# terms

id: MONDO:0017851
data:
  {"annotated_genes":["SJAG_02488"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033014"}]},"cv_name":"mondo","definition":"A rare genetic chronic skin disorder characterized by hyperkeratosis and transient erythema.","definition_xrefs":["NCIT:C84696"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Papillon-Lefevre disease","termid":"MONDO:0009490"},{"relation_name":"excluded_subClassOf","term_name":"obsolete erythrokeratoderma variabilis progressiva (obsolete MONDO:0017681)","termid":"MONDO:0017681"},{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"erythrokeratoderma","termid":"MONDO:0019270"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythrokeratodermia variabilis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D056266","MESH:C536154","UMLS:C0265961","DOID:0050467","Orphanet:308166","MEDGEN:75587","OMIMPS:133200","GARD:16528","Orphanet:316","Orphanet:317","SCTID:70041004","icd11.foundation:551200965","MedDRA:10049048","NORD:1285"],"synonyms":[{"name":"Darier-Gottron disease","type":"exact"},{"name":"EKV","type":"exact"},{"name":"EKVP","type":"related"},{"name":"Ichthyosis, Erythrokeratodermia Variabilis","type":"exact"},{"name":"erythrokeratodermia figurata variabilis","type":"exact"},{"name":"erythrokeratodermia figurata, congenital familial, in plaques","type":"related"},{"name":"erythrokeratodermia progressiva symmetrica","type":"exact"},{"name":"erythrokeratodermia variabilis","type":"exact"},{"name":"erythrokeratodermia variabilis ET progressiva","type":"related"},{"name":"erythrokeratodermia variabilis with erythema Gyratum Repens","type":"related"},{"name":"erythrokeratodermia variabilis with erythema gyratum repens","type":"related"},{"name":"erythrokeratodermia variabilis, Mendes da Costa type","type":"exact"},{"name":"erythrokeratodermia, progressive symmetric","type":"related"},{"name":"keratoderma palmoplantaris transgrediens","type":"related"},{"name":"keratosis extremitatum hereditaria progrediens","type":"related"},{"name":"keratosis palmoplantaris transgrediens et progrediens","type":"related"},{"name":"progressive symmetric erythrokeratodermia","type":"exact"},{"name":"progressive symmetric erythrokeratodermia, Gottron type","type":"exact"}],"termid":"MONDO:0017851","terms_by_termid":{"MONDO:0033014":null},"xrefs":{"Monarch":{"xref_id":"0017851"}}}


id: MONDO:0023415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fungal infection by any of the Candida species that is present at birth.","definition_xrefs":["NCIT:C116811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidiasis","termid":"MONDO:0002026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital candidiasis","secondary_identifiers":["UMLS:C0343875","SCTID:276672007","MEDGEN:575892"],"synonyms":[{"name":"Congenital Candidiasis","type":"related"},{"name":"Congenital candidiasis","type":"related"},{"name":"Congenital candidosis","type":"related"},{"name":"congenital candidiasis","type":"exact"}],"termid":"MONDO:0023415","xrefs":{"Monarch":{"xref_id":"0023415"}}}


id: GO:0036290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of a residue on an identical protein. For example, phosphorylation by the other kinase within a homodimer.","definition_xrefs":["GOC:jsg","PMID:20516151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein trans-autophosphorylation","synonyms":[{"name":"trans-autophosphorylation","type":"exact"}],"termid":"GO:0036290"}


id: MONDO:0016009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal trimethadione syndrome is a drug-related embryofetopathy that can occur when an embryo/fetus is exposed to trimethadione and that is characterized by pre- and post-natal growth retardation, intellectual deficit, developmental and speech delay, craniofacial anomalies (with some similarities to those seen in fetal valproate syndrome), and less commonly, cleft palate, malformations of the heart, urogenital system and limbs. Trimethadione is an antiepileptic drug that has been removed from the market in Europe and is no longer used much in other countries due to teratogenicity and potential side effects.","definition_xrefs":["Orphanet:1913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal trimethadione syndrome","secondary_identifiers":["MESH:C537798","GARD:18750","SCTID:66351003","UMLS:C0265373","icd11.foundation:1743242235","ICD9:759.89","MEDGEN:120538"],"termid":"MONDO:0016009","xrefs":{"Monarch":{"xref_id":"0016009"}}}


