MONDO:0005440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"non-central nervous system-localized embryonal carcinoma","secondary_identifiers":["Orphanet:289362","GARD:21137","UMLS:C5679946","MEDGEN:1842755"],"synonyms":[{"name":"non-CNS-localized embryonal carcinoma","type":"exact"}],"termid":"MONDO:0017328","xrefs":{"Monarch":{"xref_id":"0017328"}}}


id: SO:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, located immediately upstream of some TATA box elements at -37 to -32 with respect to the TSS (+1). Consensus sequence is (G|C)(G|C)(G|A)CGCC. Binds TFIIB.","definition_xrefs":["PMID:12651739","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BREu_motif","synonyms":[{"name":"B-recognition element","type":"exact"},{"name":"BRE motif","type":"exact"},{"name":"BREu","type":"related"},{"name":"BREu motif","type":"exact"},{"name":"TFIIB recognition element","type":"related"},{"name":"transcription factor B-recognition element","type":"exact"}],"termid":"SO:0000016"}


id: PBO:0057871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3179-4","termid":"PBO:0057871"}


id: PBO:0043892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIM1 divergent transcript","termid":"PBO:0043892"}


id: MONDO:0009530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lipoid proteinosis (LP) is a rare genodermatosis characterized clinically by mucocutaneous lesions, hoarseness developing in early childhood and, at times, neurological complications.","definition_xrefs":["Orphanet:530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"lipoid proteinosis","secondary_identifiers":["DOID:14498","ICD9:272.8","MEDGEN:6112","NANDO:2200608","UMLS:C0023795","GARD:3268","icd11.foundation:326368380","SCTID:38692000","OMIM:247100","NCIT:C84829","MESH:D008065"],"synonyms":[{"name":"Urbach Wiethe disease","type":"related"},{"name":"Urbach-Wiethe disease","type":"exact"},{"name":"hyalinosis cutis Et mucosae","type":"related"},{"name":"hyalinosis cutis et mucosae","type":"exact"},{"name":"lipid proteinosis","type":"exact"},{"name":"lipoid proteinosis","type":"exact"},{"name":"lipoid proteinosis of Urbach and Wiethe","type":"related"},{"name":"lipoproteinosis","type":"exact"}],"termid":"MONDO:0009530","xrefs":{"Monarch":{"xref_id":"0009530"}}}


id: GO:0046468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidyl-N-monomethylethanolamine (PMME), a derivative of phosphatidylethanolamine with a methylated amine group. Present in trace levels in plants and slightly higher in bacteria.","definition_xrefs":["PMID:35071223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylethanolamine metabolic process","termid":"GO:0046337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidyl-N-monomethylethanolamine metabolic process","synonyms":[{"name":"PMME metabolic process","type":"exact"},{"name":"PMME metabolism","type":"exact"},{"name":"phosphatidyl-N-monomethylethanolamine metabolism","type":"exact"}],"termid":"GO:0046468"}


id: PR:000027567
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mei2 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis protein mei2","synonyms":[{"name":"mei2","type":"exact"}],"termid":"PR:000027567"}


id: GO:0010983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of high-density lipoprotein particle clearance. High-density lipoprotein particle clearance is the process in which a high-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of high-density lipoprotein particle clearance","termid":"GO:0010982"},{"relation_name":"is_a","term_name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"},{"relation_name":"positively_regulates","term_name":"high-density lipoprotein particle clearance","termid":"GO:0034384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of high-density lipoprotein particle clearance","termid":"GO:0010983"}


id: GO:0046944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a carbamoyl group to a protein amino acid. A carbamoyl group is the acyl group -CO-NH2.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein carbamoylation","synonyms":[{"name":"protein amino acid carbamoylation","type":"exact"}],"termid":"GO:0046944"}


id: PBO:0048758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2A pseudogene 1","termid":"PBO:0048758"}


id: MONDO:0002673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dermatofibrosarcoma protuberans (obsolete MONDO:0002673)","termid":"MONDO:0002673","xrefs":{"Monarch":{"xref_id":"0002673"}}}


id: PBO:0012018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uricil/uridine permese transmembrane transporter family (predicted)","termid":"PBO:0012018"}


id: GO:0010726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving hydrogen peroxide.","definition_xrefs":["GOC:tb","GOC:hjd","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide metabolic process","termid":"GO:0010310"},{"relation_name":"is_a","term_name":"positive regulation of reactive oxygen species metabolic process","termid":"GO:2000379"},{"relation_name":"positively_regulates","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrogen peroxide metabolic process","synonyms":[{"name":"positive regulation of hydrogen peroxide metabolism","type":"exact"}],"termid":"GO:0010726"}


id: PBO:0070311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, Ro60-associated Y3","termid":"PBO:0070311"}


id: PBO:0085687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in recovery from cell cycle arrest; acts in response to pheromone; also involved in regulation of intra-S DNA damage checkpoint and autophagy; is essential for dephosphorylation of Atg13p; interacts with Far3p, Far7p, Far8p, Far9p, Far10p and with the phosphatases Pph21p, Pph22p and Pph3p; has similarity to the N- and C-termini of N. crassa HAM-2; similar to human Fam40A and Fam40B","termid":"PBO:0085687"}


id: GO:0008220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The processes that cause necrosis, the death of tissues, in another organism.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete necrosis (obsolete GO:0008220)","synonyms":[{"name":"necrosis","type":"exact"}],"termid":"GO:0008220"}


id: GO:0002838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to tumor cell","termid":"GO:0002835"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"immune response to tumor cell","termid":"GO:0002418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of immune response to tumor cell","synonyms":[{"name":"down regulation of immune response to tumor cell","type":"exact"},{"name":"down-regulation of immune response to tumor cell","type":"exact"},{"name":"downregulation of immune response to tumor cell","type":"exact"},{"name":"inhibition of immune response to tumor cell","type":"narrow"},{"name":"negative regulation of immune response to tumour cell","type":"exact"}],"termid":"GO:0002838"}


id: GO:0047451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3R)-3-hydroxyoctanoyl-[acyl-carrier protein] = H2O + (2E)-octenoyl-[acyl-carrier protein].","definition_xrefs":["PMID:8910376"],"gene_count":0,"genotype_count":0,"name":"obsolete (3R)-3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity (obsolete GO:0047451)","synonyms":[{"name":"(3R)-3-hydroxyoctanoyl-[acyl-carrier-protein] hydro-lyase activity","type":"related"},{"name":"3-hydroxyoctanoyl-ACP dehydratase activity","type":"exact"},{"name":"3-hydroxyoctanoyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity","type":"broad"}],"termid":"GO:0047451"}


id: GO:0046345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid metabolic process","termid":"GO:0009687"},{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"apocarotenoid catabolic process","termid":"GO:0043290"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"abscisic acid catabolic process","synonyms":[{"name":"abscisic acid breakdown","type":"exact"},{"name":"abscisic acid catabolism","type":"exact"},{"name":"abscisic acid degradation","type":"exact"}],"termid":"GO:0046345"}


id: PBO:0034142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_regulogy_relationship_with","termid":"PBO:0034142"}


id: GO:1990889
data:
  {"annotated_genes":["SJAG_00545"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108234],"is_not":false,"summary":null,"term":"GO:1990889"}]},"cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H4 trimethylated at lysine 20.","definition_xrefs":["PMID:20943666","PMID:22150589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 reader activity","termid":"GO:0140008"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140566","GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"histone H4K20me3 reader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H4K20me3 modified histone binding","type":"narrow"}],"termid":"GO:1990889","terms_by_termid":{"GO:1990889":null}}


id: GO:0015954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a pyrimidine ribonucleotide is synthesized from another pyrimidine ribonucleotide.","definition_xrefs":["ISBN:0471394831","GOC:mah","ISBN:0306444747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide interconversion","termid":"GO:0015953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleotide interconversion","termid":"GO:0015954"}


id: PBO:0078968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 7-1","termid":"PBO:0078968"}


id: PBO:0109455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1341, pseudogene","termid":"PBO:0109455"}


id: MONDO:0017290
data:
  {"annotated_genes":["SJAG_00938","SJAG_03363","SJAG_05194","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[87387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013995"},{"annotations":[87325,87324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[86229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[87263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","definition":"An instance of intrahepatic cholestasis that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"intrahepatic cholestasis","termid":"MONDO:0019072"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"familial intrahepatic cholestasis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:74162007","Orphanet:284385","ICD9:576.8","GARD:21119"],"synonyms":[{"name":"hereditary intrahepatic cholestasis","type":"exact"}],"termid":"MONDO:0017290","terms_by_termid":{"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0013995":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0017290"}}}


id: PBO:0039341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALS2 C-terminal like","termid":"PBO:0039341"}


id: GO:0019099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in a female organism's germ line.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary sex determination, germ-line","termid":"GO:0007542"},{"relation_name":"is_a","term_name":"germ-line sex determination","termid":"GO:0018992"},{"relation_name":"is_a","term_name":"female sex determination","termid":"GO:0030237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line sex determination","secondary_identifiers":["GO:0007544"],"synonyms":[{"name":"sex determination, female germ-line determination","type":"exact"}],"termid":"GO:0019099"}


