# terms

id: GO:0070158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling serine to seryl-tRNA in a mitochondrion, catalyzed by seryl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seryl-tRNA aminoacylation","termid":"GO:0006434"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0140053","GO:0008150","GO:0006399","GO:0010467","GO:0006520"],"is_obsolete":false,"name":"mitochondrial seryl-tRNA aminoacylation","termid":"GO:0070158"}


id: GO:2000523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell costimulation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"is_a","term_name":"regulation of leukocyte cell-cell adhesion","termid":"GO:1903037"},{"relation_name":"regulates","term_name":"T cell costimulation","termid":"GO:0031295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of T cell costimulation","synonyms":[{"name":"regulation of T cell co-stimulation","type":"exact"},{"name":"regulation of T lymphocyte costimulation","type":"exact"},{"name":"regulation of T-cell co-stimulation","type":"exact"},{"name":"regulation of T-cell costimulation","type":"exact"},{"name":"regulation of T-lymphocyte costimulation","type":"exact"}],"termid":"GO:2000523"}


id: SO:0001797
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat region found within the modular centromere.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:centromeric_repeat","type":"exact"},{"name":"centromeric repeat","type":"exact"}],"termid":"SO:0001797"}


id: GO:0000274
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the mitochondrial membrane-associated F0 proteins; is thought to prevent futile rotation of the catalytic core.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial proton-transporting ATP synthase, stator stalk (obsolete GO:0000274)","synonyms":[{"name":"mitochondrial proton-transporting ATP synthase, peripheral stalk","type":"exact"}],"termid":"GO:0000274"}


id: MONDO:0012476
data:
  {"annotated_genes":["SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85421],"is_not":false,"summary":null,"term":"MONDO:0012476"}]},"cv_name":"mondo","definition":"Autosomal spastic paraplegia type 30 (SPG30) is a form of hereditary spastic paraplegia characterized by either a pure spastic paraplegia phenotype, usually presenting in the first or second decade of life, with spastic lower extremities, usteady spastic gait, hyperreflexia and extensor plantar responses, or as a complicated phenotype with the additional manifestations of distal wasting, saccadic ocular movements, mild cerebellar ataxia and mild, distal, axonal neuropathy.","definition_xrefs":["Orphanet:101010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"},{"relation_name":"is_a","term_name":"KIF1A related neurological disorder","termid":"MONDO:0700055"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 30","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16942","MESH:C563677","SCTID:763377006","UMLS:C5235139","OMIM:610357","DOID:0110781","MEDGEN:1710020"],"synonyms":[{"name":"KIF1A hereditary spastic paraplegia","type":"exact"},{"name":"SPG30","type":"exact"},{"name":"autosomal recessive spastic paraplegia 30","type":"exact"},{"name":"autosomal spastic paraplegia type 30","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in KIF1A","type":"exact"},{"name":"hereditary spastic paraplegia type 30","type":"exact"},{"name":"spastic paraplegia 30, autosomal dominant","type":"exact"},{"name":"spastic paraplegia 30, autosomal recessive","type":"related"}],"termid":"MONDO:0012476","terms_by_termid":{"MONDO:0012476":null},"xrefs":{"Monarch":{"xref_id":"0012476"}}}


id: PBO:0087794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sumo-like domain protein; prevents accumulation of toxic intermediates during replication-associated recombinational repair; roles in silencing, lifespan, chromatid cohesion and the intra-S-phase DNA damage checkpoint; RENi family member","termid":"PBO:0087794"}


id: PBO:0109356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR choline and putative heme transporter 2","termid":"PBO:0109356"}


id: GO:0006488
data:
  {"annotated_genes":["SJAG_04954","SJAG_03311","SJAG_03656","SJAG_02102","SJAG_04952","SJAG_00924","SJAG_00394","SJAG_04363","SJAG_00747","SJAG_00437","SJAG_03764","SJAG_00334","SJAG_01950","SJAG_03056","SJAG_03774","SJAG_04821"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61695,63586,64577,65806,69411,73446,75334,77076,77573,80365,91468,94240,100107,100315,105325,111396],"is_not":false,"summary":null,"term":"GO:0006488"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichol-linked oligosaccharide, usually by a stepwise addition of glycosyl chains to endoplasmic reticulum membrane-bound dolichol-P.","definition_xrefs":["ISBN:0471331309","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"part_of","term_name":"protein N-linked glycosylation via asparagine","termid":"GO:0018279"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00747":null,"SJAG_00924":null,"SJAG_01950":null,"SJAG_02102":null,"SJAG_03056":null,"SJAG_03311":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_04363":null,"SJAG_04821":null,"SJAG_04952":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"dolichol-linked oligosaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446193"],"synonyms":[{"name":"N-linked glycan precursor biosynthesis","type":"exact"},{"name":"N-linked glycan precursor biosynthetic process","type":"exact"},{"name":"dolichol-linked oligosaccharide anabolism","type":"exact"},{"name":"dolichol-linked oligosaccharide biosynthesis","type":"exact"},{"name":"dolichol-linked oligosaccharide formation","type":"exact"},{"name":"dolichol-linked oligosaccharide synthesis","type":"exact"},{"name":"oligosaccharide-PP-dolichol assembly","type":"exact"}],"termid":"GO:0006488","terms_by_termid":{"GO:0006488":null}}


id: GO:1904260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of basement membrane assembly involved in embryonic body morphogenesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23940118","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of extracellular matrix assembly","termid":"GO:1901202"},{"relation_name":"is_a","term_name":"regulation of basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:1904259"},{"relation_name":"negatively_regulates","term_name":"basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:2001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of basement membrane assembly involved in embryonic body morphogenesis","synonyms":[{"name":"down regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"down-regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"downregulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"inhibition of basement membrane assembly involved in embryonic body morphogenesis","type":"narrow"}],"termid":"GO:1904260"}


id: MONDO:0013637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary biliary cholangitis","termid":"MONDO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0019303","MONDO:0002515"],"is_obsolete":false,"name":"primary biliary cholangitis 5","secondary_identifiers":["DOID:0070362","MEDGEN:481832","OMIM:614221","UMLS:C3280202","GARD:15777"],"synonyms":[{"name":"PBC5","type":"related"},{"name":"biliary cirrhosis, primary, 5","type":"related"}],"termid":"MONDO:0013637","xrefs":{"Monarch":{"xref_id":"0013637"}}}


id: MONDO:0020032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare urinary system benign neoplasm.","gene_count":0,"genotype_count":0,"name":"obsolete rare urinary tract tumor (obsolete MONDO:0020032)","secondary_identifiers":["Orphanet:98058"],"synonyms":[{"name":"rare urinary system neoplasm","type":"exact"},{"name":"rare urinary tract cancer","type":"exact"},{"name":"rare urinary tract neoplasm","type":"exact"}],"termid":"MONDO:0020032","xrefs":{"Monarch":{"xref_id":"0020032"}}}


id: MONDO:0011577
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85622,85623],"is_not":false,"summary":null,"term":"MONDO:0011577"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body myositis","termid":"MONDO:0007827"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, proximal, and ophthalmoplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1854106","DOID:0080719","MESH:C565311","OMIM:605637","MEDGEN:381340"],"synonyms":[{"name":"MYOPATHY, proximal, and ophthalmoplegia","type":"related"},{"name":"MYPOP","type":"related"},{"name":"inclusion body myopathy 3, autosomal dominant","type":"related"},{"name":"inclusion body myopathy 3, autosomal dominant, formerly","type":"related"},{"name":"myopathy with congenital joint contractures, ophthalmoplegia, and rimmed vacuoles","type":"related"},{"name":"myopathy, proximal, and ophthalmoplegia","type":"exact"},{"name":"proximal myopathy and ophthalmoplegia","type":"exact"}],"termid":"MONDO:0011577","terms_by_termid":{"MONDO:0011577":null},"xrefs":{"Monarch":{"xref_id":"0011577"}}}


id: PBO:0049405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 2A","termid":"PBO:0049405"}


id: MONDO:0010370
data:
  {"annotated_genes":["SJAG_01831"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87381],"is_not":false,"summary":null,"term":"MONDO:0010370"}]},"cv_name":"mondo","definition":"An X-linked inherited form of Cornelia De Lange syndrome caused by mutations in the SMC1A gene mapped to chromosome Xp11.22. Patients have a milder form of the syndrome compared to patients with the NIPBL gene mutation.","definition_xrefs":["NCIT:C75485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cornelia de Lange syndrome","termid":"MONDO:0016033"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01831":null},"genotype_count":0,"is_obsolete":false,"name":"Cornelia de Lange syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:315658","GARD:15259","DOID:0080506","OMIM:300590","UMLS:C1802395"],"synonyms":[{"name":"CDLS2","type":"related"},{"name":"Cdls, X-linked","type":"related"},{"name":"Cornelia DE Lange syndrome 2","type":"related"},{"name":"Cornelia De Lange syndrome type 2","type":"exact"},{"name":"Cornelia De Lange syndrome, X-linked","type":"related"},{"name":"Cornelia de Lange syndrome 2","type":"exact"},{"name":"Cornelia de Lange syndrome 2, X-linked dominant","type":"exact"},{"name":"Cornelia de Lange syndrome caused by mutation in SMC1A","type":"exact"},{"name":"SMC1A Cornelia de Lange syndrome","type":"exact"},{"name":"X-linked Cornelia De Lange syndrome","type":"exact"}],"termid":"MONDO:0010370","terms_by_termid":{"MONDO:0010370":null},"xrefs":{"Monarch":{"xref_id":"0010370"}}}


id: GO:0010714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of collagen metabolic process","termid":"GO:0010712"},{"relation_name":"positively_regulates","term_name":"collagen metabolic process","termid":"GO:0032963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collagen metabolic process","synonyms":[{"name":"positive regulation of collagen metabolism","type":"exact"}],"termid":"GO:0010714"}


id: PBO:0065891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB38, member RAS oncogene family","termid":"PBO:0065891"}


id: PBO:0059326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L58","termid":"PBO:0059326"}


id: PBO:0065439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 12","termid":"PBO:0065439"}


id: GO:0006037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving cell wall chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in the walls of cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall chitin metabolic process (obsolete GO:0006037)","synonyms":[{"name":"cell wall chitin metabolism","type":"exact"}],"termid":"GO:0006037"}


id: PBO:0057325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519e","termid":"PBO:0057325"}


id: MONDO:0006728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Inflammation of an intervertebral disk or disk space which may lead to disk erosion. Until recently, discitis has been defined as a nonbacterial inflammation and has been attributed to aseptic processes (e.g., chemical reaction to an injected substance). However, recent studies provide evidence that infection may be the initial cause, but perhaps not the promoter, of most cases of discitis. Discitis has been diagnosed in patients following discography, myelography, lumbar puncture, paravertebral injection, and obstetrical epidural anesthesia. Discitis following chemonucleolysis (especially with chymopapain) is attributed to chemical reaction by some and to introduction of microorganisms by others.","definition_xrefs":["MESH:D015299"],"gene_count":0,"genotype_count":0,"name":"obsolete discitis (obsolete MONDO:0006728)","secondary_identifiers":["ICD9:722.90","SCTID:2304001","DOID:10986"],"synonyms":[{"name":"inflammation of intervertebral disk","type":"exact"},{"name":"intervertebral disk inflammation","type":"exact"}],"termid":"MONDO:0006728","xrefs":{"Monarch":{"xref_id":"0006728"}}}


id: GO:1905852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of backward locomotion.","definition_xrefs":["PMID:11717360","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of locomotion","termid":"GO:0040017"},{"relation_name":"is_a","term_name":"regulation of backward locomotion","termid":"GO:0043058"},{"relation_name":"positively_regulates","term_name":"backward locomotion","termid":"GO:0043057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of backward locomotion","synonyms":[{"name":"activation of backward locomotion","type":"narrow"},{"name":"up regulation of backward locomotion","type":"exact"},{"name":"up-regulation of backward locomotion","type":"exact"},{"name":"upregulation of backward locomotion","type":"exact"}],"termid":"GO:1905852"}


id: MONDO:1012060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dermal allergy, non-human animal","termid":"MONDO:1011735"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermal allergy, horse","secondary_identifiers":["OMIA:000268-9796"],"termid":"MONDO:1012060","xrefs":{"Monarch":{"xref_id":"1012060"}}}


id: GO:0090664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or a multicellular organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a higher than normal number of multicellular organisms living per unit area.","definition_xrefs":["GOC:mr","PMID:26439857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to high population density","synonyms":[{"name":"response to crowding","type":"exact"}],"termid":"GO:0090664"}


id: PBO:0116301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the TTT complex and the telomere cap complex; subunit of the TTT Hsp90 cochaperone complex that is involved in chromatin remodeling and telomeric chromatin regulation, and  involved in chromatin remodeling and the telomere cap complex; DNA-binding protein specific to single-stranded yeast telomeric DNA repeats; required for telomere length regulation and telomere position effect; involved in the stability or biogenesis of PIKKs such as TORC1","termid":"PBO:0116301"}


id: PBO:0063342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEST containing nuclear protein pseudogene 2","termid":"PBO:0063342"}


id: FYPO:0003028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch localization is normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cortical patch localization","termid":"FYPO:0001294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal actin cortical patch localization during mitosis","synonyms":[{"name":"normal actin cortical patch location during mitosis","type":"related"},{"name":"normal actin patch localization during mitosis","type":"exact"},{"name":"normal F-actin patch localization during mitosis","type":"exact"},{"name":"normal actin cortical patch localisation during mitosis","type":"exact"},{"name":"normal actin cortical patch localization during mitosis during mitotic cell cycle","type":"related"},{"name":"normal actin cortical patch localization during mitosis during vegetative growth","type":"exact"},{"name":"normal actin cortical patch localization during mitotic M phase","type":"related"},{"name":"normal actin cortical patch localization during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0003028"}


id: MONDO:1040037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by autosomal recessive variants in the IMPG1 gene.","definition_xrefs":["PMID:28644393","PMID:23993198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"IMPG1-related recessive retinopathy","synonyms":[{"name":"IMPG1-related recessive retinopathy","type":"exact"}],"termid":"MONDO:1040037","xrefs":{"Monarch":{"xref_id":"1040037"}}}


id: GO:1902017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cilium assembly.","definition_xrefs":["GOC:dph","PMID:17719545","GOC:TermGenie","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of cilium assembly","synonyms":[{"name":"regulation of ciliogenesis","type":"exact"},{"name":"regulation of cilium biogenesis","type":"related"}],"termid":"GO:1902017"}


id: PBO:0071370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 29","termid":"PBO:0071370"}


id: MONDO:0100088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete late-onset familial alzheimer disease (obsolete MONDO:0100088)","termid":"MONDO:0100088","xrefs":{"Monarch":{"xref_id":"0100088"}}}


id: GO:0045559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of TRAIL-R2 (TNF-related apoptosis inducing ligand receptor 2), which engages a caspase-dependent apoptotic pathway and mediates apoptosis via the intracellular adaptor molecule FADD/MORT1.","definition_xrefs":["GOC:go_curators","PMID:9311998"],"gene_count":0,"genotype_count":0,"name":"obsolete TRAIL receptor 2 biosynthetic process (obsolete GO:0045559)","synonyms":[{"name":"TRAIL receptor 2 anabolism","type":"exact"},{"name":"TRAIL receptor 2 biosynthesis","type":"exact"},{"name":"TRAIL receptor 2 formation","type":"exact"},{"name":"TRAIL receptor 2 synthesis","type":"exact"},{"name":"tumor necrosis factor receptor superfamily member 10B biosynthetic process","type":"exact"}],"termid":"GO:0045559"}


id: PBO:0091301
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript retaining intron IV represents 15% of total mRNA","termid":"PBO:0091301"}


