# terms

id: PBO:0040917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 21","termid":"PBO:0040917"}


id: GO:1901470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of syringal lignin catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of syringal lignin catabolic process","termid":"GO:1901469"},{"relation_name":"negatively_regulates","term_name":"syringal lignin catabolic process","termid":"GO:1901065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of syringal lignin catabolic process","synonyms":[{"name":"down regulation of S-lignin catabolic process","type":"exact"},{"name":"down regulation of syringal lignin breakdown","type":"exact"},{"name":"down regulation of syringal lignin catabolic process","type":"exact"},{"name":"down regulation of syringal lignin catabolism","type":"exact"},{"name":"down regulation of syringal lignin degradation","type":"exact"},{"name":"down-regulation of S-lignin catabolic process","type":"exact"},{"name":"down-regulation of syringal lignin breakdown","type":"exact"},{"name":"down-regulation of syringal lignin catabolic process","type":"exact"},{"name":"down-regulation of syringal lignin catabolism","type":"exact"},{"name":"down-regulation of syringal lignin degradation","type":"exact"},{"name":"downregulation of S-lignin catabolic process","type":"exact"},{"name":"downregulation of syringal lignin breakdown","type":"exact"},{"name":"downregulation of syringal lignin catabolic process","type":"exact"},{"name":"downregulation of syringal lignin catabolism","type":"exact"},{"name":"downregulation of syringal lignin degradation","type":"exact"},{"name":"inhibition of S-lignin catabolic process","type":"exact"},{"name":"inhibition of syringal lignin breakdown","type":"exact"},{"name":"inhibition of syringal lignin catabolic process","type":"narrow"},{"name":"inhibition of syringal lignin catabolism","type":"exact"},{"name":"inhibition of syringal lignin degradation","type":"exact"},{"name":"negative regulation of S-lignin catabolic process","type":"exact"},{"name":"negative regulation of syringal lignin breakdown","type":"exact"},{"name":"negative regulation of syringal lignin catabolism","type":"exact"},{"name":"negative regulation of syringal lignin degradation","type":"exact"}],"termid":"GO:1901470"}


id: GO:0016861
data:
  {"annotated_genes":["SJAG_00070","SJAG_01455","SJAG_03614","SJAG_02648","SJAG_01346","SJAG_00839","SJAG_04192"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003949"},{"annotations":[70443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004347"},{"annotations":[78360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004476"},{"annotations":[79585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004640"},{"annotations":[74876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004751"},{"annotations":[77264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046523"},{"annotations":[72455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004807"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor, which is an aldose or a ketose, are the same molecule, and no oxidized product appears.","definition_xrefs":["EC:5.3.1.-","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00839":null,"SJAG_01346":null,"SJAG_01455":null,"SJAG_02648":null,"SJAG_03614":null,"SJAG_04192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"intramolecular isomerase activity, interconverting aldoses and ketoses","type":"exact"}],"termid":"GO:0016861","terms_by_termid":{"GO:0003949":null,"GO:0004347":null,"GO:0004476":null,"GO:0004640":null,"GO:0004751":null,"GO:0004807":null,"GO:0046523":null}}


id: GO:0003404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the formation and shaping of the optic vesicle. This process begins with the specific processes that contribute to the appearance of the vesicle and ends when the vesicle has evaginated. The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"embryonic camera-type eye morphogenesis","termid":"GO:0048596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic vesicle morphogenesis","termid":"GO:0003404"}


id: PBO:0050979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 25","termid":"PBO:0050979"}


id: PBO:0074570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 26","termid":"PBO:0074570"}


id: MONDO:0017303
data:
  {"annotated_genes":["SJAG_03025","SJAG_03145","SJAG_03379","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008070"},{"annotations":[85690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800341"},{"annotations":[85516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012239"},{"annotations":[87074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009725"},{"annotations":[86219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012538"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03025":null,"SJAG_03145":null,"SJAG_03379":null,"SJAG_04887":null},"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of tropomyosin","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:284790","UMLS:C5681012","GARD:21123","MEDGEN:1842978"],"termid":"MONDO:0017303","terms_by_termid":{"MONDO:0008070":null,"MONDO:0009725":null,"MONDO:0012239":null,"MONDO:0012538":null,"MONDO:0800341":null},"xrefs":{"Monarch":{"xref_id":"0017303"}}}


id: GO:0061558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a cranial ganglion to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion maturation","termid":"GO:0061553"},{"relation_name":"part_of","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion maturation","synonyms":[{"name":"cranial ganglia maturation","type":"related"}],"termid":"GO:0061558"}


id: PBO:0050196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 13","termid":"PBO:0050196"}


id: GO:0022810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the active transport of a solute across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uniporter activity","termid":"GO:0015292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"membrane potential driven uniporter activity","synonyms":[{"name":"porter","type":"broad"}],"termid":"GO:0022810"}


id: PR:P50515
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase 16 kDa proteolipid subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10263:SF2","OMA:SCHPO02061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase 16 kDa proteolipid subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.14","secondary_identifiers":["UniProtKB:P50515"],"synonyms":[{"name":"Spom972h-ATP6V0C","type":"exact"},{"name":"V-ATPase 16 kDa proteolipid subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump 16 kDa proteolipid subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P50515"}


id: MONDO:0004857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of a tendon, usually resulting from an overuse injury. It is characterized by swelling of the tendon, tenderness around the inflamed tendon, and pain while moving the affected area of the body.","definition_xrefs":["NCIT:C97141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"},{"relation_name":"is_a","term_name":"disease of the tendon","termid":"MONDO:0100010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"tendinitis","secondary_identifiers":["SCTID:34840004","UMLS:C0039503","MEDGEN:21094","DOID:971"],"synonyms":[{"name":"inflammation of tendon","type":"exact"},{"name":"tendon inflammation","type":"exact"},{"name":"tendonitis","type":"exact"}],"termid":"MONDO:0004857","xrefs":{"Monarch":{"xref_id":"0004857"}}}


id: FYPO:0005110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal sodium export","synonyms":[{"name":"normal cellular sodium export","type":"exact"},{"name":"normal sodium export during mitotic cell cycle","type":"related"},{"name":"normal sodium export during vegetative growth","type":"exact"},{"name":"normal sodium export from cell","type":"exact"},{"name":"normal sodium ion export","type":"exact"}],"termid":"FYPO:0005110"}


id: MONDO:0015006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 6, generalized, with scarring and hair loss","secondary_identifiers":["OMIM:617294","UMLS:C4310631","Orphanet:508529","GARD:17951","MEDGEN:934598"],"synonyms":[{"name":"EBSSH","type":"exact"},{"name":"epidermolysis bullosa simplex 6, generalized, with scarring and hair loss","type":"exact"},{"name":"epidermolysis bullosa simplex, generalized, with scarring and hair loss","type":"exact"},{"name":"epidermolysis bullosa simplex, generalized, with scarring and hair loss; EBSSH","type":"exact"},{"name":"generalised basal epidermolysis bullosa simplex with skin atrophy, scarring and hair loss","type":"exact"},{"name":"generalized basal epidermolysis bullosa simplex with skin atrophy, scarring and hair loss","type":"exact"}],"termid":"MONDO:0015006","xrefs":{"Monarch":{"xref_id":"0015006"}}}


id: PBO:0079854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B3 (pseudogene)","termid":"PBO:0079854"}


id: PBO:0031743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_invasive_growth_(obsolete_FYPO:0000466)","termid":"PBO:0031743"}


id: PBO:0051126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-4 (pseudogene)","termid":"PBO:0051126"}


id: PBO:0011489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-N, kinetochore protein Mis15","termid":"PBO:0011489"}


id: FYPO:0002110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable tapered cell","termid":"FYPO:0002108"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"viable tapered vegetative cell","synonyms":[{"name":"viable bottle-shaped vegetative cell","type":"exact"},{"name":"viable bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable bottle/skittle vegetative cell","type":"exact"},{"name":"viable skittle-shaped vegetative cell","type":"exact"},{"name":"viable tapered cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002110"}


id: GO:0019510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of S-adenosylhomocysteine, forming homocysteine and then methionine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"purine ribonucleoside catabolic process","termid":"GO:0046130"},{"relation_name":"is_a","term_name":"S-adenosylhomocysteine metabolic process","termid":"GO:0046498"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0055086","GO:0006790"],"is_obsolete":false,"name":"S-adenosylhomocysteine catabolic process","secondary_identifiers":["MetaCyc:ADENOSYLHOMOCYSCAT-PWY"],"synonyms":[{"name":"S-adenosylhomocysteine breakdown","type":"exact"},{"name":"S-adenosylhomocysteine catabolism","type":"exact"},{"name":"S-adenosylhomocysteine degradation","type":"exact"}],"termid":"GO:0019510"}


id: PBO:0000685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRI subfamily","termid":"PBO:0000685"}


id: PBO:0072356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 42","termid":"PBO:0072356"}


id: GO:0005648
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete importin, beta-subunit (obsolete GO:0005648)","synonyms":[{"name":"importin, beta-subunit","type":"exact"},{"name":"karyopherin-beta1","type":"exact"}],"termid":"GO:0005648"}


id: FYPO:0001111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glutathione disulfide (GSSG) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular glutathione disulfide level","synonyms":[{"name":"increased cellular GSSG level","type":"exact"},{"name":"increased cellular glutathione disulfide level during mitotic cell cycle","type":"related"},{"name":"increased cellular glutathione disulfide level during vegetative growth","type":"exact"},{"name":"increased cellular glutathione disulphide level","type":"exact"},{"name":"increased cellular oxidised glutathione level","type":"exact"},{"name":"increased glutathione disulfide accumulation","type":"related"}],"termid":"FYPO:0001111"}


id: PBO:0087093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L8A; required for processing of 27SA3 pre-rRNA to 27SB during assembly of large subunit; binds Domain I of 25S, 5.8 S rRNAs; mutation results in decreased amounts of free 60S subunits; RPL8B has paralog RPL8A from whole genome duplication; RPL8A or RPL8B ribosomes not functionally interchangeable; proportions of Rpl8ap, Rpl8bp in 80S ribosome differ in glucose and glycerol; homologous to mammalian ribosomal protein L7A, no bacterial homolog","termid":"PBO:0087093"}


id: PBO:0056004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3","termid":"PBO:0056004"}


id: MONDO:0004743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serious metabolic condition caused by mutations in the MTHFR gene, medications, or nutritional deficiency. It results in increased levels of homocysteine in the blood. Patients with this condition are at an increased risk for recurrent blood clots formation and cardiovascular accidents.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homocystinuria","termid":"MONDO:0004737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"hyperhomocysteinemia","secondary_identifiers":["MESH:D020138","UMLS:C0598608","NCIT:C84770","MEDGEN:108623","GARD:8230","SCTID:419503008","DOID:9279","OMIM:603174"],"synonyms":[{"name":"homocysteinemia","type":"exact"},{"name":"hyperhomocysteinemia","type":"exact"}],"termid":"MONDO:0004743","xrefs":{"Monarch":{"xref_id":"0004743"}}}


id: PBO:0070325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 14","termid":"PBO:0070325"}


id: PBO:0058855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8084","termid":"PBO:0058855"}


id: GO:0120236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of posttranslational protein translocation through the ER membrane.","definition_xrefs":["GOC:krc","GOC:rn","PMID:32513868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"regulation of post-translational protein targeting to membrane, translocation","termid":"GO:0120235"},{"relation_name":"negatively_regulates","term_name":"post-translational protein targeting to membrane, translocation","termid":"GO:0031204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of post-translational protein targeting to membrane, translocation","synonyms":[{"name":"negative regulation of N-terminal signal peptide-independent translocation into the ER","type":"narrow"},{"name":"negative regulation of SRP-independent endoplasmic reticulum protein-membrane targeting, translocation","type":"narrow"},{"name":"negative regulation of posttranslational endoplasmic reticulum membrane protein translocation","type":"exact"},{"name":"negative regulation of posttranslational protein targeting to membrane, translocation","type":"exact"}],"termid":"GO:0120236"}


id: PBO:0068036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 341","termid":"PBO:0068036"}


id: GO:0102657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-16:0-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:1-2-16:1-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:15579662"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-16:0-monogalactosyldiacylglycerol palmitoyl-lipid 7-desaturase activity (obsolete GO:0102657)","termid":"GO:0102657"}


id: GO:0009368
data:
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id: GO:0000738
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id: GO:0046942
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id: PBO:0064045
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id: PBO:0059285
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id: GO:0051105
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id: PBO:0028613
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id: GO:0016051
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id: GO:0018586
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id: PBO:0082756
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id: PBO:0090870
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id: PBO:0089971
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id: MONDO:0019589
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id: PBO:0073763
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id: PBO:0057139
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id: PR:Q9P6K9
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id: GO:0033624
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id: PBO:0016575
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id: PBO:0031039
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id: MONDO:0017321
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id: MONDO:0015631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2N von Willebrand disease (type 2N VWD) is a subtype of type 2 VWD characterized by a bleeding disorder associated with a marked decrease in the affinity of the Willebrand factor (von Willebrand factor; VWF) for factor VIII (FVIII).","definition_xrefs":["Orphanet:166093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"von Willebrand disease 2","termid":"MONDO:0013304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"von Willebrand disease type 2N","secondary_identifiers":["MEDGEN:266187","NCIT:C131689","UMLS:C1282975","SCTID:359732009","icd11.foundation:1091176565","GARD:17024"],"synonyms":[{"name":"von Willebrand disease Normandy variant","type":"exact"},{"name":"von Willebrand disease, type 2N","type":"exact"}],"termid":"MONDO:0015631","xrefs":{"Monarch":{"xref_id":"0015631"}}}


id: PR:O74690
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snu13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"13 kDa ribonucleoprotein-associated protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.03c","synonyms":[{"name":"Spom972h-snu13","type":"exact"}],"termid":"PR:O74690"}


id: GO:1904908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion, telomeric.","definition_xrefs":["PMID:26373281","GO_REF:0000058","GOC:BHF","GOC:BHF_telomere","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034183"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, telomeric","termid":"GO:1904907"},{"relation_name":"negatively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, telomeric","termid":"GO:0099403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric","synonyms":[{"name":"down regulation of maintenance of mitotic sister chromatid cohesion, telomeric","type":"exact"},{"name":"down regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"down regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"down regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"},{"name":"down-regulation of maintenance of mitotic sister chromatid cohesion, telomeric","type":"exact"},{"name":"down-regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"down-regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"down-regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"},{"name":"downregulation of maintenance of mitotic sister chromatid cohesion, telomeric","type":"exact"},{"name":"downregulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"downregulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"downregulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"},{"name":"inhibition of maintenance of mitotic sister chromatid cohesion, telomeric","type":"narrow"},{"name":"inhibition of maintenance of mitotic sister chromatin cohesion at telomere","type":"narrow"},{"name":"inhibition of maintenance of sister chromatin cohesion at telomere at mitosis","type":"narrow"},{"name":"inhibition of maintenance of telomeric mitotic sister chromatin cohesion","type":"narrow"},{"name":"negative regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"negative regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"}],"termid":"GO:1904908"}


id: PBO:0050622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 14","termid":"PBO:0050622"}


id: GO:1904874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomerase RNA localization to Cajal body.","definition_xrefs":["PMID:25467444","GOC:TermGenie","GOC:BHF","GOC:BHF_telomere","GOC:nc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of telomerase RNA localization to Cajal body","termid":"GO:1904872"},{"relation_name":"positively_regulates","term_name":"telomerase RNA localization to Cajal body","termid":"GO:0090671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of telomerase RNA localization to Cajal body","synonyms":[{"name":"activation of telomerase RNA localization to Cajal body","type":"narrow"},{"name":"up regulation of telomerase RNA localization to Cajal body","type":"exact"},{"name":"up-regulation of telomerase RNA localization to Cajal body","type":"exact"},{"name":"upregulation of telomerase RNA localization to Cajal body","type":"exact"}],"termid":"GO:1904874"}


id: MONDO:0032716
data:
  {"annotated_genes":["SJAG_01059"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86476],"is_not":false,"summary":null,"term":"MONDO:0032716"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01059":null},"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy, acute reversible, with increased urinary alpha-ketoglutarate","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1677730","Orphanet:615964","GARD:18035","OMIM:618384","UMLS:C5193068"],"synonyms":[{"name":"ARLIAK","type":"related"},{"name":"LEUKOENCEPHALOPATHY, ACUTE REVERSIBLE, WITH INCREASED URINARY ALPHA-KETOGLUTARATE","type":"related"},{"name":"acute reversible leukoencephalopathy due to SLC13A3 deficiency","type":"exact"},{"name":"acute reversible leukoencephalopathy due to sodium-dependent dicarboxylate transporter deficiency","type":"exact"},{"name":"acute reversible leukoencephalopathy with increased urinary alpha-ketoglutarate","type":"exact"}],"termid":"MONDO:0032716","terms_by_termid":{"MONDO:0032716":null},"xrefs":{"Monarch":{"xref_id":"0032716"}}}


id: GO:0002464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction to nonself antigens in the periphery.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"},{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral tolerance induction to nonself antigen","termid":"GO:0002464"}


id: PBO:0047600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHIP1A divergent transcript","termid":"PBO:0047600"}


id: PBO:0114134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite transmembrane transporter Ssu1","termid":"PBO:0114134"}


id: GO:0016298
data:
  {"annotated_genes":["SJAG_04973","SJAG_01219","SJAG_02543","SJAG_00321","SJAG_04323","SJAG_03204","SJAG_03604","SJAG_02715","SJAG_01198","SJAG_00199","SJAG_01519","SJAG_02161","SJAG_02487","SJAG_01036","SJAG_02091","SJAG_04292","SJAG_00158","SJAG_02907","SJAG_02100","SJAG_02068","SJAG_02093","SJAG_04790","SJAG_04110","SJAG_04105","SJAG_02089"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99140],"is_not":false,"summary":null,"term":"GO:0016298"},{"annotations":[94263,71155,67843,65172,66318,114367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004622"},{"annotations":[109132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"},{"annotations":[71391,77638,79150,78734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047372"},{"annotations":[98094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034479"},{"annotations":[73145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004435"},{"annotations":[78910,77761,71413,76858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004623"},{"annotations":[78439,76106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004620"},{"annotations":[74692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004630"},{"annotations":[63268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004767"},{"annotations":[75372,77772,75495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004771"},{"annotations":[70095,71877,58489,94264,59967,98792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004806"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a lipid.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00199":null,"SJAG_00321":null,"SJAG_01036":null,"SJAG_01198":null,"SJAG_01219":null,"SJAG_01519":null,"SJAG_02068":null,"SJAG_02089":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02715":null,"SJAG_02907":null,"SJAG_03204":null,"SJAG_03604":null,"SJAG_04105":null,"SJAG_04110":null,"SJAG_04292":null,"SJAG_04323":null,"SJAG_04790":null,"SJAG_04973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"lipase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-163432","Reactome:R-HSA-163402"],"termid":"GO:0016298","terms_by_termid":{"GO:0004435":null,"GO:0004620":null,"GO:0004622":null,"GO:0004623":null,"GO:0004630":null,"GO:0004767":null,"GO:0004771":null,"GO:0004806":null,"GO:0016298":null,"GO:0034479":null,"GO:0047372":null,"GO:0052714":null}}


id: MONDO:0007317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chlorpropamide-alcohol flushing (obsolete MONDO:0007317)","secondary_identifiers":["OMIM:118430"],"synonyms":[{"name":"CHLORPROPAMIDE-alcohol flushing","type":"related"},{"name":"CPAF","type":"related"},{"name":"chlorpropamide-alcohol flushing","type":"exact"}],"termid":"MONDO:0007317","xrefs":{"Monarch":{"xref_id":"0007317"}}}


id: GO:0140979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nucleotides within a cell.","definition_xrefs":["PMID:34880500","PMID:23416111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nucleotide homeostasis","termid":"GO:0140979"}


id: GO:0098623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: SeO3(2-) + 3 NADPH + 5H+ = H2Se +  3NADP+ + 3H2O.","definition_xrefs":["PMID:1321713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"selenite reductase (NADPH) activity","secondary_identifiers":["Reactome:R-HSA-2408558"],"synonyms":[{"name":"selenite reductase activity","type":"exact"}],"termid":"GO:0098623"}


id: PBO:0043867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cereblon","termid":"PBO:0043867"}


id: GO:1902163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator.","definition_xrefs":["GOC:TermGenie","PMID:17719541"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (obsolete GO:1902163)","synonyms":[{"name":"down regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","type":"exact"},{"name":"down-regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","type":"exact"},{"name":"downregulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","type":"exact"},{"name":"inhibition of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","type":"narrow"}],"termid":"GO:1902163"}