id: MONDO:0012471
data:
  {"annotated_genes":["SJAG_01884"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85529],"is_not":false,"summary":null,"term":"MONDO:0012471"}]},"cv_name":"mondo","definition":"Any Aicardi-Goutieres syndrome in which the cause of the disease is a mutation in the RNASEH2C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Aicardi-Goutieres syndrome","termid":"MONDO:0018866"},{"relation_name":"is_a","term_name":"RNASEH2C-related type 1 interferonopathy","termid":"MONDO:0700258"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01884":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"Aicardi-Goutieres syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C563683","MEDGEN:324389","NANDO:2200895","GARD:15479","OMIM:610329","UMLS:C1835916"],"synonyms":[{"name":"AGS3","type":"related"},{"name":"Aicardi-Goutieres syndrome 3","type":"exact"},{"name":"Aicardi-Goutieres syndrome caused by mutation in RNASEH2C","type":"exact"},{"name":"Aicardi-Goutieres syndrome type 3","type":"exact"},{"name":"RNASEH2C -related Aicardi-Goutieres syndrome","type":"related"},{"name":"RNASEH2C Aicardi-Goutieres syndrome","type":"exact"}],"termid":"MONDO:0012471","terms_by_termid":{"MONDO:0012471":null},"xrefs":{"Monarch":{"xref_id":"0012471"}}}


id: PBO:0064160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IIE","termid":"PBO:0064160"}


id: PBO:0055375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2804","termid":"PBO:0055375"}


id: GO:0007371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the area where the ventral midline will form is specified.","definition_xrefs":["GOC:vk","GOC:bf","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"ventral midline development","termid":"GO:0007418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral midline determination","secondary_identifiers":["GO:0007372","GO:0007373"],"synonyms":[{"name":"determination of anterior border of ventral midline","type":"narrow"},{"name":"determination of posterior border of ventral midline","type":"narrow"}],"termid":"GO:0007371"}


id: PBO:0084916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Modulator of cell separation and mitotic exit; inhibits separation through Ub-dependent Ace2p proteolysis; part of a daughter-specific switch induced by the mitotic exit network that inhibits exit and resets the cell cycle after the execution of  MEN function, blocking Tem1p and Cdc15 association; required for chromosome stability and multiple mitotic checkpoints; regulated by SCF; haploid transcription regulated by Ste12p; contains 12 degenerate leucine-rich repeat motifs and an atypical F-box","termid":"PBO:0084916"}


id: PBO:0047014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A17","termid":"PBO:0047014"}


id: GO:0050747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of lipoprotein metabolic process","termid":"GO:0050746"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipoprotein metabolic process","synonyms":[{"name":"activation of lipoprotein metabolic process","type":"narrow"},{"name":"positive regulation of lipoprotein metabolism","type":"exact"},{"name":"stimulation of lipoprotein metabolic process","type":"narrow"},{"name":"up regulation of lipoprotein metabolic process","type":"exact"},{"name":"up-regulation of lipoprotein metabolic process","type":"exact"},{"name":"upregulation of lipoprotein metabolic process","type":"exact"}],"termid":"GO:0050747"}


id: GO:1901980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inward rectifier potassium channel activity.","definition_xrefs":["GOC:TermGenie","PMID:23449501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inward rectifier potassium channel activity","termid":"GO:1901979"},{"relation_name":"is_a","term_name":"positive regulation of voltage-gated potassium channel activity","termid":"GO:1903818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of inward rectifier potassium channel activity","synonyms":[{"name":"activation of Kir channel activity","type":"exact"},{"name":"activation of inward rectifier potassium channel activity","type":"narrow"},{"name":"positive regulation of Kir channel activity","type":"exact"},{"name":"up regulation of Kir channel activity","type":"exact"},{"name":"up regulation of inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of Kir channel activity","type":"exact"},{"name":"up-regulation of inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of Kir channel activity","type":"exact"},{"name":"upregulation of inward rectifier potassium channel activity","type":"exact"}],"termid":"GO:1901980"}