id: SO:0001425
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read produced by ligation based sequencing technologies.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligation_based_read","synonyms":[{"name":"ligation based read","type":"related"}],"termid":"SO:0001425"}


id: PATO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being arranged in a systematic fashion.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organization quality","termid":"PATO:0002264"}


id: GO:0008051
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A complex that possesses farnesyl-diphosphate farnesyl transferase activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete farnesyl-diphosphate farnesyl transferase complex (obsolete GO:0008051)","synonyms":[{"name":"farnesyl-diphosphate farnesyl transferase complex","type":"exact"}],"termid":"GO:0008051"}


id: PBO:0088809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF Sec72","termid":"PBO:0088809"}


id: PBO:0005007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad16 homolog Rhp16","termid":"PBO:0005007"}


id: GO:0022015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of a radial glial cell in the pallium. A radial glial cell is a precursor cell that gives rise to neurons and astrocytes.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"pallium cell proliferation in forebrain","termid":"GO:0022013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glial cell division in pallium","termid":"GO:0022015"}


id: MONDO:1010899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in Japanese macaques. Affected macaques display progressive neurological deficits including visual impairment, tremor, incoordination, ataxia and impaired balance.","definition_xrefs":["PMID:30048804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, Japanese macaque","secondary_identifiers":["OMIA:001962-9542"],"synonyms":[{"name":"neuronal ceroid lipofuscinosis, 7, Japanese macaque","type":"related"}],"termid":"MONDO:1010899","xrefs":{"Monarch":{"xref_id":"1010899"}}}


id: PR:O94682
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis20 gene.","definition_xrefs":["UniProtKB:O94682","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C776.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.16","synonyms":[{"name":"Spom972h-mis20","type":"exact"}],"termid":"PR:O94682"}


id: PBO:0018129
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methemoglobinemia","termid":"PBO:0018129"}


id: PBO:0078888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 1-5","termid":"PBO:0078888"}


id: FYPO:0008014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during mitotic M phase in which the localization of a protein to CENP-A containing chromatin is decreased.","definition_xrefs":["PMID:35970865","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to CENP-A containing chromatin","termid":"FYPO:0004313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to CENP-A containing chromatin during mitosis","synonyms":[{"name":"decreased protein localisation to CENP-A containing chromatin during mitosis","type":"exact"},{"name":"decreased protein localization to centromeric core region chromatin during mitosis","type":"exact"}],"termid":"FYPO:0008014"}


id: PBO:0080711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 11","termid":"PBO:0080711"}


id: GO:0080179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-methylguanosine.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine-containing compound metabolic process","termid":"GO:1901068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"1-methylguanosine metabolic process","termid":"GO:0080179"}


id: MONDO:0968974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B-cell lymphoma that is characterized by large lymphoid cells of the B-cell lineage that by definition form sheets or clusters.","definition_xrefs":["DOID:0081452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell neoplasm","termid":"MONDO:0004095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"large B-cell lymphoma","secondary_identifiers":["MEDGEN:1853176","UMLS:C5212315"],"termid":"MONDO:0968974","xrefs":{"Monarch":{"xref_id":"0968974"}}}


id: PBO:0084677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial aspartyl-tRNA synthetase; required for acylation of aspartyl-tRNA; yeast and bacterial aspartyl-, asparaginyl-, and lysyl-tRNA synthetases contain regions with high sequence similarity, suggesting a common ancestral gene","termid":"PBO:0084677"}


id: PBO:0030558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate_import_during_nitrogen_starvation","termid":"PBO:0030558"}


id: PBO:0001484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute binding protein 2","termid":"PBO:0001484"}


id: FYPO:0007500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy does not occur when the cell is subject to sulfur starvation.","definition_xrefs":["GO:0016236","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished macroautophagy","termid":"FYPO:0000380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished macroautophagy during sulfur starvation","synonyms":[{"name":"abolished macroautophagy during cellular response to sulfur starvation","type":"exact"},{"name":"abolished macroautophagy during sulfur depletion","type":"exact"},{"name":"abolished macroautophagy during sulfur deprivation","type":"exact"},{"name":"abolished macroautophagy during sulphur starvation","type":"exact"},{"name":"macroautophagy abolished during sulfur starvation","type":"exact"}],"termid":"FYPO:0007500"}


id: PBO:0078934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 2-1","termid":"PBO:0078934"}


id: PBO:0082252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the translation initiation factor eIF2; eIF2 is involved in identification of the start codon; phosphorylation of Ser51 is required for regulation of translation by inhibiting the exchange of GDP for GTP; protein abundance increases in response to DNA replication stress","termid":"PBO:0082252"}


id: MONDO:0023043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia alopecia preaxial polydactyly","secondary_identifiers":["UMLS:C2931691","MESH:C538016","MEDGEN:419138","GARD:2040"],"synonyms":[{"name":"absence of body & scalp hair, rounded nails, thin dental enamel, preaxial polydactyly of the feet, and unusual facial appearance","type":"related"}],"termid":"MONDO:0023043","xrefs":{"Monarch":{"xref_id":"0023043"}}}


id: PBO:0049429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 6","termid":"PBO:0049429"}


id: FYPO:0006444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which regulation of transcription in response to starvation for one or more amino acids is abnormal.","definition_xrefs":["PMID:29432178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation during vegetative growth","termid":"FYPO:0001339"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"abnormal transcriptional response to amino acid starvation","synonyms":[{"name":"abnormal regulation of transcription from RNA polymerase II promoter in response to amino acid starvation","type":"exact"}],"termid":"FYPO:0006444"}


id: PBO:0091011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent flavin oxidoreductase, implicated in cellular detoxification from family members","termid":"PBO:0091011"}


id: PBO:0052831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 224, pseudogene","termid":"PBO:0052831"}


id: PBO:0091507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase","termid":"PBO:0091507"}


id: PBO:0042618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin licensing and DNA replication factor 1","termid":"PBO:0042618"}


id: PBO:0059539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription factor binding site Y","termid":"PBO:0059539"}


id: GO:0046161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of heme a, a derivative of heme found in cytochrome aa3.","definition_xrefs":["GOC:curators","PMID:28352909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme catabolic process","termid":"GO:0042167"},{"relation_name":"is_a","term_name":"heme a metabolic process","termid":"GO:0046160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme a catabolic process","synonyms":[{"name":"haem a catabolic process","type":"exact"},{"name":"haem a catabolism","type":"exact"},{"name":"heme a breakdown","type":"exact"},{"name":"heme a catabolism","type":"exact"},{"name":"heme a degradation","type":"exact"}],"termid":"GO:0046161"}


id: MONDO:0958006
data:
  {"annotated_genes":["SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86435],"is_not":false,"summary":null,"term":"MONDO:0958006"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Guo-Campeau type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620663","UMLS:C5882737","MEDGEN:1844202"],"termid":"MONDO:0958006","terms_by_termid":{"MONDO:0958006":null},"xrefs":{"Monarch":{"xref_id":"0958006"}}}


id: PBO:0057759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1972-2","termid":"PBO:0057759"}


id: MONDO:0002064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign diffuse vascular proliferation in the breast. It is characterized by the formation of capillary-sized and cavernous vascular spaces.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capillary disorder","termid":"MONDO:0001574"},{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast angiomatosis","secondary_identifiers":["MEDGEN:307304","UMLS:C1511284","DOID:1637","NCIT:C40381"],"termid":"MONDO:0002064","xrefs":{"Monarch":{"xref_id":"0002064"}}}


id: PBO:0042846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP53 pseudogene 1","termid":"PBO:0042846"}


id: GO:0050654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chondroitin sulfate proteoglycans, which consist of a core protein linked to a chondroitin sulfate glycosaminoglycan. The chondroitin sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-D-glucuronic acid-beta-(1,3)-N-acetyl-D-galactosamine, the latter of which can be O-sulfated.","definition_xrefs":["PMID:17239763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"chondroitin sulfate proteoglycan metabolic process","synonyms":[{"name":"chondroitin sulfate proteoglycan metabolism","type":"exact"},{"name":"chondroitin sulphate proteoglycan metabolic process","type":"exact"},{"name":"chondroitin sulphate proteoglycan metabolism","type":"exact"}],"termid":"GO:0050654"}


id: PBO:0063492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1 pseudogene 3","termid":"PBO:0063492"}


id: MONDO:0020399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoplasia of the mitral valve annulus is a rare, congenital, mitral valve malformation characterized by hypoplastic annulus which usually appears within a complete mitral valve hypoplasia, causing mitral valve stenosis. Association with other cardiac malformation is common, including coarctation of the aorta, aortic valve stenosis, Shone complex and hypoplastic left heart syndrome.","definition_xrefs":["Orphanet:99058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypoplasia of the mitral valve annulus","secondary_identifiers":["MEDGEN:757607","SCTID:449270002","UMLS:C3165203","ICD9:746.89","ICD10CM:Q23.2","GARD:19625"],"termid":"MONDO:0020399","xrefs":{"Monarch":{"xref_id":"0020399"}}}