id: PR:Q9Y7J3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1778.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7J3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine N-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.07","synonyms":[{"name":"Spom972h-SPBC1778.07","type":"exact"}],"termid":"PR:Q9Y7J3"}


id: GO:0085015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a dormant state is maintained by the symbiont within the host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dormancy maintenance of symbiont in host","synonyms":[{"name":"NRP","type":"exact"},{"name":"non-replicating persistence","type":"exact"}],"termid":"GO:0085015"}


id: PBO:0064032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 66","termid":"PBO:0064032"}


id: PBO:0045529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deltex E3 ubiquitin ligase 2","termid":"PBO:0045529"}


id: PBO:0071379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 2","termid":"PBO:0071379"}


id: PBO:0015659
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific splicing","termid":"PBO:0015659"}


id: FYPO:0002812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycerol measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular glycerol level","synonyms":[{"name":"decreased cellular glycerol level during mitotic cell cycle","type":"related"},{"name":"decreased cellular glycerol level during vegetative growth","type":"exact"},{"name":"decreased glycerol accumulation","type":"related"},{"name":"reduced cellular glycerol level","type":"exact"}],"termid":"FYPO:0002812"}


id: GO:0070438
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that contains the mTOR (mammalian target of rapamycin) serine/threonine kinase, the peptidyl-prolyl cis-trans isomerase FKBP12 (FKBP1A) and rapamycin (sirolimus).","definition_xrefs":["GOC:sl","PMID:20005306","PMID:7822316"],"gene_count":0,"genotype_count":0,"name":"obsolete mTOR-FKBP12-rapamycin complex (obsolete GO:0070438)","synonyms":[{"name":"Fkbp1a-Frap1 complex","type":"narrow"},{"name":"mTOR-FKBP12-rapamycin complex","type":"exact"}],"termid":"GO:0070438"}


id: MONDO:0013157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of FKRP","termid":"MONDO:0016156"},{"relation_name":"is_a","term_name":"muscle-eye-brain disease","termid":"MONDO:0018939"},{"relation_name":"is_a","term_name":"myopathy caused by variation in FKRP","termid":"MONDO:0700066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002320","MONDO:0024322","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A5","secondary_identifiers":["UMLS:C3150413","OMIM:613153","GARD:15625","MEDGEN:461763","DOID:0111241"],"synonyms":[{"name":"MDDGA5","type":"related"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, FKRP-related","type":"related"},{"name":"muscle-eye-brain-FKRP related","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 5","type":"related"}],"termid":"MONDO:0013157","xrefs":{"Monarch":{"xref_id":"0013157"}}}


id: MONDO:0011017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A recessively inherited condition with arrhythmogenic right ventricular dysplasia/cardiomyopathy (ARVD/C) and a cutaneous phenotype, characterized by peculiar wooly hair and palmoplantar keratoderma.","definition_xrefs":["Orphanet:34217"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic hair shaft abnormality (obsolete MONDO:0019282)","termid":"MONDO:0019282"},{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"arrhythmogenic right ventricular cardiomyopathy","termid":"MONDO:0016587"},{"relation_name":"is_a","term_name":"cardioectodermal syndrome","termid":"MONDO:0100080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005267"],"is_obsolete":false,"name":"Naxos disease","secondary_identifiers":["GARD:9795","icd11.foundation:633516876","OMIM:601214","UMLS:C1832600","MEDGEN:321991","DOID:0080551","MESH:C538346","SCTID:715535009"],"synonyms":[{"name":"KWWH type I","type":"exact"},{"name":"Mal De Naxos","type":"related"},{"name":"NAXOS disease","type":"exact"},{"name":"NXD","type":"exact"},{"name":"Naxos disease","type":"exact"},{"name":"cardiomyopathy, arrhythmogenic right ventricular, with skin, hair, and nail abnormalities","type":"related"},{"name":"keratoderma with woolly hair type I","type":"exact"},{"name":"keratoderma with wooly hair type I","type":"exact"},{"name":"keratosis palmoplantaris arrythmogenic cardiomyopathy woolly hair","type":"related"},{"name":"keratosis palmoplantaris arrythmogenic cardiomyopathy wooly hair","type":"related"},{"name":"keratosis palmoplantaris with arrhythmogenic cardiomyopathy","type":"related"},{"name":"keratosis palmoplantaris with arrythmogenic cardiomyopathy","type":"exact"},{"name":"palmoplantar hyperkeratosis with arrythmogenic cardiomyopathy","type":"exact"},{"name":"palmoplantar keratoderma with arrhythmogenic right ventricular cardiomyopathy and woolly hair","type":"related"},{"name":"palmoplantar keratoderma with arrhythmogenic right ventricular cardiomyopathy and wooly hair","type":"related"},{"name":"palmoplantar keratoderma with arrythmogenic cardiomyopathy","type":"exact"},{"name":"woolly hair palmoplantar keratoderma cardiac abnormalities","type":"related"},{"name":"woolly hair, palmoplantar keratoderma, and Cardiac abnormalities","type":"related"},{"name":"wooly hair palmoplantar keratoderma cardiac abnormalities","type":"related"},{"name":"wooly hair, palmoplantar keratoderma, and Cardiac abnormalities","type":"related"}],"termid":"MONDO:0011017","xrefs":{"Monarch":{"xref_id":"0011017"}}}


id: MONDO:0022869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete coronary arteries congenital malformation (obsolete MONDO:0022869)","termid":"MONDO:0022869","xrefs":{"Monarch":{"xref_id":"0022869"}}}


id: GO:1990057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell cycle regulatory process in which the cell cycle is halted during one of the normal phases (G1, S, G2, M) as a result of DNA damage from environmental insults or errors during metabolism.","definition_xrefs":["GOC:rph","PMID:10630641"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cycle arrest in response to DNA damage stimulus (obsolete GO:1990057)","synonyms":[{"name":"cell cycle arrest in response to DNA damage stimulus","type":"exact"}],"termid":"GO:1990057"}


id: GO:0019673
data:
  {"annotated_genes":["SJAG_02648","SJAG_02783","SJAG_00890","SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68586,103401,78359,75825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009298"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP-mannose, a substance composed of mannose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00890":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"GDP-mannose metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"GDP-mannose metabolism","type":"exact"}],"termid":"GO:0019673","terms_by_termid":{"GO:0009298":null}}


id: PBO:0013743
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S pombe Heme Utilization","termid":"PBO:0013743"}


id: PBO:0070388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin associated tail protein 1 like","termid":"PBO:0070388"}


id: MONDO:0000388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anonychia congenita (obsolete MONDO:0000388)","synonyms":[{"name":"hyponychia congenita","type":"exact"}],"termid":"MONDO:0000388","xrefs":{"Monarch":{"xref_id":"0000388"}}}


id: GO:0008851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethanolamine = acetaldehyde + NH3.","definition_xrefs":["EC:4.3.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"ethanolamine ammonia-lyase activity","secondary_identifiers":["MetaCyc:ETHAMLY-RXN","RHEA:15313"],"synonyms":[{"name":"ethanolamine ammonia-lyase (acetaldehyde-forming) activity","type":"related"},{"name":"ethanolamine deaminase activity","type":"related"}],"termid":"GO:0008851"}


id: GO:0038180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by nerve growth factor (NGF) binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:11520933","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin signaling pathway","termid":"GO:0038179"},{"relation_name":"part_of","term_name":"cellular response to nerve growth factor stimulus","termid":"GO:1990090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"nerve growth factor signaling pathway","secondary_identifiers":["Wikipedia:Nerve_growth_factor"],"synonyms":[{"name":"NGF signaling pathway","type":"exact"},{"name":"nerve growth factor signalling pathway","type":"exact"}],"termid":"GO:0038180"}


id: FYPO:0003189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein import into the nucleus is decreased. Import of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nuclear import","termid":"FYPO:0000515"},{"relation_name":"is_a","term_name":"decreased protein transport during vegetative growth","termid":"FYPO:0000541"},{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"},{"relation_name":"is_a","term_name":"abnormal protein import into nucleus during vegetative growth","termid":"FYPO:0003188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein import into nucleus","synonyms":[{"name":"decreased protein import into nucleus during mitotic cell cycle","type":"related"},{"name":"decreased protein import into nucleus during vegetative growth","type":"exact"},{"name":"reduced protein import into nucleus","type":"exact"}],"termid":"FYPO:0003189"}


id: MONDO:0004798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Sheehan syndrome (obsolete MONDO:0004798)","termid":"MONDO:0004798","xrefs":{"Monarch":{"xref_id":"0004798"}}}


id: PBO:0041080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRICK1 pseudogene 1","termid":"PBO:0041080"}


id: RO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x 'has habitat' y if and only if: x is an organism, y is a habitat, and y can sustain and allow the growth of a population of xs.","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_habitat","termid":"RO:0002303"}


id: MONDO:0004246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphatic system disease (obsolete MONDO:0004246)","termid":"MONDO:0004246","xrefs":{"Monarch":{"xref_id":"0004246"}}}


id: PBO:0085950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant exhibits a respiratory growth defect and synthetic interactions with prohibitin (phb1) and gem1; authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085950"}


id: PBO:0113055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of ESCRT-II complex; contains GLUE (GRAM Like Ubiquitin binding in EAP45) domain which is involved in interactions with ESCRT-I and ubiquitin-dependent sorting of proteins into endosome; plays role in lager yeast flocculation under brewing conditions; plays role in formation of mutant huntingtin (Htt) aggregates in yeast","termid":"PBO:0113055"}


id: GO:0030165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a PDZ domain of a protein, a domain found in diverse signaling proteins.","definition_xrefs":["Pfam:PF00595","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"PDZ domain binding","synonyms":[{"name":"DHR-domain binding","type":"exact"},{"name":"GLGF-domain binding","type":"exact"}],"termid":"GO:0030165"}


id: PR:000085717
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-36. Example: UniProtKB:P09988, 2-136, Lys-37, MOD:00663.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:37459529"],"direct_ancestors":[{"relation_name":"has_part","term_name":"methylated lysine","termid":"MOD:00663"},{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Me(K36)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PRO_0000221366, Lys-37, MOD:00663","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/K36Me","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-37, MOD:00663","type":"related"},{"name":"hht1/Me(K36)","type":"exact"}],"termid":"PR:000085717"}


id: PBO:0049679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta","termid":"PBO:0049679"}


id: GO:0021993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which closure points are established at multiple points and along the neural rostrocaudal axis.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"initiation of neural tube closure","termid":"GO:0021993"}


id: PBO:0087336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specific assembly chaperone for ribosomal protein Rpl4a/Rpl4b; associates co-translationally with a evolutionarily conserved internal loop of nascent Rpl4a/b, and is released only after an the eukaryotic-specific extension of nascent Rpl4a/b mediates nuclear import, incorporation into the pre-ribosome and complex disassembly; role in biogenesis of the 60S ribosomal subunit; transcriptionally co-regulated with rRNA and ribosome biosynthesis genes","termid":"PBO:0087336"}


id: MONDO:0016204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic copper-associated cirrhosis is a rare copper-overload liver disease characterized by a rapidly progressive liver cirrhosis from the first few years of life leading to hepatic insufficiency and harboring a specific pathological aspect: pericellular fibrosis, inflammatory infiltration, hepatocyte necrosis, absence of steatosis, poor regeneration and histochemical copper staining.","definition_xrefs":["Orphanet:209919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"idiopathic copper-associated cirrhosis","secondary_identifiers":["GARD:17106","icd11.foundation:1692504835","SCTID:715864007","UMLS:C4274853","MEDGEN:907284"],"synonyms":[{"name":"non-Wilsonian hepatic copper toxicosis of infancy and childhood","type":"exact"}],"termid":"MONDO:0016204","xrefs":{"Monarch":{"xref_id":"0016204"}}}


id: FYECO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which inositol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ inositol","termid":"FYECO:0000064"}


id: GO:0002598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of lipid antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002592"},{"relation_name":"regulates","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"regulation of lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002598"}


id: PBO:0070439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPH3AL antisense RNA 2","termid":"PBO:0070439"}


id: _global:acts_upstream_of,_positive_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c 'acts upstream of, positive effect' p if c is enables f, and f is causally upstream of p, and the direction of f is positive","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"_global:acts_upstream_of"},{"relation_name":"is_a","term_name":"acts_upstream_of_or_within,_positive_effect","termid":"_global:acts_upstream_of_or_within,_positive_effect"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of,_positive_effect","secondary_identifiers":["RO:0004034"],"termid":"_global:acts_upstream_of,_positive_effect"}


id: GO:0015284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fructose(out) = fructose(in).","definition_xrefs":["TC:2.A.1.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"},{"relation_name":"is_a","term_name":"hexose uniporter activity","termid":"GO:0008516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"fructose uniporter activity","termid":"GO:0015284"}


id: PBO:0049205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor kainate type subunit 5","termid":"PBO:0049205"}


id: MONDO:0004494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the testis and is characterized by the presence of hepatoid cells collections.","definition_xrefs":["NCIT:C39931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular yolk sac tumor","termid":"MONDO:0003402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular yolk sac tumor, hepatoid pattern","secondary_identifiers":["MEDGEN:272846","UMLS:C1515306","DOID:8195"],"synonyms":[{"name":"hepatoid pattern testicular yolk sac tumor","type":"related"},{"name":"hepatoid pattern testicular yolk sac tumour","type":"related"},{"name":"testicular yolk sac tumor, hepatoid pattern","type":"exact"}],"termid":"MONDO:0004494","xrefs":{"Monarch":{"xref_id":"0004494"}}}


id: GO:1901279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-ribose 5-phosphate.","definition_xrefs":["UniPathway:UPA00293","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"D-ribose 5-phosphate metabolic process","termid":"GO:1901278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-ribose 5-phosphate catabolic process","synonyms":[{"name":"D-ribose 5-phosphate breakdown","type":"exact"},{"name":"D-ribose 5-phosphate catabolism","type":"exact"},{"name":"D-ribose 5-phosphate degradation","type":"exact"}],"termid":"GO:1901279"}


id: PBO:0041808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 19","termid":"PBO:0041808"}


id: MONDO:0017221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The connatal form of Pelizaeus-Merzbacher disease (PMD) is the most severe form of PMD.","definition_xrefs":["Orphanet:280210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pelizeaus-Merzbacher spectrum disorder","termid":"MONDO:0010714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Pelizaeus-Merzbacher disease, connatal form","secondary_identifiers":["UMLS:C5679776","MEDGEN:1842817","GARD:17291","icd11.foundation:1118374715"],"synonyms":[{"name":"Pelizaeus-Merzbacher disease type II","type":"exact"},{"name":"connatal PMD","type":"exact"},{"name":"severe PMD","type":"exact"}],"termid":"MONDO:0017221","xrefs":{"Monarch":{"xref_id":"0017221"}}}


id: PBO:0048158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 4","termid":"PBO:0048158"}


id: PR:O43058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sep1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead protein sep1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.12","synonyms":[{"name":"Spom972h-sep1","type":"exact"}],"termid":"PR:O43058"}


id: GO:0050134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-methyl-L-lysine + H2O + O2 = L-lysine + formaldehyde + H2O2.","definition_xrefs":["RHEA:23200","EC:1.5.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"N6-methyl-lysine oxidase activity","secondary_identifiers":["MetaCyc:N6-METHYL-LYSINE-OXIDASE-RXN","KEGG_REACTION:R00612"],"synonyms":[{"name":"6-N-methyl-L-lysine:oxygen oxidoreductase (demethylating)","type":"related"},{"name":"N(6)-methyllysine oxidase activity","type":"related"},{"name":"N6-methyl-L-lysine:oxygen oxidoreductase (demethylating)","type":"related"},{"name":"N6-methyllysine oxidase activity","type":"related"},{"name":"epsilon-N-methyllysine demethylase activity","type":"related"},{"name":"epsilon-alkyl-L-lysine:oxygen oxidoreductase activity","type":"related"},{"name":"epsilon-alkyllysinase activity","type":"related"}],"termid":"GO:0050134"}


id: GO:0043929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle), as part of the double layer follicle stage of oogenesis.","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ovarian follicle growth","termid":"GO:0001545"},{"relation_name":"part_of","term_name":"double layer follicle stage","termid":"GO:0048161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth involved in double layer follicle stage","synonyms":[{"name":"primary ovarian follicle growth during double layer follicle stage","type":"related"}],"termid":"GO:0043929"}


id: GO:1902801
data:
  {"annotated_genes":["SJAG_01867","SJAG_01599","SJAG_03624","SJAG_03664","SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92204,97515,100623,118057,118420],"is_not":false,"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of siRNA-independent facultative heterochromatin assembly.","definition_xrefs":["PMID:24210919","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"regulates","term_name":"siRNA-independent facultative heterochromatin formation","termid":"GO:1902794"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01599":null,"SJAG_01867":null,"SJAG_02622":null,"SJAG_03624":null,"SJAG_03664":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"regulation of siRNA-independent facultative heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of heterochromatin island assembly","type":"exact"},{"name":"regulation of heterochromatin island formation","type":"exact"},{"name":"regulation of siRNA-independent facultative heterochromatin assembly","type":"exact"}],"termid":"GO:1902801","terms_by_termid":{"GO:1902801":null}}


id: PBO:0048703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucagon like peptide 2 receptor","termid":"PBO:0048703"}


id: GO:0090361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"platelet-derived growth factor production","termid":"GO:0090360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of platelet-derived growth factor production","termid":"GO:0090361"}


id: PBO:0044082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A1","termid":"PBO:0044082"}


id: PBO:0048880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member F, pseudogene","termid":"PBO:0048880"}


id: MOD:00590
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:15549660","Unimod:270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addtion to cytopiloyne","synonyms":[{"name":"Cytopiloyne","type":"related"},{"name":"nucleophilic addtion to cytopiloyne","type":"related"}],"termid":"MOD:00590"}


id: PR:P58234
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1901 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P58234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S19-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.13","synonyms":[{"name":"S16-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps1901","type":"exact"}],"termid":"PR:P58234"}


id: GO:1901048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription, that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size.","definition_xrefs":["GOC:kmv","PMID:9847239","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in regulation of multicellular organism growth (obsolete GO:1901048)","synonyms":[{"name":"TGF-beta receptor signaling pathway of regulation of body growth","type":"exact"},{"name":"TGF-beta receptor signaling pathway of regulation of body size","type":"exact"},{"name":"TGF-beta receptor signaling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"TGF-beta receptor signalling pathway of regulation of body growth","type":"exact"},{"name":"TGF-beta receptor signalling pathway of regulation of body size","type":"exact"},{"name":"TGF-beta receptor signalling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"TGFbeta receptor signaling pathway of regulation of body growth","type":"exact"},{"name":"TGFbeta receptor signaling pathway of regulation of body size","type":"exact"},{"name":"TGFbeta receptor signaling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"TGFbeta receptor signalling pathway of regulation of body growth","type":"exact"},{"name":"TGFbeta receptor signalling pathway of regulation of body size","type":"exact"},{"name":"TGFbeta receptor signalling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway of regulation of body growth","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway of regulation of body size","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway of regulation of body growth","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway of regulation of body size","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway of regulation of multicellular organism growth","type":"exact"}],"termid":"GO:1901048"}


id: PBO:0040855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridge-like lipid transfer protein family member 1","termid":"PBO:0040855"}


id: GO:0097141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BIM and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BIM-BCL-2 complex","termid":"GO:0097141"}


id: PBO:0046986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member K, pseudogene","termid":"PBO:0046986"}


id: MONDO:1010871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any mucopolysaccharidosis that occurs in dogs due to a mutation in the GUSB gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder, non-human animal","termid":"MONDO:1012581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucopolysaccharidosis, GUSB-related, dog","secondary_identifiers":["OMIA:000667-9615"],"synonyms":[{"name":"mucopolysaccharidosis VII, dog","type":"related"}],"termid":"MONDO:1010871","xrefs":{"Monarch":{"xref_id":"1010871"}}}


id: PBO:0039787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquarius intron-binding spliceosomal factor","termid":"PBO:0039787"}


id: MONDO:0957787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fliedner-Zweier syndrome","secondary_identifiers":["OMIM:620511","MEDGEN:1845438","UMLS:C5882693"],"termid":"MONDO:0957787","xrefs":{"Monarch":{"xref_id":"0957787"}}}


id: GO:0010313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phytochrome.","definition_xrefs":["PMID:15486102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"phytochrome binding","termid":"GO:0010313"}