id: SO:1000063
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The nucleotide change in the codon triplet changes the stop codon, causing an elongated transcript sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000063 sequence_variant_causing_terminator_codon_change_in_transcript (obsolete SO:1000063)","synonyms":[{"name":"mutation causing terminator codon change in transcript","type":"related"},{"name":"sequence variant causing terminator codon change in transcript","type":"exact"}],"termid":"SO:1000063"}


id: PBO:0090559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase Mok13","termid":"PBO:0090559"}


id: PBO:0024805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enables","termid":"PBO:0024805"}


id: GO:1902039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of seed dormancy process.","definition_xrefs":["GOC:TermGenie","PMID:23378449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of seed dormancy process","termid":"GO:2000033"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"seed dormancy process","termid":"GO:0010162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of seed dormancy process","synonyms":[{"name":"down regulation of seed dormancy","type":"related"},{"name":"down regulation of seed dormancy process","type":"exact"},{"name":"down-regulation of seed dormancy","type":"related"},{"name":"down-regulation of seed dormancy process","type":"exact"},{"name":"downregulation of seed dormancy","type":"related"},{"name":"downregulation of seed dormancy process","type":"exact"},{"name":"inhibition of seed dormancy","type":"related"},{"name":"inhibition of seed dormancy process","type":"narrow"},{"name":"negative regulation of seed dormancy","type":"related"}],"termid":"GO:1902039"}


id: GO:0033346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate 2-oxosuccinamate.","definition_xrefs":["MetaCyc:PWY-4002","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine catabolic process","termid":"GO:0006530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"asparagine catabolic process via 2-oxosuccinamate","termid":"GO:0033346"}


id: PBO:0066035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 4","termid":"PBO:0066035"}


id: GO:0004149
data:
  {"annotated_genes":["SJAG_03163"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76164],"is_not":false,"summary":null,"term":"GO:0004149"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + dihydrolipoamide = CoA + S-succinyldihydrolipoamide.","definition_xrefs":["EC:2.3.1.61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-succinyltransferase activity","termid":"GO:0016751"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03163":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"dihydrolipoyllysine-residue succinyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9858590","Reactome:R-HSA-9853512","RHEA:15213"],"synonyms":[{"name":"dihydrolipoamide S-succinyltransferase activity","type":"exact"},{"name":"dihydrolipoamide succinyltransferase activity","type":"related"},{"name":"dihydrolipoic transsuccinylase activity","type":"related"},{"name":"dihydrolipolyl transsuccinylase activity","type":"related"},{"name":"dihydrolipoyl transsuccinylase activity","type":"related"},{"name":"enzyme-dihydrolipoyllysine:succinyl-CoA S-succinyltransferase activity","type":"related"},{"name":"lipoate succinyltransferase (Escherichia coli) activity","type":"related"},{"name":"lipoate succinyltransferase activity","type":"related"},{"name":"lipoic transsuccinylase activity","type":"related"},{"name":"lipoyl transsuccinylase activity","type":"related"},{"name":"succinyl-CoA:dihydrolipoamide S-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:dihydrolipoate S-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:enzyme-6-N-(dihydrolipoyl)lysine S-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:enzyme-N6-(dihydrolipoyl)lysine S-succinyltransferase activity","type":"related"}],"termid":"GO:0004149","terms_by_termid":{"GO:0004149":null}}


id: GO:0008818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosylcobinamide-GDP + alpha-ribazole-5'-phosphate = adenosylcobalamin-5'-phosphate + GMP.","definition_xrefs":["MetaCyc:COBALAMIN5PSYN-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016780"],"is_obsolete":false,"name":"cobalamin 5'-phosphate synthase activity","secondary_identifiers":["RHEA:23560"],"termid":"GO:0008818"}