id: GO:1990024
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Synaptic bouton found in spinal cord on the soma and proximal dendrites of motor neurons.","definition_xrefs":["NIF_Subcellular:nlx_subcell_100208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"C bouton","termid":"GO:1990024"}


id: MOD:00084
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6,N6-dimethyl-L-lysine.","definition_xrefs":["PubMed:12964758","PubMed:10550045","RESID:AA0075","PubMed:14570711","PubMed:8453381","Unimod:36#K","PubMed:3100523","OMSSA:36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated lysine","termid":"MOD:00663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N6,N6-dimethyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(dimethylamino)hexanoic acid","type":"exact"},{"name":"Dimethyl","type":"related"},{"name":"MOD_RES N6,N6-dimethyllysine","type":"exact"},{"name":"N(zeta)-dimethyllysine","type":"exact"},{"name":"N6,N6-dimethyl-L-lysine","type":"exact"},{"name":"N6,N6-dimethylated L-lysine","type":"exact"},{"name":"N6Me2Lys","type":"exact"},{"name":"di-Methylation","type":"related"},{"name":"dimethylk","type":"exact"},{"name":"epsilon-dimethyllysine","type":"exact"},{"name":"lysine derivative Lys(y)","type":"exact"}],"termid":"MOD:00084"}


id: MONDO:0015211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A intestinal malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic intestinal malformation (obsolete MONDO:0015211)","secondary_identifiers":["Orphanet:108967"],"synonyms":[{"name":"isolated intestinal malformation","type":"exact"},{"name":"nonsyndromic intestinal malformation","type":"exact"}],"termid":"MONDO:0015211","xrefs":{"Monarch":{"xref_id":"0015211"}}}


id: PBO:0045476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate rich 1","termid":"PBO:0045476"}


id: PBO:0030163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_phosphatidylserine_level","termid":"PBO:0030163"}


id: PBO:0052622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 1","termid":"PBO:0052622"}


id: MONDO:0009544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephaly","termid":"MONDO:0016608"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrocephaly/megalencephaly syndrome, autosomal recessive","secondary_identifiers":["MEDGEN:812742","OMIM:248000","UMLS:C3806412","MESH:C537453"],"synonyms":[{"name":"Fryns Dereymaeker Haegeman syndrome","type":"related"},{"name":"MGCPH","type":"related"},{"name":"intellectual disability, macrocephaly, short stature and craniofacial dysmorphism","type":"related"},{"name":"macrocephaly/megalencephaly syndrome, autosomal recessive","type":"exact"},{"name":"mental retardation, macrocephaly, short stature and craniofacial dysmorphism","type":"related"}],"termid":"MONDO:0009544","xrefs":{"Monarch":{"xref_id":"0009544"}}}


id: GO:0098771
data:
  {"annotated_genes":["SJAG_01803","SJAG_00802","SJAG_03401","SJAG_01990","SJAG_02532","SJAG_01000","SJAG_04757","SJAG_04677","SJAG_03631","SJAG_00532","SJAG_02457","SJAG_04870","SJAG_00222","SJAG_04760","SJAG_01007","SJAG_04675","SJAG_03667","SJAG_00232","SJAG_04607","SJAG_03061","SJAG_04031","SJAG_04743","SJAG_03866","SJAG_01694","SJAG_04867","SJAG_03862","SJAG_03519","SJAG_01713","SJAG_03644","SJAG_00328","SJAG_05325","SJAG_03850","SJAG_00923","SJAG_04698","SJAG_01541","SJAG_03516","SJAG_03879","SJAG_03624","SJAG_00244","SJAG_04242","SJAG_01435","SJAG_00822","SJAG_04167","SJAG_01353","SJAG_03528","SJAG_04584","SJAG_02968","SJAG_02399","SJAG_04111","SJAG_02578","SJAG_02240","SJAG_04185","SJAG_00668","SJAG_02474","SJAG_01078","SJAG_01400","SJAG_00916","SJAG_04032","SJAG_04096","SJAG_02019","SJAG_03793","SJAG_00792","SJAG_02834","SJAG_02735","SJAG_04028","SJAG_02883","SJAG_04403","SJAG_04892","SJAG_02080","SJAG_01004","SJAG_02847"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94442,94449,100807,78022,104099],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[73820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055064"},{"annotations":[71161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[78708,75550,73918,80611,98433,109109,70532,73924,100237,71846,72694,73793,113668,118874,71428,80329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[108161,100479,78414,93479,75263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[74643,78415,58998,94397,104571,75264,71519,78356,92645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[70520,74796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[76175,73971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[108004,102909,92476,102911,107886,109342,102910,97512,115351,114906,89056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030643"},{"annotations":[95771,70933,78465,100238,72639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[75091,76240,77468,100480,73196,78664,104489,95062,104626,103887,114646,74611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[104101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033212"},{"annotations":[113519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[57576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010960"},{"annotations":[73821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055075"},{"annotations":[92791,78025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[69515,62037,62141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of inorganic ions within an organism or cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical 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ion homeostasis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0098771","terms_by_termid":{"GO:0006874":null,"GO:0006878":null,"GO:0006879":null,"GO:0006882":null,"GO:0010106":null,"GO:0010960":null,"GO:0010961":null,"GO:0030007":null,"GO:0030026":null,"GO:0030643":null,"GO:0032468":null,"GO:0033212":null,"GO:0033214":null,"GO:0033215":null,"GO:0055064":null,"GO:0055075":null,"GO:0098711":null}}


id: GO:0030008
data:
  {"annotated_genes":["SJAG_02655","SJAG_00850","SJAG_03467","SJAG_02525","SJAG_04021","SJAG_03663","SJAG_04837","SJAG_01415","SJAG_00820","SJAG_04358","SJAG_04618","SJAG_02750"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102841,110128,75422,89002,97630,89686,99424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990070"},{"annotations":[75423,103687,99425,71912,89687,110129,89003,100083,97631,102842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990071"},{"annotations":[99426,89004,75424,102843,97632,78019,110130,73600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990072"}]},"cv_name":"cellular_component","definition":"A large complex that acts as a tethering factor involved in transporting vesicles from the ER through the Golgi to the plasma membrane. A TRAPP (transport protein particle) complex has a core set of proteins which are joined by specific subunits depending on the cellular component where a given TRAPP complex is active.","definition_xrefs":["GOC:vw","GOC:bhm","PMID:22669257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00820":null,"SJAG_00850":null,"SJAG_01415":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_02750":null,"SJAG_03467":null,"SJAG_03663":null,"SJAG_04021":null,"SJAG_04358":null,"SJAG_04618":null,"SJAG_04837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TRAPP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:TRAPP_complex"],"synonyms":[{"name":"TRAPP1","type":"narrow"},{"name":"TRAPP2","type":"narrow"},{"name":"transport protein particle","type":"exact"},{"name":"transport protein particle complex","type":"exact"}],"termid":"GO:0030008","terms_by_termid":{"GO:1990070":null,"GO:1990071":null,"GO:1990072":null}}


id: MONDO:1011872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy, non-human animal","secondary_identifiers":["OMIA:001292"],"termid":"MONDO:1011872","xrefs":{"Monarch":{"xref_id":"1011872"}}}


id: PBO:0087294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Single stranded DNA-binding protein found at TG1-3 telomere G-tails; key roles in regulation of telomerase, telomere end protection, conventional telomere replication; regulates telomere replication through recruitment of specific sub-complexes, essential function is telomere capping; forms homodimer via N-terminus; disruption of dimerization leads to short telomeres; autophagy and proteasome are involved in Cdc13p degradation; differentially phosphorylated through cell cycle","termid":"PBO:0087294"}


id: SO:1000018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a pyrimidine nucleotide, C or T, into a purine nucleotide, A or G.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transversion","termid":"SO:1000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine_to_purine_transversion","synonyms":[{"name":"pyrimidine to purine transversion","type":"exact"}],"termid":"SO:1000018"}


id: FYECO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which diamide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ diamide","synonyms":[{"name":"+ N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"}],"termid":"FYECO:0000364"}


id: GO:1901070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanosine-containing compounds (guanosines).","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside biosynthetic process","termid":"GO:0046129"},{"relation_name":"is_a","term_name":"guanosine-containing compound metabolic process","termid":"GO:1901068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"guanosine-containing compound biosynthetic process","synonyms":[{"name":"guanosine-containing compound anabolism","type":"exact"},{"name":"guanosine-containing compound biosynthesis","type":"exact"},{"name":"guanosine-containing compound formation","type":"exact"},{"name":"guanosine-containing compound synthesis","type":"exact"},{"name":"guanosines anabolism","type":"exact"},{"name":"guanosines biosynthesis","type":"exact"},{"name":"guanosines biosynthetic process","type":"exact"},{"name":"guanosines formation","type":"exact"},{"name":"guanosines synthesis","type":"exact"}],"termid":"GO:1901070"}