id: GO:0001147
data:
  {"annotated_genes":["SJAG_04855","SJAG_02242","SJAG_03923"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74619,74694,102601],"is_not":false,"summary":null,"term":"GO:0001147"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of DNA that promotes termination by RNA polymerase. The transcribed region might be described as a gene, cistron, or operon.","definition_xrefs":["PMID:18280161","GOC:txnOH","PMID:18391175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02242":null,"SJAG_03923":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0000976","GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"transcription termination site sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001145","GO:0001148","GO:0001146","GO:0001160"],"synonyms":[{"name":"bacterial-type RNA polymerase termination site sequence-specific DNA binding","type":"narrow"},{"name":"mitochondrial RNA polymerase termination site sequence-specific DNA binding","type":"narrow"},{"name":"mitochondrial RNA polymerase terminator site sequence-specific DNA binding transcription factor activity","type":"narrow"},{"name":"transcription factor activity, mitochondrial RNA polymerase terminator site sequence-specific binding","type":"narrow"},{"name":"transcription termination site DNA binding","type":"related"}],"termid":"GO:0001147","terms_by_termid":{"GO:0001147":null}}


id: PBO:0049501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 8","termid":"PBO:0049501"}


id: MONDO:0016998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete complex chromosomal rearrangement (obsolete MONDO:0016998)","secondary_identifiers":["Orphanet:263708"],"termid":"MONDO:0016998","xrefs":{"Monarch":{"xref_id":"0016998"}}}


id: PR:O74396
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps901 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 9a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.10","synonyms":[{"name":"Spom972h-vps901","type":"exact"},{"name":"vacuolar protein-targeting protein 9a (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74396"}


id: PBO:0071741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 39","termid":"PBO:0071741"}


id: MONDO:0017544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndactyly type 1","termid":"MONDO:0008512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zygodactyly type 3","secondary_identifiers":["MEDGEN:1843229","Orphanet:295191","icd11.foundation:1831534806","UMLS:C5679983","GARD:21215"],"synonyms":[{"name":"SD1, Montagu type","type":"exact"},{"name":"SD1c","type":"exact"},{"name":"Zygodactyly, Montagu type","type":"exact"},{"name":"syndactyly type 1, Montagu type","type":"exact"},{"name":"syndactyly type 1c","type":"exact"}],"termid":"MONDO:0017544","xrefs":{"Monarch":{"xref_id":"0017544"}}}


id: GO:0045254
data:
  {"annotated_genes":["SJAG_02158","SJAG_03064","SJAG_02006","SJAG_00866","SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73113,73745,74981,87766,95341],"is_not":false,"summary":null,"term":"GO:0045254"}]},"cv_name":"cellular_component","definition":"A multi-enzyme complex that catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA. The complex comprises multiple copies of three enzymes referred to as E1, E2 and E3: pyruvate dehydrogenase (E1, which may be a homodimer or a heterotetramer of two alpha and two beta subunits, depending on species), dihydrolipoamide S-acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3). Additional proteins may also be present.","definition_xrefs":["PMID:36863425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoacid dehydrogenase complex","termid":"GO:0045240"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_03064":null,"SJAG_03290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"pyruvate dehydrogenase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0009364","Wikipedia:Pyruvate_dehydrogenase_complex"],"synonyms":[{"name":"pyruvate dehydrogenase complex (lipoamide)","type":"exact"}],"termid":"GO:0045254","terms_by_termid":{"GO:0045254":null}}


id: MONDO:1010086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myeloperoxidase deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloperoxidase deficiency, non-human animal","secondary_identifiers":["OMIA:002028"],"termid":"MONDO:1010086","xrefs":{"Monarch":{"xref_id":"1010086"}}}


id: FYPO:0000656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is abnormal, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding phenotype","termid":"FYPO:0000653"},{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000653"],"is_obsolete":false,"name":"abnormal DNA binding","termid":"FYPO:0000656"}


id: GO:0019630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving quinate, the anion of quinic acid. The acid occurs commonly in plants, either free or as esters, and is used as a medicine.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"quinate metabolic process","synonyms":[{"name":"quinate metabolism","type":"exact"},{"name":"quinic acid metabolic process","type":"exact"},{"name":"quinic acid metabolism","type":"exact"}],"termid":"GO:0019630"}


id: PBO:0049611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 14","termid":"PBO:0049611"}


id: PBO:0077658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 10a","termid":"PBO:0077658"}


id: PBO:0116724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP3CA divergent transcript","termid":"PBO:0116724"}


id: PR:Q9Y805
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor CWC25 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02673","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.05c","secondary_identifiers":["UniProtKB:Q9Y805"],"synonyms":[{"name":"Spom972h-CWC25","type":"exact"},{"name":"complexed with cdc5 protein 25 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y805"}


id: MONDO:0016871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 6 disorder","termid":"MONDO:0700013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 6","secondary_identifiers":["Orphanet:261791","GARD:20794","MEDGEN:1826013","UMLS:C5679654"],"synonyms":[{"name":"partial deletion of chromosome type 6","type":"exact"},{"name":"partial monosomy of chromosome 6","type":"exact"}],"termid":"MONDO:0016871","xrefs":{"Monarch":{"xref_id":"0016871"}}}


id: GO:0015853
data:
  {"annotated_genes":["SJAG_03777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098702"}]},"cv_name":"biological_process","definition":"The directed movement of adenine, 6-aminopurine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transport","termid":"GO:0006863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"adenine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenine transmembrane transport","type":"exact"}],"termid":"GO:0015853","terms_by_termid":{"GO:0098702":null}}


id: MONDO:0002850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm with skeletal muscle differentiation affecting the central nervous system.","definition_xrefs":["NCIT:C5464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system sarcoma","termid":"MONDO:0002217"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central nervous system rhabdomyosarcoma","secondary_identifiers":["UMLS:C1332891","MEDGEN:232043","DOID:4048"],"synonyms":[{"name":"CNS rhabdomyosarcoma","type":"exact"},{"name":"central nervous system rhabdomyosarcoma","type":"exact"},{"name":"central nervous system rhabdomyosarcoma (disease)","type":"exact"},{"name":"rhabdomyosarcoma (disease) of central nervous system","type":"exact"},{"name":"rhabdomyosarcoma of CNS","type":"exact"},{"name":"rhabdomyosarcoma of central nervous system","type":"exact"},{"name":"rhabdomyosarcoma of the CNS","type":"exact"},{"name":"rhabdomyosarcoma of the central nervous system","type":"exact"}],"termid":"MONDO:0002850","xrefs":{"Monarch":{"xref_id":"0002850"}}}


id: PBO:0059138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 5","termid":"PBO:0059138"}


id: PBO:0043658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q3, methyltransferase","termid":"PBO:0043658"}


id: MONDO:0017327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary non-gestational choriocarcinoma of ovary is a rare ovarian germ cell malignant tumor, arising from primordial germ cells, usually presenting with nausea, vomiting, abdominal pain, menstrual irregularities, and characterized by fast growth pattern, metastasis to lung, liver and brain and production of human chorionic gonadotrophin (hCG). It is apparently chemoresistant and has a worse prognosis than gestational choriocarcinoma and hence should be distinguished from the latter by DNA polymorphism.","definition_xrefs":["Orphanet:289356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor of ovary","termid":"MONDO:0018171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"primary non-gestational choriocarcinoma of ovary","secondary_identifiers":["UMLS:C4274424","GARD:21136","MEDGEN:906353","SCTID:716588005"],"synonyms":[{"name":"NGCO","type":"exact"},{"name":"primary non-gestational ovarian choriocarcinoma","type":"exact"}],"termid":"MONDO:0017327","xrefs":{"Monarch":{"xref_id":"0017327"}}}


id: GO:0062148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-gamma-glutamyl-L-propargylglycine + O2 = CO2 + L-gamma-glutamyl-(3R)-L-beta-ethynylserine + succinate.","definition_xrefs":["PMID:30867596","RHEA:59900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-gamma-glutamyl-L-propargylglycine hydroxylase activity","termid":"GO:0062148"}


id: GO:0005863
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils.","definition_xrefs":["ISBN:0815316194","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament","termid":"GO:0032982"},{"relation_name":"is_a","term_name":"myofilament","termid":"GO:0036379"},{"relation_name":"part_of","term_name":"sarcomere","termid":"GO:0030017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"striated muscle myosin thick filament","termid":"GO:0005863"}


id: FYPO:0003040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of RNA splicing is decreased. All RNA splicing may be increased, or splicing of one or more specific RNA molecules may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA splicing","termid":"FYPO:0002915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000294","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA splicing","synonyms":[{"name":"decreased RNA splicing during mitotic cell cycle","type":"related"},{"name":"decreased RNA splicing during vegetative growth","type":"exact"},{"name":"decreased RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","type":"exact"},{"name":"reduced RNA splicing","type":"exact"}],"termid":"FYPO:0003040"}


id: MONDO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian dysgenesis (obsolete MONDO:0000081)","termid":"MONDO:0000081","xrefs":{"Monarch":{"xref_id":"0000081"}}}


id: PBO:0117164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CELF2 antisense RNA 3","termid":"PBO:0117164"}


id: GO:0004454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-fructose = ADP + D-fructose 1-phosphate.","definition_xrefs":["EC:2.7.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"ketohexokinase activity","secondary_identifiers":["Reactome:R-HSA-5656459","RHEA:18145","MetaCyc:KETOHEXOKINASE-RXN","Reactome:R-HSA-70333"],"synonyms":[{"name":"ATP:D-fructose 1-phosphotransferase activity","type":"related"},{"name":"hepatic fructokinase activity","type":"narrow"},{"name":"ketohexokinase (phosphorylating)","type":"related"}],"termid":"GO:0004454"}


id: GO:0015192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-phenylalanine from one side of a membrane to the other. L-phenylalanine is 2-amino-3-phenylpropanoic acid.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-phenylalanine transmembrane transporter activity","synonyms":[{"name":"L-phenylalanine permease activity","type":"exact"},{"name":"L-phenylalanine transporter activity","type":"broad"}],"termid":"GO:0015192"}


id: GO:0007619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an organism for the purpose of attracting sexual partners.","definition_xrefs":["GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating behavior","termid":"GO:0007617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"courtship behavior","synonyms":[{"name":"courtship behaviour","type":"exact"}],"termid":"GO:0007619"}


id: PBO:0044256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X3-C motif chemokine ligand 1","termid":"PBO:0044256"}


id: PBO:0005367
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic liver disease","termid":"PBO:0005367"}


id: PBO:0060296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6 pseudogene 4","termid":"PBO:0060296"}


id: MONDO:0001775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"duodenal obstruction","termid":"MONDO:0002688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic duodenal ileus","secondary_identifiers":["SCTID:52232007","MEDGEN:510177","DOID:13687","UMLS:C0156087","icd11.foundation:379824638","ICD9:537.2"],"termid":"MONDO:0001775","xrefs":{"Monarch":{"xref_id":"0001775"}}}


id: PBO:0076687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 4 pseudogene 1","termid":"PBO:0076687"}


id: PBO:0088727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Slh1, human ASCC3 ortholog","termid":"PBO:0088727"}


id: MONDO:0019332
data:
  {"annotated_genes":["SJAG_05011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007858"}]},"cv_name":"mondo","definition":"Punctate palmoplantar keratoderma type I (PPKP1), also known as Buschke-Fischer-Brauer syndrome, is a very rare hereditary skin disease characterized by irregularly distributed epidermal hyperkeratosis of the palms and soles with wide variation among patients..","definition_xrefs":["Orphanet:79501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"punctate palmoplantar keratoderma","termid":"MONDO:0017675"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"punctate palmoplantar keratoderma type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1835662","SCTID:717184007","GARD:3103","MEDGEN:372099"],"synonyms":[{"name":"Brauer-Buschke-Fischer syndrome","type":"related"},{"name":"Buschke-Fischer-Brauer syndrome","type":"exact"},{"name":"PPKP1","type":"exact"},{"name":"keratoderma, palmoplantar punctate type 1","type":"related"},{"name":"keratodermia palmoplantaris papulosa, Buschke-Fischer-Brauer type","type":"exact"},{"name":"punctate palmoplantar keratoderma type I","type":"related"},{"name":"type I punctate palmoplantar keratoderma","type":"related"}],"termid":"MONDO:0019332","terms_by_termid":{"MONDO:0007858":null},"xrefs":{"Monarch":{"xref_id":"0019332"}}}


id: PBO:0065806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB2B, member RAS oncogene family","termid":"PBO:0065806"}


id: MONDO:0003477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma that arises from the brain stem.","definition_xrefs":["NCIT:C5098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain stem glioma","termid":"MONDO:0002911"},{"relation_name":"is_a","term_name":"ependymal tumor of brain","termid":"MONDO:0004245"},{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brain stem ependymoma","secondary_identifiers":["MEDGEN:231459","UMLS:C1332609","DOID:5508"],"synonyms":[{"name":"brain stem ependymoma","type":"exact"},{"name":"brainstem ependymoma","type":"exact"},{"name":"ependymoma of brain stem","type":"exact"},{"name":"ependymoma of brainstem","type":"exact"},{"name":"ependymoma of the brain stem","type":"exact"},{"name":"ependymoma of the brainstem","type":"exact"}],"termid":"MONDO:0003477","xrefs":{"Monarch":{"xref_id":"0003477"}}}


id: FYPO:0007757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the new mitotic spindle pole body is normal (i.e. indistinguishable from wild type) during anaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to new mitotic spindle pole body","termid":"FYPO:0003330"},{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body during anaphase","termid":"FYPO:0007568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to new mitotic spindle pole body during anaphase","synonyms":[{"name":"normal asymmetric protein localization to new mitotic spindle pole body during anaphase","type":"exact"},{"name":"normal protein localisation to new mitotic spindle pole body during anaphase","type":"exact"},{"name":"normal protein localization to new mitotic SPB during anaphase","type":"exact"},{"name":"normal protein localization to new mitotic spindle pole body during anaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to new spindle pole body during anaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to new spindle pole body during mitotic anaphase","type":"exact"}],"termid":"FYPO:0007757"}


id: MONDO:1010512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in pigs in which the cause of the disease is a mutation in the SGCD gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, pig","termid":"MONDO:1010460"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, SGCD-related, pig","secondary_identifiers":["OMIA:002211-9823"],"termid":"MONDO:1010512","xrefs":{"Monarch":{"xref_id":"1010512"}}}


id: FYECO:0000157
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells are initially grown in glucose minimal medium to stationary phase followed by transfer to H2O and continued growth.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth to stationary phase","termid":"FYECO:0000158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to stationary phase in rich medium followed by transfer to H2O","termid":"FYECO:0000157"}


id: FYPO:0003422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and tapered, i.e. tapers at one end to a diameter smaller than the other, contains more than one septum, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multiseptate vegetative cell","termid":"FYPO:0001494"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, septated cell with abnormal morphology","termid":"FYPO:0002450"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated tapered cell","termid":"FYPO:0002733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000032","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, elongated multiseptate tapered cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated multiseptate bottle-shaped cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated multiseptate bottle/skittle cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated multiseptate skittle-shaped cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, elongated multiseptate tapered cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, elongated multiseptate tapered cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, elongated multiseptate tapered cell","type":"exact"}],"termid":"FYPO:0003422"}


id: FYPO:0007434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells do not change the length at which they divide to the same extent as normal upon shifting from a good nitrogen source to a poor nitrogen source. Normally, cells divide at a smaller size after shifting to a poor nitrogen source; in mutants the size difference is less pronounced between media with good versus poor nitrogen sources. Good (or rich) nitrogen sources are distinguished from poor sources based on how readily nitrogen is assimilated into cellular metabolism. In microorganisms, good nitrogen sources generally support higher cell population growth rates than poor sources. In fission yeast, cells divide at a smaller size when grown on a poor nitrogen source than in nitrogen-rich media; proline is commonly used as a poor nitrogen source.","definition_xrefs":["PMID:10640599","PMID:25639242","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation upon nitrogen source shift","termid":"FYPO:0005206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"attenuated change in cell size at division upon shift to poor nitrogen source","synonyms":[{"name":"attenuated change in cell size at division upon shift to poor nitrogen source during mitotic cell cycle","type":"related"},{"name":"attenuated change in cell size at division upon shift to poor nitrogen source during vegetative growth","type":"exact"},{"name":"decreased change in cell length at division after shift to poor nitrogen source","type":"exact"}],"termid":"FYPO:0007434"}


id: FYPO:0008219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed during the G2/M phase of the mitotic cell cycle in which acetylation of lysine at position 56 of histone H3 in regions of the genome that are actively transcribed occurs to a greater extent than normal.","definition_xrefs":["PMID:27268234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K56 acetylation in transcribed regions during vegetative growth","termid":"FYPO:0002370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K56 acetylation in transcribed regions during mitotic G2/M phase","termid":"FYPO:0008219"}


id: MONDO:0000574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete CD45 deficiency (obsolete MONDO:0000574)","termid":"MONDO:0000574","xrefs":{"Monarch":{"xref_id":"0000574"}}}


id: MONDO:0015286
data:
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id: FYPO:0001087
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id: PBO:0058425
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id: PBO:0053359
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id: GO:0051220
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id: SO:0001539
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id: GO:0030921
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id: PBO:0091628
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id: PBO:0030984
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id: GO:0039506
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id: MONDO:0015861
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id: PBO:0045867
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id: MONDO:0017071
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id: GO:1902340
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id: PBO:0080675
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id: GO:0060950
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id: PBO:0080275
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id: MONDO:0021303
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id: PBO:0005346
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic protease, yapsin Yps1","termid":"PBO:0005346"}


id: PBO:0017837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted GTPAse with a role in RNA polymerase localization (predicted)","termid":"PBO:0017837"}


id: MONDO:0017342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"virus associated tumor","termid":"MONDO:0017341"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein-Barr virus-related tumor","secondary_identifiers":["MEDGEN:1842315","UMLS:C5679942","Orphanet:289638","GARD:21146"],"synonyms":[{"name":"EBV-related tumor","type":"exact"},{"name":"EBV-related tumour","type":"exact"}],"termid":"MONDO:0017342","xrefs":{"Monarch":{"xref_id":"0017342"}}}


id: PBO:0048762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell-less 2, spermatogenesis associated","termid":"PBO:0048762"}


id: GO:0061902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of 1-phosphatidylinositol-3-kinase activity.","definition_xrefs":["GOC:aruk","PMID:18723082","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of 1-phosphatidylinositol-3-kinase activity (obsolete GO:0061902)","termid":"GO:0061902"}


id: MONDO:0012730
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85413],"is_not":false,"summary":null,"term":"MONDO:0012730"}]},"cv_name":"mondo","definition":"Any familial thoracic aortic aneurysm and aortic dissection in which the cause of the disease is a mutation in the ACTA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial thoracic aortic aneurysm and aortic dissection","termid":"MONDO:0019625"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial thoracic 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:611788","UMLS:C2673186","MESH:C567085","GARD:15527","MEDGEN:435866"],"synonyms":[{"name":"AAT6","type":"related"},{"name":"ACTA2 familial thoracic aortic aneurysm and aortic dissection","type":"exact"},{"name":"aortic aneurysm, familial thoracic 6","type":"exact"},{"name":"aortic aneurysm, familial thoracic type 6","type":"exact"},{"name":"familial thoracic aortic aneurysm and aortic dissection caused by mutation in ACTA2","type":"exact"},{"name":"familial thoracic aortic aneurysm with livedo reticularis and iris flocculi","type":"related"}],"termid":"MONDO:0012730","terms_by_termid":{"MONDO:0012730":null},"xrefs":{"Monarch":{"xref_id":"0012730"}}}


id: PR:Q9Y7X6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ish1 gene.","definition_xrefs":["UniProtKB:Q9Y7X6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response protein ish1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.12c","synonyms":[{"name":"Spom972h-ish1","type":"exact"}],"termid":"PR:Q9Y7X6"}


id: FYPO:0003561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which prospore-specific spindle pole body remodeling is abnormal. Prospore-specific spindle pole body remodeling takes place during the second meiotic nuclear division during ascospore formation and results in the structural reorganization of the SPB, including the recruitment of sporulation-specific proteins to the outer plaque to form the meiotic outer plaque (MOP).","definition_xrefs":["PomBase:mah","GO:001322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal prospore formation","termid":"FYPO:0000196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000121","FYPO:0000054","FYPO:0000631"],"is_obsolete":false,"name":"abnormal prospore-specific spindle pole body remodeling","synonyms":[{"name":"abnormal ascospore-type prospore-specific spindle pole body remodeling","type":"exact"},{"name":"abnormal forespore-specific spindle pole body remodeling","type":"exact"},{"name":"abnormal prospore-specific SPB remodeling","type":"exact"}],"termid":"FYPO:0003561"}


id: PBO:0065152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 5","termid":"PBO:0065152"}


id: PBO:0042029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 86","termid":"PBO:0042029"}