id: PBO:0047987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member D, pseudogene","termid":"PBO:0047987"}


id: GO:0150159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-34 production.","definition_xrefs":["PMID:26754294","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-34 production","termid":"GO:0150157"},{"relation_name":"negatively_regulates","term_name":"interleukin-34 production","termid":"GO:0150155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-34 production","secondary_identifiers":["GO:0150162"],"synonyms":[{"name":"negative regulation of interleukin-34 biosynthetic process","type":"narrow"}],"termid":"GO:0150159"}


id: SO:0001680
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory region that is involved in the control of the process of translation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation_regulatory_region","synonyms":[{"name":"translation regulatory region","type":"exact"}],"termid":"SO:0001680"}


id: MONDO:0971068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Phelan-McDermid syndrome","termid":"MONDO:0011652"},{"relation_name":"is_a","term_name":"chromosome 22q deletion","termid":"MONDO:0022760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phelan-McDermid syndrome due to 22q13.3 deletion","secondary_identifiers":["Orphanet:662169"],"termid":"MONDO:0971068","xrefs":{"Monarch":{"xref_id":"0971068"}}}


id: PBO:0069736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1017, pseudogene","termid":"PBO:0069736"}


id: GO:2000400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thymocyte aggregation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte cell-cell adhesion","termid":"GO:1903039"},{"relation_name":"is_a","term_name":"regulation of thymocyte aggregation","termid":"GO:2000398"},{"relation_name":"positively_regulates","term_name":"thymocyte aggregation","termid":"GO:0071594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of thymocyte aggregation","synonyms":[{"name":"positive regulation of T cell precursor aggregation","type":"exact"},{"name":"positive regulation of immature T cell aggregation","type":"related"},{"name":"positive regulation of immature T-cell aggregation","type":"related"},{"name":"positive regulation of immature T-lymphocyte aggregation","type":"exact"},{"name":"positive regulation of thymic lymphocyte aggregation","type":"exact"}],"termid":"GO:2000400"}


id: GO:1903477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any actin filament bundle assembly that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:vw","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring actin filament bundle assembly","termid":"GO:0071519"},{"relation_name":"is_a","term_name":"mitotic actomyosin contractile ring assembly actin filament organization","termid":"GO:1903479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0007049","GO:0044085","GO:0007010","GO:0008150","GO:0000281"],"is_obsolete":false,"name":"mitotic contractile ring actin filament bundle assembly","synonyms":[{"name":"actin filament bundle assembly involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903477"}


id: PR:Q10058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F5.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase C1F5.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.03c","synonyms":[{"name":"Spom972h-SPAC1F5.03c","type":"exact"}],"termid":"PR:Q10058"}


id: GO:0071601
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear body that is found in the germinal vesicles of amphibian oocytes, and consist of three major parts: a remarkably spherical body about 5-10 pm in diameter, smaller spherical or nearly spherical granules on the surface, and inclusions of various sizes that strongly resemble the surface granules. The parts of the sphere organelle have distinct compositions, including splicing snRNAs and proteins.","definition_xrefs":["PMID:8349728","PMID:7758244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005654","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"sphere organelle","termid":"GO:0071601"}


id: PR:P28758
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A superoxide dismutase [Cu-Zn] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00397","PANTHER:PTHR10003:SF11","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase [Cu-Zn] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.10c","secondary_identifiers":["UniProtKB:P28758"],"synonyms":[{"name":"Spom972h-SOD1","type":"exact"}],"termid":"PR:P28758"}


id: PBO:0083053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diacylglycerol pyrophosphate (DGPP) phosphatase; zinc-regulated vacuolar membrane-associated lipid phosphatase, dephosphorylates DGPP to phosphatidate (PA) and Pi, then PA to diacylglycerol; involved in lipid signaling and cell metabolism","termid":"PBO:0083053"}