id: FYPO:0006563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which MBF complex assembly is abolished during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished MBF complex assembly during mitotic G1 phase","synonyms":[{"name":"MBF complex assembly abolished during mitotic G1 phase","type":"exact"},{"name":"abolished MBF complex assembly during G1 phase during vegetative growth","type":"exact"},{"name":"abolished MBF complex assembly during G1 phase of mitotic cell cycle","type":"exact"},{"name":"abolished MBF transcription complex assembly during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006563"}


id: MONDO:0019633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Relapsing fever is an infection caused by bacteria of the genus Borrelia, excluding those responsible for Lyme disease belonging to the Borrelia burgdorferi complex.","definition_xrefs":["Orphanet:91547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Borrelia infectious disease","termid":"MONDO:0006681"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relapsing fever","secondary_identifiers":["SCTID:420079008","ICD9:087.9","MEDGEN:48397","ICD9:087","MedDRA:10038300","MESH:D012061","ICD10CM:A68","UMLS:C0035021","GARD:19171","DOID:13034","icd11.foundation:965498095"],"termid":"MONDO:0019633","xrefs":{"Monarch":{"xref_id":"0019633"}}}


id: MONDO:1012082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tetragametic chimerism, non-human animal","termid":"MONDO:1011918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism, water buffalo","secondary_identifiers":["OMIA:000393-89462"],"termid":"MONDO:1012082","xrefs":{"Monarch":{"xref_id":"1012082"}}}


id: PR:O94537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ire1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.01","synonyms":[{"name":"Spom972h-ire1","type":"exact"}],"termid":"PR:O94537"}


id: FYPO:0000403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the duration of progression through the G2/M transition of the mitotic cell cycle is increased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased duration of mitotic G2/M phase transition (obsolete FYPO:0000403)","synonyms":[{"name":"cell cycle progression through the G2/M phase transition: increased duration","type":"related"},{"name":"increased duration of cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"increased duration of mitotic G2/M phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000403"}


id: FYPO:0008236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An RNA localization phenotype where the loading of siRNAs onto the RITs complex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA localization to chromatin","termid":"FYPO:0003059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal siRNA loading onto RITS complex","termid":"FYPO:0008236"}


id: PBO:0057641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1233-1","termid":"PBO:0057641"}


id: GO:1901206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of a cardiac adrenergic receptor signaling pathway.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adrenergic receptor signaling pathway involved in heart process (obsolete GO:1901206)","synonyms":[{"name":"activation of adrenergic receptor signaling pathway involved in heart process","type":"narrow"},{"name":"activation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"activation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"positive regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"positive regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"up regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"up regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"up-regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"up-regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"upregulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"upregulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:1901206"}


id: PBO:0043485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cannabinoid receptor interacting protein 1","termid":"PBO:0043485"}


id: PBO:0013766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin capping protein beta subunit Acp2","termid":"PBO:0013766"}


id: GO:0072137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a condensed mesenchymal cell population. A condensed mesenchymal cell population is a population of adherent mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"condensed mesenchymal cell proliferation","termid":"GO:0072137"}


id: PR:Q03392
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proliferating cell nuclear antigen that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03781","PANTHER:PTHR11352:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.09","secondary_identifiers":["UniProtKB:Q03392"],"synonyms":[{"name":"PCNA (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PCNA","type":"exact"}],"termid":"PR:Q03392"}


id: PBO:0050156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 12","termid":"PBO:0050156"}


id: GO:0120184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a focal adhesion into its constituent components.","definition_xrefs":["PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of focal adhesion disassembly","termid":"GO:0120182"},{"relation_name":"is_a","term_name":"negative regulation of cell-substrate junction organization","termid":"GO:0150118"},{"relation_name":"negatively_regulates","term_name":"focal adhesion disassembly","termid":"GO:0120181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of focal adhesion disassembly","termid":"GO:0120184"}


id: PBO:0059603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 15","termid":"PBO:0059603"}


id: PBO:0090603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-5'-phosphatase","termid":"PBO:0090603"}


id: MONDO:0013459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta in which the cause of the disease is a mutation in the SERPINH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 10","secondary_identifiers":["GARD:12874","MEDGEN:462561","OMIM:613848","DOID:0110346","UMLS:C3151211"],"synonyms":[{"name":"OI type 10","type":"related"},{"name":"OI type X","type":"related"},{"name":"OI, type 10","type":"related"},{"name":"OI10","type":"exact"},{"name":"SERPINH1 osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta caused by mutation in SERPINH1","type":"exact"},{"name":"osteogenesis imperfecta type X","type":"exact"},{"name":"osteogenesis imperfecta, type 10","type":"related"},{"name":"osteogenesis imperfecta, type X","type":"related"}],"termid":"MONDO:0013459","xrefs":{"Monarch":{"xref_id":"0013459"}}}


id: SO:0001327
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2prime_O_methylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methylguanosine","secondary_identifiers":["RNAMOD:032"],"synonyms":[{"name":"2'-O-methylguanosine","type":"exact"},{"name":"Gm","type":"exact"},{"name":"two prime O methylguanosine","type":"exact"}],"termid":"SO:0001327"}


id: PBO:0053608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 641","termid":"PBO:0053608"}


id: PBO:0045193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 6","termid":"PBO:0045193"}


id: PBO:0002877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Sec74 (predicted)","termid":"PBO:0002877"}


id: PBO:0083761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential kinetochore protein; component of the CBF3 complex that binds the CDEIII region of the centromere; contains an N-terminal Zn2Cys6 type zinc finger domain, a C-terminal acidic domain, and a putative coiled coil dimerization domain","termid":"PBO:0083761"}


id: MONDO:0007613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fibromuscular dysplasia of arteries (obsolete MONDO:0007613)","termid":"MONDO:0007613","xrefs":{"Monarch":{"xref_id":"0007613"}}}


id: PBO:0049528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2AZ2 divergent transcript","termid":"PBO:0049528"}


id: PBO:0076853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tet methylcytosine dioxygenase 1","termid":"PBO:0076853"}


id: PBO:0003639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-TEFb-associated cyclin-dependent protein kinase Cdk9","termid":"PBO:0003639"}


id: PR:Q08I43
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3'-5' exoribonuclease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exonuclease eri1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.08","secondary_identifiers":["UniProtKB:Q08I43"],"synonyms":[{"name":"Spom972h-ERI1","type":"exact"},{"name":"enhanced RNAi protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q08I43"}


id: GO:0019390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of glucuronosides, compound composed of a hydroxy compound linked to a glucuronate residue.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete glucuronoside biosynthetic process (obsolete GO:0019390)","synonyms":[{"name":"glucuronide biosynthesis","type":"exact"},{"name":"glucuronide biosynthetic process","type":"exact"},{"name":"glucuronoside anabolism","type":"exact"},{"name":"glucuronoside biosynthesis","type":"exact"},{"name":"glucuronoside formation","type":"exact"},{"name":"glucuronoside synthesis","type":"exact"}],"termid":"GO:0019390"}


id: PBO:0045807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonic ectoderm development","termid":"PBO:0045807"}


id: MONDO:0018446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025","MONDO:0005027"],"is_obsolete":false,"name":"autosomal recessive cerebellar ataxia - epilepsy - intellectual disability syndrome","secondary_identifiers":["MEDGEN:1843349","Orphanet:404481","UMLS:C5681145","GARD:21719"],"termid":"MONDO:0018446","xrefs":{"Monarch":{"xref_id":"0018446"}}}


id: SO:0002125
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A joining gene that rearranges at the DNA level and codes the joining region of the variable domain of an immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_J_gene","synonyms":[{"name":"IG_joining_gene","type":"exact"},{"name":"Immunoglobulin_Joining_Gene","type":"exact"},{"name":"immunoglobulin_J_gene","type":"exact"}],"termid":"SO:0002125"}


id: GO:0110074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apical constriction involved in ventral furrow formation.","definition_xrefs":["GOC:ha","PMID:28495958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apical constriction involved in ventral furrow formation","termid":"GO:0110073"},{"relation_name":"is_a","term_name":"positive regulation of actin filament-based movement","termid":"GO:1903116"},{"relation_name":"positively_regulates","term_name":"apical constriction involved in ventral furrow formation","termid":"GO:0110072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apical constriction involved in ventral furrow formation","termid":"GO:0110074"}


id: PBO:0042492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 13","termid":"PBO:0042492"}


id: GO:0045956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion-dependent exocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"},{"relation_name":"is_a","term_name":"positive regulation of regulated secretory pathway","termid":"GO:1903307"},{"relation_name":"positively_regulates","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of calcium ion-dependent exocytosis","synonyms":[{"name":"activation of calcium ion-dependent exocytosis","type":"narrow"},{"name":"stimulation of calcium ion-dependent exocytosis","type":"narrow"},{"name":"up regulation of calcium ion-dependent exocytosis","type":"exact"},{"name":"up-regulation of calcium ion-dependent exocytosis","type":"exact"},{"name":"upregulation of calcium ion-dependent exocytosis","type":"exact"}],"termid":"GO:0045956"}


id: PBO:0004231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bouquet formation protein Bqt4","termid":"PBO:0004231"}


id: PBO:0064841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 12B pseudogene 1","termid":"PBO:0064841"}


id: PBO:0000958
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.3.5","termid":"PBO:0000958"}


id: PBO:0086536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; partially overlaps the verified ORF RSF2","termid":"PBO:0086536"}


id: GO:0090695
data:
  {"annotated_genes":["SJAG_04508","SJAG_02606"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88209,110858],"is_not":false,"summary":null,"term":"GO:0090695"}]},"cv_name":"cellular_component","definition":"A eukaryotically conserved heterodimeric protein complex (comprising Wings apart-like protein and the Pds5 Armadillo repeat cohesin associated protein) involved in the loading and unloading of a cohesin complex onto DNA.","definition_xrefs":["GOC:vw","PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMC loading complex","termid":"GO:0032116"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02606":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Wpl/Pds5 cohesin loading/unloading complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090695","terms_by_termid":{"GO:0090695":null}}


id: PBO:0116393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mug2/mug135/meu2 family protein","termid":"PBO:0116393"}


id: PBO:0084167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved subunit of the mitochondrial pyruvate carrier (MPC); expressed during growth on fermentable carbon sources, and heterodimerizes with Mpc1p to form the fermentative isoform of MPC; MPC localizes to the mitochondrial inner membrane and mediates pyruvate uptake; MPC2 paralog, MPC3, heterodimerizes with Mpc1p to form the respiratory MPC isoform","termid":"PBO:0084167"}


id: PBO:0029978
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_export_from_nucleus","termid":"PBO:0029978"}


id: PBO:0045504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSP antisense RNA 1","termid":"PBO:0045504"}


id: GO:1901970
data:
  {"annotated_genes":["SJAG_05236","SJAG_01297","SJAG_03681","SJAG_01805","SJAG_02380","SJAG_02169","SJAG_03351","SJAG_00666","SJAG_00883","SJAG_03350","SJAG_01679","SJAG_02336","SJAG_01837","SJAG_03353","SJAG_03048","SJAG_03126","SJAG_02451","SJAG_04573","SJAG_04259","SJAG_02498","SJAG_04968"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96932,99927,99932],"is_not":false,"summary":null,"term":"GO:1901970"},{"annotations":[99912,108563,114086,91063,114574,104208,112268,116202,107544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[94538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[115073,94146,98022,102424,102695,111683,100461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[116978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905824"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic sister chromatid separation.","definition_xrefs":["GOC:TermGenie","PMID:1846086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid separation","termid":"GO:0010965"},{"relation_name":"is_a","term_name":"positive regulation of chromosome separation","termid":"GO:1905820"},{"relation_name":"positively_regulates","term_name":"mitotic sister chromatid separation","termid":"GO:0051306"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04968":null,"SJAG_05236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic sister chromatid separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of chromosome separation during mitosis","type":"related"},{"name":"activation of mitotic chromosome separation","type":"related"},{"name":"activation of mitotic sister chromatid resolution","type":"exact"},{"name":"activation of mitotic sister chromatid separation","type":"narrow"},{"name":"activation of sister chromatid separation during mitosis","type":"exact"},{"name":"positive regulation of chromosome separation during mitosis","type":"related"},{"name":"positive regulation of mitotic chromosome separation","type":"related"},{"name":"positive regulation of mitotic sister chromatid resolution","type":"exact"},{"name":"positive regulation of sister chromatid separation during mitosis","type":"exact"},{"name":"up regulation of chromosome separation during mitosis","type":"related"},{"name":"up regulation of mitotic chromosome separation","type":"related"},{"name":"up regulation of mitotic sister chromatid resolution","type":"exact"},{"name":"up regulation of mitotic sister chromatid separation","type":"exact"},{"name":"up regulation of sister chromatid separation during mitosis","type":"exact"},{"name":"up-regulation of chromosome separation during mitosis","type":"related"},{"name":"up-regulation of mitotic chromosome separation","type":"related"},{"name":"up-regulation of mitotic sister chromatid resolution","type":"exact"},{"name":"up-regulation of mitotic sister chromatid separation","type":"exact"},{"name":"up-regulation of sister chromatid separation during mitosis","type":"exact"},{"name":"upregulation of chromosome separation during mitosis","type":"related"},{"name":"upregulation of mitotic chromosome separation","type":"related"},{"name":"upregulation of mitotic sister chromatid resolution","type":"exact"},{"name":"upregulation of mitotic sister chromatid separation","type":"exact"},{"name":"upregulation of sister chromatid separation during mitosis","type":"exact"}],"termid":"GO:1901970","terms_by_termid":{"GO:0045842":null,"GO:0140499":null,"GO:1901970":null,"GO:1902426":null,"GO:1905824":null}}


id: PR:Q9UT07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PRELI domain-containing protein 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11158:SF16","PRO:DNx","OMA:SCHPO02214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ups1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.10","secondary_identifiers":["UniProtKB:Q9UT07"],"synonyms":[{"name":"Spom972h-PRELID1","type":"exact"}],"termid":"PR:Q9UT07"}


id: PBO:0083835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily conserved 19S regulatory particle assembly-chaperone; involved in the assembly of the base subcomplex of the 19S proteasomal regulatory particle (RP); involved in DNA mismatch repair during slow growth; weak similarity to Msh1p; structural study suggests Hsm3p is a scaffold protein for Rpt1p-Rpt2p complex formation; ortholog of human 19S subunit S5b","termid":"PBO:0083835"}


id: GO:1903672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sprouting angiogenesis.","definition_xrefs":["GOC:TermGenie","PMID:16756958","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of angiogenesis","termid":"GO:0045766"},{"relation_name":"is_a","term_name":"regulation of sprouting angiogenesis","termid":"GO:1903670"},{"relation_name":"positively_regulates","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sprouting angiogenesis","synonyms":[{"name":"activation of sprouting angiogenesis","type":"narrow"},{"name":"up regulation of sprouting angiogenesis","type":"exact"},{"name":"up-regulation of sprouting angiogenesis","type":"exact"},{"name":"upregulation of sprouting angiogenesis","type":"exact"}],"termid":"GO:1903672"}


id: FYPO:0002118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a specified transporter activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0005447","FYPO:0002114","FYPO:0000652","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased transporter activity","synonyms":[{"name":"reduced transporter activity","type":"exact"}],"termid":"FYPO:0002118"}


id: GO:0052607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 7-hydroxychlorophyllide a + NADPH + O2 + H+ = chlorophyllide b + NADP+ + 2 H2O.","definition_xrefs":["MetaCyc:RXN-7677"],"gene_count":0,"genotype_count":0,"name":"obsolete 7-hydroxy-chlorophyllide a oxygenase activity (obsolete GO:0052607)","synonyms":[{"name":"chlorophyll b synthetase activity","type":"exact"}],"termid":"GO:0052607"}