id: MONDO:0020388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"double outlet right ventricle","termid":"MONDO:0018089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"double outlet right ventricle with non-committed subpulmonary ventricular septal defect","secondary_identifiers":["GARD:19617","MEDGEN:365501","icd11.foundation:2032277111","Orphanet:99046","UMLS:C1956410"],"synonyms":[{"name":"DORV with non-committed subpulmonary VSD","type":"exact"}],"termid":"MONDO:0020388","xrefs":{"Monarch":{"xref_id":"0020388"}}}


id: MONDO:0009342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare malformative association, described in only two siblings to date, and characterized by Hirschsprung disease (defined by the presence of an aganglionic segment of variable extent in the terminal part of the colon that leads to the symptoms of intestinal obstruction including constipation and abdominal distension), polydactyly of hands and/or feet, unilateral renal agenesis, hypertelorism and congenital deafness. There have been no further descriptions in the literature since 1988.","definition_xrefs":["Orphanet:2155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Hirschsprung disease-hearing loss-polydactyly syndrome","secondary_identifiers":["SCTID:721221000","MEDGEN:341066","GARD:157","OMIM:235740","UMLS:C1856112","MESH:C565518"],"synonyms":[{"name":"Hirschsprung disease associated with polydactyly, unilateral renal agenesis, hypertelorism, and congenital deafness","type":"narrow"},{"name":"Hirschsprung disease with polydactyly, renal agenesis, and deafness","type":"narrow"},{"name":"Hirschsprung disease, deafness and polydactyly","type":"narrow"},{"name":"Hirschsprung disease-deafness-polydactyly syndrome","type":"narrow"},{"name":"Santos Mateus Leal syndrome","type":"related"},{"name":"Santos-Mateus-Leal syndrome","type":"exact"}],"termid":"MONDO:0009342","xrefs":{"Monarch":{"xref_id":"0009342"}}}


id: GO:0052506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of symbiont ethylene-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway (obsolete GO:0052506)","synonyms":[{"name":"activation by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"narrow"}],"termid":"GO:0052506"}


id: PBO:0038464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCA3 pseudogene 1","termid":"PBO:0038464"}


id: GO:0005919
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septate junction in which regular arrays of electron-dense septae span the intermembrane space.","definition_xrefs":["PMID:11700298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septate junction","termid":"GO:0005918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pleated septate junction","synonyms":[{"name":"pleated desmosome","type":"related"}],"termid":"GO:0005919"}


id: PBO:0078260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable C","termid":"PBO:0078260"}


id: GO:2000702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040036"},{"relation_name":"regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation","synonyms":[{"name":"regulation of FGF receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of FGF receptor signalling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of FGFR signaling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of fibroblast growth factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of fibroblast growth factor receptor signalling pathway of ureteric bud formation","type":"exact"}],"termid":"GO:2000702"}


id: PBO:0043545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type I alpha 2 chain","termid":"PBO:0043545"}


id: MONDO:0017120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other syndrome with a central nervous system malformation as major feature (obsolete MONDO:0017120)","secondary_identifiers":["Orphanet:269531"],"termid":"MONDO:0017120","xrefs":{"Monarch":{"xref_id":"0017120"}}}


id: MONDO:0013628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hyperphosphatasia-intellectual disability syndrome in which the cause of the disease is a mutation in the PGAP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperphosphatasia-intellectual disability syndrome","termid":"MONDO:0016596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"hyperphosphatasia with intellectual disability syndrome 3","secondary_identifiers":["UMLS:C3280153","GARD:18350","DOID:0070435","OMIM:614207","MEDGEN:481783"],"synonyms":[{"name":"HPMRS3","type":"related"},{"name":"PGAP2 hyperphosphatasia-intellectual disability syndrome","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 8","type":"related"},{"name":"hyperphosphatasia with intellectual disability syndrome 3","type":"exact"},{"name":"hyperphosphatasia with intellectual disability syndrome type 3","type":"exact"},{"name":"hyperphosphatasia with mental retardation syndrome 3","type":"exact"},{"name":"hyperphosphatasia with mental retardation syndrome type 3","type":"exact"},{"name":"hyperphosphatasia-intellectual disability syndrome caused by mutation in PGAP2","type":"exact"},{"name":"intellectual disability, autosomal recessive 17","type":"related"},{"name":"intellectual disability, autosomal recessive 21","type":"related"},{"name":"mental retardation, autosomal recessive 17","type":"related"},{"name":"mental retardation, autosomal recessive 21","type":"related"}],"termid":"MONDO:0013628","xrefs":{"Monarch":{"xref_id":"0013628"}}}


id: GO:0047427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-cyano-L-alanine + 2 H2O + H+ = L-aspartate + NH4.","definition_xrefs":["RHEA:11188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"cyanoalanine nitrilase activity","secondary_identifiers":["EC:3.5.5.4","MetaCyc:3.5.5.4-RXN","KEGG_REACTION:R00486"],"synonyms":[{"name":"3-cyano-L-alanine aminohydrolase activity","type":"related"},{"name":"beta-cyanoalanine nitrilase activity","type":"related"}],"termid":"GO:0047427"}


id: PBO:0040985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 family apoptosis regulator BOK","termid":"PBO:0040985"}


id: GO:0035863
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99312],"is_not":false,"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dITP, a deoxyinosine phosphate compound having a triphosphate group at the 5'-position.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate catabolic process","termid":"GO:0009217"},{"relation_name":"is_a","term_name":"dITP metabolic process","termid":"GO:0035862"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dITP catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2'-Deoxyinosine 5'-triphosphate catabolic process","type":"exact"},{"name":"2'-Deoxyinosine-5'-triphosphate catabolic process","type":"exact"},{"name":"dITP breakdown","type":"exact"},{"name":"dITP catabolism","type":"exact"},{"name":"dITP degradation","type":"exact"},{"name":"deoxyinosine 5'-triphosphate catabolic process","type":"exact"},{"name":"deoxyinosine triphosphate (2'-deoxyinosine 5'-triphosphate) catabolic process","type":"exact"}],"termid":"GO:0035863","terms_by_termid":{"GO:0035863":null}}


id: MONDO:0100391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(2;12). (A cytogenetic abnormality that involves a translocation between chromosomes 2 and 12.)","definition_xrefs":["NCIT:C173543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, t(2;12)","synonyms":[{"name":"AML, t(2;12)","type":"exact"}],"termid":"MONDO:0100391","xrefs":{"Monarch":{"xref_id":"0100391"}}}


id: GO:0062182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinoate + O2 + reduced [NADPH--hemoprotein reductase] = all-trans-(4S)-hydroxyretinoate + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:9716180","RHEA:51492","PMID:9250660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid 4-hydroxylase activity","termid":"GO:0008401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"all-trans retinoic acid 4-hydrolase activity","termid":"GO:0062182"}


id: MONDO:0014196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hartsfield-Bixler-Demyer syndrome","secondary_identifiers":["MESH:C564484","MEDGEN:335111","OMIM:615465","SCTID:766032007","UMLS:C1845146","GARD:2725","Orphanet:2117"],"synonyms":[{"name":"HARTSFIELD syndrome","type":"related"},{"name":"HRTFDS","type":"related"},{"name":"Hartsfield-Bixler-Demyer syndrome","type":"exact"},{"name":"holoprosencephaly, ectrodactyly, and bilateral cleft Lip/palate","type":"related"},{"name":"holoprosencephaly-ectrodactyly-cleft lip palate syndrome","type":"exact"},{"name":"holoprosencephaly-ectrodactyly-cleft lip/palate syndrome","type":"exact"}],"termid":"MONDO:0014196","xrefs":{"Monarch":{"xref_id":"0014196"}}}


id: MONDO:0020631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete epileptic encephalopathy, infantile or early childhood (obsolete MONDO:0020627)","termid":"MONDO:0020627"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 92","secondary_identifiers":["DOID:0080471","GARD:16258","OMIM:617829","MEDGEN:1638319","UMLS:C4693362"],"synonyms":[{"name":"DEE92","type":"exact"},{"name":"IECEE2","type":"exact"},{"name":"developmental and epileptic encephalopathy 92","type":"exact"},{"name":"epileptic encephalopathy, infantile or early childhood, 2","type":"exact"}],"termid":"MONDO:0020631","xrefs":{"Monarch":{"xref_id":"0020631"}}}


id: GO:0035439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeranyl diphosphate = halima-5(6),13-dien-15-yl diphosphate.","definition_xrefs":["EC:5.5.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824","GO:0009975"],"is_obsolete":false,"name":"halimadienyl-diphosphate synthase activity","secondary_identifiers":["RHEA:25621"],"synonyms":[{"name":"halima-5(6),13-dien-15-yl-diphosphate lyase (cyclizing)","type":"related"},{"name":"halimadienyl diphosphate synthase activity","type":"related"}],"termid":"GO:0035439"}


id: PBO:0088023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP protein involved in splicing; interacts with the branchpoint-binding protein during the formation of the second commitment complex","termid":"PBO:0088023"}