id: MONDO:0012636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"restless legs syndrome, susceptibility to","termid":"MONDO:0100170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restless legs syndrome, susceptibility to, 6","secondary_identifiers":["OMIM:611185","UMLS:C1970020","MEDGEN:370810"],"synonyms":[{"name":"RLS6","type":"exact"},{"name":"periodic limb movements in sleep","type":"related"},{"name":"restless legs syndrome 6","type":"exact"},{"name":"restless legs syndrome, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0012636","xrefs":{"Monarch":{"xref_id":"0012636"}}}


id: MONDO:0016391
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86765,86764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"}]},"cv_name":"mondo","definition":"Neonatal diabetes mellitus presents as hyperglycemia, failure to thrive and, in some cases, dehydration and ketoacidosis which may be severe with coma, in a child within the first months of life.","definition_xrefs":["Orphanet:224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic diabetes","termid":"MONDO:0015967"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0005015"],"is_obsolete":false,"name":"neonatal diabetes mellitus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:P70.2","DOID:11717","GARD:18682","icd11.foundation:1217915084","NANDO:2200463","ICD9:775.1","NCIT:C99248","SCTID:49817004","MedDRA:10028933","MEDGEN:57645","UMLS:C0158981"],"synonyms":[{"name":"NDM","type":"exact"},{"name":"congenital diabetes mellitus","type":"exact"},{"name":"diabetes mellitus syndrome in newborn infant","type":"exact"}],"termid":"MONDO:0016391","terms_by_termid":{"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0016391"}}}


id: GO:0048555
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of the generative cell, a cell contained within the pollen grain that will divide to produce two haploid sperm cells.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"generative cell nucleus","synonyms":[{"name":"male germ cell nucleus","type":"broad"},{"name":"sperm cell nucleus","type":"broad"}],"termid":"GO:0048555"}


id: PBO:0086175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the negative regulation by ammonia of Gap1p; Gap1p is a general amino acid permease","termid":"PBO:0086175"}


id: GO:0048613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the embryonic phase, by which the anatomical structures of the ectodermal digestive tract are generated and organized.","definition_xrefs":["GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic digestive tract morphogenesis","termid":"GO:0048557"},{"relation_name":"part_of","term_name":"ectodermal digestive tract morphogenesis","termid":"GO:0048567"},{"relation_name":"part_of","term_name":"embryonic ectodermal digestive tract development","termid":"GO:0048611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic ectodermal digestive tract morphogenesis","synonyms":[{"name":"embryonic ectodermal gut morphogenesis","type":"related"}],"termid":"GO:0048613"}


id: GO:0005509
data:
  {"annotated_genes":["SJAG_01760","SJAG_02435","SJAG_02511","SJAG_03088","SJAG_00485","SJAG_01029","SJAG_00228","SJAG_04901","SJAG_00719","SJAG_00032","SJAG_03793","SJAG_04013","SJAG_00751","SJAG_03496","SJAG_02019","SJAG_00803","SJAG_03032","SJAG_00832","SJAG_00096","SJAG_01149","SJAG_04466","SJAG_00321","SJAG_01665","SJAG_00724","SJAG_03044","SJAG_02532","SJAG_00063","SJAG_04859","SJAG_03930","SJAG_01400","SJAG_04789","SJAG_04238","SJAG_04781","SJAG_02786","SJAG_02694","SJAG_00296","SJAG_03643","SJAG_03850","SJAG_00612","SJAG_04886","SJAG_01686","SJAG_01858","SJAG_03465","SJAG_01626","SJAG_02215","SJAG_04571","SJAG_04621","SJAG_04080","SJAG_04051","SJAG_01929"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59050,59109,59241,59383,59672,59717,59868,59997,60250,60257,60525,60729,61391,61496,63897,66106,66898,67100,67706,68134,68280,69420,69433,69655,72741,74378,75327,78613,78881,79236,79649,89955,96626,101948,103171,103941,105610,106445,106794,108370,108605,108982,111338,112620,114070,117297,117829,117939,118501,119169],"is_not":false,"summary":null,"term":"GO:0005509"}]},"cv_name":"molecular_function","definition":"Binding to a calcium ion (Ca2+).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion binding","termid":"GO:0046872"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00032":null,"SJAG_00063":null,"SJAG_00096":null,"SJAG_00228":null,"SJAG_00296":null,"SJAG_00321":null,"SJAG_00485":null,"SJAG_00612":null,"SJAG_00719":null,"SJAG_00724":null,"SJAG_00751":null,"SJAG_00803":null,"SJAG_00832":null,"SJAG_01029":null,"SJAG_01149":null,"SJAG_01400":null,"SJAG_01626":null,"SJAG_01665":null,"SJAG_01686":null,"SJAG_01760":null,"SJAG_01858":null,"SJAG_01929":null,"SJAG_02019":null,"SJAG_02215":null,"SJAG_02435":null,"SJAG_02511":null,"SJAG_02532":null,"SJAG_02694":null,"SJAG_02786":null,"SJAG_03032":null,"SJAG_03044":null,"SJAG_03088":null,"SJAG_03465":null,"SJAG_03496":null,"SJAG_03643":null,"SJAG_03793":null,"SJAG_03850":null,"SJAG_03930":null,"SJAG_04013":null,"SJAG_04051":null,"SJAG_04080":null,"SJAG_04238":null,"SJAG_04466":null,"SJAG_04571":null,"SJAG_04621":null,"SJAG_04781":null,"SJAG_04789":null,"SJAG_04859":null,"SJAG_04886":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0003674","GO:0046872","GO:0005488"],"is_obsolete":false,"name":"calcium ion binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"calcium ion storage activity","type":"related"}],"termid":"GO:0005509","terms_by_termid":{"GO:0005509":null}}


id: FYPO:0000150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the morphology, i.e. the size, shape, or structure, of a colony growing on a solid surface is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"abnormal colony morphology","synonyms":[{"name":"colony shape: abnormal","type":"related"}],"termid":"FYPO:0000150"}


id: GO:0000281
data:
  {"annotated_genes":["SJAG_01665","SJAG_04498","SJAG_02916","SJAG_04887","SJAG_00442","SJAG_03264","SJAG_05290","SJAG_03376","SJAG_05179","SJAG_03048","SJAG_03123","SJAG_02838","SJAG_03025","SJAG_01188","SJAG_02700","SJAG_04666","SJAG_02864","SJAG_01386","SJAG_02807","SJAG_01277","SJAG_01787","SJAG_02392","SJAG_01114","SJAG_00807","SJAG_03564","SJAG_00279","SJAG_03936","SJAG_04690","SJAG_03704","SJAG_03374","SJAG_02215","SJAG_04781","SJAG_00663","SJAG_01805","SJAG_03342","SJAG_03703","SJAG_01863","SJAG_03596","SJAG_04776","SJAG_00228","SJAG_01143","SJAG_01837","SJAG_03045","SJAG_04551","SJAG_04468","SJAG_04412","SJAG_00514","SJAG_03631","SJAG_04982","SJAG_00845","SJAG_01894","SJAG_00700","SJAG_04597","SJAG_03581","SJAG_04943","SJAG_04358","SJAG_01943","SJAG_00256","SJAG_01464","SJAG_02657","SJAG_01456","SJAG_03309","SJAG_03915","SJAG_00268","SJAG_01453","SJAG_01889","SJAG_04930","SJAG_02380","SJAG_04703","SJAG_00082","SJAG_03887","SJAG_01732","SJAG_02831","SJAG_03379","SJAG_04001","SJAG_03692","SJAG_02431","SJAG_01215","SJAG_02232","SJAG_02222","SJAG_04375","SJAG_02592","SJAG_05285","SJAG_04077"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80224,98222,98614,100438,101280,103573,104235,106521,113075,119276],"is_not":false,"summary":null,"term":"GO:0000281"},{"annotations":[91634,100087],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061796"},{"annotations":[92933,118764,102879,75289,72899,118180,112612,88601,76703,95623,75940,98049,92883,98245,99223,102736,119470,112177,97974],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903475"},{"annotations":[77783],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[118181,101249,97975,101021,99224,112613,95624,98355,88602,102737],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902404"},{"annotations":[88614,96655,109165,119859],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902408"},{"annotations":[80778,104981,106444,99612,108925,102958,113383],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140278"},{"annotations":[102681],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[104012],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[102460,99991,107410,93185],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902413"},{"annotations":[102686],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[94749,90340],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[94919,94750,110832,113670,87876],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903473"},{"annotations":[91109,111075,119860,104017],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[106701,115774,107362,105501,78274,118193,113671,90210,92760,94145],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[87877,92761,94753],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[106428,114689],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031671"},{"annotations":[111112,118942,92668],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904498"},{"annotations":[119711,94151],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"},{"annotations":[92185,77401,107455,103806,118994,109522,117821,101261,90156],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902412"},{"annotations":[111684,101706,88194],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"},{"annotations":[116122],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"},{"relation_name":"is_a","term_name":"mitotic cell cycle 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id: PBO:0034239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-target_participant_in","termid":"PBO:0034239"}


id: MONDO:1011659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric dilatation volvulus syndrome, non-human animal","secondary_identifiers":["OMIA:000404"],"termid":"MONDO:1011659","xrefs":{"Monarch":{"xref_id":"1011659"}}}


id: GO:1902787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dodecane stimulus.","definition_xrefs":["GO_REF:0000071","PMID:23826995","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to dodecane","termid":"GO:1902786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dodecane","termid":"GO:1902787"}


id: GO:0015972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"guanosine pentaphosphate metabolic process","synonyms":[{"name":"guanosine pentaphosphate (5'-pppGpp-3') metabolic process","type":"exact"},{"name":"guanosine pentaphosphate (5'-pppGpp-3') metabolism","type":"exact"},{"name":"guanosine pentaphosphate metabolism","type":"exact"}],"termid":"GO:0015972"}


id: GO:1990868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemokine stimulus.","definition_xrefs":["PMID:11113082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chemokine","termid":"GO:1990868"}


id: PBO:0046947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 72 member D","termid":"PBO:0046947"}


id: PBO:0053463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 424","termid":"PBO:0053463"}


id: GO:2000551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 2 cell cytokine production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell cytokine production","termid":"GO:0002724"},{"relation_name":"is_a","term_name":"regulation of type 2 immune response","termid":"GO:0002828"},{"relation_name":"regulates","term_name":"T-helper 2 cell cytokine production","termid":"GO:0035745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 2 cell cytokine production","synonyms":[{"name":"regulation of Th2 cell cytokine production","type":"exact"}],"termid":"GO:2000551"}


id: GO:0042053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dopamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine metabolic process","termid":"GO:0042069"},{"relation_name":"regulates","term_name":"dopamine metabolic process","termid":"GO:0042417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dopamine metabolic process","synonyms":[{"name":"regulation of dopamine metabolism","type":"exact"}],"termid":"GO:0042053"}


id: MONDO:0005343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete viral human hepatitis (obsolete MONDO:0005343)","termid":"MONDO:0005343","xrefs":{"Monarch":{"xref_id":"0005343"}}}


id: MONDO:0032570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 35","secondary_identifiers":["UMLS:C4748442","GARD:16297","MEDGEN:1648453","OMIM:618161"],"synonyms":[{"name":"JBTS35","type":"related"},{"name":"JOUBERT SYNDROME 35","type":"related"}],"termid":"MONDO:0032570","xrefs":{"Monarch":{"xref_id":"0032570"}}}


id: PBO:0082061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyanthranilic acid dioxygenase; required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expression regulated by Hst1p","termid":"PBO:0082061"}


id: PBO:0035997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_centromere_central_core_during_vegetative_growth","termid":"PBO:0035997"}


id: PBO:0113128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eukaryotic initiation factor eIF2A; associates specifically with both 40S subunits and 80S ribosomes, and interacts genetically with both eIF5b and eIF4E; physically interacts with Ssd1p, and associates with mRNAs encoding proteins required for cell wall organization, and some of which require the presence of Ssd1p; translational repressor of cell wall-related proteins; interacts physically and genetically with Xrn1p; homologous to mammalian eIF2A","termid":"PBO:0113128"}


id: GO:1901727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone deacetylase activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:20497126","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone deacetylase activity (obsolete GO:1901727)","synonyms":[{"name":"activation of histone deacetylase activity","type":"narrow"},{"name":"up regulation of histone deacetylase activity","type":"exact"},{"name":"up-regulation of histone deacetylase activity","type":"exact"},{"name":"upregulation of histone deacetylase activity","type":"exact"}],"termid":"GO:1901727"}


id: GO:0060234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which a neuroblast splits off of a neurectodermal sheet.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"neuroblast delamination","termid":"GO:0060234"}


id: GO:0102846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:3-2-16:1-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:3-2-16:1-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102846)","termid":"GO:0102846"}


id: PBO:0051482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (VI)-25-1 (pseudogene)","termid":"PBO:0051482"}


id: FYPO:0001299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which palmitoyl-CoA ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal palmitoyl-CoA ligase activity","termid":"FYPO:0001297"},{"relation_name":"is_a","term_name":"abolished long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished palmitoyl-CoA ligase activity","synonyms":[{"name":"abolished palmitoyl-CoA synthetase activity","type":"exact"},{"name":"palmitoyl-CoA ligase activity abolished","type":"exact"}],"termid":"FYPO:0001299"}


id: PBO:0048447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GBX2 and ASB18 antisense RNA 1","termid":"PBO:0048447"}


id: GO:1905663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of telomerase RNA reverse transcriptase activity.","definition_xrefs":["GOC:TermGenie","GOC:nc","PMID:22633954","GOC:BHF","GO_REF:0000059","GOC:BHF_telomere"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of telomerase RNA reverse transcriptase activity (obsolete GO:1905663)","synonyms":[{"name":"activation of telomerase RNA reverse transcriptase activity","type":"narrow"},{"name":"activation of telomerase, catalyst","type":"narrow"},{"name":"positive regulation of telomerase, catalyst","type":"exact"},{"name":"up regulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"up regulation of telomerase, catalyst","type":"exact"},{"name":"up-regulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"up-regulation of telomerase, catalyst","type":"exact"},{"name":"upregulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"upregulation of telomerase, catalyst","type":"exact"}],"termid":"GO:1905663"}


id: PBO:0076228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT16 homolog, facilitates chromatin remodeling subunit pseudogene 1","termid":"PBO:0076228"}


id: GO:1990709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of a presynaptic active zone.","definition_xrefs":["PMID:16865347","GOC:pr","PMID:17068967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"presynaptic active zone organization","synonyms":[{"name":"presynaptic active zone organisation","type":"exact"}],"termid":"GO:1990709"}


id: MONDO:0000385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm arising from any part of the digestive system.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign digestive system neoplasm","secondary_identifiers":["MEDGEN:141680","UMLS:C0497538","DOID:0050624","NCIT:C4787"],"synonyms":[{"name":"alimentary part of gastrointestinal system benign neoplasm","type":"exact"},{"name":"benign GI neoplasm","type":"exact"},{"name":"benign GI system neoplasm","type":"exact"},{"name":"benign GI system tumor","type":"exact"},{"name":"benign GI system tumour","type":"exact"},{"name":"benign GI tumor","type":"exact"},{"name":"benign GI tumour","type":"exact"},{"name":"benign digestive system tumor","type":"exact"},{"name":"benign digestive system tumour","type":"exact"},{"name":"benign gastrointestinal neoplasm","type":"exact"},{"name":"benign gastrointestinal system tumor","type":"exact"},{"name":"benign gastrointestinal system tumour","type":"exact"},{"name":"benign gastrointestinal tumor","type":"exact"},{"name":"benign gastrointestinal tumour","type":"exact"},{"name":"benign neoplasm of digestive system","type":"exact"},{"name":"benign neoplasm of gastrointestinal system","type":"exact"},{"name":"benign neoplasm of the digestive system","type":"exact"},{"name":"benign tumor of GI system","type":"exact"},{"name":"benign tumor of digestive system","type":"exact"},{"name":"benign tumor of gastrointestinal system","type":"exact"},{"name":"benign tumor of the GI system","type":"exact"},{"name":"benign tumor of the digestive system","type":"exact"},{"name":"benign tumor of the gastrointestinal system","type":"exact"},{"name":"benign tumour of GI system","type":"exact"},{"name":"benign tumour of digestive system","type":"exact"},{"name":"benign tumour of gastrointestinal system","type":"exact"},{"name":"benign tumour of the GI system","type":"exact"},{"name":"benign tumour of the digestive system","type":"exact"},{"name":"benign tumour of the gastrointestinal system","type":"exact"},{"name":"gastrointestinal system benign neoplasm","type":"related"}],"termid":"MONDO:0000385","xrefs":{"Monarch":{"xref_id":"0000385"}}}


id: GO:2000390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neutrophil extravasation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular extravasation","termid":"GO:0002692"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil migration","termid":"GO:1902623"},{"relation_name":"is_a","term_name":"regulation of neutrophil extravasation","termid":"GO:2000389"},{"relation_name":"negatively_regulates","term_name":"neutrophil extravasation","termid":"GO:0072672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil extravasation","termid":"GO:2000390"}


id: PBO:0039124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIFM1 pseudogene 1","termid":"PBO:0039124"}


id: PBO:0068701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 82, pseudogene","termid":"PBO:0068701"}


id: SO:0000179
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The start of the clone insert.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"},{"relation_name":"part_of","term_name":"clone_insert","termid":"SO:0000753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clone_insert_start","synonyms":[{"name":"clone insert start","type":"exact"}],"termid":"SO:0000179"}


id: PBO:0058765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6889","termid":"PBO:0058765"}


id: GO:2000401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte migration","termid":"GO:2000401"}


id: PBO:0072393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 19","termid":"PBO:0072393"}


id: MONDO:0014145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the GDF6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Leber congenital amaurosis 17","secondary_identifiers":["GARD:15950","OMIM:615360","UMLS:C3715164","ICD10CM:H35.5","MEDGEN:811616","DOID:0110217"],"synonyms":[{"name":"GDF6 Leber congenital amaurosis","type":"exact"},{"name":"LCA17","type":"exact"},{"name":"Leber congenital amaurosis 17","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in GDF6","type":"exact"},{"name":"Leber congenital amaurosis type 17","type":"exact"}],"termid":"MONDO:0014145","xrefs":{"Monarch":{"xref_id":"0014145"}}}


id: GO:0016818
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deadenylation-dependent mRNA decay","type":"exact"},{"name":"up-regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"up-regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"up-regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"up-regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"up-regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"up-regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"up-regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"up-regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"upregulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"upregulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"upregulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"upregulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"upregulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"upregulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"upregulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"upregulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"upregulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","type":"exact"}],"termid":"GO:1900153"}


id: PBO:0045007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodothyronine deiodinase 2","termid":"PBO:0045007"}


id: GO:0047898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formate + ferricytochrome b1 = CO2 + ferrocytochrome b1.","definition_xrefs":["EC:1.2.2.1","MetaCyc:FORMATE-DEHYDROGENASE-CYTOCHROME-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","termid":"GO:0016622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"formate dehydrogenase (cytochrome) activity","secondary_identifiers":["RHEA:21520"],"synonyms":[{"name":"formate:cytochrome b1 oxidoreductase activity","type":"related"},{"name":"formate:ferricytochrome-b1 oxidoreductase activity","type":"related"}],"termid":"GO:0047898"}


id: PBO:0004728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase subunit 3","termid":"PBO:0004728"}


id: PBO:0074157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member F1","termid":"PBO:0074157"}


id: MONDO:0035684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epidermolysis bullosa simplex without extracutaneous involvement (obsolete MONDO:0035684)","secondary_identifiers":["Orphanet:595346"],"synonyms":[{"name":"EBS without extracutaneous involvement","type":"exact"}],"termid":"MONDO:0035684","xrefs":{"Monarch":{"xref_id":"0035684"}}}


id: PBO:0055694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limb and CNS expressed 1 like","termid":"PBO:0055694"}


id: PBO:0065643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 21","termid":"PBO:0065643"}


id: PBO:0083880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric reductase; reduces a specific subset of siderophore-bound iron prior to uptake by transporters; expression induced by low iron levels","termid":"PBO:0083880"}


id: PBO:0070170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 84 pseudogene","termid":"PBO:0070170"}


id: PBO:0082824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved oxidoreductase involved in lipid droplet morphology; mutant shows defects in CPY processing and vacuolar morphology; required for replication of Brome mosaic virus in S. cerevisiae, a model system for studying replication of positive-strand RNA viruses in their natural hosts; homologus to human RDH12 linked to Leber Congenital Amaurosis","termid":"PBO:0082824"}