id: PBO:0046381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF domain specific O-linked N-acetylglucosamine transferase","termid":"PBO:0046381"}


id: MONDO:0022208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystal arthropathy","secondary_identifiers":["UMLS:C0152087","ICD9:712","MEDGEN:508879","SCTID:18834007","ICD9:712.88","ICD9:712.98","ICD9:712.90","ICD9:712.80"],"synonyms":[{"name":"Arthritides, Crystal","type":"related"},{"name":"Arthritides, Crystalline","type":"related"},{"name":"Arthritis, Crystal","type":"related"},{"name":"Arthritis, Crystalline","type":"related"},{"name":"Arthropathies, Crystal","type":"related"},{"name":"Arthropathies, Crystalline","type":"related"},{"name":"Arthropathy, Crystal","type":"related"},{"name":"Arthropathy, Crystalline","type":"related"},{"name":"Crystal Arthritides","type":"related"},{"name":"Crystal Arthritis","type":"related"},{"name":"Crystal Arthropathies","type":"related"},{"name":"Crystal Arthropathy","type":"related"},{"name":"Crystal arthropathy","type":"related"},{"name":"Crystal-induced arthritis AND/OR synovitis","type":"related"},{"name":"Crystal-related arthropathy and periarthropathy","type":"related"},{"name":"Crystalline Arthritides","type":"related"},{"name":"Crystalline Arthritis","type":"related"},{"name":"Crystalline Arthropathies","type":"related"},{"name":"Crystalline Arthropathy","type":"related"},{"name":"Crystalline arthritis","type":"related"},{"name":"crystal arthropathy","type":"exact"},{"name":"crystal-induced arthritis and/or synovitis","type":"related"},{"name":"crystal-related arthropathy and periarthropathy","type":"related"},{"name":"crystalline arthritis","type":"related"}],"termid":"MONDO:0022208","xrefs":{"Monarch":{"xref_id":"0022208"}}}


id: PR:O14072
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A manganese-transporting ATPase 13A1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01219","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese-transporting ATPase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.07c","secondary_identifiers":["UniProtKB:O14072"],"synonyms":[{"name":"Spom972h-ATP13A1","type":"exact"}],"termid":"PR:O14072"}


id: GO:0097672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Pof5 in S. pombe (YDR306C in S. cerevisiae).","definition_xrefs":["PMID:14747994","GOC:vw","GOC:jd","PMID:15147268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Pof5 ubiquitin ligase complex","synonyms":[{"name":"SCF-YDR306C ubiquitin ligase complex","type":"related"}],"termid":"GO:0097672"}


id: PBO:0091630
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteomics data indicates an N-terminally extended version of this gene which would contain an upstream stop codon and a frameshift","termid":"PBO:0091630"}


id: GO:0032693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-10 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-10 production","termid":"GO:0032653"},{"relation_name":"negatively_regulates","term_name":"interleukin-10 production","termid":"GO:0032613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-10 production","secondary_identifiers":["GO:0045081","GO:2001180"],"synonyms":[{"name":"down regulation of interleukin-10 production","type":"exact"},{"name":"down-regulation of interleukin-10 production","type":"exact"},{"name":"downregulation of interleukin-10 production","type":"exact"},{"name":"inhibition of interleukin-10 production","type":"narrow"},{"name":"negative regulation of IL-10 production","type":"exact"},{"name":"negative regulation of interleukin-10 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-10 secretion","type":"narrow"}],"termid":"GO:0032693"}


id: PBO:0069163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 415, pseudogene","termid":"PBO:0069163"}


id: GO:1900854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of terrequinone A biosynthetic process.","definition_xrefs":["PMID:24066102","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"positively_regulates","term_name":"terrequinone A biosynthetic process","termid":"GO:1900796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of terrequinone A biosynthetic process","secondary_identifiers":["GO:1900852"],"synonyms":[{"name":"regulation of terrequinone A biosynthetic process","type":"broad"},{"name":"up regulation of terrequinone A biosynthetic process","type":"exact"},{"name":"up-regulation of terrequinone A biosynthetic process","type":"exact"},{"name":"upregulation of terrequinone A biosynthetic process","type":"exact"}],"termid":"GO:1900854"}


id: PBO:0049201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIK1 antisense RNA 2","termid":"PBO:0049201"}


id: SO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Intronic 2 bp region bordering exon. A splice_site that adjacent_to exon and overlaps intron.","definition_xrefs":["SO:cjm","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site","termid":"SO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis_splice_site","synonyms":[{"name":"cis splice site","type":"exact"}],"termid":"SO:0001419"}


id: PBO:0090462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer beta subunit","termid":"PBO:0090462"}


id: MONDO:0014228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fuchs' endothelial dystrophy in which the cause of the disease is a mutation in the AGBL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fuchs' endothelial dystrophy","termid":"MONDO:0005321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal dystrophy, Fuchs endothelial, 8","secondary_identifiers":["UMLS:C3809798","OMIM:615523","GARD:18223","MEDGEN:816128"],"synonyms":[{"name":"AGBL1 Fuchs' endothelial dystrophy","type":"exact"},{"name":"FECD8","type":"related"},{"name":"Fuchs' endothelial dystrophy caused by mutation in AGBL1","type":"exact"},{"name":"corneal dystrophy, Fuchs endothelial, 8","type":"exact"},{"name":"corneal dystrophy, Fuchs endothelial, type 8","type":"exact"}],"termid":"MONDO:0014228","xrefs":{"Monarch":{"xref_id":"0014228"}}}


id: PBO:0085441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polypeptide release factor (eRF1) in translation termination; mutant form acts as a recessive omnipotent suppressor; methylated by Mtq2p-Trm112p in ternary complex eRF1-eRF3-GTP; mutation of methylation site confers resistance to zymocin; has a role in cytokinesis through interaction with Mlc1p","termid":"PBO:0085441"}


id: GO:0002316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell in the spleen acquires the specialized features of a follicular B cell. Follicular B cells are major population of mature recirculating B cells in the spleen and are located in the B-cell follicle region.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature B cell differentiation involved in immune response","termid":"GO:0002313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular B cell differentiation","synonyms":[{"name":"follicular B cell development","type":"related"},{"name":"follicular B lymphocyte differentiation","type":"exact"},{"name":"follicular B-cell differentiation","type":"exact"},{"name":"follicular B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002316"}


id: FYPO:0004534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ascospore release from an ascus begins earlier than normal.","definition_xrefs":["GO:0071998","PMID:16751704","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"premature ascospore release from ascus","synonyms":[{"name":"accelerated ascospore release from ascus","type":"related"},{"name":"advanced ascospore release from ascus","type":"exact"}],"termid":"FYPO:0004534"}


id: SO:0002273
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Elements of the LINE I superfamily are similar to the Jockey and L1 superfamily. They contains two ORFs, the.second of which includes  Apurinic endonuclease (APE) and  reverse transcriptase (RT). The I superfamily encodes an RH (RNase H) domain downstream of the RT domain.","direct_ancestors":[{"relation_name":"is_a","term_name":"LINE_element","termid":"SO:0000194"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I_LINE_retrotransposon","secondary_identifiers":["https://www.sciencedirect.com/topics/biochemistry-genetics-and-molecular-biology/long-interspersed-nuclear-element"],"synonyms":[{"name":"I LINE retrotransposon","type":"exact"},{"name":"LINE I element","type":"exact"},{"name":"RII retrotransposon","type":"exact"}],"termid":"SO:0002273"}


id: PBO:0057338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 524","termid":"PBO:0057338"}


id: GO:0090074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of protein homodimerization activity","termid":"GO:0043496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein homodimerization activity","termid":"GO:0090074"}


id: PBO:0076420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9 pseudogene 1","termid":"PBO:0076420"}


id: FYPO:0008139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the endoplasmic reticulum lumen is larger than normal.","definition_xrefs":["PMID:11839792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum morphology","termid":"FYPO:0000354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"dilated endoplasmic reticulum lumen","synonyms":[{"name":"dialted ER lumen","type":"exact"}],"termid":"FYPO:0008139"}


id: PBO:0058514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5702","termid":"PBO:0058514"}


id: PBO:0036009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_vegetative_growth","termid":"PBO:0036009"}


id: GO:0004242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-mitochondrial processing peptidase (obsolete GO:0004242)","synonyms":[{"name":"beta-MPP","type":"exact"},{"name":"beta-mitochondrial processing peptidase","type":"exact"}],"termid":"GO:0004242"}


id: PBO:0005885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b, Cob1 (predicted)","termid":"PBO:0005885"}


id: MONDO:0008794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anhidrosis","termid":"MONDO:0006527"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"anhidrosis, familial generalized, with abnormal or absent sweat glands","secondary_identifiers":["OMIM:206600","UMLS:C4225670","MEDGEN:895862"],"synonyms":[{"name":"anhidrosis, familial generalized, with abnormal or absent sweat glands","type":"exact"}],"termid":"MONDO:0008794","xrefs":{"Monarch":{"xref_id":"0008794"}}}


id: GO:1900661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of emericellamide A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of emericellamide biosynthetic process","termid":"GO:1900658"},{"relation_name":"regulates","term_name":"emericellamide A biosynthetic process","termid":"GO:1900617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748","GO:0006629"],"is_obsolete":false,"name":"regulation of emericellamide A biosynthetic process","synonyms":[{"name":"regulation of emericellamide A anabolism","type":"exact"},{"name":"regulation of emericellamide A biosynthesis","type":"exact"},{"name":"regulation of emericellamide A formation","type":"exact"},{"name":"regulation of emericellamide A synthesis","type":"exact"}],"termid":"GO:1900661"}


id: PBO:0116395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene, mug2/mug135/meu2 family","termid":"PBO:0116395"}


id: PBO:0064129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKIA antisense RNA 1","termid":"PBO:0064129"}


id: GO:0039532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the series of a cytoplasmic pattern recognition receptor signaling pathway.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","synonyms":[{"name":"negative regulation of MAVS signaling","type":"related"},{"name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway in response to virus","type":"narrow"},{"name":"negative regulation of cytosolic pattern recognition receptor signaling pathway","type":"exact"},{"name":"negative regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway","type":"narrow"},{"name":"negative regulation of viral-induced cytoplasmic pattern recognition receptor signalling pathway","type":"narrow"}],"termid":"GO:0039532"}


id: PR:O94487
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk35 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.06c","synonyms":[{"name":"Spom972h-mug27","type":"exact"},{"name":"meiotically up-regulated gene 27 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94487"}


id: MONDO:0014110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the MIP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 15 multiple types","secondary_identifiers":["MEDGEN:815331","UMLS:C3809001","OMIM:615274","DOID:0110251"],"synonyms":[{"name":"CTRCT15","type":"exact"},{"name":"MIP early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 15, multiple types","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in MIP","type":"exact"}],"termid":"MONDO:0014110","xrefs":{"Monarch":{"xref_id":"0014110"}}}


id: PBO:0045369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 3 pseudogene 2","termid":"PBO:0045369"}


id: GO:0102757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H2O = NADH + hydrogenphosphate.","definition_xrefs":["GOC:pz","RHEA:60664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"NADPH phosphatase activity","secondary_identifiers":["MetaCyc:RXN-7703"],"termid":"GO:0102757"}


id: GO:0019629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propionate that occurs in the 2-methylcitrate cycle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate catabolic process","termid":"GO:0019543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"propionate catabolic process, 2-methylcitrate cycle","synonyms":[{"name":"propionate breakdown, 2-methylcitrate cycle","type":"exact"},{"name":"propionate degradation, 2-methylcitrate cycle","type":"exact"}],"termid":"GO:0019629"}


id: MONDO:0007624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Flynn-Aird syndrome is a neuroectodermal disorder involving the nervous, cutaneous, skeletal, and glandular systems. It has been described in 10 members from five generations of one family. Clinical manifestations include eye abnormalities (cataracts, retinitis pigmentosa, and myopia), sensorineural deafness, ataxia, peripheral neuritis, epilepsy, dementia, skin atrophy and striking dental caries. Patients also present with muscle wasting, joint stiffness and bone cysts. Flynn-Aird syndrome is transmitted as an autosomal dominant trait. It shows some similarities to the syndromes of Werner, Refsum and Cockayne.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic nervous system disorder (obsolete MONDO:0019117)","termid":"MONDO:0019117"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"premature aging syndrome","termid":"MONDO:0019303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019303"],"is_obsolete":false,"name":"Flynn-Aird syndrome","secondary_identifiers":["MEDGEN:91009","OMIM:136300","SCTID:239056006","MESH:C537066","Orphanet:2047","UMLS:C0343108","GARD:2347"],"synonyms":[{"name":"Flynn Aird syndrome","type":"related"},{"name":"Flynn-Aird syndrome","type":"exact"},{"name":"cataracts, retinitis pigmentosa, sensorineural hearing loss, ataxia, peripheral neuritis, epilepsy, dementia, skin atrophy, chronic ulceration, dental","type":"related"}],"termid":"MONDO:0007624","xrefs":{"Monarch":{"xref_id":"0007624"}}}


id: PBO:0011167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamideformyltransferase","termid":"PBO:0011167"}


id: MONDO:0100515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A familial congenital mirror movement disorder where individuals with heterozygous variants in DCC have congenital mirror movements and/or agenesis of the corpus callosum (not with or without- some individuals do not demonstrate mirror movements and only have corpus callosum defects, even within the same family).","direct_ancestors":[{"relation_name":"is_a","term_name":"familial congenital mirror movements","termid":"MONDO:0016558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"mirror movements 1 and/or agenesis of the corpus callosum","termid":"MONDO:0100515","xrefs":{"Monarch":{"xref_id":"0100515"}}}


id: GO:0046612
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The V1 domain of a proton-transporting V-type ATPase found in the lysosomal membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar proton-transporting V-type ATPase, V1 domain","termid":"GO:0000221"},{"relation_name":"part_of","term_name":"lysosomal proton-transporting V-type ATPase complex","termid":"GO:0046611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"lysosomal proton-transporting V-type ATPase, V1 domain","synonyms":[{"name":"lysosomal hydrogen ion-transporting ATPase V1 domain","type":"exact"}],"termid":"GO:0046612"}


id: PATO:0002335
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being dome-shaped.","definition_xrefs":["PATOC:dd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tholiform","termid":"PATO:0002335"}


id: PBO:0005142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger containing protein Phf1","termid":"PBO:0005142"}


id: MONDO:0013207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Fuchs' endothelial dystrophy","termid":"MONDO:0005321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal dystrophy, fuchs endothelial, 7","secondary_identifiers":["GARD:18222","OMIM:613271","UMLS:C2750447","MEDGEN:413849","MESH:C567674"],"synonyms":[{"name":"FECD7","type":"exact"},{"name":"Fcd4 locus","type":"related"},{"name":"corneal dystrophy, Fuchs endothelial, 7","type":"related"},{"name":"corneal dystrophy, Fuchs endothelial, late-onset","type":"related"}],"termid":"MONDO:0013207","xrefs":{"Monarch":{"xref_id":"0013207"}}}


id: PBO:0076455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin 2 pseudogene 1","termid":"PBO:0076455"}


id: FYPO:0006294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation. Macroautophagy is the major pathway by which cells digest parts of their own cytoplasm.","definition_xrefs":["GO:0016236","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype","termid":"FYPO:0000140"},{"relation_name":"is_a","term_name":"normal macroautophagy","termid":"FYPO:0000385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal macroautophagy during nitrogen starvation","synonyms":[{"name":"normal macroautophagy during cellular response to nitrogen starvation","type":"exact"},{"name":"normal macroautophagy during nitrogen depletion","type":"exact"},{"name":"normal macroautophagy during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0006294"}


id: PBO:0072112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 1","termid":"PBO:0072112"}