id: GO:0046998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6R)-2-acetyl-6-(3-acetyl-2,4,6-trihydroxy-5-methylphenyl)-3-hydroxy-6-methylcyclohexa-2,4-dien-1-one + NAD+ = (S)-usnate + 2 H+ + NADH.","definition_xrefs":["RHEA:21876","EC:1.1.1.199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(S)-usnate reductase activity","secondary_identifiers":["KEGG_REACTION:R07345","MetaCyc:1.1.1.199-RXN"],"synonyms":[{"name":"L-usnic acid dehydrogenase activity","type":"related"},{"name":"reduced-(S)-usnate:NAD+ oxidoreductase (ether-bond-forming)","type":"related"}],"termid":"GO:0046998"}


id: PBO:0072734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 4","termid":"PBO:0072734"}


id: GO:2000266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood coagulation, intrinsic pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood coagulation","termid":"GO:0030193"},{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"regulates","term_name":"blood coagulation, intrinsic pathway","termid":"GO:0007597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of blood coagulation, intrinsic pathway","termid":"GO:2000266"}


id: PBO:0079039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-1","termid":"PBO:0079039"}


id: PBO:0058836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8066","termid":"PBO:0058836"}


id: FYPO:0002023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the septum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"},{"relation_name":"output_of","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000032","FYPO:0000631"],"is_obsolete":false,"name":"abnormal septum morphology during vegetative growth","synonyms":[{"name":"abnormal septum morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002023"}


id: PBO:0048667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrokine 2","termid":"PBO:0048667"}


id: GO:0097129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D2 and cyclin-dependent kinase 4 (CDK4). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin D2-CDK4 complex","termid":"GO:0097129"}


id: PR:O14118
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- efm3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-lysine N-methyltransferase efm3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.03","synonyms":[{"name":"Spom972h-efm3","type":"exact"},{"name":"elongation factor methyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14118"}


id: GO:0005989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactose, the disaccharide galactopyranosyl-glucose.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactose metabolic process","termid":"GO:0005988"},{"relation_name":"is_a","term_name":"disaccharide biosynthetic process","termid":"GO:0046351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"lactose biosynthetic process","secondary_identifiers":["Reactome:R-HSA-5653890"],"synonyms":[{"name":"lactose anabolism","type":"exact"},{"name":"lactose biosynthesis","type":"exact"},{"name":"lactose formation","type":"exact"},{"name":"lactose synthesis","type":"exact"}],"termid":"GO:0005989"}


id: MONDO:0018578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypophosphatemic rickets (obsolete MONDO:0018578)","termid":"MONDO:0018578","xrefs":{"Monarch":{"xref_id":"0018578"}}}


id: MOD:01518
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with one of the Applied Biosystems iTRAQ4plex reagent reporter+balance groups.","definition_xrefs":["Unimod:214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged reagent acylated residue","termid":"MOD:01705"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01518"}


id: PBO:0077641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMX4 antisense RNA 1","termid":"PBO:0077641"}


id: PBO:0046674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESX homeobox 1","termid":"PBO:0046674"}


id: GO:0046912
data:
  {"annotated_genes":["SJAG_04688","SJAG_01922","SJAG_04499","SJAG_02841"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003852"},{"annotations":[74674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004108"},{"annotations":[76444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004410"},{"annotations":[80301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004421"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity","termid":"GO:0016746"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01922":null,"SJAG_02841":null,"SJAG_04499":null,"SJAG_04688":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"acyltransferase activity, acyl groups converted into alkyl on transfer","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.3.3.-"],"synonyms":[{"name":"acyltransferase, acyl groups converted into alkyl on transfer","type":"exact"},{"name":"transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer","type":"exact"}],"termid":"GO:0046912","terms_by_termid":{"GO:0003852":null,"GO:0004108":null,"GO:0004410":null,"GO:0004421":null}}


id: FYPO:0007056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of substances via vesicles from the Golgi to other parts of the cell is abnormal..","definition_xrefs":["GO:0006892","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal post-Golgi vesicle-mediated transport","synonyms":[{"name":"abnormal exit from TGN","type":"exact"},{"name":"abnormal post-Golgi transport","type":"exact"},{"name":"abnormal post-Golgi vesicle-mediated transport during mitotic cell cycle","type":"related"},{"name":"abnormal post-Golgi vesicle-mediated transport during vegetative growth","type":"exact"}],"termid":"FYPO:0007056"}


id: PATO:0000172
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000172 relative yield (obsolete PATO:0000172)","termid":"PATO:0000172"}


id: MONDO:0017200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic ovaries-urethral sphincter dysfunction syndrome is characterized by urinary retention and incomplete emptying of the bladder associated with abnormal electromyographic activity. It has been described in 33 women, 14 of whom also had polycystic ovaries.","definition_xrefs":["Orphanet:2795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic ovaries-urethral sphincter dysfunction syndrome","secondary_identifiers":["MESH:C537271","UMLS:C2931462","GARD:2365","MEDGEN:419813"],"synonyms":[{"name":"fowler Christmas Chapple syndrome","type":"related"},{"name":"fowler's syndrome","type":"related"},{"name":"fowler-Christmas-Chapple syndrome","type":"exact"},{"name":"polycystic ovaries urethral sphincter dysfunction","type":"related"},{"name":"voiding dysfunction and polycystic ovaries","type":"related"}],"termid":"MONDO:0017200","xrefs":{"Monarch":{"xref_id":"0017200"}}}


id: PBO:0036258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Pex12 involved in peroxisome organization and biogenesis (predicted)","termid":"PBO:0036258"}


id: GO:0005618
data:
  {"annotated_genes":["SJAG_04723","SJAG_04236","SJAG_01288","SJAG_03483","SJAG_04864","SJAG_06622","SJAG_02649","SJAG_01835","SJAG_00027","SJAG_03903","SJAG_00876","SJAG_01086","SJAG_00620","SJAG_03204","SJAG_06621","SJAG_04184","SJAG_02135","SJAG_02093","SJAG_03295","SJAG_04327","SJAG_04073","SJAG_04067","SJAG_02222","SJAG_05285","SJAG_04720","SJAG_01975","SJAG_00784","SJAG_01321","SJAG_03828","SJAG_01017","SJAG_03057","SJAG_00239","SJAG_01290","SJAG_03013","SJAG_02192","SJAG_00218","SJAG_00096","SJAG_02478","SJAG_04771","SJAG_02916","SJAG_02945","SJAG_00340","SJAG_01755","SJAG_02131","SJAG_01028","SJAG_01970","SJAG_03824","SJAG_04238"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114385,109378,114675,118089,90585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005619"},{"annotations":[108080],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043188"},{"annotations":[92107],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005631"},{"annotations":[89032],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010339"},{"annotations":[107172,103033,116864,103284,103285],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070263"},{"annotations":[109222,90460,102766,118081,109221,91932,78173,72820,109224,101827,113645,115927,94356,77024,109225,76215,109226,118638,73755,115904,74861,106420,109223,71613,73937,114780,109220,76786,113644,107007,115059,90265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009277"},{"annotations":[87857],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005632"},{"annotations":[87961,87962,116120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031160"}]},"cv_name":"cellular_component","definition":"The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.","definition_xrefs":["PMID:15134259","GOC:giardia","ISBN:0198547684","Wikipedia:Microbial_cyst"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00096":null,"SJAG_00218":null,"SJAG_00239":null,"SJAG_00340":null,"SJAG_00620":null,"SJAG_00784":null,"SJAG_00876":null,"SJAG_01017":null,"SJAG_01028":null,"SJAG_01086":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01755":null,"SJAG_01835":null,"SJAG_01970":null,"SJAG_01975":null,"SJAG_02093":null,"SJAG_02131":null,"SJAG_02135":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02478":null,"SJAG_02649":null,"SJAG_02916":null,"SJAG_02945":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03204":null,"SJAG_03295":null,"SJAG_03483":null,"SJAG_03824":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04067":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04327":null,"SJAG_04720":null,"SJAG_04723":null,"SJAG_04771":null,"SJAG_04864":null,"SJAG_05285":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell wall","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cell_wall"],"termid":"GO:0005618","terms_by_termid":{"GO:0005619":null,"GO:0005631":null,"GO:0005632":null,"GO:0009277":null,"GO:0010339":null,"GO:0031160":null,"GO:0043188":null,"GO:0070263":null}}


id: PR:O74371
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC32F12.07c gene.","definition_xrefs":["UniProtKB:O74371","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C32F12.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.07c","synonyms":[{"name":"Spom972h-SPBC32F12.07c","type":"exact"}],"termid":"PR:O74371"}


id: MONDO:0004228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypogonadotropism (obsolete MONDO:0004228)","termid":"MONDO:0004228","xrefs":{"Monarch":{"xref_id":"0004228"}}}


id: PBO:0040280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit alpha 1","termid":"PBO:0040280"}