id: GO:0048687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of sprouting of an injured axon.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:lm","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of axon regeneration","termid":"GO:0048680"},{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"positively_regulates","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sprouting of injured axon","synonyms":[{"name":"activation of sprouting of injured axon","type":"narrow"},{"name":"stimulation of sprouting of injured axon","type":"narrow"},{"name":"up regulation of sprouting of injured axon","type":"exact"},{"name":"up-regulation of sprouting of injured axon","type":"exact"},{"name":"upregulation of sprouting of injured axon","type":"exact"}],"termid":"GO:0048687"}


id: GO:0043553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylinositol 3-kinase activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylinositol 3-kinase activity (obsolete GO:0043553)","synonyms":[{"name":"down regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"down-regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"downregulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"inhibition of phosphatidylinositol 3-kinase activity","type":"narrow"},{"name":"negative regulation of PI3K activity","type":"exact"},{"name":"negative regulation of phosphoinositide 3-kinase activity","type":"exact"}],"termid":"GO:0043553"}


id: PBO:0071322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 6","termid":"PBO:0071322"}


id: GO:0031776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a melanin-concentrating hormone receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"melanin-concentrating hormone receptor binding","synonyms":[{"name":"melanin-concentrating hormone receptor ligand","type":"narrow"}],"termid":"GO:0031776"}


id: PBO:0001810
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.2.21","termid":"PBO:0001810"}


id: GO:0047618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-benzoylagmatine + H2O = agmatine + benzoate.","definition_xrefs":["RHEA:15065","EC:3.5.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"acylagmatine amidase activity","secondary_identifiers":["KEGG_REACTION:R01425","MetaCyc:ACYLAGMATINE-AMIDASE-RXN"],"synonyms":[{"name":"acylagmatine amidohydrolase activity","type":"related"},{"name":"acylagmatine deacylase activity","type":"related"},{"name":"benzoylagmatine amidohydrolase activity","type":"related"}],"termid":"GO:0047618"}


id: MONDO:0009639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial myopathy with lactic acidosis (obsolete MONDO:0009639)","termid":"MONDO:0009639","xrefs":{"Monarch":{"xref_id":"0009639"}}}


id: GO:0051294
data:
  {"annotated_genes":["SJAG_00594","SJAG_02651","SJAG_02737","SJAG_02695","SJAG_00140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97306,105187,117244,76698,104858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"Any process that set the alignment of spindle relative to other cellular structures.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of spindle localization","termid":"GO:0051293"},{"relation_name":"part_of","term_name":"establishment of cell polarity","termid":"GO:0030010"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00140":null,"SJAG_00594":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0051179","GO:0008150","GO:0007163","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"establishment of spindle orientation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"orienting of spindle","type":"exact"},{"name":"spindle orientation","type":"exact"}],"termid":"GO:0051294","terms_by_termid":{"GO:0000132":null}}


id: PBO:0077845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin polyglutamylase complex subunit 1","termid":"PBO:0077845"}


id: PBO:0001962
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target genes transcriptionally co-regulated by Cdk9","termid":"PBO:0001962"}


id: PBO:0089864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP5 subunit Mod21","termid":"PBO:0089864"}


id: PBO:0051515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKAROS family zinc finger 5","termid":"PBO:0051515"}


id: GO:0047646
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: R-CHO + reduced FMN + O2 = R-COOH + FMN + H2O + light.","definition_xrefs":["EC:1.14.14.3","MetaCyc:ALKANAL-MONOOXYGENASE-FMN-LINKED-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"alkanal monooxygenase (FMN-linked) activity","secondary_identifiers":["RHEA:17181"],"synonyms":[{"name":"aldehyde monooxygenase activity","type":"broad"},{"name":"alkanal,reduced-FMN:oxygen oxidoreductase (1-hydroxylating, luminescing)","type":"related"},{"name":"bacterial luciferase activity","type":"related"},{"name":"vibrio fischeri luciferase activity","type":"related"}],"termid":"GO:0047646"}


id: PBO:0051901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 9","termid":"PBO:0051901"}


id: GO:0033843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-xylosyl residue from UDP-D-xylose to a glucose residue in xyloglucan, forming an alpha-1,6-D-xylosyl-D-glucose linkage.","definition_xrefs":["EC:2.4.2.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylosyltransferase activity","termid":"GO:0042285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"xyloglucan 6-xylosyltransferase activity","synonyms":[{"name":"UDP-D-xylose:xyloglucan 1,6-alpha-D-xylosyltransferase activity","type":"related"},{"name":"uridine diphosphoxylose-xyloglucan 6alpha-xylosyltransferase activity","type":"related"},{"name":"xyloglucan 6-alpha-D-xylosyltransferase activity","type":"related"}],"termid":"GO:0033843"}


id: GO:0018325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-cysteine to form S-phospho-L-cysteine.","definition_xrefs":["RESID:AA0034"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via S-phospho-L-cysteine (obsolete GO:0018325)","termid":"GO:0018325"}


id: PBO:0027015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_positive_regulation_of_protein_kinase_activity","termid":"PBO:0027015"}


id: GO:0045275
data:
  {"annotated_genes":["SJAG_03490","SJAG_01763","SJAG_02646","SJAG_MIT03","SJAG_00080","SJAG_00601","SJAG_01490","SJAG_07006","SJAG_00755"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61896,72448,74065,76033,76187,104391,113708,117985,119356],"is_not":false,"summary":null,"term":"GO:0045275"}]},"cv_name":"cellular_component","definition":"A protein complex that transfers electrons from ubiquinol to cytochrome c and translocates two protons across a membrane. The complex contains a core structure of three catalytic subunits: cytochrome b, the Rieske iron sulfur protein (ISP), and cytochrome c1, which are arranged in an integral membrane-bound dimeric complex; additional subunits are present, and vary among different species.","definition_xrefs":["PMID:17200733","PMID:16352458","PMID:16228398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex","termid":"GO:0070069"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_01490":null,"SJAG_01763":null,"SJAG_02646":null,"SJAG_03490":null,"SJAG_07006":null,"SJAG_MIT03":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"respiratory chain complex III","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0032842","GO:0045285","Wikipedia:Coenzyme_Q_-_cytochrome_c_reductase"],"synonyms":[{"name":"CoQH2-cytochrome c reductase complex","type":"related"},{"name":"coenzyme Q-cytochrome c oxidoreductase complex","type":"related"},{"name":"coenzyme Q-cytochrome c reductase complex","type":"related"},{"name":"complex III","type":"exact"},{"name":"cytochrome bc(1) complex","type":"exact"},{"name":"cytochrome bc1 complex","type":"exact"},{"name":"electron transport complex III","type":"related"},{"name":"ubiquinol-cytochrome c oxidoreductase complex","type":"exact"},{"name":"ubiquinol-cytochrome-c reductase complex","type":"exact"}],"termid":"GO:0045275","terms_by_termid":{"GO:0045275":null}}


id: PBO:0064762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase E like pseudogene","termid":"PBO:0064762"}


id: PBO:0081498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 396","termid":"PBO:0081498"}


id: GO:0048196
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The matrix external to the plant plasma membrane, composed of the cell wall and middle lamella.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","PMID:11351084","PMID:4327466"],"gene_count":0,"genotype_count":0,"name":"obsolete plant extracellular matrix (obsolete GO:0048196)","synonyms":[{"name":"middle lamella-containing extracellular matrix","type":"related"},{"name":"plant extracellular matrix","type":"exact"}],"termid":"GO:0048196"}


id: FYPO:0007209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is decreased along the length of the chromosome arms during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:31483748","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"decreased sister chromatid cohesion along chromosome arms during mitotic interphase","synonyms":[{"name":"decreased mitotic sister chromatid cohesion along chromosome arms during interphase","type":"exact"},{"name":"decreased sister chromatid cohesion along chromosome arms during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased sister chromatid cohesion along chromosome arms during mitotic interphase during vegetative growth","type":"exact"},{"name":"reduced sister chromatid cohesion along chromosome arms during mitotic interphase","type":"exact"}],"termid":"FYPO:0007209"}


id: PBO:0048747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 1B","termid":"PBO:0048747"}


id: PBO:0072654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 8A","termid":"PBO:0072654"}


id: MONDO:0002920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that arises from the ovary and is characterized by the presence of an invasive malignant transitional cell component and nests of benign transitional cells in a fibrotic stroma. When the neoplasm is confined to the ovary, the prognosis is good.","definition_xrefs":["NCIT:C4270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian Brenner tumor","termid":"MONDO:0002370"},{"relation_name":"is_a","term_name":"malignant epithelial tumor of ovary","termid":"MONDO:0018364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant ovarian Brenner tumor","secondary_identifiers":["DOID:4217","UMLS:C0334495","MEDGEN:90793","ICDO:9000/3"],"synonyms":[{"name":"malignant Brenner tumor of ovary","type":"exact"},{"name":"malignant Brenner tumor of the ovary","type":"exact"},{"name":"malignant Brenner tumour of ovary","type":"exact"},{"name":"malignant Brenner tumour of the ovary","type":"exact"},{"name":"malignant ovarian Brenner tumor","type":"exact"},{"name":"ovarian Brenner tumor, malignant","type":"exact"}],"termid":"MONDO:0002920","xrefs":{"Monarch":{"xref_id":"0002920"}}}


id: GO:0008425
data:
  {"annotated_genes":["SJAG_01043"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74541],"is_not":false,"summary":null,"term":"GO:0008425"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-methoxy-6-all-trans-polyprenyl-1,4-benzoquinol + S-adenosyl-L-methionine = a 6-methoxy-3-methyl-2-all-trans-polyprenyl-1,4-benzoquinol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:23190198","RHEA:28286","PMID:9083048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01043":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"2-methoxy-6-polyprenyl-1,4-benzoquinol methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.1.1.201","Reactome:R-HSA-2162188"],"synonyms":[{"name":"2-polyprenyl-6-methoxy-1,4-benzoquinone methylase activity","type":"exact"},{"name":"2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity","type":"exact"},{"name":"coenzyme Q biosynthesis methyltransferase activity","type":"exact"},{"name":"coenzyme Q biosynthetic process methyltransferase activity","type":"exact"},{"name":"ubiquinone biosynthesis methyltransferase activity","type":"broad"},{"name":"ubiquinone biosynthetic process methyltransferase activity","type":"broad"}],"termid":"GO:0008425","terms_by_termid":{"GO:0008425":null}}


id: MONDO:0008945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition marked by progressive cerebellar ataxia combined with myoclonus usually presenting in the third decade of life or later. Additional clinical features may include generalized and focal seizures, spasticity, and dyskinesias. Autosomal recessive and autosomal dominant patterns of inheritance have been reported. Pathologically, the dentate nucleus and brachium conjunctivum of the cerebellum are atrophic, with variable involvement of the spinal cord, cerebellar cortex, and basal ganglia. (From Joynt, Clinical Neurology, 1991, Ch37, pp60-1)","definition_xrefs":["MESH:D002527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebelloparenchymal disorder","termid":"MONDO:0000114"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"myoclonic cerebellar dyssynergia","secondary_identifiers":["SCTID:73495003","EFO:1001053","OMIM:213400","UMLS:C3489626","MEDGEN:483579","DOID:12707","OMIM:159700"],"synonyms":[{"name":"CPD5","type":"related"},{"name":"Ramsay Hunt cerebellar syndrome","type":"related"},{"name":"Ramsay Hunt syndrome","type":"related"},{"name":"Ramsay Hunt syndrome type 1","type":"related"},{"name":"Ramsay Hunt syndrome type 1 (formerly)","type":"related"},{"name":"Spinodentate atrophy","type":"related"},{"name":"cerebelloparenchymal disorder 5","type":"related"},{"name":"cerebelloparenchymal disorder V","type":"related"},{"name":"cerebelloparenchymal disorder type 5","type":"exact"},{"name":"dentate cerebellar ataxia","type":"related"},{"name":"dentatorubral atrophy","type":"related"},{"name":"dyssynergia cerebellaris myoclonica","type":"exact"},{"name":"dyssynergia cerebellaris myoclonica of Hunt","type":"related"},{"name":"dyssynergia cerebellaris progressiva","type":"related"},{"name":"myoclonus and ataxia","type":"exact"},{"name":"primary dentatum atrophy","type":"related"},{"name":"progressive cerebellar tremor","type":"exact"},{"name":"progressive myoclonus ataxia","type":"related"}],"termid":"MONDO:0008945","xrefs":{"Monarch":{"xref_id":"0008945"}}}


id: PBO:0056617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDS1 and EVI1 complex locus","termid":"PBO:0056617"}


id: MOD:01562
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01562"}


id: PBO:0047680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamin C","termid":"PBO:0047680"}


id: GO:0141096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A DNA-binding transcription repressor activity regulated by binding to a ligand and that inhibits the transcription of specific genes and gene sets.","definition_xrefs":["PMID:21555518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription repressor activity","termid":"GO:0001217"},{"relation_name":"is_a","term_name":"ligand-modulated transcription factor activity","termid":"GO:0098531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0001217"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140110","GO:0003700","GO:0001217"],"is_obsolete":false,"name":"ligand-modulated transcription repressor activity","synonyms":[{"name":"ligand-activated transcription repressor activity","type":"narrow"}],"termid":"GO:0141096"}


id: PBO:0089325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp3","termid":"PBO:0089325"}


id: PBO:0091051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane calcium ion import channel Cch1","termid":"PBO:0091051"}


id: PBO:0004669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZNF_U1","termid":"PBO:0004669"}


id: MONDO:0014000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital heart malformation in which the cause of the disease is a mutation in the TAB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart defects, multiple types","termid":"MONDO:0000119"},{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital heart defects, multiple types, 2","secondary_identifiers":["OMIM:614980","MEDGEN:767193","UMLS:C3554279"],"synonyms":[{"name":"CHTD2","type":"related"},{"name":"TAB2 congenital heart malformation","type":"exact"},{"name":"congenital heart defects, multiple types, 2","type":"exact"},{"name":"congenital heart defects, nonsyndromic, 2","type":"exact"},{"name":"congenital heart malformation caused by mutation in TAB2","type":"exact"}],"termid":"MONDO:0014000","xrefs":{"Monarch":{"xref_id":"0014000"}}}


id: MONDO:0005514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nanophthalmia is a severe form of microphthalmia characterized by a small eye with a short axial length, severe hyperopia, an elevated lens/eye ratio, and a high incidence of angle-closure glaucoma.","definition_xrefs":["Orphanet:35612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"isolated anophthalmia-microphthalmia syndrome","termid":"MONDO:0016764"},{"relation_name":"is_a","term_name":"microphthalmia","termid":"MONDO:0021129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nanophthalmia","secondary_identifiers":["UMLS:C4274282","MEDGEN:901455","GARD:16637","SCTID:716775009","DOID:0080634","OMIMPS:600165"],"termid":"MONDO:0005514","xrefs":{"Monarch":{"xref_id":"0005514"}}}


id: PBO:0050785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 2B","termid":"PBO:0050785"}


id: GO:0019461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glutamine into fumarate, beginning with the conversion of glutamine to glutamate catalyzed by the enzyme glutamate synthase (NADPH) (EC:1.4.1.13).","definition_xrefs":["GOC:jl","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamine catabolic process to fumarate, using glutamate synthase (NADPH) (obsolete GO:0019461)","synonyms":[{"name":"glutamate catabolic process to fumarate, using glutamate synthase (NADPH)","type":"related"},{"name":"glutamine breakdown to fumarate, using glutamate synthase (NADPH)","type":"exact"},{"name":"glutamine degradation to fumarate, using glutamate synthase (NADPH)","type":"exact"}],"termid":"GO:0019461"}


id: PBO:0082214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 3 subunit of the 20S proteasome; the only nonessential 20S subunit; may be replaced by the alpha 4 subunit (Pre6p) under stress conditions to create a more active proteasomal isoform","termid":"PBO:0082214"}


id: GO:0070570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neuron projection regeneration, the regrowth of neuronal processes such as axons or dendrites following their loss or damage.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"neuron projection regeneration","termid":"GO:0031102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron projection regeneration","termid":"GO:0070570"}


id: MONDO:0032790
data:
  {"annotated_genes":["SJAG_00861"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87303],"is_not":false,"summary":null,"term":"MONDO:0032790"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with coarse facies and mild distal skeletal abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081443","MEDGEN:1682403","OMIM:618505","UMLS:C5193134"],"synonyms":[{"name":"NEDCFSA","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH COARSE FACIES AND MILD DISTAL SKELETAL ABNORMALITIES","type":"related"}],"termid":"MONDO:0032790","terms_by_termid":{"MONDO:0032790":null},"xrefs":{"Monarch":{"xref_id":"0032790"}}}


id: GO:0034983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an acetyl group from an acetylated lysine residue in a peptide or protein.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacetylation","termid":"GO:0006476"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine deacetylation","synonyms":[{"name":"protein lysine acetylation","type":"related"}],"termid":"GO:0034983"}


id: PBO:0045641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 5","termid":"PBO:0045641"}


id: PBO:0040112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with SH3 domain, ankyrin repeat and PH domain 2","termid":"PBO:0040112"}


id: PBO:0053704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 906","termid":"PBO:0053704"}


id: GO:0090442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the degradation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete trehalose catabolism in response to heat stress (obsolete GO:0090442)","synonyms":[{"name":"trehalose catabolic process in response to heat stress","type":"exact"}],"termid":"GO:0090442"}


id: PBO:0044496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle regulator of NHEJ","termid":"PBO:0044496"}


id: PBO:0066825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 124","termid":"PBO:0066825"}


id: PBO:0061151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 3","termid":"PBO:0061151"}


id: PBO:0086697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localizes to endoplasmic reticulum and cytoplasm; null mutant exhibits abnormal lipid metabolic phenotype; predicted to encode a membrane transporter based on phylogenetic analysis; not an essential gene; YJR015W has a paralog, SNG1, that arose from the whole genome duplication","termid":"PBO:0086697"}


id: MONDO:0018416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spastic paraplegia type 59","secondary_identifiers":["MEDGEN:1669596","UMLS:C4750857","GARD:21695","Orphanet:401795"],"synonyms":[{"name":"SPG59","type":"exact"}],"termid":"MONDO:0018416","xrefs":{"Monarch":{"xref_id":"0018416"}}}


id: MONDO:0014019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dystonic disorder in which the cause of the disease is a mutation in the ANO3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal, segmental or multifocal dystonia","termid":"MONDO:0015990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 24","secondary_identifiers":["GARD:17693","OMIM:615034","DOID:0090052","Orphanet:420485","MEDGEN:767288","UMLS:C3554374"],"synonyms":[{"name":"ANO3 dystonic disorder","type":"exact"},{"name":"DYT-ANO3","type":"exact"},{"name":"DYT24","type":"exact"},{"name":"cranio-cervical dystonia with laryngeal and upper-limb involvement","type":"related"},{"name":"dystonia 24","type":"exact"},{"name":"dystonia type 24","type":"exact"},{"name":"dystonic disorder caused by mutation in ANO3","type":"exact"}],"termid":"MONDO:0014019","xrefs":{"Monarch":{"xref_id":"0014019"}}}


id: MOD:00901
data:
  {"annotated_genes":["SJAG_02522","SJAG_00733"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80800,81058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00050"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-alanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00733":null,"SJAG_02522":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-alanine residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"ModAla","type":"exact"}],"termid":"MOD:00901","terms_by_termid":{"MOD:00050":null}}


id: PR:O14132
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pit1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation protein kinase pit1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.06c","synonyms":[{"name":"Spom972h-pit1","type":"exact"}],"termid":"PR:O14132"}


id: MONDO:0005444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete leishmaniasis (obsolete MONDO:0005444)","termid":"MONDO:0005444","xrefs":{"Monarch":{"xref_id":"0005444"}}}


id: GO:0005632
data:
  {"annotated_genes":["SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87857],"is_not":false,"summary":null,"term":"GO:0005632"}]},"cv_name":"cellular_component","definition":"Either of the two innermost layers of the spore wall, as described in Saccharomyces.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ascospore wall","termid":"GO:0005619"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"inner layer of spore wall","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005632","terms_by_termid":{"GO:0005632":null}}


id: PR:Q09867
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- efg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein efg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.02","synonyms":[{"name":"Spom972h-efg1","type":"exact"}],"termid":"PR:Q09867"}


id: GO:0044059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of a endocrine process, any of the hormonal, neural, and secretory processes that release products into the blood or lymph, in the host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host endocrine process (obsolete GO:0044059)","synonyms":[{"name":"regulation by symbiont of host endocrine process","type":"exact"}],"termid":"GO:0044059"}


id: PBO:0034799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex subunit Ufd1 (predicted)","termid":"PBO:0034799"}