id: GO:0032451
data:
  {"annotated_genes":["SJAG_03997","SJAG_03750","SJAG_03286","SJAG_03041","SJAG_03635","SJAG_02401","SJAG_00892","SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70771,87734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[67190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[70544,75276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[70766,118060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032454"},{"annotations":[94424,103545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"},{"annotations":[88818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008398"},{"annotations":[103413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a substrate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity","termid":"GO:0003824"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00892":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03750":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674"],"is_obsolete":false,"name":"demethylase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032451","terms_by_termid":{"GO:0008398":null,"GO:0032454":null,"GO:0034647":null,"GO:0051864":null,"GO:0140680":null,"GO:0140683":null,"GO:1990984":null}}


id: PBO:0059010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MME antisense RNA 1","termid":"PBO:0059010"}


id: GO:0019861
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium.","definition_xrefs":["UniProtKB-KW:KW-0282"],"gene_count":0,"genotype_count":0,"name":"obsolete flagellum (obsolete GO:0019861)","secondary_identifiers":["Wikipedia:Flagellum"],"synonyms":[{"name":"flagellum","type":"exact"}],"termid":"GO:0019861"}


id: PBO:0049608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 11","termid":"PBO:0049608"}


id: GO:0072750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leptomycin B stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"response to leptomycin B","termid":"GO:1901344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leptomycin B","termid":"GO:0072750"}


id: PBO:0061462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of antiviral response","termid":"PBO:0061462"}


id: PBO:0026717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_ubiquitinated_protein_in_cell","termid":"PBO:0026717"}


id: FYPO:0004640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of CAAX-protein geranylgeranyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal CAAX-protein geranylgeranyltransferase activity","termid":"FYPO:0004640"}


id: GO:2000759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of N-terminal peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein maturation","termid":"GO:1903317"},{"relation_name":"is_a","term_name":"regulation of peptidyl-lysine acetylation","termid":"GO:2000756"},{"relation_name":"regulates","term_name":"N-terminal peptidyl-lysine acetylation","termid":"GO:0018076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"regulation of N-terminal peptidyl-lysine acetylation","termid":"GO:2000759"}


id: PBO:0083899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHA domain-containing component of the Mre11 complex; MRE11-RAD50-XRS2 complex is involved in double strand breaks, meiotic recombination, telomere maintenance, and checkpoint signaling;  FHA domain is required for activation of Tel1p","termid":"PBO:0083899"}


id: PBO:0110340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C4A (Chido/Rodgers blood group)","termid":"PBO:0110340"}


id: PBO:0076536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 63 pseudogene","termid":"PBO:0076536"}


id: PBO:0090858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine cyclodeaminase-like protein","termid":"PBO:0090858"}


id: PBO:0064473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon 4, accessory subunit","termid":"PBO:0064473"}


id: GO:1990440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:21113145"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress (obsolete GO:1990440)","synonyms":[{"name":"ER stress-induced upregulation of transcription","type":"broad"},{"name":"activation of transcription from RNA polymerase II promoter in response to ER stress","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter in response to ER stress","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of transcription induced by ER stress","type":"broad"},{"name":"upregulation of Pol II transcription induced by ER stress","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1990440"}


id: PBO:0044524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dachshund family transcription factor 1","termid":"PBO:0044524"}


id: PBO:0058778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7112","termid":"PBO:0058778"}


id: PBO:0070172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 86 pseudogene","termid":"PBO:0070172"}


id: GO:0072116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the pronephros. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"is_a","term_name":"kidney rudiment formation","termid":"GO:0072003"},{"relation_name":"part_of","term_name":"pronephros morphogenesis","termid":"GO:0072114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros formation","synonyms":[{"name":"pronephric kidney formation","type":"exact"}],"termid":"GO:0072116"}


id: MONDO:0004263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal tumor with multilayered rosettes, C19MC-altered that arises from the infratentorial region and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood central nervous system primitive neuroectodermal neoplasm","termid":"MONDO:0002798"},{"relation_name":"is_a","term_name":"childhood infratentorial neoplasm","termid":"MONDO:0002915"},{"relation_name":"is_a","term_name":"infratentorial cancer","termid":"MONDO:0003107"},{"relation_name":"is_a","term_name":"intracranial primitive neuroectodermal tumor","termid":"MONDO:0003142"},{"relation_name":"is_a","term_name":"ependymoblastoma","termid":"MONDO:0016715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric infratentorial ependymoblastoma","secondary_identifiers":["NCIT:C6773","UMLS:C1332972","DOID:7522","MEDGEN:272462"],"synonyms":[{"name":"childhood infratentorial embryonal tumor with Multilayered Rosettes, C19MC-altered","type":"exact"},{"name":"childhood infratentorial embryonal tumour with Multilayered Rosettes, C19MC-altered","type":"exact"},{"name":"childhood infratentorial ependymoblastoma","type":"exact"},{"name":"pediatric infratentorial ependymoblastoma","type":"exact"}],"termid":"MONDO:0004263","xrefs":{"Monarch":{"xref_id":"0004263"}}}


id: GO:0005884
data:
  {"annotated_genes":["SJAG_01993","SJAG_04887","SJAG_03088","SJAG_03145","SJAG_02566"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71889,76053,76967,95615,109360],"is_not":false,"summary":null,"term":"GO:0005884"}]},"cv_name":"cellular_component","definition":"A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane.","definition_xrefs":["GOC:mah","ISBN:0198506732","PMID:10666339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymeric cytoskeletal fiber","termid":"GO:0099513"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01993":null,"SJAG_02566":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"actin filament","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Actin","FMA:63850","NIF_Subcellular:sao1588493326"],"synonyms":[{"name":"microfilament","type":"exact"}],"termid":"GO:0005884","terms_by_termid":{"GO:0005884":null}}


id: GO:0070451
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A long, thin cell projection that contains F-actin and tubulin, with microtubules centrally located and F-actin peripherally located.","definition_xrefs":["PMID:11526084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell hair","secondary_identifiers":["Wikipedia:Membrane_nanotube"],"synonyms":[{"name":"imaginal disc-derived wing hair","type":"narrow"},{"name":"non-sensory hair","type":"exact"}],"termid":"GO:0070451"}


id: GO:0047243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavanone + UDP-D-glucose = a flavanone 7-O-beta-D-glucoside + UDP.","definition_xrefs":["MetaCyc:2.4.1.185-RXN","EC:2.4.1.185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"flavanone 7-O-beta-glucosyltransferase activity","synonyms":[{"name":"UDP-glucose:flavanone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:flavanone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"hesperetin 7-O-glucosyl-transferase activity","type":"related"},{"name":"naringenin 7-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-flavanone 7-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047243"}


id: PBO:0056731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEST intronic transcript 1, antisense RNA","termid":"PBO:0056731"}


id: MONDO:0100364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any herpes simplex type 1 infectious disease that involves the genitals.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genital herpes","termid":"MONDO:0005770"},{"relation_name":"is_a","term_name":"herpes simplex type 1 infectious disease","termid":"MONDO:0100359"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genital herpes simplex type 1 infectious disorder","termid":"MONDO:0100364","xrefs":{"Monarch":{"xref_id":"0100364"}}}


id: GO:0090318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of chylomicron remodeling. Chylomicron remodeling is the acquisition, loss or modification of a protein or lipid within a chylomicron, including the hydrolysis of triglyceride by lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"chylomicron remodeling","termid":"GO:0034371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chylomicron remodeling","synonyms":[{"name":"regulation of chylomicron remodelling","type":"exact"}],"termid":"GO:0090318"}


id: GO:0034419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-2-hydroxyglutarate + O2 = 2-oxoglutarate + hydrogen peroxide.","definition_xrefs":["PMID:18390652"],"gene_count":0,"genotype_count":0,"name":"obsolete L-2-hydroxyglutarate oxidase activity (obsolete GO:0034419)","termid":"GO:0034419"}


id: PBO:0078470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-8","termid":"PBO:0078470"}


id: MONDO:0005053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lack of blood supply to an area of the body, resulting in impairment of tissue oxygenation.","definition_xrefs":["NCIT:C34738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ischemic disease","secondary_identifiers":["MEDGEN:5899","MESH:D054058","SCTID:52674009","UMLS:C0022116","DOID:326","MESH:D007511"],"synonyms":[{"name":"ischemia","type":"related"}],"termid":"MONDO:0005053","xrefs":{"Monarch":{"xref_id":"0005053"}}}


id: MONDO:1010926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary muscle myotonia in cattle due to a mutation in the ATP2A1 gene. This disease results in an inability to flex limbs and injurious falling. Animals also experience fatigue upon stimulation. The disorder in muscle function is due to a defect in the Ca2 pump.","definition_xrefs":["PMID:33946496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, non-human animal","termid":"MONDO:1010196"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital muscular dystonia, ATP2A1-related, cattle","secondary_identifiers":["OMIA:001450-9913"],"synonyms":[{"name":"CMD1","type":"exact"},{"name":"congenital muscular dystonia 1, cattle","type":"related"}],"termid":"MONDO:1010926","xrefs":{"Monarch":{"xref_id":"1010926"}}}


id: GO:0004230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the release of a N-terminal glutamate (and to a lesser extent aspartate) from a peptide.","definition_xrefs":["EC:3.4.11.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminopeptidase activity","termid":"GO:0004177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0008233","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"glutamyl aminopeptidase activity","secondary_identifiers":["MetaCyc:3.4.11.7-RXN"],"synonyms":[{"name":"Ca2+-activated glutamate aminopeptidase activity","type":"related"},{"name":"L-aspartate aminopeptidase activity","type":"related"},{"name":"aminopeptidase A","type":"related"},{"name":"angiotensinase A","type":"related"},{"name":"angiotensinase A2","type":"related"},{"name":"antigen BP-1/6C3 of mouse B lymphocytes","type":"related"},{"name":"aspartate aminopeptidase activity","type":"related"},{"name":"glutamyl peptidase activity","type":"related"},{"name":"membrane aminopeptidase II","type":"related"}],"termid":"GO:0004230"}


id: PBO:0061043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 4","termid":"PBO:0061043"}


id: PBO:0088710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2457 family conserved fungal protein","termid":"PBO:0088710"}


id: GO:0048674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in reformation of a growth cone by the tip of an injured axon, or in collateral sprouting of the axon. Collateral sprouting is the process in which outgrowths develop from the shafts of existing axons.","definition_xrefs":["GOC:jid","GOC:lm","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collateral sprouting","termid":"GO:0048668"},{"relation_name":"is_a","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collateral sprouting of injured axon","termid":"GO:0048674"}


id: PBO:0042013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 70","termid":"PBO:0042013"}


id: PR:Q9HE09
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fml2 gene.","definition_xrefs":["UniProtKB:Q9HE09","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase fml2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.04","synonyms":[{"name":"FANCM-like protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fml2","type":"exact"}],"termid":"PR:Q9HE09"}


id: PBO:0085692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in regulation of sterol biosynthesis; specifically stabilizes Hmg2p, one of two HMG-CoA isoenzymes that catalyze the rate-limiting step in sterol biosynthesis; forms foci at the nuclear periphery upon DNA replication stress; relocalizes to the cytosol in response to hypoxia; homolog of mammalian INSIG proteins; NSG1 has a paralog, NSG2, that arose from the whole genome duplication","termid":"PBO:0085692"}


id: MONDO:0020513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of seminoma characterized by the presence of three cell types: round cells with eosinophilic cytoplasm, small cells with dark nucleus and a small amount of cytoplasm, and mono-or multinucleated giant cells. The neoplastic cells are not cohesive. There is an edematous stroma present; lymphocytic infiltrates are rarely seen. Most patients are older males.","definition_xrefs":["NCIT:C39921"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete spermatocytoma (obsolete MONDO:0003667)","termid":"MONDO:0003667"},{"relation_name":"is_a","term_name":"testicular seminoma","termid":"MONDO:0003669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spermatocytic seminoma","secondary_identifiers":["DOID:7891","DOID:5834","GARD:16921","MEDGEN:83159","Orphanet:99865","ICDO:9063/3","UMLS:C0334517"],"synonyms":[{"name":"spermatocytic seminoma","type":"exact"},{"name":"spermatocytoma","type":"related"},{"name":"testicular spermatocytic seminoma","type":"exact"}],"termid":"MONDO:0020513","xrefs":{"Monarch":{"xref_id":"0020513"}}}


id: GO:0099134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a sorocarp formed by aggregation of cells with different genotypes.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sorocarp development","termid":"GO:0030587"},{"relation_name":"is_a","term_name":"chimeric non-reproductive fruiting body development","termid":"GO:0099136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chimeric sorocarp development","termid":"GO:0099134"}


id: PBO:0065132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkin RBR E3 ubiquitin protein ligase","termid":"PBO:0065132"}


id: GO:0009320
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses phosphoribosylaminoimidazole carboxylase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase complex","termid":"GO:0009320"}


id: MONDO:0016383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrogenic diabetes insipidus (NDI) is characterized by polyuria with polydipsia, recurrent bouts of fever, constipation, and acute hypernatremic dehydration after birth that may cause neurological sequelae. Polyuria may exceed 10 liters in children.","definition_xrefs":["Orphanet:223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impaired renal function disease","termid":"MONDO:0001343"},{"relation_name":"is_a","term_name":"diabetes insipidus","termid":"MONDO:0004782"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrogenic diabetes insipidus","secondary_identifiers":["MedDRA:10029147","MESH:D018500","NORD:1497","NCIT:C84919","SCTID:111395007","NANDO:2200326","MEDGEN:57876","GARD:7178","DOID:12387","ICD10CM:N25.1","icd11.foundation:1417669099","ICD9:588.1","NANDO:1200742","UMLS:C0162283"],"synonyms":[{"name":"ADH resistant diabetes insipidus","type":"related"},{"name":"diabetes insipidus nephrogenic","type":"related"},{"name":"diabetes insipidus nephrogenic X-linked","type":"related"},{"name":"diabetes insipidus nephrogenic type 1","type":"related"},{"name":"vasopressin-resistant diabetes insipidus","type":"related"}],"termid":"MONDO:0016383","xrefs":{"Monarch":{"xref_id":"0016383"}}}


id: PBO:0064149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 2","termid":"PBO:0064149"}


id: GO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring in non-dividing cells as they age as a result of reactive oxygen species, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to reactive oxygen species involved in chronological cell aging (obsolete GO:0001320)","synonyms":[{"name":"age-dependent response to AOS during chronological cell aging","type":"related"},{"name":"age-dependent response to ROI during chronological cell aging","type":"related"},{"name":"age-dependent response to ROS during chronological cell aging","type":"related"},{"name":"age-dependent response to active oxygen species during chronological cell aging","type":"related"},{"name":"age-dependent response to reactive oxidative species during chronological cell aging","type":"related"},{"name":"age-dependent response to reactive oxygen intermediate during chronological cell aging","type":"related"},{"name":"age-dependent response to reactive oxygen species during chronological cell ageing","type":"related"},{"name":"age-dependent response to reactive oxygen species during chronological cell aging","type":"related"}],"termid":"GO:0001320"}


id: PBO:0036016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-J-shaped_vegetative_cell","termid":"PBO:0036016"}


id: PBO:0077288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM30B pseudogene 1","termid":"PBO:0077288"}


id: PBO:0050490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B cluster","termid":"PBO:0050490"}


id: GO:0031656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of heat dissipation.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heat dissipation","termid":"GO:0031654"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"heat dissipation","termid":"GO:0031653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heat dissipation","synonyms":[{"name":"activation of heat dissipation","type":"narrow"},{"name":"stimulation of heat dissipation","type":"narrow"},{"name":"up regulation of heat dissipation","type":"exact"},{"name":"up-regulation of heat dissipation","type":"exact"},{"name":"upregulation of heat dissipation","type":"exact"}],"termid":"GO:0031656"}


id: PBO:0072253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 28","termid":"PBO:0072253"}