id: GO:0033852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + 3,5,3'-triiodo-L-thyronine = 3,5,3'-triiodothyropyruvate + L-glutamate.","definition_xrefs":["RHEA:19133","EC:2.6.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"thyroid-hormone transaminase activity","secondary_identifiers":["MetaCyc:THYROID-HORMONE-AMINOTRANSFERASE-RXN","KEGG_REACTION:R03952"],"synonyms":[{"name":"3,5-dinitrotyrosine aminotransferase activity","type":"related"},{"name":"3,5-dinitrotyrosine transaminase activity","type":"related"},{"name":"L-3,5,3'-triiodothyronine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"thyroid hormone aminotransferase activity","type":"related"},{"name":"thyroid-hormone aminotransferase activity","type":"related"}],"termid":"GO:0033852"}


id: PBO:0044756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 39B pseudogene 2","termid":"PBO:0044756"}


id: GO:1990553
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101676],"is_not":false,"summary":null,"term":"GO:1990553"}]},"cv_name":"biological_process","definition":"The process in which 5'-adenylyl sulfate is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:24296033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-adenylyl sulfate transmembrane transport","termid":"GO:1902558"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrial 5'-adenylyl sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990553","terms_by_termid":{"GO:1990553":null}}


id: PBO:0034365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-trophically_interacts_with","termid":"PBO:0034365"}


id: FYPO:0004174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation does not occur in cells of the h+ mating type.","definition_xrefs":["PMID:9003326","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterile","termid":"FYPO:0000280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000301"],"is_obsolete":false,"name":"h+ specific sterility","synonyms":[{"name":"h+-specific sterility","type":"exact"},{"name":"h-plus-specific mating defect","type":"related"},{"name":"h-plus-specific sterility","type":"exact"}],"termid":"FYPO:0004174"}


id: PBO:0073371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTAD3 antisense RNA 1","termid":"PBO:0073371"}


id: PBO:0087510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterodimeric peroxisomal ABC transport complex, with Pxa1p; required for import of long-chain fatty acids into peroxisomes; similar to human adrenoleukodystrophy transportesr ABCD1 and ABCD2, and ALD-related proteins; mutations in ABCD1 cause X-linked adrenoleukodystrophy (X-ALD), a peroxisomal disorder; human ABCD1 and ABCD2 can each partially complement yeast pxa1 pxa2 double null mutant","termid":"PBO:0087510"}


id: GO:1904879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion transmembrane transport via high voltage-gated calcium channel.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23071515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport via high voltage-gated calcium channel","termid":"GO:1902514"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"positively_regulates","term_name":"calcium ion transmembrane transport via high voltage-gated calcium channel","termid":"GO:0061577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion transmembrane transport via high voltage-gated calcium channel","synonyms":[{"name":"activation of generation of L-type calcium current","type":"narrow"},{"name":"positive regulation of generation of L-type calcium current","type":"related"},{"name":"up regulation of generation of L-type calcium current","type":"exact"},{"name":"up-regulation of generation of L-type calcium current","type":"exact"},{"name":"upregulation of generation of L-type calcium current","type":"exact"}],"termid":"GO:1904879"}


id: PBO:0092034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit 9","termid":"PBO:0092034"}


id: PBO:0069047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 293, pseudogene","termid":"PBO:0069047"}


id: PBO:0050253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 31","termid":"PBO:0050253"}


id: PBO:0001974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent 5' to 3' DNA/RNA helicase Sen1","termid":"PBO:0001974"}


id: GO:1905626
data:
  {"annotated_genes":["SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93678],"is_not":false,"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-methionine import across plasma membrane.","definition_xrefs":["PMID:17556368","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-methionine import across plasma membrane","termid":"GO:1905624"},{"relation_name":"positively_regulates","term_name":"L-methionine import across plasma membrane","termid":"GO:1905544"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of L-methionine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905626","terms_by_termid":{"GO:1905626":null}}


id: GO:0055004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the atrial cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac myofibril assembly","termid":"GO:0055003"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell development","termid":"GO:0055014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"atrial cardiac myofibril assembly","synonyms":[{"name":"atrial cardiac myofibril development","type":"exact"},{"name":"atrial heart myofibril development","type":"exact"}],"termid":"GO:0055004"}


id: GO:0141043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont avoids recognition by host's innate immune response by altering, concealing or destroying a conserved symbiont molecule recognized by the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:29101229","PMID:22131330","PMID:26502908","PMID:15014080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of host immune response","termid":"GO:0042783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of host innate immune response","synonyms":[{"name":"evasion of host innate immune recognition","type":"related"},{"name":"evasion of host innate immune response","type":"exact"}],"termid":"GO:0141043"}


id: PBO:0026972
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0026972"}


id: MONDO:0005544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Age-related neuropathological condition with severe neuronal cell loss and gliosis in the hippocampus","definition_xrefs":["EFO:0005678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex disorder","termid":"MONDO:0044996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hippocampal sclerosis of aging","secondary_identifiers":["UMLS:C5691287","MEDGEN:1801569"],"termid":"MONDO:0005544","xrefs":{"Monarch":{"xref_id":"0005544"}}}


id: PBO:0030128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_manganese_level","termid":"PBO:0030128"}


id: MONDO:0007458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digitotalar dysmorphism","termid":"MONDO:0015240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digitotalar dysmorphism; ulnar drift, hereditary","secondary_identifiers":["MEDGEN:342156","SCTID:715314008","OMIM:126050","UMLS:C1852085","GARD:15059"],"synonyms":[{"name":"digitotalar dysmorphism","type":"related"},{"name":"ulnar drift, hereditary","type":"related"}],"termid":"MONDO:0007458","xrefs":{"Monarch":{"xref_id":"0007458"}}}


id: PBO:0006204
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_or_gene_product","termid":"PBO:0006204"}


id: PBO:0017530
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of Sporulation Abnormal mutant","termid":"PBO:0017530"}


id: GO:0031382
data:
  {"annotated_genes":["SJAG_02989","SJAG_01993","SJAG_03453","SJAG_01943","SJAG_02864","SJAG_02700","SJAG_02379","SJAG_01794","SJAG_01894","SJAG_00514","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88600,114626,99222,92855,98613,99303],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[111673,93823,90209,91188,88237],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a cell projection in response to mating pheromone. This process is observed in unicellular fungi.","definition_xrefs":["GOC:mah","PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"},{"relation_name":"part_of","term_name":"cell morphogenesis involved in conjugation with cellular fusion","termid":"GO:0000753"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02379":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"mating projection formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mating projection assembly","type":"exact"},{"name":"mating projection biogenesis","type":"related"},{"name":"shmooing","type":"narrow"}],"termid":"GO:0031382","terms_by_termid":{"GO:1902917":null,"GO:1904600":null}}


id: FYECO:0000278
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with isoleucine as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, isoleucine nitrogen source","termid":"FYECO:0000278"}


id: PBO:0056434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 7","termid":"PBO:0056434"}


id: GO:0098720
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101972],"is_not":false,"summary":null,"term":"GO:0098720"}]},"cv_name":"biological_process","definition":"The directed movement of succinate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate transmembrane transport","termid":"GO:0071422"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"succinate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097404"],"synonyms":[{"name":"succinate import into cell","type":"exact"}],"termid":"GO:0098720","terms_by_termid":{"GO:0098720":null}}


id: PR:O74402
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A chaperone protein ClpB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03391","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 78, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.17c","secondary_identifiers":["UniProtKB:O74402"],"synonyms":[{"name":"Spom972h-clpB","type":"exact"}],"termid":"PR:O74402"}


id: GO:0090557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of a barrier between endothelial cell layers of the intestine to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition.","definition_xrefs":["GOC:krc","PMID:22155109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of endothelial barrier","termid":"GO:0061028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of endothelial intestinal barrier","termid":"GO:0090557"}


id: FYPO:0000683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which the basal activity of an enzyme is increased relative to normal. Basal enzyme activity is the activity observed in the absence of a regulator. Abnormally elevated basal activity may or may not reach the levels observed in the normal activated state.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity phenotype","termid":"FYPO:0000654"},{"relation_name":"output_of","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000652","FYPO:0001985","FYPO:0005447","FYPO:0000654"],"is_obsolete":false,"name":"constitutive catalytic activity","synonyms":[{"name":"constitutive catalytic activity during mitotic cell cycle","type":"related"},{"name":"constitutive catalytic activity during vegetative growth","type":"exact"},{"name":"constitutive enzymatic activity","type":"exact"},{"name":"constitutively active enzyme","type":"related"}],"termid":"FYPO:0000683"}


id: PBO:0056871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence B","termid":"PBO:0056871"}


id: PBO:0081980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 5B","termid":"PBO:0081980"}


id: GO:0045715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of low-density lipoprotein particle receptors.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of low-density lipoprotein particle receptor biosynthetic process (obsolete GO:0045715)","synonyms":[{"name":"down regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"down-regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"downregulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"inhibition of low-density lipoprotein receptor biosynthetic process","type":"narrow"},{"name":"negative regulation of low-density lipoprotein receptor anabolism","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor biosynthesis","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor formation","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor synthesis","type":"exact"}],"termid":"GO:0045715"}