id: MONDO:0016867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 2 disorder","termid":"MONDO:0700009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 2","secondary_identifiers":["MEDGEN:1825960","Orphanet:261771","UMLS:C5679650","GARD:20790"],"synonyms":[{"name":"partial deletion of chromosome type 2","type":"exact"},{"name":"partial monosomy of chromosome 2","type":"exact"}],"termid":"MONDO:0016867","xrefs":{"Monarch":{"xref_id":"0016867"}}}


id: PBO:0069712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 992, pseudogene","termid":"PBO:0069712"}


id: PBO:0045410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 12","termid":"PBO:0045410"}


id: GO:1905277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial tube formation.","definition_xrefs":["PMID:25745997","GO_REF:0000058","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of epithelial tube formation","termid":"GO:1905276"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"epithelial tube formation","termid":"GO:0072175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial tube formation","synonyms":[{"name":"down regulation of epithelial tube formation","type":"exact"},{"name":"down-regulation of epithelial tube formation","type":"exact"},{"name":"downregulation of epithelial tube formation","type":"exact"},{"name":"inhibition of epithelial tube formation","type":"narrow"}],"termid":"GO:1905277"}


id: GO:0075055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of symbiont penetration peg formation for entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"modulation of penetration peg formation","termid":"GO:0075054"},{"relation_name":"is_a","term_name":"positive regulation by symbiont of entry into host","termid":"GO:0075294"},{"relation_name":"positively_regulates","term_name":"penetration peg formation","termid":"GO:0075053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of penetration peg formation","secondary_identifiers":["GO:0075059"],"synonyms":[{"name":"positive regulation of symbiont penetration peg formation for entry into host","type":"narrow"},{"name":"positive regulation of symbiont penetration peg initiation","type":"narrow"}],"termid":"GO:0075055"}


id: GO:0070439
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptional repressor complex that contains a heterodimer of the bHLH-ZIP proteins Mad and Max, plus mSin3A, a homolog of the yeast Sin3p.","definition_xrefs":["PMID:7889570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"Mad-Max-mSin3A complex","termid":"GO:0070439"}


id: PBO:0091087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orc3","termid":"PBO:0091087"}


id: MONDO:0011548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ataxic cerebral palsy","termid":"MONDO:0000397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral palsy, ataxic, autosomal recessive","secondary_identifiers":["ICD9:343.8","OMIM:605388"],"synonyms":[{"name":"Acp","type":"related"},{"name":"ataxic cerebral palsy","type":"related"},{"name":"cerebral palsy ataxic","type":"related"},{"name":"cerebral palsy, ataxic, autosomal recessive","type":"exact"}],"termid":"MONDO:0011548","xrefs":{"Monarch":{"xref_id":"0011548"}}}


id: PBO:0049376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 6","termid":"PBO:0049376"}


id: PBO:0051872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily containing leucine rich repeat 2","termid":"PBO:0051872"}


id: PBO:0076147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUN domain containing ossification factor","termid":"PBO:0076147"}


id: GO:0042775
data:
  {"annotated_genes":["SJAG_04152","SJAG_00601","SJAG_01077","SJAG_MIT20","SJAG_00260","SJAG_MIT03","SJAG_02744","SJAG_00976","SJAG_07007","SJAG_MIT13","SJAG_MIT04","SJAG_01671","SJAG_07006","SJAG_00755","SJAG_02646","SJAG_03920","SJAG_03490","SJAG_02398","SJAG_01490","SJAG_00080","SJAG_01763","SJAG_05629","SJAG_02504","SJAG_01355","SJAG_01190"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114532,115761,119380,108594,76632,114961,72377,119352,74650,79218,119330],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006123"},{"annotations":[113162],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006120"},{"annotations":[89158,89526,113502,117056],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006121"},{"annotations":[76631,119357,113709,117986,104392,72449,76188,74066,61897,76034],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006122"}]},"cv_name":"biological_process","definition":"The transfer of electrons through a series of electron donors and acceptors, generating energy that is ultimately used for synthesis of ATP, as it occurs in the mitochondrial inner membrane or chloroplast thylakoid membrane.","definition_xrefs":["GOC:mtg_sensu","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP synthesis coupled electron transport","termid":"GO:0042773"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00260":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01671":null,"SJAG_01763":null,"SJAG_02398":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03490":null,"SJAG_03920":null,"SJAG_04152":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"mitochondrial ATP synthesis coupled electron transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial electron transport","type":"broad"},{"name":"organelle ATP synthesis coupled electron transport","type":"broad"}],"termid":"GO:0042775","terms_by_termid":{"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null}}


id: SO:0001202
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ambisense_RNA_virus is a ss_RNA_viral_sequence that is the sequence of a single stranded RNA virus with both messenger and anti messenger polarity.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ss_RNA_viral_sequence","termid":"SO:0001199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ambisense_ssRNA_viral_sequence","synonyms":[{"name":"ambisense single stranded RNA virus","type":"exact"},{"name":"ambisense ssRNA viral sequence","type":"exact"}],"termid":"SO:0001202"}


id: MONDO:0000690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Preoccupations with appearance or self-image causing significant distress or impairment in important areas of functioning.","definition_xrefs":["MESH:D057215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatoform disorder","termid":"MONDO:0003117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"body dysmorphic disorder","secondary_identifiers":["MEDGEN:2302","icd11.foundation:731724655","DOID:0060163","ICD10CM:F45.22","SCTID:83482000","UMLS:C0005887"],"synonyms":[{"name":"body dysmorphia","type":"exact"},{"name":"dysmorphic syndrome","type":"exact"},{"name":"dysmorphophobia","type":"exact"}],"termid":"MONDO:0000690","xrefs":{"Monarch":{"xref_id":"0000690"}}}


id: PBO:0087234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sensor-transducer of the stress-activated PKC1-MPK1 signaling pathway; involved in maintenance of cell wall integrity and recovery from heat shock; required for the arrest of secretion response; WSC2 has a paralog, WSC3, that arose from the whole genome duplication","termid":"PBO:0087234"}


id: GO:0098031
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small disk located at the base of some icosahedral virus capsids.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid, collar","termid":"GO:0098031"}


id: GO:0016594
data:
  {"annotated_genes":["SJAG_03861"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74551],"is_not":false,"summary":null,"term":"GO:0016594"}]},"cv_name":"molecular_function","definition":"Binding to glycine, aminoethanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"glycine binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Gly binding","type":"exact"},{"name":"aminoacetic acid binding","type":"exact"},{"name":"aminoethanoic acid binding","type":"exact"}],"termid":"GO:0016594","terms_by_termid":{"GO:0016594":null}}


id: PBO:0044614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 16","termid":"PBO:0044614"}


id: PBO:0027011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_positive_regulation_of_protein_kinase_activity","termid":"PBO:0027011"}


id: GO:0016065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The specific immune response mediated by antibodies. As in, but not restricted to, the taxon Protostomia (Protostomia, ncbi_taxonomy_id:33317).","definition_xrefs":["GOC:jid","GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete humoral defense mechanism (sensu Protostomia) (obsolete GO:0016065)","synonyms":[{"name":"humoral defence mechanism (sensu Protostomia)","type":"exact"},{"name":"humoral defense mechanism (sensu Protostomia)","type":"exact"}],"termid":"GO:0016065"}


id: GO:0035573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The trimethylation of the N-terminal serine of proteins to form the derivative N,N,N-trimethylserine.","definition_xrefs":["PMID:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-serine methylation","termid":"GO:0035570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-serine trimethylation","termid":"GO:0035573"}


id: FYPO:0007499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at one or more cohesin-associated regions (CARs) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah","PMID:27226485","PMID:31895039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"increased chromatin binding at cohesin associated regions","synonyms":[{"name":"increased chromatin binding at CARs","type":"exact"},{"name":"increased chromatin binding at cohesin associated regions during mitotic cell cycle","type":"related"},{"name":"increased chromatin binding at cohesin associated regions during vegetative growth","type":"exact"}],"termid":"FYPO:0007499"}


id: SO:0001976
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme recognition site that, when cleaved, results in 3 prime overhangs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_sticky_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"three prime sticky end restriction enzyme cleavage site","type":"exact"}],"termid":"SO:0001976"}


id: MONDO:0010377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 13, X-linked","secondary_identifiers":["MEDGEN:335097","UMLS:C1845096","OMIM:300613","MESH:C564473"],"synonyms":[{"name":"MYP13","type":"exact"},{"name":"myopia 13","type":"exact"},{"name":"myopia 13, X-linked","type":"exact"}],"termid":"MONDO:0010377","xrefs":{"Monarch":{"xref_id":"0010377"}}}


id: GO:0043737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage at apurinic or apyrimidinic sites to products with a 5'-phosphate.","definition_xrefs":["EC:3.1.21.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"deoxyribonuclease V activity","secondary_identifiers":["MetaCyc:3.1.21.7-RXN"],"synonyms":[{"name":"DNase V activity","type":"related"},{"name":"Escherichia coli endodeoxyribonuclease V activity","type":"narrow"},{"name":"endodeoxyribonuclease V","type":"exact"},{"name":"endonuclease V activity","type":"broad"}],"termid":"GO:0043737"}


id: GO:0036191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indolin-2-one + NAD(P)H + H+ + O2 = 3-hydroxyindolin-2-one + NAD(P)+ + H2O.","definition_xrefs":["RHEA:31919","EC:1.14.14.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indolin-2-one monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R07421"],"synonyms":[{"name":"indolin-2-one,NAD(P)H:oxygen oxidoreductase (3-hydroxylating)","type":"related"}],"termid":"GO:0036191"}


id: PBO:0030450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_lysine_and_cysteine","termid":"PBO:0030450"}


id: PBO:0047804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box K1","termid":"PBO:0047804"}


id: PATO:0001654
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning with respect to an additional entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alignment","termid":"PATO:0001652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misaligned with","synonyms":[{"name":"misaligned ","type":"exact"},{"name":"unaligned with","type":"exact"}],"termid":"PATO:0001654"}


id: GO:0045684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epidermis development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermis development","termid":"GO:0045682"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"epidermis development","termid":"GO:0008544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epidermis development","synonyms":[{"name":"activation of epidermis development","type":"narrow"},{"name":"positive regulation of epidermal development","type":"exact"},{"name":"positive regulation of hypodermis development","type":"related"},{"name":"stimulation of epidermis development","type":"narrow"},{"name":"up regulation of epidermis development","type":"exact"},{"name":"up-regulation of epidermis development","type":"exact"},{"name":"upregulation of epidermis development","type":"exact"}],"termid":"GO:0045684"}


id: PBO:0054595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1998","termid":"PBO:0054595"}


id: GO:1903848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aorta morphogenesis.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","PMID:22269326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aorta morphogenesis","termid":"GO:1903847"},{"relation_name":"is_a","term_name":"negative regulation of artery morphogenesis","termid":"GO:1905652"},{"relation_name":"negatively_regulates","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aorta morphogenesis","synonyms":[{"name":"down regulation of aorta morphogenesis","type":"exact"},{"name":"down-regulation of aorta morphogenesis","type":"exact"},{"name":"downregulation of aorta morphogenesis","type":"exact"},{"name":"inhibition of aorta morphogenesis","type":"narrow"}],"termid":"GO:1903848"}


id: GO:0051035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of DNA, deoxyribonucleic acid, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid transmembrane transporter activity","termid":"GO:0051032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"DNA transmembrane transporter activity","termid":"GO:0051035"}


id: MONDO:0024478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesenchymal hamartoma","secondary_identifiers":["MEDGEN:83108","UMLS:C0334090","NCIT:C40427"],"synonyms":[{"name":"mesenchymal hamartoma","type":"exact"}],"termid":"MONDO:0024478","xrefs":{"Monarch":{"xref_id":"0024478"}}}


id: PBO:0025467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family plus-end microtubule motor Cut7","termid":"PBO:0025467"}


id: GO:0039562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host STAT (signal transducer and activator of transcription). STATs are SH2 domain-containing proteins which lie downstream of many signaling receptors. Upon phosphorylation by JAKs, STAT proteins hetero- or homo-dimerize and translocate to the nucleus to activate transcription of target genes.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of STAT activity","synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of STAT activity","type":"narrow"},{"name":"inhibition by virus of host STAT activity","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of STAT activity","type":"exact"},{"name":"suppression by virus of host STAT activity","type":"exact"},{"name":"suppression by virus of host signal transducer and activator of transcription activity","type":"exact"}],"termid":"GO:0039562"}


id: MONDO:0975832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 127","secondary_identifiers":["OMIM:620977"],"termid":"MONDO:0975832","xrefs":{"Monarch":{"xref_id":"0975832"}}}


id: PBO:0018289
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mid1 function is not conserved between pombe and japonicus","termid":"PBO:0018289"}


id: FYPO:0001870
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of centromeres and associated kinetochores into a cluster at the nuclear periphery is normal (i.e. indistinguishable from wild type). Centromere-kinetochore complexes normally cluster near the old spindle pole body during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal centromere clustering at nuclear periphery","synonyms":[{"name":"normal centromere clustering at SPB","type":"related"},{"name":"normal centromere clustering at nuclear periphery during interphase of mitotic cell cycle","type":"exact"},{"name":"normal centromere clustering at nuclear periphery during mitotic cell cycle","type":"exact"},{"name":"normal centromere clustering at nuclear periphery during vegetative growth","type":"exact"},{"name":"normal centromere clustering at spindle pole body","type":"related"},{"name":"normal centromere-SPB clustering","type":"related"},{"name":"normal kinetochore clustering at SPB","type":"related"},{"name":"normal kinetochore clustering at spindle pole body","type":"related"},{"name":"normal kinetochore localization at spindle pole body","type":"related"}],"termid":"FYPO:0001870"}


id: PBO:0030396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleus:cytoplasm_ratio","termid":"PBO:0030396"}


id: GO:0032112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of protein histidine kinase activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein histidine kinase activity (obsolete GO:0032112)","synonyms":[{"name":"down regulation of protein histidine kinase activity","type":"exact"},{"name":"down-regulation of protein histidine kinase activity","type":"exact"},{"name":"downregulation of protein histidine kinase activity","type":"exact"},{"name":"inhibition of protein histidine kinase activity","type":"narrow"},{"name":"protein histidine kinase inhibitor","type":"related"}],"termid":"GO:0032112"}


id: PBO:0076725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCL1 family AKT coactivator A","termid":"PBO:0076725"}


id: PBO:0091886
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat/KM 2.3x10^4 min-1 M-1","termid":"PBO:0091886"}


id: PBO:0004382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36","termid":"PBO:0004382"}


id: PBO:0042248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 10","termid":"PBO:0042248"}


id: GO:0046978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the TAP1 subunit of TAP (transporter associated with antigen processing) protein.","definition_xrefs":["PMID:11133832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TAP binding","termid":"GO:0046977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"TAP1 binding","termid":"GO:0046978"}


id: GO:0015667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + DNA cytosine = S-adenosyl-L-homocysteine + DNA N4-methylcytosine.","definition_xrefs":["EC:2.1.1.113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"DNA-methyltransferase activity","termid":"GO:0009008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"site-specific DNA-methyltransferase (cytosine-N4-specific) activity","secondary_identifiers":["RHEA:16857","MetaCyc:2.1.1.113-RXN"],"synonyms":[{"name":"DNA[cytosine-N4]methyltransferase activity","type":"related"},{"name":"N(4)-cytosine-specific DNA methylase activity","type":"related"},{"name":"N4-cytosine-specific DNA methylase activity","type":"related"},{"name":"S-adenosyl-L-methionine:DNA-cytosine 4-N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:DNA-cytosine N4-methyltransferase activity","type":"related"},{"name":"m4C-forming MTase activity","type":"related"},{"name":"modification methylase activity","type":"related"},{"name":"restriction-modification system activity","type":"related"}],"termid":"GO:0015667"}


id: MONDO:0020687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymal tumor arising from the supratentorial region of the brain.","definition_xrefs":["NCIT:C131611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymal tumor of brain","termid":"MONDO:0004245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"supratentorial ependymal tumor","secondary_identifiers":["MEDGEN:1379596","UMLS:C4331360"],"synonyms":[{"name":"supratentorial ependymal tumor","type":"exact"}],"termid":"MONDO:0020687","xrefs":{"Monarch":{"xref_id":"0020687"}}}


id: PBO:0041520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C16orf46 divergent transcript","termid":"PBO:0041520"}


id: PBO:0116631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 4 pseudogene 4","termid":"PBO:0116631"}


id: GO:0030590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs during the first cell cycle in an embryo, in which anterior cortical contractions culminate in a single partial constriction of the embryo called the pseudocleavage furrow. An example of this process is found in nematode worms.","definition_xrefs":["GOC:mtg_sensu","PMID:7729583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudocleavage","termid":"GO:0030588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"first cell cycle pseudocleavage","termid":"GO:0030590"}


id: FYPO:0006717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sodium chloride, usually at a higher level than in standard media.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0000257","FYPO:0002057","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on sodium chloride","synonyms":[{"name":"normal cell population growth in presence of sodium chloride","type":"exact"},{"name":"normal cell population growth on sodium chloride","type":"exact"},{"name":"normal cellular response to sodium chloride","type":"related"},{"name":"normal growth on NaCl","type":"exact"},{"name":"normal vegetative cell population growth on sodium chloride","type":"exact"}],"termid":"FYPO:0006717"}


id: PBO:0055567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3003","termid":"PBO:0055567"}


id: GO:0016045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a bacterium is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterium","termid":"GO:0009617"},{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of bacterium","secondary_identifiers":["GO:0009598","GO:0009681"],"synonyms":[{"name":"detection of bacteria","type":"exact"},{"name":"perception of bacteria","type":"related"},{"name":"perception of bacterium","type":"related"}],"termid":"GO:0016045"}


id: MONDO:0054776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial focal epilepsy with variable foci","termid":"MONDO:0020310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial focal, with variable foci 4","secondary_identifiers":["MEDGEN:1644614","DOID:0081424","OMIM:617935","UMLS:C4693694"],"synonyms":[{"name":"FFEVF4","type":"related"},{"name":"epilepsy, FAMILIAL focal, with variable foci 4","type":"related"}],"termid":"MONDO:0054776","xrefs":{"Monarch":{"xref_id":"0054776"}}}


id: GO:1990053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 5-methylcytosine + H2O = DNA with abasic site + 5-methylcytosine. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the DNA 5-methylcytosine and the deoxyribose sugar to remove the 5-methylcytosine, leaving an abasic site.","definition_xrefs":["PMID:23316050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylbase DNA N-glycosylase activity","termid":"GO:0003905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"DNA-5-methylcytosine glycosylase activity","termid":"GO:1990053"}


id: PBO:0081282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 57","termid":"PBO:0081282"}


id: PBO:0073849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A3 antisense RNA 1","termid":"PBO:0073849"}


id: MONDO:0031031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 77","secondary_identifiers":["OMIM:619988","MEDGEN:1823966","DOID:0081236","UMLS:C5774193"],"synonyms":[{"name":"MRT77","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 77","type":"exact"}],"termid":"MONDO:0031031","xrefs":{"Monarch":{"xref_id":"0031031"}}}


id: PBO:0062193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily R member 2 pseudogene","termid":"PBO:0062193"}


id: MONDO:1011026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly and cerebellar hypoplasia that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly and cerebellar hypoplasia, non-human animal","termid":"MONDO:1010247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lissencephaly and cerebellar hypoplasia, sheep","secondary_identifiers":["OMIA:001867-9940"],"termid":"MONDO:1011026","xrefs":{"Monarch":{"xref_id":"1011026"}}}


id: GO:0000493
data:
  {"annotated_genes":["SJAG_03551","SJAG_03125"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77011,80576],"is_not":false,"summary":null,"term":"GO:0000493"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and a box H/ACA snoRNA to form a box H/ACA small nucleolar ribonucleoprotein (snoRNP) complex.","definition_xrefs":["GOC:krc","PMID:12515383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small nucleolar ribonucleoprotein complex assembly","termid":"GO:0000491"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03125":null,"SJAG_03551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"box H/ACA snoRNP assembly","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"box H/ACA small nucleolar ribonucleoprotein complex assembly","type":"exact"}],"termid":"GO:0000493","terms_by_termid":{"GO:0000493":null}}


id: PBO:0082198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoinase; converts allantoin to allantoate in the first step of allantoin degradation; expression sensitive to nitrogen catabolite repression","termid":"PBO:0082198"}


id: MONDO:0011210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein Tim12, yeast, homolog of","secondary_identifiers":["OMIM:602252","UMLS:C1865698","MEDGEN:400824"],"synonyms":[{"name":"mitochondrial intermembrane space protein Tim12, yeast, homolog of","type":"exact"}],"termid":"MONDO:0011210","xrefs":{"Monarch":{"xref_id":"0011210"}}}