id: PBO:0077760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20 pseudogene 2","termid":"PBO:0077760"}


id: MONDO:1012439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ear necrosis syndrome, non-human animal","termid":"MONDO:1011709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear necrosis syndrome, pig","secondary_identifiers":["OMIA:001711-9823"],"termid":"MONDO:1012439","xrefs":{"Monarch":{"xref_id":"1012439"}}}


id: PBO:0063389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 6","termid":"PBO:0063389"}


id: GO:0071043
data:
  {"annotated_genes":["SJAG_04360","SJAG_03745","SJAG_02622","SJAG_01521","SJAG_00701","SJAG_01830","SJAG_03939","SJAG_01064","SJAG_04321","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75431,78049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071034"},{"annotations":[115679,70680,103304,71242,118418,100095,113062,112164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071039"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving cryptic unstable transcripts (CUTs), which are transcribed from intergenic regions. Many intergenic regions are heavily transcribed, but the transcripts are rarely detected due to rapid degradation by the nuclear exosome.","definition_xrefs":["PMID:15935759","GOC:krc","PMID:16973436","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00701":null,"SJAG_01064":null,"SJAG_01521":null,"SJAG_01830":null,"SJAG_02622":null,"SJAG_03745":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04321":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CUT metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0071043","terms_by_termid":{"GO:0071034":null,"GO:0071039":null}}


id: PBO:0044781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,4-dienoyl-CoA reductase 1","termid":"PBO:0044781"}


id: PBO:0047757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate hydrolase 1B (pseudogene)","termid":"PBO:0047757"}


id: MONDO:0957462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary tuberculosis","termid":"MONDO:0006052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary pulmonary tuberculosis","secondary_identifiers":["Orphanet:645814","icd11.foundation:882244568"],"termid":"MONDO:0957462","xrefs":{"Monarch":{"xref_id":"0957462"}}}


id: GO:0043299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules by a leukocyte.","definition_xrefs":["GO_REF:0000022","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"regulated exocytosis","termid":"GO:0045055"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"leukocyte degranulation","synonyms":[{"name":"immune cell degranulation","type":"exact"},{"name":"immune cell granule exocytosis","type":"exact"},{"name":"leucocyte degranulation","type":"exact"},{"name":"leukocyte granule exocytosis","type":"exact"}],"termid":"GO:0043299"}


id: PBO:0113207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial fission factor (mitofissin) essential for mitophagy; required for Dmn1p-mediated mitochondrial fission; directly binds to lipid membranes and brings about lipid membrane fragility to facilitate membrane fission; S. pombe homolog complements null mutant","termid":"PBO:0113207"}


id: SO:0001602
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that changes the translational product with respect to the reference.","direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_change_of_translational_product_variant","synonyms":[{"name":"complex change of translational product variant","type":"exact"}],"termid":"SO:0001602"}


id: MONDO:1012365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Laron dwarfism, non-human animal","termid":"MONDO:1011958"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Laron dwarfism, cattle","secondary_identifiers":["OMIA:001323-9913"],"termid":"MONDO:1012365","xrefs":{"Monarch":{"xref_id":"1012365"}}}


id: PR:Q9P6M9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1610.02c","secondary_identifiers":["UniProtKB:Q9P6M9"],"synonyms":[{"name":"Spom972h-rplA","type":"exact"}],"termid":"PR:Q9P6M9"}


id: PBO:0017042
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PantoThenate Kinase","termid":"PBO:0017042"}


id: PBO:0108880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1 complex Tor2 interacting protein 1","termid":"PBO:0108880"}