id: PBO:0046504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F1-regulated inhibitor of cell death","termid":"PBO:0046504"}


id: GO:0019645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors other than oxygen to generate a transmembrane electrochemical gradient.","definition_xrefs":["GOC:ai","GOC:mtg_electron_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory electron transport chain","termid":"GO:0022904"},{"relation_name":"part_of","term_name":"anaerobic respiration","termid":"GO:0009061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"anaerobic electron transport chain","termid":"GO:0019645"}


id: GO:0032804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of low-density lipoprotein receptors.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of low-density lipoprotein particle receptor catabolic process","termid":"GO:0032803"},{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process","termid":"GO:0042177"},{"relation_name":"is_a","term_name":"negative regulation of receptor catabolic process","termid":"GO:2000645"},{"relation_name":"negatively_regulates","term_name":"low-density lipoprotein particle receptor catabolic process","termid":"GO:0032802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"negative regulation of low-density lipoprotein particle receptor catabolic process","synonyms":[{"name":"down regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"down-regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"downregulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"inhibition of low-density lipoprotein receptor catabolic process","type":"narrow"},{"name":"negative regulation of low-density lipoprotein receptor breakdown","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor catabolism","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor degradation","type":"exact"}],"termid":"GO:0032804"}


id: GO:0098559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the early endosome membrane that faces the cytoplasm.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of endosome membrane","termid":"GO:0010009"},{"relation_name":"part_of","term_name":"early endosome membrane","termid":"GO:0031901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575","GO:0005768"],"is_obsolete":false,"name":"cytoplasmic side of early endosome membrane","synonyms":[{"name":"external leaflet of early endosome membrane","type":"exact"},{"name":"external side of early endosome membrane","type":"exact"}],"termid":"GO:0098559"}


id: MONDO:0009366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of compensated hydrocephalus characterized clinically by a slowly progressive gait disorder (see gait disorders, neurologic), progressive intellectual decline, and urinary incontinence. Spinal fluid pressure tends to be in the high normal range. This condition may result from processes which interfere with the absorption of csf including subarachnoid hemorrhage, chronic meningitis, and other conditions. (From Adams et al., Principles of Neurology, 6th ed, pp631-3)","definition_xrefs":["MESH:D006850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"communicating hydrocephalus","termid":"MONDO:0002045"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"normal pressure hydrocephalus","secondary_identifiers":["Orphanet:314928","ICD9:331.5","EFO:1001065","SCTID:30753002","DOID:1572","MedDRA:10029773","UMLS:C0020258","OMIM:236690","MEDGEN:42526"],"synonyms":[{"name":"NPH","type":"exact"},{"name":"chronic adult hydrocephalus","type":"exact"},{"name":"hydrocephalus, normal pressure, 1","type":"exact"},{"name":"hydrocephalus, normal-pressure","type":"related"},{"name":"low pressure hydrocephalus","type":"exact"}],"termid":"MONDO:0009366","xrefs":{"Monarch":{"xref_id":"0009366"}}}


id: GO:0003182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the coronary sinus valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve morphogenesis","termid":"GO:0003179"},{"relation_name":"part_of","term_name":"coronary sinus valve development","termid":"GO:0003178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary sinus valve morphogenesis","termid":"GO:0003182"}


id: PBO:0040226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 2","termid":"PBO:0040226"}


id: MONDO:0019155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in males that affects sexual development. It is characterized by underdevelopment of the Leydig cells, which are cells in the testes that secrete male sex hormones (androgens) and are important for male sexual development. Individuals with LCH have a typical male genetic make-up (46, XY), but due to lowered levels of androgens, may have a range of genital (reproductive organ) differences. Individuals with LCH may have a small penis (micropenis),the opening of the urethra may be located on the underside of the penis (hypospadias), or the scrotum may be divided into two halves (bifid scrotum). Given these differences in development, the external genitalia may not appear clearly male or female (ambiguous genitalia). Some individuals with LCH can have female external genitalia and small testes that have not descended and are located in the pelvis, abdomen, or groin. This may be referred to as type 1, whereas less severe cases might be called type 2. LCH is inherited in an autosomal recessive manner and is caused by mutations in the LHCGR gene.Although there is no specific treatment or cure for LCH, there may be ways to manage the symptoms. A team of doctors or specialists is often needed to figure out the treatment options for each person.","definition_xrefs":["GARD:0003244"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"male infertility","termid":"MONDO:0005372"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leydig cell hypoplasia","secondary_identifiers":["MedDRA:10024406","MEDGEN:449533","DOID:0112259","UMLS:C0860158","icd11.foundation:472787488","Orphanet:755","MESH:C562567","GARD:3244"],"synonyms":[{"name":"46,XY DSD due to LH resistance or LHB deficiency","type":"exact"},{"name":"46,XY DSD due to luteinizing hormone resistance or luteinizing hormone beta subunit deficiency","type":"exact"},{"name":"46,XY disorder of sex development due to LH defects","type":"related"},{"name":"46,XY disorder of sex development due to LH resistance or LHB deficiency","type":"exact"},{"name":"46,XY disorder of sex development due to luteinizing hormone resistance or luteinizing hormone beta subunit deficiency","type":"exact"},{"name":"LH resistance due to LH receptor deactivation","type":"related"},{"name":"Leydig cell agenesis","type":"related"},{"name":"Male hypergonadotropic hypogonadism due to LHCGR defect","type":"related"},{"name":"Male pseudohermaphroditism due to LH resistance or LHB deficiency","type":"exact"},{"name":"Male pseudohermaphroditism due to luteinizing hormone resistance or luteinizing hormone beta subunit deficiency","type":"exact"}],"termid":"MONDO:0019155","xrefs":{"Monarch":{"xref_id":"0019155"}}}


id: GO:0071298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an L-ascorbic acid (vitamin C) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to L-ascorbic acid","termid":"GO:0033591"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to monosaccharide stimulus","termid":"GO:0071326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-ascorbic acid","synonyms":[{"name":"cellular response to L-ascorbate","type":"exact"},{"name":"cellular response to ascorbic acid","type":"broad"},{"name":"cellular response to vitamin C","type":"exact"}],"termid":"GO:0071298"}


id: PBO:0082454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methyl sterol oxidase; catalyzes the first of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; mutants accumulate the sterol intermediate 4,4-dimethylzymosterol; human MSMO1 functionally complements the growth defect caused by repression of ERG25 expression","termid":"PBO:0082454"}


id: PBO:0091112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger, Sec23/Sec24-type","termid":"PBO:0091112"}


id: PBO:0079956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 7","termid":"PBO:0079956"}


id: PBO:0062826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress induced growth inhibitor 1","termid":"PBO:0062826"}


id: FYPO:0006029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin filament depolymerization, i.e. the removal of actin monomers from a filament, occurs to a lower extent than normal.","definition_xrefs":["PMID:11694585","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament organization during vegetative growth","termid":"FYPO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0004803"],"is_obsolete":false,"name":"decreased actin filament depolymerization","synonyms":[{"name":"decreased actin filament depolymerisation","type":"exact"},{"name":"decreased actin filament depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased actin filament depolymerization during vegetative growth","type":"exact"},{"name":"reduced actin filament depolymerization","type":"exact"}],"termid":"FYPO:0006029"}


id: PBO:0088281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase","termid":"PBO:0088281"}


id: PBO:0069782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1067, pseudogene","termid":"PBO:0069782"}


id: GO:0009386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Translational attenuation is a regulatory mechanism analogous to ribosome-mediated transcriptional attenuation. The system requires the presence of a short ORF, called a leader peptide, encoded in the mRNA upstream of the ribosome-binding site and start codon of the gene whose translation is to be regulated. Certain conditions, such as presence of the antibiotic tetracycline in bacteria or amino acid starvation, may cause slowing or stalling of the ribosome translating the leader peptide. The stalled ribosome masks a region of the mRNA and affects which of two alternative mRNA folded structures will form, therefore controlling whether or not a ribosome will bind and initiate translation of the downstream gene. Translational attenuation is analogous to ribosome-mediated transcriptional attenuation, in which mRNA remodeling caused by ribosome stalling regulates transcriptional termination rather than translational initiation.","definition_xrefs":["PMID:15805513","PMID:15694341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translational attenuation","termid":"GO:0009386"}


id: PATO:0000342
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000342 gametophyte compatible value (obsolete PATO:0000342)","termid":"PATO:0000342"}


id: FYPO:0005115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated and has an abnormal shape featuring a constriction at the center of the cell, corresponding to the cell division site. In some such cells, the diameter at the ends is much greater than in wild-type cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"elongated vegetative cell with central constriction","synonyms":[{"name":"cell morphology, elongated dumbbell","type":"related"},{"name":"cell morphology, long dumbbell","type":"related"},{"name":"elongated cell with central constriction during mitotic cell cycle","type":"related"},{"name":"elongated cell with central constriction during vegetative growth","type":"exact"},{"name":"elongated dumbbell morphology","type":"related"},{"name":"elongated dumbbell-shaped vegetative cell","type":"related"},{"name":"elongated swollen vegetative cell with constricted region at cell division site","type":"exact"}],"termid":"FYPO:0005115"}