id: PBO:0055396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2826","termid":"PBO:0055396"}


id: PBO:0084687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial component of the ERMES complex; links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; required for mitophagy; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0084687"}


id: MONDO:0011841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"thiamine-responsive dysfunction syndrome","termid":"MONDO:0000152"},{"relation_name":"is_a","term_name":"basal ganglia disorder","termid":"MONDO:0003996"},{"relation_name":"is_a","term_name":"toxic encephalopathy","termid":"MONDO:0005527"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"biotin-responsive basal ganglia disease","secondary_identifiers":["SCTID:723557004","Orphanet:199348","icd11.foundation:1776831202","MESH:C537658","ICD9:333.99","DOID:0050659","OMIM:607483","MEDGEN:375289","GARD:10237","Orphanet:65284","UMLS:C1843807","SCTID:703522009"],"synonyms":[{"name":"BBGD","type":"exact"},{"name":"BTBGD","type":"exact"},{"name":"THMD2","type":"related"},{"name":"basal ganglia disease, biotin-responsive","type":"related"},{"name":"biotin-thiamine-responsive basal ganglia disease","type":"exact"},{"name":"encephalopathy, thiamine-responsive","type":"related"},{"name":"thiamine metabolism dysfunction syndrome 2 (biotin- or thiamine-responsive encephalopathy type 2)","type":"exact"},{"name":"thiamine metabolism dysfunction syndrome 2 (biotin- or thiamine-responsive type)","type":"related"},{"name":"thiamine-responsive encephalopathy","type":"exact"}],"termid":"MONDO:0011841","xrefs":{"Monarch":{"xref_id":"0011841"}}}


id: PBO:0111809
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin family","termid":"PBO:0111809"}


id: PBO:0071242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 83","termid":"PBO:0071242"}


id: PBO:0029725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_separation_after_cytokinesis,_with_abnormal_nuclear_division","termid":"PBO:0029725"}


id: PBO:0086087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein packaged into COPII vesicles for ER to Golgi trafficking; forms a complex with Emp47p that may function in trafficking plasma membrane glycoproteins through early secretory pathway; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0086087"}


id: PBO:0069170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 422, pseudogene","termid":"PBO:0069170"}


id: MONDO:0957281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nemaline myopathy","termid":"MONDO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"nemaline myopathy 5B, autosomal recessive, childhood-onset","secondary_identifiers":["OMIM:620386","MEDGEN:1841181","DOID:0081374","UMLS:C5830545"],"termid":"MONDO:0957281","xrefs":{"Monarch":{"xref_id":"0957281"}}}


id: PBO:0113051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cohesion maintenance factor; involved in sister chromatid condensation and cohesion; colocalizes with cohesin on chromosomes; performs its cohesin maintenance function in pre-anaphase cells by protecting the integrity of the cohesion complex; regulates homolog pairing and facilitates synaptonemal complex formation, axis formation, interhomolog recombination and synapsis during meiosis; relocalizes to the cytosol in response to hypoxia; scaffolding protein contains 26 HEAT repeats","termid":"PBO:0113051"}


id: PBO:0045796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDIL3 divergent transcript","termid":"PBO:0045796"}


id: PBO:0111744
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-fungal Zn(2)-Cys(6) binuclear cluster domain","termid":"PBO:0111744"}


id: PBO:0053597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 624","termid":"PBO:0053597"}


id: GO:0052232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052232)","synonyms":[{"name":"positive aerotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052232"}


id: GO:1990704
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi trans membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of Golgi trans cisterna membrane (obsolete GO:1990704)","synonyms":[{"name":"integral component of trans-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990704"}


id: GO:1902605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a heterotrimeric G-protein complex.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:23637185","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"heterotrimeric G-protein complex assembly","synonyms":[{"name":"heterotrimeric G-protein GTPase activity assembly","type":"related"},{"name":"heterotrimeric G-protein GTPase activity formation","type":"related"},{"name":"heterotrimeric G-protein GTPase, alpha-subunit assembly","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, alpha-subunit formation","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, beta-subunit assembly","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, beta-subunit formation","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, gamma-subunit assembly","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, gamma-subunit formation","type":"narrow"},{"name":"heterotrimeric G-protein complex formation","type":"exact"}],"termid":"GO:1902605"}


id: PBO:0065228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 9","termid":"PBO:0065228"}


id: GO:0009414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to water","termid":"GO:0009415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to water deprivation","synonyms":[{"name":"drought tolerance","type":"related"},{"name":"response to dehydration","type":"exact"},{"name":"response to drought","type":"exact"},{"name":"response to thirst","type":"exact"}],"termid":"GO:0009414"}


id: GO:1902092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fumagillin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23488861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of fumagillin biosynthetic process","termid":"GO:1902090"},{"relation_name":"positively_regulates","term_name":"fumagillin biosynthetic process","termid":"GO:1902086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fumagillin biosynthetic process","synonyms":[{"name":"activation of fumagillin anabolism","type":"exact"},{"name":"activation of fumagillin biosynthesis","type":"exact"},{"name":"activation of fumagillin biosynthetic process","type":"narrow"},{"name":"activation of fumagillin formation","type":"exact"},{"name":"activation of fumagillin synthesis","type":"exact"},{"name":"positive regulation of fumagillin anabolism","type":"exact"},{"name":"positive regulation of fumagillin biosynthesis","type":"exact"},{"name":"positive regulation of fumagillin formation","type":"exact"},{"name":"positive regulation of fumagillin synthesis","type":"exact"},{"name":"up regulation of fumagillin anabolism","type":"exact"},{"name":"up regulation of fumagillin biosynthesis","type":"exact"},{"name":"up regulation of fumagillin biosynthetic process","type":"exact"},{"name":"up regulation of fumagillin formation","type":"exact"},{"name":"up regulation of fumagillin synthesis","type":"exact"},{"name":"up-regulation of fumagillin anabolism","type":"exact"},{"name":"up-regulation of fumagillin biosynthesis","type":"exact"},{"name":"up-regulation of fumagillin biosynthetic process","type":"exact"},{"name":"up-regulation of fumagillin formation","type":"exact"},{"name":"up-regulation of fumagillin synthesis","type":"exact"},{"name":"upregulation of fumagillin anabolism","type":"exact"},{"name":"upregulation of fumagillin biosynthesis","type":"exact"},{"name":"upregulation of fumagillin biosynthetic process","type":"exact"},{"name":"upregulation of fumagillin formation","type":"exact"},{"name":"upregulation of fumagillin synthesis","type":"exact"}],"termid":"GO:1902092"}


id: MONDO:0012812
data:
  {"annotated_genes":["SJAG_01697"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86545],"is_not":false,"summary":null,"term":"MONDO:0012812"}]},"cv_name":"mondo","definition":"Early infantile epileptic encephalopathy 4 (EIEE4) is a form of early infantile epileptic encephalopathy, which refers to a group of neurological conditions characterized by severe seizures beginning in infancy. EIEE4, specifically, is often associated with partial complex or tonic-clonic seizures, although other seizure types have been reported. Other signs and symptoms mayinclude intellectual disability, reduced muscle tone (hypotonia), hypsarrhythmia (an irregular pattern seen on EEG), dyskinesia (involuntary movement of the body), and spastic di- or quadriplegia. EIEE4 is caused by changes (mutations) in the STXBP1 gene and is inherited in an autosomal dominant manner. Treatment is based on the signs and symptoms present in each person. For example, certain medications are often prescribed to help control seizures, although they are not always effective in all people with the condition.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Dravet syndrome","termid":"MONDO:0100135"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12900","DOID:0080436","OMIM:612164","Orphanet:599373","SCTID:768666006","MEDGEN:436917","MESH:C567404","NCIT:C162472","UMLS:C2677326"],"synonyms":[{"name":"DEE4","type":"exact"},{"name":"EIEE4","type":"exact"},{"name":"STXBP1 early infantile epileptic encephalopathy","type":"exact"},{"name":"STXBP1-related early-onset encephalopathy","type":"related"},{"name":"STXBP1-related encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 4","type":"exact"},{"name":"developmental and epileptic encephalopathy, 4","type":"exact"},{"name":"early infantile epileptic encephalopathy 4","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in STXBP1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 4","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 4","type":"exact"}],"termid":"MONDO:0012812","terms_by_termid":{"MONDO:0012812":null},"xrefs":{"Monarch":{"xref_id":"0012812"}}}


id: PBO:0084292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral vacuolar membrane protein; involved in vacuole inheritance and morphology; activates Fab1p kinase activity under basal conditions and also after hyperosmotic shock","termid":"PBO:0084292"}


id: PBO:0030414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistant_to_cell_wall_digestion","termid":"PBO:0030414"}


id: GO:0035763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the dorsal motor nucleus of the vagus nerve. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve morphogenesis","termid":"GO:0035762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal motor nucleus of vagus nerve structural organization","synonyms":[{"name":"dorsal motor nucleus of vagus nerve structural organisation","type":"exact"}],"termid":"GO:0035763"}


id: GO:0033768
data:
  {"annotated_genes":["SJAG_05012","SJAG_01572","SJAG_02299"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91876,97015,110269],"is_not":false,"summary":null,"term":"GO:0033768"}]},"cv_name":"cellular_component","definition":"A nuclear ubiquitin ligase complex that specifically targets SUMOylated proteins; the complex is formed of homodimers or heterodimers of RNF4 family ubiquitin ligases and is conserved in eukaryotes.","definition_xrefs":["PMID:17762865","GOC:vw","PMID:17762864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ubiquitin ligase complex","termid":"GO:0000152"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01572":null,"SJAG_02299":null,"SJAG_05012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"SUMO-targeted ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033768","terms_by_termid":{"GO:0033768":null}}


id: MONDO:0005776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by nematodes of the genus Gnathostoma, which is commonly found in Southeast Asia, and which is transmitted via the consumption of contaminated raw/undercooked birds, eels, fish, frogs, or reptiles. The pattern of symptoms is species-dependent, and extraintestinal manifestations are due to larval migration (e.g., pulmonary infiltrates, eosinophilic meningitis, or painful, pruritic subcutaneous swellings, and peripheral blood eosinophilia).","definition_xrefs":["NCIT:C128395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gnathomiasis","secondary_identifiers":["SCTID:44086001","MEDGEN:6651","MESH:D058429","ICD9:128.1","ICD10CM:B83.1","DOID:11379","EFO:0007289","UMLS:C0018013"],"synonyms":[{"name":"Gnathostoma infection","type":"related"},{"name":"Gnathostomiasis","type":"exact"},{"name":"infectious disease by Gnathostoma","type":"exact"}],"termid":"MONDO:0005776","xrefs":{"Monarch":{"xref_id":"0005776"}}}


id: PBO:0000857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAse MRP","termid":"PBO:0000857"}


id: PBO:0089691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory particle assembly protein Nas2","termid":"PBO:0089691"}


id: PBO:0077524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 238 like","termid":"PBO:0077524"}


id: GO:1902886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of proteasome-activating ATPase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:di","PMID:23995839"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of proteasome-activating ATPase activity (obsolete GO:1902886)","synonyms":[{"name":"down regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down regulation of proteasomal ATPase activity","type":"exact"},{"name":"down regulation of proteasome channel gating activity","type":"narrow"},{"name":"down regulation of proteasome channel opening activity","type":"narrow"},{"name":"down regulation of proteasome-activating ATPase activity","type":"exact"},{"name":"down-regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down-regulation of proteasomal ATPase activity","type":"exact"},{"name":"down-regulation of proteasome channel gating activity","type":"narrow"},{"name":"down-regulation of proteasome channel opening activity","type":"narrow"},{"name":"down-regulation of proteasome-activating ATPase activity","type":"exact"},{"name":"downregulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"downregulation of proteasomal ATPase activity","type":"exact"},{"name":"downregulation of proteasome channel gating activity","type":"narrow"},{"name":"downregulation of proteasome channel opening activity","type":"narrow"},{"name":"downregulation of proteasome-activating ATPase activity","type":"exact"},{"name":"inhibition of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"narrow"},{"name":"inhibition of proteasomal ATPase activity","type":"narrow"},{"name":"inhibition of proteasome channel gating activity","type":"narrow"},{"name":"inhibition of proteasome channel opening activity","type":"narrow"},{"name":"inhibition of proteasome-activating ATPase activity","type":"narrow"},{"name":"negative regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"negative regulation of proteasomal ATPase activity","type":"exact"},{"name":"negative regulation of proteasome channel gating activity","type":"narrow"},{"name":"negative regulation of proteasome channel opening activity","type":"narrow"}],"termid":"GO:1902886"}


id: FYPO:0000665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a peptidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal peptidase activity","synonyms":[{"name":"normal protease activity","type":"exact"}],"termid":"FYPO:0000665"}


id: SOFP:aminoacid
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"amino acid coded for by a tRNA transcript feature","definition_xrefs":["so:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacid","termid":"SOFP:aminoacid"}


id: MONDO:0020119
data:
  {"annotated_genes":["SJAG_00379","SJAG_01448","SJAG_03635","SJAG_02371","SJAG_03286","SJAG_03664","SJAG_04176","SJAG_01581","SJAG_04631","SJAG_05239","SJAG_01465","SJAG_03900","SJAG_00466","SJAG_01047","SJAG_00293","SJAG_04056","SJAG_01540","SJAG_04235","SJAG_00156","SJAG_00992"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010477"},{"annotations":[86233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010561"},{"annotations":[86621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010333"},{"annotations":[87483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010590"},{"annotations":[85436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010407"},{"annotations":[85666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010500"},{"annotations":[85654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030908"},{"annotations":[86274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030909"},{"annotations":[86827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010258"},{"annotations":[86309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010671"},{"annotations":[87240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010457"},{"annotations":[87571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010398"},{"annotations":[87230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010574"},{"annotations":[87407,87408,87406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010355"},{"annotations":[87244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010461"},{"annotations":[87023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010286"},{"annotations":[85430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010665"},{"annotations":[85406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010655"},{"annotations":[86496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010306"},{"annotations":[86269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015601"},{"annotations":[85660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010496"}]},"cv_name":"mondo","definition":"A syndromic intellectual disability with an X-linked mode of inheritance.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"X-linked intellectual disability","termid":"MONDO:0100284"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00293":null,"SJAG_00379":null,"SJAG_00466":null,"SJAG_00992":null,"SJAG_01047":null,"SJAG_01448":null,"SJAG_01465":null,"SJAG_01540":null,"SJAG_01581":null,"SJAG_02371":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03900":null,"SJAG_04056":null,"SJAG_04176":null,"SJAG_04235":null,"SJAG_04631":null,"SJAG_05239":null},"genotype_count":0,"is_obsolete":false,"name":"X-linked syndromic intellectual disability","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:309510","Orphanet:98464","DOID:0060309"],"synonyms":[{"name":"X-linked syndromic intellectual disability","type":"exact"},{"name":"intellectual disability, X-linked syndromic","type":"exact"},{"name":"mental retardation, X-linked syndromic","type":"exact"},{"name":"syndromic X-linked intellectual disability","type":"exact"},{"name":"syndromic X-linked mental retardation","type":"exact"},{"name":"syndromic intellectual disability, X-linked","type":"exact"}],"termid":"MONDO:0020119","terms_by_termid":{"MONDO:0010258":null,"MONDO:0010286":null,"MONDO:0010306":null,"MONDO:0010333":null,"MONDO:0010355":null,"MONDO:0010398":null,"MONDO:0010407":null,"MONDO:0010457":null,"MONDO:0010461":null,"MONDO:0010477":null,"MONDO:0010496":null,"MONDO:0010500":null,"MONDO:0010561":null,"MONDO:0010574":null,"MONDO:0010590":null,"MONDO:0010655":null,"MONDO:0010665":null,"MONDO:0010671":null,"MONDO:0015601":null,"MONDO:0030908":null,"MONDO:0030909":null},"xrefs":{"Monarch":{"xref_id":"0020119"}}}


id: PBO:0085779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the AP180 family, involved in clathrin cage assembly; binds Pan1p and clathrin; YAP1802 has a paralog, YAP1801, that arose from the whole genome duplication","termid":"PBO:0085779"}


id: MONDO:0006953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mother develops antibodies against red blood cell Rhesus antigens. This may lead to potential fetal adverse outcomes such as anemia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood group incompatibility","termid":"MONDO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Rh isoimmunization","secondary_identifiers":["SCTID:44795003","DOID:4175","UMLS:C0035404","MedDRA:10039016","EFO:1001159","MEDGEN:11224"],"synonyms":[{"name":"Rh incompatibility affecting management of mother","type":"exact"}],"termid":"MONDO:0006953","xrefs":{"Monarch":{"xref_id":"0006953"}}}


id: GO:1990347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of adenine misinserted into nascent strand opposite 8-oxoG in the template by adenine DNA glycosylase activity. The reaction leaves an apyrimidinic (AP) site.","definition_xrefs":["PMID:24559510"],"gene_count":0,"genotype_count":0,"name":"obsolete G*/A mismatch-specific adenine-DNA glycosylase activity (obsolete GO:1990347)","synonyms":[{"name":"G*/A mismatch-specific adenine-DNA glycosylase activity","type":"exact"}],"termid":"GO:1990347"}


id: GO:0061799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate = cyclic pyranopterin phosphate + diphosphate.","definition_xrefs":["PMID:25896388","GOC:ik","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"cyclic pyranopterin monophosphate synthase activity","secondary_identifiers":["RHEA:49580","MetaCyc:RXN-17809","EC:4.6.1.17"],"termid":"GO:0061799"}


id: GO:0141104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances a G protein-coupled receptor signal transduction pathway in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:15963708","PMID:25332123","PMID:18978047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated activation of host signal transduction pathway","termid":"GO:0052028"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host G protein-coupled receptor signal transduction pathway","termid":"GO:0075118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host G protein-coupled receptor signal transduction","termid":"GO:0141104"}


id: MONDO:0044876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete drug hypersensitivity syndrome (obsolete MONDO:0044876)","termid":"MONDO:0044876","xrefs":{"Monarch":{"xref_id":"0044876"}}}


id: PBO:0039625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A8","termid":"PBO:0039625"}


id: PBO:0066233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 41","termid":"PBO:0066233"}


id: GO:0021711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature unipolar brush cell in the cerebellum. Differentiation includes the processes involved in commitment of a neuroblast to a unipolar brush cell fate. A unipolar brush cell is a glutamatergic interneuron found in the cerebellar cortex.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","PMID:15157725","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar unipolar brush cell differentiation","termid":"GO:0021711"}


id: PBO:0017906
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sSuppressor for K-252a Sensitivity","termid":"PBO:0017906"}


id: PBO:0085729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the regulation of cell wall synthesis; proposed to be involved in coordinating cell cycle progression with cell wall integrity","termid":"PBO:0085729"}


id: PBO:0001334
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residue","termid":"PBO:0001334"}


id: GO:1903959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anion transmembrane transport.","definition_xrefs":["GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transport","termid":"GO:0034765"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transport","termid":"GO:0044070"},{"relation_name":"regulates","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of monoatomic anion transmembrane transport","synonyms":[{"name":"regulation of anion transmembrane transport","type":"broad"}],"termid":"GO:1903959"}


id: GO:0102381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: stevioside + UDP-alpha-D-glucose = H+ + rebaudioside A + UDP.","definition_xrefs":["RHEA:61756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"stevioside glucosyltransferase activity (rebaudioside A forming)","secondary_identifiers":["MetaCyc:RXN-13517"],"termid":"GO:0102381"}


id: GO:0072351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dicarboxylic acids, any organic acid containing three carboxyl (-COOH) groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tricarboxylic acid biosynthetic process","synonyms":[{"name":"tricarboxylate biosynthesis","type":"exact"},{"name":"tricarboxylate biosynthetic process","type":"exact"},{"name":"tricarboxylic acid anabolism","type":"exact"},{"name":"tricarboxylic acid biosynthesis","type":"exact"},{"name":"tricarboxylic acid formation","type":"exact"},{"name":"tricarboxylic acid synthesis","type":"exact"}],"termid":"GO:0072351"}


id: PBO:0054720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2129","termid":"PBO:0054720"}


id: GO:0097216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to guanosine tetraphosphate (5'-ppGpp-3'), a guanosine bisphosphate having diphosphate groups at both the 3' and 5'-positions.","definition_xrefs":["PMID:16968770","PMID:18359660","PMID:15109491","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"guanosine tetraphosphate binding","synonyms":[{"name":"5'-ppGpp-3' binding","type":"exact"}],"termid":"GO:0097216"}