id: MONDO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-heritable difficulty in distinguishing colors.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color vision disorder","termid":"MONDO:0001703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired color blindness","secondary_identifiers":["ICD9:368.55","NCIT:C118712","SCTID:71676008","ICD10CM:H53.52","UMLS:C0155018","MEDGEN:57828","DOID:13912"],"synonyms":[{"name":"acquired color vision deficiencies","type":"exact"},{"name":"acquired color vision deficiency","type":"exact"},{"name":"acquired color vision disorder","type":"exact"},{"name":"acquired colour vision deficiencies","type":"exact"},{"name":"acquired colour vision deficiency","type":"exact"},{"name":"acquired colour vision disorder","type":"exact"}],"termid":"MONDO:0001828","xrefs":{"Monarch":{"xref_id":"0001828"}}}


id: PBO:0073460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein A3, pseudogene","termid":"PBO:0073460"}


id: GO:0018337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via L-2',4',5'-topaquinone (obsolete GO:0018337)","synonyms":[{"name":"enzyme active site formation via L-2',4',5'-topaquinone","type":"exact"}],"termid":"GO:0018337"}


id: GO:2000307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tumor necrosis factor (ligand) superfamily member 11 production.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"tumor necrosis factor (ligand) superfamily member 11 production","termid":"GO:0072535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of tumor necrosis factor (ligand) superfamily member 11 production","synonyms":[{"name":"regulation of RANKL production","type":"exact"},{"name":"regulation of TNFSF11 production","type":"exact"}],"termid":"GO:2000307"}


id: GO:0086039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A calcium-transporting P-type ATPase activity involved in regulation of the plasma membrane potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type calcium transporter activity","termid":"GO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"P-type calcium transporter activity involved in regulation of cardiac muscle cell membrane potential","synonyms":[{"name":"calcium-transporting ATPase activity involved in regulation of cardiac muscle cell membrane potential","type":"exact"}],"termid":"GO:0086039"}


id: PBO:0057404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548i-1","termid":"PBO:0057404"}


id: MONDO:1012262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stringhalt, non-human animal","termid":"MONDO:1011631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stringhalt, cattle","secondary_identifiers":["OMIA:000950-9913"],"termid":"MONDO:1012262","xrefs":{"Monarch":{"xref_id":"1012262"}}}


id: PBO:0066761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 59","termid":"PBO:0066761"}


id: GO:0010596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell migration","termid":"GO:0010594"},{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"negatively_regulates","term_name":"endothelial cell migration","termid":"GO:0043542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell migration","termid":"GO:0010596"}


id: GO:0030943
data:
  {"annotated_genes":["SJAG_03358","SJAG_01640","SJAG_04996"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73838,74347,79485],"is_not":false,"summary":null,"term":"GO:0030943"}]},"cv_name":"molecular_function","definition":"Binding to a mitochondrion targeting sequence, a specific peptide sequence that acts as a signal to localize the protein within the mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01640":null,"SJAG_03358":null,"SJAG_04996":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005048"],"is_obsolete":false,"name":"mitochondrion targeting sequence binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"mitochondrial targeting sequence binding","type":"exact"}],"termid":"GO:0030943","terms_by_termid":{"GO:0030943":null}}


id: MONDO:0017929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital achiasma is a rare, genetic, non-syndromic cranial nerve and nuclear aplasia malformation characterized by the congenital absence of the optic chiasm, resulting from the failure of the optic nerve fibers to cross over and decussate to the contralateral hemisphere, leading to decreased vision, strabismus and congenital nystagmus in infancy.","definition_xrefs":["Orphanet:324353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital achiasma","secondary_identifiers":["MEDGEN:1392790","SCTID:734031008","UMLS:C4518345","GARD:21438","ICD10CM:H47.4"],"termid":"MONDO:0017929","xrefs":{"Monarch":{"xref_id":"0017929"}}}


id: GO:0051397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of basic amino acid residues at the N-terminal of an oligopeptide or polypeptide chain.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal basic amino acid aminopeptidase activity (obsolete GO:0051397)","synonyms":[{"name":"N-terminal basic amino acid aminopeptidase activity","type":"exact"}],"termid":"GO:0051397"}


id: PBO:0048563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated, gamma adaptin ear containing, ARF binding protein 1","termid":"PBO:0048563"}