id: PBO:0017899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidyl-N-dimethylethanolamine N-methyltransferase","termid":"PBO:0017899"}


id: MONDO:0004148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intraluminal papillary neoplasm, usually with high grade intraepithelial neoplasia, that arises from the gallbladder. It is associated with the presence of an invasive carcinoma. The carcinomatous component is usually an adenocarcinoma.","definition_xrefs":["NCIT:C5743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenocarcinoma","termid":"MONDO:0002512"},{"relation_name":"is_a","term_name":"gallbladder papillary neoplasm","termid":"MONDO:0002518"},{"relation_name":"is_a","term_name":"gallbladder adenocarcinoma","termid":"MONDO:0006215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"gallbladder papillary neoplasm with an associated invasive carcinoma","secondary_identifiers":["DOID:7221","ICDO:8503/3","MEDGEN:232226","UMLS:C1333753"],"synonyms":[{"name":"gall bladder papillary carcinoma","type":"exact"},{"name":"gallbladder papillary carcinoma","type":"related"},{"name":"gallbladder papillary neoplasm with an associated invasive cancer","type":"exact"},{"name":"gallbladder papillary neoplasm with an associated invasive carcinoma","type":"exact"},{"name":"intracystic papillary neoplasm with an associated invasive carcinoma","type":"exact"},{"name":"papillary carcinoma of gallbladder","type":"exact"},{"name":"papillary carcinoma of the gallbladder","type":"exact"}],"termid":"MONDO:0004148","xrefs":{"Monarch":{"xref_id":"0004148"}}}


id: MONDO:0000767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nut midline carcinoma (obsolete MONDO:0000767)","termid":"MONDO:0000767","xrefs":{"Monarch":{"xref_id":"0000767"}}}


id: PBO:0091565
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-Like Protein","termid":"PBO:0091565"}


id: PBO:0018046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc15","termid":"PBO:0018046"}


id: PBO:0001407
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlapping genome wide occupancy in promoters Nap1/Hrp1/Hrp3","termid":"PBO:0001407"}


id: MONDO:0021057
data:
  {"annotated_genes":["SJAG_02261","SJAG_01419","SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012041"},{"annotations":[85588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014630"},{"annotations":[87476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044300"}]},"cv_name":"mondo","definition":"An inherited diseases haracterized by the development of adenomas in the rectum and colon; classified into classic FAP and attenuated FAP.","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"is_obsolete":false,"name":"classic or attenuated familial adenomatous polyposis","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"classic or attenuated FAP","type":"exact"},{"name":"classic or attenuated familial adenomatous polyposis","type":"exact"}],"termid":"MONDO:0021057","terms_by_termid":{"MONDO:0012041":null,"MONDO:0014630":null,"MONDO:0044300":null},"xrefs":{"Monarch":{"xref_id":"0021057"}}}


id: GO:0031601
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The core complex of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex","termid":"GO:0005839"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome complex","termid":"GO:0031595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"nuclear proteasome core complex","termid":"GO:0031601"}


id: MONDO:0020025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare male infertility.","gene_count":0,"genotype_count":0,"name":"obsolete rare male infertility (obsolete MONDO:0020025)","secondary_identifiers":["Orphanet:98048"],"synonyms":[{"name":"rare male infertility","type":"exact"}],"termid":"MONDO:0020025","xrefs":{"Monarch":{"xref_id":"0020025"}}}


id: PBO:0043689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 4I1 pseudogene 2","termid":"PBO:0043689"}


id: _global:added_by
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a gene product that adds the modification.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"added_by","termid":"_global:added_by"}


id: PBO:0043971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta pseudogene 1","termid":"PBO:0043971"}


id: GO:0070142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Evagination of a membrane to form a synaptic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle budding from membrane","termid":"GO:0006900"},{"relation_name":"part_of","term_name":"synaptic vesicle transport","termid":"GO:0048489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"synaptic vesicle budding","termid":"GO:0070142"}


id: PBO:0049076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 107","termid":"PBO:0049076"}


id: GO:1902181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of verruculogen.","definition_xrefs":["PMID:23649274","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"verruculogen metabolic process","termid":"GO:1902179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"verruculogen biosynthetic process","synonyms":[{"name":"verruculogen anabolism","type":"exact"},{"name":"verruculogen biosynthesis","type":"exact"},{"name":"verruculogen formation","type":"exact"},{"name":"verruculogen synthesis","type":"exact"}],"termid":"GO:1902181"}


id: GO:1905108
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115992],"is_not":false,"summary":null,"term":"GO:1905108"}]},"cv_name":"molecular_function","definition":"Binding to guanosine.","definition_xrefs":["GOC:TermGenie","PMID:26007660","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside binding","termid":"GO:0032550"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"guanosine binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905108","terms_by_termid":{"GO:1905108":null}}


id: PBO:0075304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 2 pseudogene 2","termid":"PBO:0075304"}


id: PBO:0068421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding region (RNP1, RRM) containing 3 pseudogene 1","termid":"PBO:0068421"}


id: PBO:0063974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 8","termid":"PBO:0063974"}


id: PBO:0048957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein Ib platelet subunit alpha","termid":"PBO:0048957"}


id: PBO:0073092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit C pseudogene 1","termid":"PBO:0073092"}


id: PBO:0040465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP13A5 antisense RNA 1","termid":"PBO:0040465"}


id: FYPO:0007569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septation initiation network signaling is abnormal SIN signaling is mediated by the small GTPase Ras, and results in the initiation of contraction of the contractile ring at the beginning of cytokinesis and cell division by septum formation.","definition_xrefs":["PomBase:mah","GO:0031028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000298","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal septation initiation network signaling","synonyms":[{"name":"abnormal SIN signaling","type":"exact"},{"name":"abnormal SIN signalling","type":"exact"},{"name":"abnormal septation initiation network signaling during mitotic cell cycle","type":"related"},{"name":"abnormal septation initiation network signaling during vegetative growth","type":"exact"},{"name":"abnormal septation initiation network signalling","type":"exact"},{"name":"abnormal septation initiation signaling","type":"exact"},{"name":"septation initiation defective","type":"exact"}],"termid":"FYPO:0007569"}


id: MONDO:0010071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spondyloenchondrodysplasia (obsolete MONDO:0010071)","termid":"MONDO:0010071","xrefs":{"Monarch":{"xref_id":"0010071"}}}


id: FYPO:0007144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of deoxyribonuclease (pyrimidine dimer) activity is increased during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"},{"relation_name":"is_a","term_name":"increased 5'-deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0005447","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000002"],"is_obsolete":false,"name":"increased deoxyribonuclease (pyrimidine dimer) activity during cellular response to UV","synonyms":[{"name":"increased 5'-deoxyribonuclease (pyrimidine dimer) activity during cellular response to UV","type":"narrow"},{"name":"increased deoxyribonuclease (pyrimidine dimer) activity during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0007144"}


id: GO:0031525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of menthol, the monoterpene 2-isopropyl-5-methylcyclohexanol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid biosynthetic process","termid":"GO:0016099"},{"relation_name":"is_a","term_name":"menthol metabolic process","termid":"GO:0031524"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"menthol biosynthetic process","synonyms":[{"name":"menthol anabolism","type":"exact"},{"name":"menthol biosynthesis","type":"exact"},{"name":"menthol formation","type":"exact"},{"name":"menthol synthesis","type":"exact"}],"termid":"GO:0031525"}


id: MONDO:0008757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most severe form of alopecia areata, an inflammatory disease of the hair follicle, which is characterized by a complete loss of hair of the scalp and all the hair-bearing areas of the body.","definition_xrefs":["Orphanet:701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alopecia universalis congenita","secondary_identifiers":["GARD:614","SCTID:86166000","ICD9:704.09","DOID:0050634","OMIM:203655","MESH:C537055","UMLS:C1859877","MedDRA:10001767","MEDGEN:349262"],"synonyms":[{"name":"ALUNC","type":"related"},{"name":"AU","type":"related"},{"name":"alopecia areata universalis","type":"related"},{"name":"alopecia universalis","type":"related"},{"name":"alopecia universalis congenita","type":"exact"},{"name":"atrichia, generalised","type":"exact"},{"name":"atrichia, generalized","type":"exact"}],"termid":"MONDO:0008757","xrefs":{"Monarch":{"xref_id":"0008757"}}}


id: PBO:0077040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THOC7 antisense RNA 1","termid":"PBO:0077040"}


id: MOD:01888
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes two neutral hydrogen atoms (proton and electron) from a residue.","definition_xrefs":["Unimod:401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrogenated residue","termid":"MOD:00683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"didehydrogenated residue","synonyms":[{"name":"2dHRes","type":"exact"}],"termid":"MOD:01888"}


id: PR:Q9Y7N0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bromodomain-containing protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1 complex bromodomain subunit bdf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.02","secondary_identifiers":["UniProtKB:Q9Y7N0"],"synonyms":[{"name":"Spom972h-BRD3","type":"exact"}],"termid":"PR:Q9Y7N0"}


id: GO:1903725
data:
  {"annotated_genes":["SJAG_03940","SJAG_01187","SJAG_02613","SJAG_02380","SJAG_00053","SJAG_03170","SJAG_01906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90752,104692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[115783,111680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[110035,113053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"},{"annotations":[117835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phospholipid metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:10657240","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"regulates","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01187":null,"SJAG_01906":null,"SJAG_02380":null,"SJAG_02613":null,"SJAG_03170":null,"SJAG_03940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phospholipid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of phospholipid metabolism","type":"exact"}],"termid":"GO:1903725","terms_by_termid":{"GO:0071072":null,"GO:1902647":null,"GO:1902648":null,"GO:2001211":null}}


id: GO:0060797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to an unspecified cell adopting a mesoderm fate.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in primary germ layer cell fate commitment (obsolete GO:0060797)","synonyms":[{"name":"transforming growth factor beta receptor signalling pathway involved in primary germ layer cell fate commitment","type":"exact"}],"termid":"GO:0060797"}


id: PBO:0051244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-65-1 (pseudogene)","termid":"PBO:0051244"}


id: PATO:0000247
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000247 proboscis extension reflex (obsolete PATO:0000247)","termid":"PATO:0000247"}


id: PBO:0055157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2576","termid":"PBO:0055157"}


id: MONDO:0001253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete solar retinopathy (obsolete MONDO:0001253)","secondary_identifiers":["DOID:11282","ICD9:363.31","SCTID:1135000"],"synonyms":[{"name":"solar retinitis","type":"exact"}],"termid":"MONDO:0001253","xrefs":{"Monarch":{"xref_id":"0001253"}}}


id: MONDO:0008176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone Paget disease","termid":"MONDO:0005382"},{"relation_name":"is_a","term_name":"SQSTM1-related multisystem proteinopathy","termid":"MONDO:0800464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"Paget disease of bone 3","secondary_identifiers":["DOID:0081366","MEDGEN:895927","OMIM:167250","UMLS:C4085252"],"synonyms":[{"name":"PDB3","type":"related"},{"name":"Paget disease of bone 3","type":"exact"},{"name":"Paget disease of bone type 3","type":"exact"},{"name":"Paget disease of bone, familial","type":"related"},{"name":"familial Paget disease of bone","type":"related"}],"termid":"MONDO:0008176","xrefs":{"Monarch":{"xref_id":"0008176"}}}


id: FYPO:0008303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during prophase of the first division of the meiotic cell cycle in which the number of sites at which the protein Rad51 accumulates is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal number of Rad51 foci during meiotic prophase I","termid":"FYPO:0008303"}


id: PBO:0011140
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CAN1","termid":"PBO:0011140"}


id: PBO:0073827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 5 pseudogene 1","termid":"PBO:0073827"}


id: GO:0090462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of orthinine within a cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular amino acid homeostasis","termid":"GO:0080144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular ornithine homeostasis","synonyms":[{"name":"cellular ornithine homeostasis","type":"exact"},{"name":"ornithine homeostasis","type":"exact"}],"termid":"GO:0090462"}


id: GO:1903491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a simvastatin stimulus. Simvastatin is a statin used as a cholesterol-lowering and anti-cardiovascular disease drug.","definition_xrefs":["GOC:sl","GOC:TermGenie","PMID:23100282","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to statin","termid":"GO:0036273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to simvastatin","termid":"GO:1903491"}


id: PBO:0067852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 154","termid":"PBO:0067852"}


id: GO:0010273
data:
  {"annotated_genes":["SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71182],"is_not":false,"summary":null,"term":"GO:0010273"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of copper ion. These include transport of copper away from sensitive areas and to compartments or complexes whose purpose is sequestration of copper ion.","definition_xrefs":["GOC:kmv","PMID:16367966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"stress response to copper ion","termid":"GO:1990169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of copper ion","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0010273","terms_by_termid":{"GO:0010273":null}}


id: MONDO:0015818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aggressive primary cutaneous B-cell lymphoma (obsolete MONDO:0015818)","secondary_identifiers":["Orphanet:178554"],"termid":"MONDO:0015818","xrefs":{"Monarch":{"xref_id":"0015818"}}}


id: FYPO:0002779
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to nucleus, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"abolished protein localisation to nucleus, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization in nucleus, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to nucleus, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"nuclear exclusion, with protein mislocalized to cytoplasm, during vegetative growth","type":"related"},{"name":"nuclear protein exclusion, with protein mislocalized to cytoplasm, during vegetative growth","type":"related"},{"name":"protein localization to nucleus abolished, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0002779"}


id: PBO:0031448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0031448"}


id: GO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows zygotene during prophase I of meiosis, and during which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic prophase I","termid":"GO:0007128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007128"}],"interesting_parent_ids":["GO:0007128","GO:0008150"],"is_obsolete":false,"name":"pachytene","secondary_identifiers":["Wikipedia:Meiosis#Pachytene","Wikipedia:Pachytene"],"termid":"GO:0000239"}


id: GO:0034023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxyamino-1-(5-phospho-D-ribosyl)imidazole = 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate.","definition_xrefs":["EC:5.4.99.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"5-(carboxyamino)imidazole ribonucleotide mutase activity","secondary_identifiers":["MetaCyc:RXN0-743","RHEA:13193"],"synonyms":[{"name":"5-carboxyamino-1-(5-phospho-D-ribosyl)imidazole carboxymutase activity","type":"related"},{"name":"N5-CAIR mutase activity","type":"related"},{"name":"N5-carboxyaminoimidazole ribonucleotide mutase activity","type":"related"},{"name":"PurE","type":"related"},{"name":"class I PurE","type":"related"}],"termid":"GO:0034023"}


id: GO:1901399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of transforming growth factor beta3 activation.","definition_xrefs":["GOC:TermGenie","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transforming growth factor beta3 activation (obsolete GO:1901399)","synonyms":[{"name":"down regulation of TGF-beta 3 activation","type":"exact"},{"name":"down regulation of TGFB3 activation","type":"exact"},{"name":"down regulation of TGFbeta 3 activation","type":"exact"},{"name":"down regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"down-regulation of TGF-beta 3 activation","type":"exact"},{"name":"down-regulation of TGFB3 activation","type":"exact"},{"name":"down-regulation of TGFbeta 3 activation","type":"exact"},{"name":"down-regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"downregulation of TGF-beta 3 activation","type":"exact"},{"name":"downregulation of TGFB3 activation","type":"exact"},{"name":"downregulation of TGFbeta 3 activation","type":"exact"},{"name":"downregulation of transforming growth factor beta3 activation","type":"exact"},{"name":"inhibition of TGF-beta 3 activation","type":"exact"},{"name":"inhibition of TGFB3 activation","type":"exact"},{"name":"inhibition of TGFbeta 3 activation","type":"exact"},{"name":"inhibition of transforming growth factor beta3 activation","type":"narrow"},{"name":"negative regulation of TGF-beta 3 activation","type":"exact"},{"name":"negative regulation of TGFB3 activation","type":"exact"},{"name":"negative regulation of TGFbeta 3 activation","type":"exact"}],"termid":"GO:1901399"}