id: PBO:0060025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 13","termid":"PBO:0060025"}


id: MONDO:0010608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hhhh syndrome","secondary_identifiers":["UMLS:C1844019","MEDGEN:336099","MESH:C564411","OMIM:306960"],"synonyms":[{"name":"Hhhh syndrome","type":"exact"},{"name":"hereditary Hemihypotrophy hemiparesis hemiathetosis syndrome","type":"related"}],"termid":"MONDO:0010608","xrefs":{"Monarch":{"xref_id":"0010608"}}}


id: SO:0000156
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cloning vector that is a hybrid of lambda phages and a plasmid that can be propagated as a plasmid or packaged as a phage,since they retain the lambda cos sites.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cosmid","secondary_identifiers":["http://en.wikipedia.org/wiki/Cosmid"],"synonyms":[{"name":"cosmid vector","type":"exact"}],"termid":"SO:0000156"}


id: MONDO:0002801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Functional obstruction of the colon leading to megacolon in the absence of obvious colonic diseases or mechanical obstruction. When this condition is acquired, acute, and coexisting with another medical condition (trauma, surgery, serious injuries or illness, or medication), it is called Ogilvie's syndrome.","definition_xrefs":["MESH:D003112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functional colonic disease","termid":"MONDO:0002802"},{"relation_name":"is_a","term_name":"intestinal pseudo-obstruction","termid":"MONDO:0002803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colonic pseudo-obstruction","secondary_identifiers":["SCTID:35065006","MEDGEN:3167","UMLS:C0009377","DOID:3876","ICD9:564.89"],"synonyms":[{"name":"ACPO","type":"related"},{"name":"Ogilvie's syndrome","type":"narrow"},{"name":"acute colonic ileus","type":"related"},{"name":"acute colonic pseudo-obstruction","type":"related"},{"name":"primary chronic pseudo-obstruction of colon","type":"exact"}],"termid":"MONDO:0002801","xrefs":{"Monarch":{"xref_id":"0002801"}}}


id: GO:0060731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process the increases the rate, frequency or extent of intestinal epithelial structure maintenance, a tissue homeostatic process required for the maintenance of the structure of the intestinal epithelium.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of intestinal epithelial structure maintenance","termid":"GO:0060730"},{"relation_name":"positively_regulates","term_name":"intestinal epithelial structure maintenance","termid":"GO:0060729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intestinal epithelial structure maintenance","termid":"GO:0060731"}


id: GO:0019248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-lactate from methylglyoxal, via the intermediate (R)-lactaldehyde.","definition_xrefs":["GOC:dph","GOC:go_curators","MetaCyc:MGLDLCTANA-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate biosynthetic process","termid":"GO:0019249"},{"relation_name":"is_a","term_name":"methylglyoxal catabolic process to lactate","termid":"GO:0061727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-lactate biosynthetic process from methylglyoxal via (R)-lactaldehyde","synonyms":[{"name":"D-lactate anabolism from methylglyoxal via (R)-lactaldehyde","type":"exact"},{"name":"D-lactate formation from methylglyoxal via (R)-lactaldehyde","type":"exact"},{"name":"D-lactate synthesis from methylglyoxal via (R)-lactaldehyde","type":"exact"}],"termid":"GO:0019248"}


id: GO:1903245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of adrenergic receptor signaling pathway involved in positive regulation of heart rate.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rl","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","PMID:17242280"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate (obsolete GO:1903245)","synonyms":[{"name":"regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"}],"termid":"GO:1903245"}


id: MONDO:0016278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Carcinosarcoma of the cervix uteri is a rare, malignant, mixed epithelial and mesenchymal tumor, located in the cervix uteri, composed of an admixture of carcinomatous and sarcomatous elements. It usually presents with abnormal vaginal bleeding and a round, well-defined, gray to yellowish-white, pedunculated polypoid mass protruding through the cervical canal. Association with HPV infection (especially serotype 16) has been frequently reported.","definition_xrefs":["Orphanet:213787"],"gene_count":0,"genotype_count":0,"name":"obsolete carcinosarcoma of the cervix uteri (obsolete MONDO:0016278)","termid":"MONDO:0016278","xrefs":{"Monarch":{"xref_id":"0016278"}}}


id: PBO:0047453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCHO2 divergent transcript","termid":"PBO:0047453"}


id: PBO:0057655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1247","termid":"PBO:0057655"}


id: PBO:0065999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALBP1 pseudogene 1","termid":"PBO:0065999"}


id: PBO:0079722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin domain containing 2","termid":"PBO:0079722"}


id: FYPO:0003986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of an amino acid measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered cellular amino acid level during vegetative growth","termid":"FYPO:0003984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular amino acid level","synonyms":[{"name":"increased cellular amino acid level during mitotic cell cycle","type":"related"},{"name":"increased cellular amino acid level during vegetative growth","type":"exact"}],"termid":"FYPO:0003986"}


id: GO:2000345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatocyte proliferation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"hepatocyte proliferation","termid":"GO:0072574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatocyte proliferation","termid":"GO:2000345"}


id: PBO:0054894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2308","termid":"PBO:0054894"}


id: GO:0061510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained to the new mitotic spindle pole body resulting in its being distributed asymmetrically.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric protein localization to old or new spindle pole body","termid":"GO:0061492"},{"relation_name":"is_a","term_name":"protein localization to mitotic spindle pole body","termid":"GO:1902440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"asymmetric protein localization to new mitotic spindle pole body","termid":"GO:0061510"}


id: GO:0035724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of CD24, a CD marker and cell adhesion molecule that occurs on many B-lineage cells and mature granulocytes, and is involved in B cell activation and differentiation as well as T cell co-stimulation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete CD24 biosynthetic process (obsolete GO:0035724)","synonyms":[{"name":"CD24 anabolism","type":"exact"},{"name":"CD24 biosynthesis","type":"exact"},{"name":"CD24 formation","type":"exact"},{"name":"CD24 synthesis","type":"exact"}],"termid":"GO:0035724"}


id: FYPO:0003676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which maturation of a precursor 5S ribosomal RNA (rRNA) molecule into a mature 5S rRNA molecule is abnormal.","definition_xrefs":["GO:0000481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"},{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal 5S RNA maturation","synonyms":[{"name":"abnormal 5S RNA maturation during mitotic cell cycle","type":"related"},{"name":"abnormal 5S RNA maturation during vegetative growth","type":"exact"},{"name":"abnormal 5S RNA processing","type":"exact"},{"name":"abnormal maturation of 5S rRNA","type":"exact"}],"termid":"FYPO:0003676"}


id: GO:1905763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MTREC complex.","definition_xrefs":["PMID:26942678","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MTREC complex binding","synonyms":[{"name":"Mtl1-Red1 core complex binding","type":"exact"},{"name":"NURS complex binding","type":"exact"},{"name":"PAXT complex binding","type":"exact"}],"termid":"GO:1905763"}


id: GO:1904514
data:
  {"annotated_genes":["SJAG_03720","SJAG_00364","SJAG_03438","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89402,102689,106936,116535],"is_not":false,"summary":null,"term":"GO:1904514"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of initiation of premeiotic DNA replication.","definition_xrefs":["PMID:25891897","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclear cell cycle DNA replication","termid":"GO:0010571"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication initiation","termid":"GO:0032298"},{"relation_name":"is_a","term_name":"regulation of initiation of premeiotic DNA replication","termid":"GO:1904512"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"meiotic DNA replication initiation","termid":"GO:1902974"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_03048":null,"SJAG_03438":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"positive regulation of initiation of premeiotic DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of initiation of meiotic DNA synthesis","type":"related"},{"name":"activation of initiation of premeiotic DNA replication","type":"narrow"},{"name":"activation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"activation of meiotic DNA replication initiation","type":"related"},{"name":"activation of premeiotic DNA replication initiation","type":"narrow"},{"name":"positive regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"positive regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"positive regulation of meiotic DNA replication initiation","type":"related"},{"name":"positive regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"up regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"up regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"up regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"up regulation of meiotic DNA replication initiation","type":"related"},{"name":"up regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"up-regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"up-regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"up-regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"up-regulation of meiotic DNA replication initiation","type":"related"},{"name":"up-regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"upregulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"upregulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"upregulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"upregulation of meiotic DNA replication initiation","type":"related"},{"name":"upregulation of premeiotic DNA replication initiation","type":"exact"}],"termid":"GO:1904514","terms_by_termid":{"GO:1904514":null}}


id: GO:0051986
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the attachment of spindle microtubules to the kinetochore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chromosome segregation","termid":"GO:0051985"},{"relation_name":"is_a","term_name":"regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051988"},{"relation_name":"negatively_regulates","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of attachment of spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"down-regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"downregulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"inhibition of attachment of spindle microtubules to kinetochore","type":"narrow"}],"termid":"GO:0051986","terms_by_termid":{"GO:1902424":null}}