id: FYPO:0005881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ophthalmic acid measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"ophthalmic acid absent from cell","synonyms":[{"name":"ophthalmic acid absent from cell during mitotic cell cycle","type":"related"},{"name":"ophthalmic acid absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0005881"}


id: PBO:0051973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"izumo sperm-oocyte fusion 1","termid":"PBO:0051973"}


id: MONDO:0013839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary sensory and autonomic neuropathy in which the cause of the disease is a mutation in the DST gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy type 6","secondary_identifiers":["DOID:0070151","GARD:12987","Orphanet:314381","UMLS:C3539003","MEDGEN:761278","OMIM:614653"],"synonyms":[{"name":"DST hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"HSAN 6","type":"related"},{"name":"HSAN6","type":"exact"},{"name":"familial dysautonomia with contractures","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy caused by mutation in DST","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type VI","type":"exact"},{"name":"neuropathy, hereditary sensory and autonomic, type 6","type":"related"},{"name":"neuropathy, hereditary sensory and autonomic, type VI","type":"related"}],"termid":"MONDO:0013839","xrefs":{"Monarch":{"xref_id":"0013839"}}}


id: MONDO:0018317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"growth retardation-mild developmental delay-chronic hepatitis syndrome","secondary_identifiers":["MEDGEN:1654119","Orphanet:391366","UMLS:C4751595","GARD:21621"],"termid":"MONDO:0018317","xrefs":{"Monarch":{"xref_id":"0018317"}}}


id: PBO:0061389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 49","termid":"PBO:0061389"}


id: GO:1901299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen peroxide-mediated programmed cell death.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901298"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide-mediated programmed cell death","termid":"GO:0010421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide-mediated programmed cell death","synonyms":[{"name":"down regulation of hydrogen peroxide-mediated programmed cell death","type":"exact"},{"name":"down-regulation of hydrogen peroxide-mediated programmed cell death","type":"exact"},{"name":"downregulation of hydrogen peroxide-mediated programmed cell death","type":"exact"},{"name":"inhibition of hydrogen peroxide-mediated programmed cell death","type":"narrow"}],"termid":"GO:1901299"}


id: PBO:0043221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Leyden crystal galectin","termid":"PBO:0043221"}


id: PBO:0002400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia induced family protein","termid":"PBO:0002400"}


id: PBO:0036075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K14_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036075"}


id: PR:Q9USX0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pvg3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USX0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase pvg3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.06c","synonyms":[{"name":"PvGal synthesis protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pvg3","type":"exact"},{"name":"meiotically up-regulated gene 49 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pyruvylated Gal-beta-1,3-epitope synthesis protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USX0"}


id: PBO:0068713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 2, pseudogene","termid":"PBO:0068713"}


id: PBO:0050348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 51","termid":"PBO:0050348"}


id: PBO:0002700
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possibly related to human/mouse periphilin","termid":"PBO:0002700"}


id: GO:0043411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to myopalladin, a myofibrillar protein with titin-like Ig domains.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete myopalladin binding (obsolete GO:0043411)","synonyms":[{"name":"myopalladin binding","type":"exact"}],"termid":"GO:0043411"}


id: MONDO:0020044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive metabolic cerebellar ataxia","secondary_identifiers":["MEDGEN:1842756","Orphanet:98096","UMLS:C5681517","GARD:19413"],"termid":"MONDO:0020044","xrefs":{"Monarch":{"xref_id":"0020044"}}}


id: PBO:0030676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_size","termid":"PBO:0030676"}


id: PBO:0048298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase alpha, neutral C","termid":"PBO:0048298"}


id: MONDO:0016158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of narcolepsy characterized by excessive day-time sleepiness associated with uncontrollable sleep urges and cataplexy (loss of muscle tone often triggered by pleasant emotions).","definition_xrefs":["Orphanet:2073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"narcolepsy","termid":"MONDO:0021107"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy-cataplexy syndrome","secondary_identifiers":["UMLS:C0751362","ICD10CM:G47.419","MedDRA:10028713","ICD10CM:G47.4","icd11.foundation:1851015159","MEDGEN:199638","GARD:7162","ICD9:347.0"],"synonyms":[{"name":"Gelineau disease","type":"exact"},{"name":"Gelineau syndrome","type":"exact"},{"name":"Gelineau's syndrome","type":"exact"},{"name":"Gélineau disease","type":"exact"},{"name":"narcolepsy type 1","type":"exact"},{"name":"narcolepsy with cataplexy","type":"exact"},{"name":"narcolepsy-cataplexy syndrome","type":"exact"},{"name":"narcoleptic syndrome","type":"related"}],"termid":"MONDO:0016158","xrefs":{"Monarch":{"xref_id":"0016158"}}}


id: PBO:0047898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(q21.2)","termid":"PBO:0047898"}


id: PBO:0085420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; involved in efflux of fluconazole, diazaborine, benomyl, methotrexate, and other drugs; expression induced in cells treated with the mycotoxin patulin; relocalizes from nucleus to plasma membrane upon DNA replication stress","termid":"PBO:0085420"}


id: PBO:0066561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh associated glycoprotein","termid":"PBO:0066561"}


id: GO:0043306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mast cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of mast cell degranulation","termid":"GO:0043304"},{"relation_name":"positively_regulates","term_name":"mast cell degranulation","termid":"GO:0043303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of mast cell degranulation","synonyms":[{"name":"activation of mast cell degranulation","type":"narrow"},{"name":"positive regulation of mast cell granule exocytosis","type":"exact"},{"name":"stimulation of mast cell degranulation","type":"narrow"},{"name":"up regulation of mast cell degranulation","type":"exact"},{"name":"up-regulation of mast cell degranulation","type":"exact"},{"name":"upregulation of mast cell degranulation","type":"exact"}],"termid":"GO:0043306"}


id: MONDO:0700052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abscess contained between the internal and external anal sphincters.","direct_ancestors":[{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intersphincteric abscess","secondary_identifiers":["UMLS:C0341384","MEDGEN:574358","SCTID:235795007"],"termid":"MONDO:0700052","xrefs":{"Monarch":{"xref_id":"0700052"}}}


id: FYPO:0008115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing sorbitol as the carbon source.","definition_xrefs":["PMID:15537393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000003","FYPO:0002058","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"increased cell population growth on sorbitol carbon source","termid":"FYPO:0008115"}


id: GO:0033632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of cell-cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"is_a","term_name":"regulation of cell adhesion mediated by integrin","termid":"GO:0033628"},{"relation_name":"regulates","term_name":"cell-cell adhesion mediated by integrin","termid":"GO:0033631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell-cell adhesion mediated by integrin","synonyms":[{"name":"regulation of cell-cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033632"}


id: FYPO:0003469
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which small nuclear RNA (snRNA) splicing is normal (i.e. indistinguishable from wild type). All snRNA splicing may be normal, or one splicing of or more specific snRNA molecules may be specifically assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA splicing","termid":"FYPO:0003468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"normal snRNA splicing","synonyms":[{"name":"normal snRNA splicing during mitotic cell cycle","type":"related"},{"name":"normal snRNA splicing during vegetative growth","type":"exact"}],"termid":"FYPO:0003469"}


id: PBO:0046692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine kinase 1","termid":"PBO:0046692"}


id: GO:0035920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a high voltage-gated calcium channel in another organism. A high voltage-gated channel is a channel whose open state is dependent on high voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:bf","PMID:20920515","GOC:fj","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of high voltage-gated calcium channel activity in another organism (obsolete GO:0035920)","synonyms":[{"name":"down-regulation of high voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"downregulation of high voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"inhibition of high voltage-gated calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of high voltage gated calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of high voltage-dependent calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of high voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035920"}


id: GO:0106191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of inorganic cations linked to oxidoreductase reactions.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inogranic cations linked to oxidoreductase reactions (obsolete GO:0106191)","termid":"GO:0106191"}


id: PBO:0001115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase subunit Rfp2","termid":"PBO:0001115"}


id: PBO:0042120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 192","termid":"PBO:0042120"}


id: PBO:0028669
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Kms1_foci_during_response_to_DNA_damage","termid":"PBO:0028669"}


id: PBO:0068840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 78, pseudogene","termid":"PBO:0068840"}


id: PBO:0110831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription repressor, glucose sensing, Scr1","termid":"PBO:0110831"}


id: GO:1903805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-valine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","GOC:TermGenie","PMID:23895341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-valine transmembrane transport","termid":"GO:1903785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-valine import across plasma membrane","secondary_identifiers":["GO:0090468"],"synonyms":[{"name":"L-valine import into cell","type":"exact"},{"name":"valine import","type":"narrow"}],"termid":"GO:1903805"}


id: FYPO:0007334
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing does not occur at centromere outer repeat regions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere outer repeat","termid":"FYPO:0002346"},{"relation_name":"is_a","term_name":"abolished chromatin silencing","termid":"FYPO:0007333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished chromatin silencing at centromere outer repeat","synonyms":[{"name":"abolished chromatin silencing at centromere otr","type":"exact"},{"name":"abolished chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"abolished chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"abolished chromatin silencing at pericentric region","type":"related"},{"name":"abolished chromatin silencing at pericentromeric region","type":"related"},{"name":"abolished heterochromatin silencing at centromere outer repeat region","type":"exact"},{"name":"chromatin silencing at centromere outer repeat abolished","type":"exact"}],"termid":"FYPO:0007334"}


id: PBO:0041368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 46","termid":"PBO:0041368"}


id: MONDO:0002834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urothelial carcinoma that arises from the urothelial lining of the prostatic ducts or the prostatic urethra.","definition_xrefs":["NCIT:C39898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate carcinoma","termid":"MONDO:0005159"},{"relation_name":"is_a","term_name":"transitional cell carcinoma","termid":"MONDO:0006474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"primary prostate urothelial carcinoma","secondary_identifiers":["UMLS:C1514430","MEDGEN:271382","DOID:4011"],"synonyms":[{"name":"primary prostate urothelial cancer","type":"exact"},{"name":"primary prostate urothelial carcinoma","type":"exact"},{"name":"prostate gland transitional cell carcinoma","type":"exact"},{"name":"prostate transitional cell carcinoma","type":"exact"},{"name":"prostate urothelial carcinoma","type":"exact"},{"name":"transitional cell carcinoma of prostate","type":"exact"},{"name":"transitional cell carcinoma of the prostate","type":"exact"}],"termid":"MONDO:0002834","xrefs":{"Monarch":{"xref_id":"0002834"}}}


id: MONDO:0009848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dissecting cellulitis of the scalp is a rare chronic suppurative dermatosis of the scalp that mainly affects black men and that is characterized by multiple painful inflammatory follicular and perifollicular nodules, pustules, and abscesses that interconnect via sinus tracts and eventually result in scarring alopecia.","definition_xrefs":["Orphanet:345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dissecting cellulitis of the scalp","secondary_identifiers":["MESH:C562486","ICD9:704.8","MedDRA:10056961","icd11.foundation:872245808","GARD:1883","UMLS:C0263506","OMIM:260910","MEDGEN:78097","SCTID:77333008"],"synonyms":[{"name":"dissecting cellulitis of the scalp","type":"exact"},{"name":"perifolliculitis capitis ABSCEDENS ET SUFFODIENS, familial","type":"related"}],"termid":"MONDO:0009848","xrefs":{"Monarch":{"xref_id":"0009848"}}}


id: PBO:0045732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EAF1 antisense RNA 1","termid":"PBO:0045732"}


id: PBO:0038676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 2B","termid":"PBO:0038676"}


id: GO:0033519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytyl diphosphate, (2E)-3,7,11,15-tetramethylhexadec-2-en-1-yl trihydrogen diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phytyl diphosphate metabolic process","synonyms":[{"name":"phytyl diphosphate metabolism","type":"exact"}],"termid":"GO:0033519"}


id: PBO:0060525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0060525"}


id: PBO:0109827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTT co-chaperone complex LRR repeat subunit Tel2","termid":"PBO:0109827"}


id: PBO:0066887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 187","termid":"PBO:0066887"}


id: GO:0010263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tricyclic triterpenoid compounds, terpenoids with 6 isoprene units and 3 carbon rings.","definition_xrefs":["GOC:ct"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricyclic triterpenoid metabolic process","termid":"GO:0010683"},{"relation_name":"is_a","term_name":"triterpenoid biosynthetic process","termid":"GO:0016104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"tricyclic triterpenoid biosynthetic process","synonyms":[{"name":"tricyclic triterpenoid anabolism","type":"exact"},{"name":"tricyclic triterpenoid biosynthesis","type":"exact"},{"name":"tricyclic triterpenoid formation","type":"exact"},{"name":"tricyclic triterpenoid synthesis","type":"exact"}],"termid":"GO:0010263"}


id: PBO:0026738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_positive_regulation_of_DNA-directed_DNA_polymerase_activity","termid":"PBO:0026738"}


id: PBO:0080182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDAC2 pseudogene 3","termid":"PBO:0080182"}


id: PBO:0056562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance 9 homologous recombination repair factor","termid":"PBO:0056562"}


id: MONDO:0859177
data:
  {"annotated_genes":["SJAG_03693"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86716],"is_not":false,"summary":null,"term":"MONDO:0859177"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03693":null},"genotype_count":0,"is_obsolete":false,"name":"VISS syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619472","MEDGEN:1794165","UMLS:C5561955"],"termid":"MONDO:0859177","terms_by_termid":{"MONDO:0859177":null},"xrefs":{"Monarch":{"xref_id":"0859177"}}}


id: GO:1901796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction by p53 class mediator.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of signal transduction by p53 class mediator","secondary_identifiers":["Reactome:R-HSA-5633007"],"termid":"GO:1901796"}


id: MONDO:0007944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Treacher-Collins syndrome in which the cause of the disease is a mutation in the TCOF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Treacher-Collins syndrome","termid":"MONDO:0002457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Treacher Collins syndrome 1","secondary_identifiers":["OMIM:154500","DOID:0080789"],"synonyms":[{"name":"TCOF1 Treacher-Collins syndrome","type":"exact"},{"name":"TCS1","type":"related"},{"name":"TREACHER COLLINS syndrome 1","type":"related"},{"name":"Treacher Collins syndrome","type":"related"},{"name":"Treacher Collins syndrome type 1","type":"exact"},{"name":"Treacher Collins-Franceschetti syndrome","type":"related"},{"name":"Treacher-Collins syndrome 1","type":"exact"},{"name":"Treacher-Collins syndrome caused by mutation in TCOF1","type":"exact"},{"name":"mandibulofacial dysostosis","type":"related"}],"termid":"MONDO:0007944","xrefs":{"Monarch":{"xref_id":"0007944"}}}


id: SO:0000034
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Morpholino oligos are synthesized from four different Morpholino subunits, each of which contains one of the four genetic bases (A, C, G, T) linked to a 6-membered morpholine ring. Eighteen to 25 subunits of these four subunit types are joined in a specific order by non-ionic phosphorodiamidate intersubunit linkages to give a Morpholino.","direct_ancestors":[{"relation_name":"has_quality","term_name":"morpholino_backbone","termid":"SO:0001183"},{"relation_name":"is_a","term_name":"synthetic_oligo","termid":"SO:0001247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morpholino_oligo","synonyms":[{"name":"morphant","type":"broad"},{"name":"morpholino","type":"exact"},{"name":"morpholino oligo","type":"exact"}],"termid":"SO:0000034"}


id: MONDO:0850333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anaplastic astrocytoma lacking mutations in IDH1 or IDH2 genes.","definition_xrefs":["DOID:0080876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaplastic astrocytoma","termid":"MONDO:0016684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"IDH-wildtype anaplastic astrocytoma","secondary_identifiers":["NCIT:C129291"],"termid":"MONDO:0850333","xrefs":{"Monarch":{"xref_id":"0850333"}}}


id: MONDO:0009722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bailey-Bloch congenital myopathy is a neuromuscular disorder characterized by weakness, arthrogryposis, kyphoscoliosis, short stature, cleft palate, ptosis and susceptibility to malignant hyperthermia during anesthesia.","definition_xrefs":["Orphanet:168572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"Bailey-Bloch congenital myopathy","secondary_identifiers":["MEDGEN:340586","OMIM:255995","SCTID:723439002","GARD:8432","MESH:C538343","UMLS:C1850625","DOID:0060346"],"synonyms":[{"name":"Bailey-Bloch congenital myopathy","type":"exact"},{"name":"NAM","type":"related"},{"name":"Native American myopathy","type":"exact"},{"name":"STAC3 disorder","type":"exact"},{"name":"congenital myopathy - cleft palate - malignant hyperthermia","type":"related"},{"name":"congenital myopathy cleft palate and malignant hyperthermia","type":"related"},{"name":"congenital myopathy-cleft palate-malignant hyperthermia syndrome","type":"exact"},{"name":"myopathy, congenital, baily-bloch","type":"exact"},{"name":"myopathy, congenital, with cleft palate and malignant hyperthermia","type":"related"}],"termid":"MONDO:0009722","xrefs":{"Monarch":{"xref_id":"0009722"}}}


id: MONDO:0005329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vascular sarcoma (obsolete MONDO:0005329)","termid":"MONDO:0005329","xrefs":{"Monarch":{"xref_id":"0005329"}}}


id: GO:0015145
data:
  {"annotated_genes":["SJAG_03608","SJAG_02719","SJAG_03820","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055056"},{"annotations":[110957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005354"},{"annotations":[103299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015149"},{"annotations":[114483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[117512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a monosaccharide from one side of a membrane to the other.","definition_xrefs":["GOC:jl","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar transmembrane transporter activity","termid":"GO:0051119"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02719":null,"SJAG_03608":null,"SJAG_03820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"monosaccharide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0015145","terms_by_termid":{"GO:0005354":null,"GO:0005358":null,"GO:0015149":null,"GO:0055056":null,"GO:0140108":null}}


id: PBO:0091056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C3HC-type containing RNA export factor Rsm1","termid":"PBO:0091056"}


id: PBO:0084692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial dicarboxylate carrier; integral membrane protein, catalyzes a dicarboxylate-phosphate exchange across the inner mitochondrial membrane, transports cytoplasmic dicarboxylates into the mitochondrial matrix","termid":"PBO:0084692"}


id: GO:0048255
data:
  {"annotated_genes":["SJAG_03696","SJAG_00797","SJAG_03283","SJAG_02573","SJAG_04825","SJAG_04946"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71033,89827],"is_not":false,"summary":null,"term":"GO:0048255"},{"annotations":[79148,79085,90532,100415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"}]},"cv_name":"biological_process","definition":"Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"is_a","term_name":"RNA stabilization","termid":"GO:0043489"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_02573":null,"SJAG_03283":null,"SJAG_03696":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"mRNA stabilization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0048255","terms_by_termid":{"GO:0048255":null,"GO:0070935":null}}


id: PBO:0013044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triacylglycerol lipase ptl2","termid":"PBO:0013044"}


id: GO:1904686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic spindle disassembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25963819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"regulates","term_name":"mitotic spindle disassembly","termid":"GO:0051228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic spindle disassembly","synonyms":[{"name":"regulation of mitotic spindle breakdown","type":"exact"},{"name":"regulation of mitotic spindle catabolism","type":"exact"},{"name":"regulation of mitotic spindle degradation","type":"exact"},{"name":"regulation of spindle breakdown during mitosis","type":"exact"},{"name":"regulation of spindle degradation during mitosis","type":"exact"},{"name":"regulation of spindle disassembly during mitosis","type":"exact"}],"termid":"GO:1904686"}


id: MONDO:0970944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leigh syndrome, mitochondrial","secondary_identifiers":["OMIM:500017"],"termid":"MONDO:0970944","xrefs":{"Monarch":{"xref_id":"0970944"}}}


id: PBO:0045917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 12","termid":"PBO:0045917"}


id: PBO:0112645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAse P component","termid":"PBO:0112645"}


id: GO:0099620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-4-amino-4-deoxy-beta-L-arabinopyranose + 2-oxoglutarate = UDP-beta-L-threo-pentapyranos-4-ulose + L-glutamate.","definition_xrefs":["GOC:al","PMID:12429098","GOC:dos","PMID:12704196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"UDP-4-amino-4-deoxy-L-arabinose aminotransferase","secondary_identifiers":["EC:2.6.1.87","RHEA:24710"],"synonyms":[{"name":"UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase","type":"exact"},{"name":"UDP-4-amino-4-deoxy-L-arabinose---oxoglutarate aminotransferase","type":"exact"},{"name":"UDP-4-amino-4-deoxy-beta-L-arabinose:2-oxoglutarate aminotransferase","type":"exact"},{"name":"UDP-Ara4O aminotransferase","type":"exact"},{"name":"UDP-L-Ara4N transaminase","type":"exact"}],"termid":"GO:0099620"}