id: PBO:0038817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 21","termid":"PBO:0038817"}


id: PBO:0029503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_elongated,_curved_germ_tube","termid":"PBO:0029503"}


id: PBO:0036113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_glycosylation_during_vegetative_growth","termid":"PBO:0036113"}


id: PBO:0013101
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leucine-rich Repeat Protein","termid":"PBO:0013101"}


id: PBO:0044777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX59 antisense RNA 1","termid":"PBO:0044777"}


id: PBO:0005071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ria1 (predicted)","termid":"PBO:0005071"}


id: PBO:0056970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 26a-1","termid":"PBO:0056970"}


id: GO:0072003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a kidney rudiment from unspecified parts. A kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"kidney morphogenesis","termid":"GO:0060993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney rudiment formation","synonyms":[{"name":"kidney anlage formation","type":"related"}],"termid":"GO:0072003"}


id: PBO:0054657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2063","termid":"PBO:0054657"}


id: PBO:0030546
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_cAMP_level","termid":"PBO:0030546"}


id: PBO:0031014
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_actinomycin_D","termid":"PBO:0031014"}


id: PBO:0077036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THOC3 antisense RNA 1","termid":"PBO:0077036"}


id: MONDO:0028868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic frontotemporal degeneration with dementia (obsolete MONDO:0028868)","secondary_identifiers":["Orphanet:276061"],"termid":"MONDO:0028868","xrefs":{"Monarch":{"xref_id":"0028868"}}}


id: GO:0050488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + ecdysteroid = UDP + glucosyl-ecdysteroid.","definition_xrefs":["GOC:ai","PMID:10073711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"ecdysteroid UDP-glucosyltransferase activity","secondary_identifiers":["GO:0050489"],"synonyms":[{"name":"ecdysteroid UDP-glucosyl/UDP-glucuronosyl transferase activity","type":"related"}],"termid":"GO:0050488"}


id: MONDO:0005871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections caused by nematode larvae which never develop into the adult stage and migrate through various body tissues. They commonly infect the skin, eyes, and viscera in humans. Ancylostoma brasiliensis causes cutaneous larva migrans. Toxocara causes visceral larva migrans.","definition_xrefs":["MESH:D007815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nematoda infectious disease","secondary_identifiers":["MONDO:0021556","EFO:0007391","MEDGEN:45025","MESH:D009349","SCTID:84706005","UMLS:C0027583"],"synonyms":[{"name":"Disease due to Nematoda","type":"related"},{"name":"Infection, Nematode","type":"related"},{"name":"Infections, Nematode","type":"related"},{"name":"Nematoda caused disease or disorder","type":"exact"},{"name":"Nematoda disease or disorder","type":"exact"},{"name":"Nematode Infection","type":"related"},{"name":"Nematode Infections","type":"related"},{"name":"Nematode infection","type":"related"},{"name":"Nematodiasis","type":"related"},{"name":"disease due to nematoda","type":"exact"},{"name":"nematode infection","type":"related"},{"name":"nematodiasis","type":"related"}],"termid":"MONDO:0005871","xrefs":{"Monarch":{"xref_id":"0005871"}}}


id: MONDO:0014667
data:
  {"annotated_genes":["SJAG_05199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85444],"is_not":false,"summary":null,"term":"MONDO:0014667"}]},"cv_name":"mondo","definition":"Any fatal infantile encephalocardiomyopathy in which the cause of the disease is a mutation in the COA5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal infantile encephalocardiomyopathy","termid":"MONDO:0015487"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005267","MONDO:0004069","MONDO:0005336"],"is_obsolete":false,"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18572","DOID:0080359","UMLS:C4225154","MEDGEN:903495","OMIM:616500"],"synonyms":[{"name":"CEMCOX3","type":"related"},{"name":"COA5 fatal infantile encephalocardiomyopathy","type":"exact"},{"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome C oxidase deficiency type 3","type":"exact"},{"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency 3","type":"exact"},{"name":"fatal infantile encephalocardiomyopathy caused by mutation in COA5","type":"exact"},{"name":"mitochondrial complex IV, deficiency, nuclear type 9","type":"exact"}],"termid":"MONDO:0014667","terms_by_termid":{"MONDO:0014667":null},"xrefs":{"Monarch":{"xref_id":"0014667"}}}


id: PBO:0056799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitofusin 2","termid":"PBO:0056799"}


id: PBO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.11","termid":"PBO:0000142"}


id: FYPO:0003747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during meiosis, and that contain determinant of selective removal (DSR) sequences, measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:24713849","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0007281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal level of DSR-containing meiotic gene mRNA during vegetative growth","synonyms":[{"name":"normal DSR-containing meiotic gene mRNA accumulation during vegetative growth","type":"related"},{"name":"normal level of DSR-containing meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"normal level of DSR-containing meiotic gene RNA during vegetative growth","type":"exact"},{"name":"normal level of DSR-containing meiotic gene mRNA during mitotic cell cycle","type":"related"},{"name":"normal level of DSR-containing meiotic gene transcripts during vegetative growth","type":"exact"},{"name":"normal level of DSR-containing meiotic nuclear division gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0003747"}


id: GO:0043631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of adenylyl residues at the 3' end of an RNA molecule.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polyadenylation (obsolete GO:0043631)","termid":"GO:0043631"}


id: PR:O14276
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fyv7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein fyv7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.07","synonyms":[{"name":"Spom972h-fyv7","type":"exact"}],"termid":"PR:O14276"}


id: PBO:0056104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 9, pseudogene","termid":"PBO:0056104"}


id: GO:0035426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information between the extracellular matrix and a cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"extracellular matrix-cell signaling","synonyms":[{"name":"cell-extracellular matrix signalling","type":"exact"},{"name":"extracellular matrix-cell signalling","type":"exact"}],"termid":"GO:0035426"}


id: GO:0043387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a mycotoxin, any poisonous substance produced by a fungus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin catabolic process","termid":"GO:0009407"},{"relation_name":"is_a","term_name":"mycotoxin metabolic process","termid":"GO:0043385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0098754"],"is_obsolete":false,"name":"mycotoxin catabolic process","synonyms":[{"name":"mycotoxin breakdown","type":"exact"},{"name":"mycotoxin catabolism","type":"exact"},{"name":"mycotoxin degradation","type":"exact"}],"termid":"GO:0043387"}


id: PBO:0042431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC37L1 divergent transcript","termid":"PBO:0042431"}


id: PBO:0081680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 601, pseudogene","termid":"PBO:0081680"}


id: PBO:0056236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI2 antisense RNA 3","termid":"PBO:0056236"}


id: PBO:0071442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 48","termid":"PBO:0071442"}


id: GO:0071394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a testosterone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to testosterone","termid":"GO:0033574"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to testosterone stimulus","termid":"GO:0071394"}


id: PBO:0005390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIP41-like type 2a phosphatase regulator Tip41","termid":"PBO:0005390"}


id: PBO:0029799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short,_misoriented_actin_cables","termid":"PBO:0029799"}


id: GO:0050383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uracil + acceptor = barbiturate + reduced acceptor.","definition_xrefs":["RHEA:22752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"uracil dehydrogenase activity","secondary_identifiers":["MetaCyc:URACIL-DEHYDROGENASE-RXN"],"termid":"GO:0050383"}


id: GO:0006590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of either of the compounds secreted by the thyroid gland, mainly thyroxine and triiodothyronine. This is achieved by the iodination and joining of tyrosine molecules to form the precursor thyroglobin, proteolysis of this precursor gives rise to the thyroid hormones.","definition_xrefs":["GOC:jl","ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid hormone metabolic process","termid":"GO:0042403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid hormone generation","secondary_identifiers":["Reactome:R-HSA-209968"],"termid":"GO:0006590"}


id: MONDO:0800345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 17","secondary_identifiers":["MEDGEN:861997","UMLS:C4013560"],"synonyms":[{"name":"ATFB17","type":"exact"}],"termid":"MONDO:0800345","xrefs":{"Monarch":{"xref_id":"0800345"}}}


id: PBO:0075565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-1 proto-oncogene","termid":"PBO:0075565"}


id: GO:0045994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving iron that activates or increases the rate of translational initiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation by iron","termid":"GO:0006447"},{"relation_name":"is_a","term_name":"positive regulation of translational initiation","termid":"GO:0045948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translational initiation by iron","synonyms":[{"name":"activation of translational initiation by iron","type":"narrow"},{"name":"stimulation of translational initiation by iron","type":"narrow"},{"name":"up regulation of translational initiation by iron","type":"exact"},{"name":"up-regulation of translational initiation by iron","type":"exact"},{"name":"upregulation of translational initiation by iron","type":"exact"}],"termid":"GO:0045994"}


id: PBO:0083791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in vesicle-mediated ER to Golgi transport; binds membranes and functions during vesicle docking to the Golgi; required for assembly of the ER-to-Golgi SNARE complex","termid":"PBO:0083791"}


id: MONDO:0010001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectodermal dysplasia-blindness syndrome is characterized by intellectual deficit, blindness caused by ocular malformations (microphthalmia, microcornea and sclerocornea), short stature, dysmorphic facial features (narrow nasal bridge and prominent ears), hypotrichosis, and malaligned teeth. It has been described in two siblings (brother and sister) and is likely to be transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:1806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"ectodermal dysplasia-blindness syndrome","secondary_identifiers":["UMLS:C1849332","OMIM:268320","MEDGEN:340297","GARD:2045","MESH:C535865"],"synonyms":[{"name":"RODRIGUES blindness","type":"related"},{"name":"microphthalmia, microcornea, and sclerocornea with short stature and hair and dental abnormalities","type":"related"},{"name":"microphthalmos, microcornea, and sclerocornea with short stature and hair and dental abnormalities","type":"related"}],"termid":"MONDO:0010001","xrefs":{"Monarch":{"xref_id":"0010001"}}}


id: MONDO:0005933
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant neoplasm of the lung composed of tubular structures and immature mesenchymal elements, which may differentiate towards skeletal and smooth muscle, cartilage or a combination of muscle and cartilage. This is a nodular tumor found in the periphery of the lung. It can occur at any age. The prognosis is related to the stage of the disease at the time of resection. Pulmonary blastoma is divided into two subtypes: epithelial predominant and biphasic.","definition_xrefs":["NCIT:C3732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blastoma","termid":"MONDO:0005565"},{"relation_name":"is_a","term_name":"lung sarcomatoid carcinoma","termid":"MONDO:0006279"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pulmonary blastoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0007458","Orphanet:64741","ICD9:162.9","GARD:18864","SCTID:189815007","ICDO:8972/3","MESH:D018202","MEDGEN:61645","UMLS:C0206629","DOID:4765"],"synonyms":[{"name":"Pneumoblastoma","type":"exact"},{"name":"blastoma of lung","type":"exact"},{"name":"blastoma of the lung","type":"exact"},{"name":"lung blastoma","type":"exact"},{"name":"pulmonary blastoma","type":"exact"}],"termid":"MONDO:0005933","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0005933"}}}


id: MONDO:0011506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, infantile epilepsy syndrome disease characterized by neonatal- to infancy-onset myoclonic focal seizures occurring in various members of a family, associated in some with mild dysarthria, ataxia and borderline-to-moderate intellectual disability.","definition_xrefs":["Orphanet:352582"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"early myoclonic encephalopathy","termid":"MONDO:0016022"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"myoclonic epilepsy","termid":"MONDO:0100577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial infantile myoclonic epilepsy","secondary_identifiers":["UMLS:C0917800","GARD:17521","OMIM:605021","MEDGEN:181488"],"synonyms":[{"name":"Eim","type":"related"},{"name":"FIME","type":"exact"},{"name":"familial infantile myoclonus epilepsy","type":"exact"},{"name":"myoclonic epilepsy, familial infantile","type":"related"},{"name":"myoclonic epilepsy, infantile, familial","type":"exact"}],"termid":"MONDO:0011506","xrefs":{"Monarch":{"xref_id":"0011506"}}}


id: PBO:0087169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C82","termid":"PBO:0087169"}


id: MOD:00934
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Post-translational","definition_xrefs":["Unimod:506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"levuglandinyl (prostaglandin H2) adduct","termid":"MOD:00846"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Levuglandinyl - arginine hydroxylactam adduct","synonyms":[{"name":"LG-Hlactam-R","type":"related"},{"name":"Levuglandinyl - arginine hydroxylactam adduct","type":"related"}],"termid":"MOD:00934"}


id: GO:0033526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next, from other compounds, including L-glutamate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0033013","GO:0044281"],"is_obsolete":false,"name":"tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"tetrapyrrole formation from glutamate","type":"exact"},{"name":"tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:0033526"}


id: GO:0090524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5).","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome-b5 reductase activity, acting on NAD(P)H","termid":"GO:0004128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cytochrome-b5 reductase activity, acting on NADH","synonyms":[{"name":"cytochrome b5 reductase activity","type":"broad"}],"termid":"GO:0090524"}


id: PBO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Spc2 (predicted)","termid":"PBO:0002257"}


id: PBO:0062665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily G member 1","termid":"PBO:0062665"}


id: PBO:0085390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane low glucose sensor, regulates glucose transport; high affinity sensor that contains 12 predicted transmembrane segments and a long C-terminal tail required for induction of hexose transporters; also senses fructose and mannose; SNF3 has a paralog, RGT2, that arose from the whole genome duplication","termid":"PBO:0085390"}


id: GO:1903877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 21-deoxycortisol.","definition_xrefs":["GOC:TermGenie","PMID:10802282","GO_REF:0000067","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"21-deoxycortisol binding","termid":"GO:1903877"}


id: MONDO:0008748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Hermansky-Pudlak syndrome in which the cause of the disease is a mutation in the HPS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome with pulmonary fibrosis","termid":"MONDO:0016501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005570","MONDO:0005066"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome 1","secondary_identifiers":["NCIT:C150367","MESH:C538539","OMIM:203300","UMLS:C2931875","DOID:0060539","GARD:18331","MEDGEN:419514"],"synonyms":[{"name":"Delta storage pool disease","type":"related"},{"name":"HPS1","type":"related"},{"name":"HPS1 Hermansky-Pudlak syndrome","type":"exact"},{"name":"Hermansky-Pudlak syndrome 1","type":"exact"},{"name":"Hermansky-Pudlak syndrome caused by mutation in HPS1","type":"exact"},{"name":"Hermansky-Pudlak syndrome type 1","type":"exact"},{"name":"albinism with hemorrhagic diathesis and pigmented reticuloendothelial cells","type":"related"}],"termid":"MONDO:0008748","xrefs":{"Monarch":{"xref_id":"0008748"}}}


id: PBO:0068105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 412","termid":"PBO:0068105"}


id: PBO:0045403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 5","termid":"PBO:0045403"}


id: GO:0090270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"fibroblast growth factor production","termid":"GO:0090269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast growth factor production","termid":"GO:0090270"}


id: MONDO:1040017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intestinal disorder characterized by an opening in the intestine to some epithelial surface.","definition_xrefs":["PMID:30480947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal fistula","secondary_identifiers":["MEDGEN:5862","UMLS:C0021833"],"termid":"MONDO:1040017","xrefs":{"Monarch":{"xref_id":"1040017"}}}


id: SO:1001267
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001267 stop_codon_readthrough (obsolete SO:1001267)","termid":"SO:1001267"}


id: MONDO:0018887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Cutaneous lupus erythematosus (CLE) is an autoimmune disease that denotes a heterogeneous spectrum of clinical manifestations affecting the skin and can be divided into 4 categories: acute CLE (ACLE); subacute CLE (SCLE); chronic CLE (CCLE; the most diverse form); and intermittent CLE (ICLE). CLE can either occur alone or associated with systemic lupus erythematosus (SLE).","definition_xrefs":["Orphanet:535"],"gene_count":0,"genotype_count":0,"name":"obsolete rare cutaneous lupus erythematosus (obsolete MONDO:0018887)","secondary_identifiers":["MedDRA:10056509","MESH:D008178"],"synonyms":[{"name":"rare cutaneous lupus erythematosus","type":"exact"}],"termid":"MONDO:0018887","xrefs":{"Monarch":{"xref_id":"0018887"}}}


id: GO:0052604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-methyl-6-phytyl-1,4-benzoquinone = delta-tocopherol.","definition_xrefs":["PMID:12213958"],"gene_count":0,"genotype_count":0,"name":"obsolete delta-tocopherol cyclase activity (obsolete GO:0052604)","termid":"GO:0052604"}


id: PR:O42911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm25 gene.","definition_xrefs":["UniProtKB:O42911","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S25, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.04","synonyms":[{"name":"Spom972h-rsm25","type":"exact"}],"termid":"PR:O42911"}


id: PBO:0006190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_happens_during","termid":"PBO:0006190"}


id: FYPO:0004910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is localized normally (i.e. indistinguishably from wild type) to discrete regions in the nucleus, visible as foci or dots by microscopy.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal punctate nuclear protein localization","synonyms":[{"name":"normal punctate nuclear protein localisation","type":"exact"},{"name":"normal punctate nuclear protein localization during mitotic cell cycle","type":"related"},{"name":"normal punctate nuclear protein localization during vegetative growth","type":"exact"}],"termid":"FYPO:0004910"}


id: PBO:0077172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tolloid like 1","termid":"PBO:0077172"}


id: GO:0019267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asparagine from other compounds, including cysteine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine biosynthetic process","termid":"GO:0006529"},{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"asparagine biosynthetic process from cysteine","secondary_identifiers":["MetaCyc:ASPSYNII-PWY"],"synonyms":[{"name":"asparagine anabolism from cysteine","type":"exact"},{"name":"asparagine formation from cysteine","type":"exact"},{"name":"asparagine synthesis from cysteine","type":"exact"}],"termid":"GO:0019267"}


id: PBO:0086633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; potential Cdc28p substrate; null mutant is sensitive to expression of the top1-T722A allele","termid":"PBO:0086633"}


id: MONDO:0019479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant neoplasm with a poor response to therapy, usually presenting as stage III/IV disease. It is characterized by the presence of neoplastic cells with morphologic and immunophenotypic characteristics similar to those seen in mature histiocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytic and dendritic cell neoplasm","termid":"MONDO:0006247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"histiocytic sarcoma","secondary_identifiers":["UMLS:C0334663","ONCOTREE:HS","GARD:19080","ICD9:171.9","icd11.foundation:1925254893","MESH:D054747","Orphanet:86896","icd11.foundation:911785965","ICDO:9755/3","MEDGEN:137793","ICD10CM:C96.A","SCTID:109988003","DOID:0080915","NCIT:C27349"],"synonyms":[{"name":"histiocytic sarcoma","type":"exact"},{"name":"sarcoma, histiocytic, malignant","type":"exact"}],"termid":"MONDO:0019479","xrefs":{"Monarch":{"xref_id":"0019479"}}}


id: PBO:0047272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 247 member D","termid":"PBO:0047272"}


id: GO:0061135
data:
  {"annotated_genes":["SJAG_04633","SJAG_04484","SJAG_04211","SJAG_00460","SJAG_01072","SJAG_04398"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74592,78524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061133"},{"annotations":[103594,117129,66541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004866"},{"annotations":[93529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004867"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a peptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase regulator activity","termid":"GO:0061134"},{"relation_name":"regulates","term_name":"endopeptidase activity","termid":"GO:0004175"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_01072":null,"SJAG_04211":null,"SJAG_04398":null,"SJAG_04484":null,"SJAG_04633":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"regulates","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0098772","GO:0030234","GO:0140096","GO:0008233","GO:0003824"],"is_obsolete":false,"name":"endopeptidase regulator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0061135","terms_by_termid":{"GO:0004866":null,"GO:0004867":null,"GO:0061133":null}}


id: PBO:0030913
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_process_during_vegetative_growth","termid":"PBO:0030913"}


id: MONDO:0003046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the anal canal or anal margin. Representative examples of benign neoplasms include squamous papilloma and papillary hidradenoma. Representative examples of malignant neoplasms include carcinoma, lymphoma, and melanoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal neoplasm","termid":"MONDO:0002165"},{"relation_name":"is_a","term_name":"anus disorder","termid":"MONDO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"anus neoplasm","secondary_identifiers":["SCTID:126849006","DOID:4551","UMLS:C0003463","EFO:0003835","MESH:D001005","MEDGEN:360","NCIT:C2877"],"synonyms":[{"name":"anal neoplasm","type":"exact"},{"name":"anal neoplasms, benign and malignant","type":"exact"},{"name":"anal tumor","type":"exact"},{"name":"anal tumors","type":"exact"},{"name":"anal tumour","type":"exact"},{"name":"anal tumours","type":"exact"},{"name":"anus neoplasm","type":"exact"},{"name":"anus neoplasm (disease)","type":"exact"},{"name":"anus tumor","type":"exact"},{"name":"anus tumour","type":"exact"},{"name":"neoplasm of anus","type":"exact"},{"name":"neoplasm of the anus","type":"exact"},{"name":"tumor of anus","type":"exact"},{"name":"tumor of the anus","type":"exact"},{"name":"tumour of anus","type":"exact"},{"name":"tumour of the anus","type":"exact"}],"termid":"MONDO:0003046","xrefs":{"Monarch":{"xref_id":"0003046"}}}


id: PBO:0081273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 37B, pseudogene","termid":"PBO:0081273"}


id: GO:2001236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic signaling pathway","termid":"GO:2001233"},{"relation_name":"regulates","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of extrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of extrinsic apoptosis","type":"narrow"},{"name":"regulation of extrinsic apoptotic signalling pathway","type":"exact"}],"termid":"GO:2001236"}


id: PBO:0086731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant displays elevated sensitivity to expression of a mutant huntingtin fragment or of alpha-synuclein; YGL262W is not an essential gene","termid":"PBO:0086731"}


id: GO:0160118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine(7) in tRNA + S-adenosyl-L-methionine = H+ + N(2)-methylguanosine(7) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:34669960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0003674","GO:0140098","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"tRNA (guanine(7)-N2)-methyltransferase activity","termid":"GO:0160118"}


id: GO:0071015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the cooperative binding of the heterodimeric U11/U12 snRNP to the 5' splice site and the branch point sequence. The U12-type prespliceosome includes many proteins in addition to those found in the U11/U12 heterodimeric snRNPs. Commitment to a given pair of 5' and 3' splice sites occurs at the time of prespliceosome formation.","definition_xrefs":["GOC:mah","GOC:krc","GOC:ab","PMID:10197985","PMID:16201866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U12-type spliceosomal complex","termid":"GO:0005689"},{"relation_name":"is_a","term_name":"prespliceosome","termid":"GO:0071010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U12-type prespliceosome","synonyms":[{"name":"AT-AC prespliceosome","type":"narrow"},{"name":"mammalian U12-type spliceosomal complex A","type":"narrow"},{"name":"minor prespliceosome","type":"exact"},{"name":"yeast U12-type spliceosomal complex B","type":"narrow"}],"termid":"GO:0071015"}


id: PBO:0077961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 14-2","termid":"PBO:0077961"}


id: GO:0080168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of abscisic acid into, out of, within or between cells by means of some external agent such as a transporter or pore.","definition_xrefs":["PMID:20133881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"abscisic acid transport","termid":"GO:0080168"}


id: PBO:0073284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 5","termid":"PBO:0073284"}


id: MONDO:1011323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic disease, non-human animal","termid":"MONDO:1011323","xrefs":{"Monarch":{"xref_id":"1011323"}}}


id: PBO:0017413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-precedes","termid":"PBO:0017413"}


id: MONDO:0030843
data:
  {"annotated_genes":["SJAG_02187"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86048],"is_not":false,"summary":null,"term":"MONDO:0030843"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair cancer syndrome","termid":"MONDO:0031219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"mismatch repair cancer syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1745382","OMIM:619101","UMLS:C5436817","GARD:18364"],"synonyms":[{"name":"MMRCS4","type":"exact"},{"name":"mismatch repair cancer syndrome 4","type":"exact"}],"termid":"MONDO:0030843","terms_by_termid":{"MONDO:0030843":null},"xrefs":{"Monarch":{"xref_id":"0030843"}}}


id: PBO:0059447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb/SANT DNA binding domain containing 1","termid":"PBO:0059447"}


id: PBO:0091499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome inhibitor Fub1","termid":"PBO:0091499"}


id: MONDO:1012329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"laminitis, non-human animal","termid":"MONDO:1011767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminitis, ass","secondary_identifiers":["OMIA:001225-9793"],"termid":"MONDO:1012329","xrefs":{"Monarch":{"xref_id":"1012329"}}}


id: MONDO:0023076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eosinophilic pustular folliculitis (EPF) is a skin disorder characterized by recurring itchy, red or skin-colored bumps and pustules (bumps containing pus). The condition is named after the fact that skin biopsies of this disorder find eosinophils (a type of immune cell) around hair follicles. The papules mostly appear on the face, scalp, neck and trunk and may persist for weeks or months. EPF affects males more than females.There are several variants of EPF includingclassic eosinophilic pustular folliculitis (mainly occurring in adults in Japan); HIV-associated EPF, also referred to as immunosuppression-associated EPF; and infantile EPF (with onset from birth or within the first year of life). Whether these are distinct disorders rather than variants of one disorder is controversial, partly because the underlying cause of EFP is not known.Several treatments have been described with variable results, including various oral or topical medications and phototherapy. In patients with HIV-associated disease, antiretroviral therapy tends to greatly diminish symptoms or even eliminate the condition.","definition_xrefs":["GARD:0008534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folliculitis","termid":"MONDO:0006552"},{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"eosinophilic pustular folliculitis","secondary_identifiers":["icd11.foundation:1653155576","SCTID:95333004","UMLS:C0406305","GARD:8534","MEDGEN:140800","MESH:C535953","ICD9:704.8"],"synonyms":[{"name":"EPF","type":"related"},{"name":"Ofuji disease","type":"related"},{"name":"Ofuji's disease","type":"related"},{"name":"eosinophilic folliculitis","type":"related"},{"name":"eosinophilic folliculitis, pustular","type":"related"}],"termid":"MONDO:0023076","xrefs":{"Monarch":{"xref_id":"0023076"}}}


id: PBO:0075879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL5 antisense RNA 1 (head to head)","termid":"PBO:0075879"}


id: PBO:0116468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHE domain cation binding protein, implicated in the repair of iron-sulfur clusters damaged by oxidative and nitrosative stress","termid":"PBO:0116468"}


id: GO:0120066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within gastric smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the distal part of the pylorus between the pyloric antrum and the pyloric sphincter.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach pylorus smooth muscle contraction","termid":"GO:0120064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyloric canal smooth muscle contraction","termid":"GO:0120066"}


id: PBO:0068132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 439","termid":"PBO:0068132"}


id: GO:0001083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor, which may be a single protein or a complex, in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase II basal transcription factor binding (obsolete GO:0001083)","synonyms":[{"name":"RNA polymerase II basal transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0001083"}


id: GO:0120122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prolactin, a protein hormone of the anterior pituitary gland that promotes lactation in response to the suckling stimulus of hungry young mammals.","definition_xrefs":["PMID:11015620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prolactin metabolic process","synonyms":[{"name":"prolactin metabolism","type":"exact"}],"termid":"GO:0120122"}


id: GO:0023009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal causes activation of T cell receptor signaling.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete initiation of T cell receptor signaling (obsolete GO:0023009)","synonyms":[{"name":"initiation of T cell receptor signaling","type":"exact"},{"name":"initiation of T cell receptor signalling","type":"exact"}],"termid":"GO:0023009"}


id: GO:1901047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of the insulin receptor binding to insulin that controls viability and duration in the adult phase of the life-cycle.","definition_xrefs":["GOC:kmv","PMID:9360933","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete insulin receptor signaling pathway involved in determination of adult lifespan (obsolete GO:1901047)","synonyms":[{"name":"daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"insulin receptor signalling pathway of determination of adult lifespan","type":"exact"}],"termid":"GO:1901047"}


id: PATO:0001801
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the reduction in amount of water the bearer contains.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Dehydrated"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"water composition","termid":"PATO:0001800"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased water composition","synonyms":[{"name":"dehydrated","type":"exact"},{"name":"dry","type":"related"}],"termid":"PATO:0001801"}


id: GO:1901931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alpha-copaene.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene biosynthetic process","termid":"GO:0051762"},{"relation_name":"is_a","term_name":"alpha-copaene metabolic process","termid":"GO:1901929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"alpha-copaene biosynthetic process","synonyms":[{"name":"alpha-copaene anabolism","type":"exact"},{"name":"alpha-copaene biosynthesis","type":"exact"},{"name":"alpha-copaene formation","type":"exact"},{"name":"alpha-copaene synthesis","type":"exact"}],"termid":"GO:1901931"}


id: PBO:0076302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNGAP1 antisense RNA 1","termid":"PBO:0076302"}


id: FYECO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing sucrose, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose MM","synonyms":[{"name":"fructose minimal medium","type":"exact"}],"termid":"FYECO:0000382"}


id: GO:0047507
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004798"},{"annotations":[118332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120136"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxyribonucleoside 5'-phosphate + ATP = a 2'-deoxyribonucleoside 5'-diphosphate + ADP.","definition_xrefs":["RHEA:11216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"deoxynucleoside-phosphate kinase activity, ATP as phosphate donor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:DEOXYNUCLEOSIDE-PHOSPHATE-KINASE-RXN","EC:2.7.4.13"],"synonyms":[{"name":"ATP:deoxynucleoside-phosphate phosphotransferase activity","type":"related"},{"name":"deoxynucleoside monophosphate kinase activity","type":"related"},{"name":"deoxynucleoside-5'-monophosphate kinase activity","type":"related"},{"name":"deoxynucleoside-phosphate kinase activity","type":"broad"},{"name":"deoxyribonucleoside monophosphokinase activity","type":"related"}],"termid":"GO:0047507","terms_by_termid":{"GO:0004798":null,"GO:0120136":null}}


id: FYPO:0003938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is increased relative to normal under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth","termid":"FYPO:0003937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"increased cell population growth during glucose starvation","synonyms":[{"name":"fast cell population growth during glucose starvation","type":"narrow"},{"name":"increased cell population growth during glucose depletion","type":"exact"},{"name":"increased cell population growth during glucose deprivation","type":"exact"},{"name":"increased cell population growth during glucose limitation","type":"related"},{"name":"increased cell population growth in response to glucose starvation","type":"exact"},{"name":"resistant to glucose starvation","type":"related"}],"termid":"FYPO:0003938"}


id: GO:0019706
data:
  {"annotated_genes":["SJAG_04451","SJAG_01112","SJAG_00895","SJAG_01299"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68271,71458,73328,75370],"is_not":false,"summary":null,"term":"GO:0019706"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl (systematic name, hexadecanoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction hexadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-hexadecanoyl-L-cysteinyl-[protein].","definition_xrefs":["RHEA:36683","GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoyltransferase activity","termid":"GO:0016409"},{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00895":null,"SJAG_01112":null,"SJAG_01299":null,"SJAG_04451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"protein-cysteine S-palmitoyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-203567","Reactome:R-HSA-9830875","Reactome:R-HSA-9694341","Reactome:R-HSA-9647982","Reactome:R-HSA-9829047","Reactome:R-HSA-5682084","Reactome:R-HSA-9021072","EC:2.3.1.225"],"synonyms":[{"name":"protein-cysteine S-palmitoleyltransferase activity","type":"related"}],"termid":"GO:0019706","terms_by_termid":{"GO:0019706":null}}


id: MONDO:0013076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attention deficit-hyperactivity disorder, susceptibility to, 7","secondary_identifiers":["MEDGEN:416637","OMIM:613003","UMLS:C2751802"],"synonyms":[{"name":"ADHD7","type":"exact"},{"name":"attention Deficit-hyperactivity disorder, susceptibility to, type 7","type":"exact"},{"name":"attention deficit-hyperactivity disorder, susceptibility to, 7","type":"exact"},{"name":"susceptibility to attention deficit-hyperactivity disorder 7","type":"related"}],"termid":"MONDO:0013076","xrefs":{"Monarch":{"xref_id":"0013076"}}}


id: GO:0036100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"leukotriene catabolic process","synonyms":[{"name":"leukotriene breakdown","type":"exact"},{"name":"leukotriene catabolism","type":"exact"},{"name":"leukotriene degradation","type":"exact"}],"termid":"GO:0036100"}


id: MONDO:0100589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital disorder of glycosylation in which the cause of the disease is a mutation in ALG10.","definition_xrefs":["PMID:33798445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"ALG10-congenital disorder of glycosylation","synonyms":[{"name":"ALG10-CDG","type":"exact"},{"name":"ALG10-congenital disorder of glycosylation","type":"exact"}],"termid":"MONDO:0100589","xrefs":{"Monarch":{"xref_id":"0100589"}}}


id: MONDO:0005981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paralysis caused by a neurotropic toxin secreted by the salivary glands of ticks.","definition_xrefs":["MESH:D013985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tick infestation","termid":"MONDO:0005980"},{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tick paralysis","secondary_identifiers":["UMLS:C0040197","MEDGEN:52752","DOID:11285","EFO:0007509","GARD:7771","SCTID:74225001"],"termid":"MONDO:0005981","xrefs":{"Monarch":{"xref_id":"0005981"}}}


id: PBO:0062215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AL member 2 pseudogene","termid":"PBO:0062215"}


id: PBO:0057958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3680-2","termid":"PBO:0057958"}


id: GO:2001177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mediator complex assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of mediator complex assembly","termid":"GO:2001176"},{"relation_name":"negatively_regulates","term_name":"mediator complex assembly","termid":"GO:0036034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mediator complex assembly","termid":"GO:2001177"}


id: GO:0034366
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mature high-density lipoprotein (HDL) particle, converted from discoidal HDL particles following the esterification of cholesterol in the particle by phosphatidylcholine-sterol O-acyltransferase (lecithin cholesterol acyltransferase; LCAT).","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl","GOC:expert_pt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-density lipoprotein particle","termid":"GO:0034364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"spherical high-density lipoprotein particle","synonyms":[{"name":"mature HDL","type":"exact"},{"name":"mature high-density lipoprotein particle","type":"exact"},{"name":"spherical HDL","type":"exact"}],"termid":"GO:0034366"}


id: PBO:0051694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit C","termid":"PBO:0051694"}


id: PBO:0036207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_metaphase_chromosome_recapture","termid":"PBO:0036207"}


id: PBO:0090944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-FO ATP synthase chaperone Atp11","termid":"PBO:0090944"}


id: GO:0047496
data:
  {"annotated_genes":["SJAG_02651","SJAG_00594"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104861,105192],"is_not":false,"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"The directed movement of a vesicle along a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.","definition_xrefs":["GOC:rl","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"},{"relation_name":"is_a","term_name":"vesicle cytoskeletal trafficking","termid":"GO:0099518"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00594":null,"SJAG_02651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"vesicle transport along microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule-based vesicle localization","type":"exact"}],"termid":"GO:0047496","terms_by_termid":{"GO:0047496":null}}


id: PBO:0012832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Septum Promoting GTPase","termid":"PBO:0012832"}


id: GO:0055037
data:
  {"annotated_genes":["SJAG_01448","SJAG_03915","SJAG_04343"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71422,77856,102975],"is_not":false,"summary":null,"term":"GO:0055037"}]},"cv_name":"cellular_component","definition":"An organelle consisting of a network of tubules that functions in targeting molecules, such as receptors transporters and lipids, to the plasma membrane.","definition_xrefs":["PMID:21556374","PMID:21562044","GOC:kmv","GOC:jid","GOC:rph","GOC:dph","PMID:10930469","PMID:16246101","PMID:15601896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01448":null,"SJAG_03915":null,"SJAG_04343":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005768","GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"recycling endosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ERC","type":"related"},{"name":"endosomal recycling compartment","type":"exact"},{"name":"endosome recycling compartment","type":"related"}],"termid":"GO:0055037","terms_by_termid":{"GO:0055037":null}}


id: SO:0001517
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a region of a chromosome is changed to the reverse order without duplication or deletion.","direct_ancestors":[{"relation_name":"is_a","term_name":"alteration_attribute","termid":"SO:0001508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_attribute","synonyms":[{"name":"inversion attribute","type":"exact"}],"termid":"SO:0001517"}


id: SOFP:keywords
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keywords","termid":"SOFP:keywords"}


id: PBO:0048875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member A","termid":"PBO:0048875"}


id: SO:0000568
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter that can allow for transcription in both directions.","definition_xrefs":["SO:ke","PMID:21601935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional_promoter","synonyms":[{"name":"bidirectional promoter","type":"exact"}],"termid":"SO:0000568"}


id: GO:0001664
data:
  {"annotated_genes":["SJAG_02444","SJAG_02233"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74634,80720],"is_not":false,"summary":null,"term":"GO:0001664"}]},"cv_name":"molecular_function","definition":"Binding to a G protein-coupled receptor.","definition_xrefs":["GOC:ceb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02233":null,"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled receptor binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-500717"],"synonyms":[{"name":"G protein coupled receptor binding","type":"exact"},{"name":"G protein coupled receptor ligand","type":"narrow"},{"name":"G-protein coupled receptor binding","type":"exact"},{"name":"G-protein-coupled receptor ligand","type":"narrow"}],"termid":"GO:0001664","terms_by_termid":{"GO:0001664":null}}


id: PBO:0090713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX2 complex subunit Sac3","termid":"PBO:0090713"}


id: MONDO:0019309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Late-onset junctional epidermolysis bullosa is a subtype of junctional epidermolysis bullosa (JEB) occurring in childhood or young adulthood.","definition_xrefs":["Orphanet:79406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"late-onset junctional epidermolysis bullosa","secondary_identifiers":["MEDGEN:930393","GARD:12921","SCTID:719432000","UMLS:C4304724"],"synonyms":[{"name":"EB progressive","type":"exact"},{"name":"JEB-lo","type":"exact"}],"termid":"MONDO:0019309","xrefs":{"Monarch":{"xref_id":"0019309"}}}


id: PBO:0001055
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.3","termid":"PBO:0001055"}


id: GO:1901265
data:
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id: PBO:0074947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 111","termid":"PBO:0074947"}


id: GO:0009159
data:
  {"annotated_genes":["SJAG_01974","SJAG_01055"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76131,117479],"is_not":false,"summary":null,"term":"GO:0009159"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a deoxyribonucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate catabolic process","termid":"GO:0009125"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009162"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_01974":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"deoxyribonucleoside monophosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleoside monophosphate breakdown","type":"exact"},{"name":"deoxyribonucleoside monophosphate catabolism","type":"exact"},{"name":"deoxyribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009159","terms_by_termid":{"GO:0009159":null}}


id: PBO:0038375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_negatively_regulated_by","termid":"PBO:0038375"}


id: PBO:0042543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 8 pseudogene 2","termid":"PBO:0042543"}


id: MONDO:0014805
data:
  {"annotated_genes":["SJAG_00573","SJAG_03686"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86158,86159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958071"}]},"cv_name":"mondo","definition":"A rare genetic intellectual disability syndrome characterized by global developmental delay, intellectual disability, severe speech delay, behavioral abnormalities (including impulsivity, compulsivity, stubbornness, manipulative behaviors, temper tantrums, and aggressive behaviors), autism spectrum disorder and mild and variable dysmorphic facies (including deep-set eyes and a prominent nasal septum, extending below the alae nasi) due to point mutation of USP7 gene or 16p13.2 microdeletion where USP7 is completely or partially deleted. Behavioral abnormalities are more pronounced in microdeletion. Patients may also have hypotonia, feeding problems, delayed walking with unsteady gait, hypogonadism in males, seizures and ocular anomalies (such as myopia, estropia, strabismus, and nystagmus).","definition_xrefs":["Orphanet:643549"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_03686":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Hao-Fountain syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5393908","MEDGEN:1719035","NORD:1917"],"synonyms":[{"name":"HAFOUS","type":"exact"},{"name":"USP7-Related Diseases","type":"exact"}],"termid":"MONDO:0014805","terms_by_termid":{"MONDO:0958071":null},"xrefs":{"Monarch":{"xref_id":"0014805"}}}


id: PBO:0046992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 88 member C","termid":"PBO:0046992"}


id: GO:1900769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fonsecin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"fonsecin metabolic process","termid":"GO:1900767"},{"relation_name":"is_a","term_name":"naphtho-gamma-pyrone biosynthetic process","termid":"GO:1900787"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fonsecin biosynthetic process","synonyms":[{"name":"fonsecin anabolism","type":"exact"},{"name":"fonsecin biosynthesis","type":"exact"},{"name":"fonsecin formation","type":"exact"},{"name":"fonsecin synthesis","type":"exact"}],"termid":"GO:1900769"}


id: PBO:0083137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity ser/thr and tyrosine protein kinase; roles in chromosome segregation, meiotic entry, genome stability, phosphorylation-dependent protein degradation (Rcn1p and Cdc6p), inhibition of protein kinase A, transcriptional regulation, inhibition of RNA pol III, calcium stress and inhibition of Clb2p-Cdc28p after nuclear division; MCK1 has a paralog, YGK3, that arose from the whole genome duplication","termid":"PBO:0083137"}


id: GO:1902601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of silver (Ag+) ions across a membrane.","definition_xrefs":["GOC:pr","GO_REF:0000069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silver ion transport","termid":"GO:0015673"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"silver ion transmembrane transport","synonyms":[{"name":"silver transmembrane transport","type":"broad"}],"termid":"GO:1902601"}


id: PBO:0004143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 5-kinase Fab1","termid":"PBO:0004143"}


id: PBO:0054222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1603","termid":"PBO:0054222"}


id: PBO:0058847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8076","termid":"PBO:0058847"}


id: PBO:0051622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILF3 divergent transcript","termid":"PBO:0051622"}


id: PATO:0001677
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An efficiency quality inhering in a bearer by virtue of the bearer's lacking efficiency.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"efficiency","termid":"PATO:0001029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inefficient","termid":"PATO:0001677"}


id: GO:0016032
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66034],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0075523"}]},"cv_name":"biological_process","definition":"A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.","definition_xrefs":["GOC:bf","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral process","references_by_uniquename":{"GO_REF:0000043":null},"secondary_identifiers":["GO:0022415","Wikipedia:Viral_life_cycle","Reactome:R-HSA-162906"],"synonyms":[{"name":"viral infection","type":"related"},{"name":"virulence","type":"related"},{"name":"virus process","type":"exact"}],"termid":"GO:0016032","terms_by_termid":{"GO:0075523":null}}


id: MONDO:0800136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-severe combined immunodeficiency caused by a deficiency in the COPG1 gene.","definition_xrefs":["PMID:33529166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"non-severe combined immunodeficiency due to COPG1 deficiency","termid":"MONDO:0800136","xrefs":{"Monarch":{"xref_id":"0800136"}}}


id: GO:0044809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 17 (CCL17) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 17 production","synonyms":[{"name":"CCL17 production","type":"exact"},{"name":"TARC production","type":"exact"},{"name":"thymus and activation regulated chemokine production","type":"exact"}],"termid":"GO:0044809"}


id: MONDO:0007199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blepharochalasis, superior","secondary_identifiers":["MESH:C566223","UMLS:C1862275","MEDGEN:349465","OMIM:110000"],"synonyms":[{"name":"blepharochalasis, superior","type":"exact"}],"termid":"MONDO:0007199","xrefs":{"Monarch":{"xref_id":"0007199"}}}


id: MONDO:0957561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalopathy, acute, infection-induced","termid":"MONDO:0000166"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"encephalitis, acute, infection-induced, susceptibility to","termid":"MONDO:0800174"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalitis, acute, infection-induced, susceptibility to, 12","secondary_identifiers":["MEDGEN:1846830","OMIM:620461","UMLS:C5882673"],"termid":"MONDO:0957561","xrefs":{"Monarch":{"xref_id":"0957561"}}}


id: PBO:0062023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily M member 4","termid":"PBO:0062023"}


id: GO:1901233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of convergent extension involved in axis elongation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in axis elongation","termid":"GO:1901232"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"convergent extension involved in axis elongation","termid":"GO:0060028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of convergent extension involved in axis elongation","synonyms":[{"name":"down regulation of convergent extension involved in axis elongation","type":"exact"},{"name":"down-regulation of convergent extension involved in axis elongation","type":"exact"},{"name":"downregulation of convergent extension involved in axis elongation","type":"exact"},{"name":"inhibition of convergent extension involved in axis elongation","type":"narrow"}],"termid":"GO:1901233"}


id: SO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is tri-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K27_methylation_site","termid":"SO:0001732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_trimethylation_site","synonyms":[{"name":"H3K27 tri-methylation site","type":"exact"},{"name":"H3K27Me3","type":"related"}],"termid":"SO:0001709"}


id: PBO:0077907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosylprotein sulfotransferase 2 pseudogene 1","termid":"PBO:0077907"}


id: GO:0034015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ribulose 5-phosphate = L-xylulose 5-phosphate.","definition_xrefs":["EC:5.1.3.22","RHEA:18497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"L-ribulose-5-phosphate 3-epimerase activity","secondary_identifiers":["MetaCyc:LXULRU5P-RXN"],"synonyms":[{"name":"L-xylulose 5-phosphate 3-epimerase activity","type":"related"},{"name":"SgaU","type":"related"},{"name":"UlaE","type":"related"}],"termid":"GO:0034015"}


id: GO:0097703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to pulsatile fluid shear stress that occurs at the level of a cell.","definition_xrefs":["PMID:21768538","GOC:bc","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fluid shear stress","termid":"GO:0071498"},{"relation_name":"is_a","term_name":"response to pulsatile fluid shear stress","termid":"GO:0097701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to pulsatile fluid shear stress","termid":"GO:0097703"}


id: MONDO:0007422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratoderma hereditarium mutilans","secondary_identifiers":["MEDGEN:78579","Orphanet:494","UMLS:C0265964","MESH:C536457","OMIM:124500","GARD:3092","DOID:0111339","SCTID:24559001","ICD9:757.39"],"synonyms":[{"name":"KHM","type":"related"},{"name":"PPK mutilans and deafness","type":"exact"},{"name":"VOWNKL","type":"related"},{"name":"Vohwinkel syndrome","type":"exact"},{"name":"deafness, congenital, with KERATOPACHYDERMIA and constrictions of fingers and toes","type":"related"},{"name":"keratoderma hereditarium mutilans","type":"exact"},{"name":"mutilating keratoderma","type":"related"},{"name":"mutilating keratoderma of Vohwinkel","type":"exact"},{"name":"mutilating keratoderma plus deafness","type":"exact"}],"termid":"MONDO:0007422","xrefs":{"Monarch":{"xref_id":"0007422"}}}


id: GO:0035407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an phosphate group to a threonine residue at position 11 of the histone.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-T11 phosphorylation (obsolete GO:0035407)","termid":"GO:0035407"}


id: GO:0005575
data:
  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