id: PBO:0028889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_elongated_multinucleate_cell","termid":"PBO:0028889"}


id: PBO:0070220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 153 pseudogene","termid":"PBO:0070220"}


id: PBO:0054737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2146","termid":"PBO:0054737"}


id: SOFP:citation
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citation","termid":"SOFP:citation"}


id: MONDO:0800112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-atopic asthma (obsolete MONDO:0800112)","termid":"MONDO:0800112","xrefs":{"Monarch":{"xref_id":"0800112"}}}


id: SO:0001409
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region which is intended for use in an experiment.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"region","termid":"SO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biomaterial_region","synonyms":[{"name":"biomaterial region","type":"exact"}],"termid":"SO:0001409"}


id: PBO:0049508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 15","termid":"PBO:0049508"}


id: PBO:0063150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POZ/BTB and AT hook containing zinc finger 1","termid":"PBO:0063150"}


id: PBO:0087859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator involved in maintenance of ion homeostasis; also involved in protection against DNA damage caused by bleomycin and other oxidants; contains a C-terminal leucine-rich repeat","termid":"PBO:0087859"}


id: PBO:0088145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter; exports large neutral amino acids from the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters","termid":"PBO:0088145"}


id: MONDO:0858950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brain disease that is characterized by brain dysfunction caused by an outside force, usually a violent blow to the head.","definition_xrefs":["DOID:0081292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain injury","termid":"MONDO:0043510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traumatic brain injury","termid":"MONDO:0858950","xrefs":{"Monarch":{"xref_id":"0858950"}}}


id: PBO:0054988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2402","termid":"PBO:0054988"}


id: PBO:0073944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 19 member 2","termid":"PBO:0073944"}


id: FYPO:0001497
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable and elongated, and progression through the mitotic cell cycle is arrested in interphase. The cell contains one nucleus and no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"},{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"inviable elongated cell with mitotic cell cycle arrest in interphase","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"elongated inviable cell with mitotic cell cycle arrest in interphase during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell with mitotic cell cycle arrest in interphase","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic interphase","type":"exact"},{"name":"inviable elongated vegetative cell with cell cycle arrest in interphase during mitotic cell cycle","type":"exact"},{"name":"inviable elongated vegetative cell with mitotic cell cycle arrest in interphase","type":"exact"},{"name":"inviable elongated vegetative cell with mitotic interphase arrest","type":"exact"},{"name":"lethal; elongated vegetative cell with mitotic cell cycle arrest in interphase","type":"exact"},{"name":"mitotic cell cycle arrest in interphase with elongated inviable cell","type":"exact"},{"name":"mitotic interphase arrested elongated inviable vegetative cell","type":"exact"}],"termid":"FYPO:0001497","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: GO:0015207
data:
  {"annotated_genes":["SJAG_03777"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112853],"is_not":false,"summary":null,"term":"GO:0015207"}]},"cv_name":"molecular_function","definition":"Enables the transfer of adenine, 6-aminopurine, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transporter activity","termid":"GO:0005345"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"adenine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5672027","Reactome:R-HSA-163215"],"termid":"GO:0015207","terms_by_termid":{"GO:0015207":null}}


id: MONDO:0017681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete erythrokeratoderma variabilis progressiva (obsolete MONDO:0017681)","termid":"MONDO:0017681","xrefs":{"Monarch":{"xref_id":"0017681"}}}


id: GO:0005531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose binding lectin (obsolete GO:0005531)","synonyms":[{"name":"galactose binding lectin","type":"exact"}],"termid":"GO:0005531"}


id: PBO:0080285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 48 pseudogene","termid":"PBO:0080285"}


id: PBO:0080568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and FYVE domain containing 3","termid":"PBO:0080568"}


id: GO:0061666
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of UFM1 to a substrate protein via the reaction X-UFM1 + S = X + S-UFM1, where X is either an E2 or E3 enzyme, the X-UFM1 linkage is a thioester bond, and the S-UFM1 linkage is an isopeptide bond between the C-terminal amino acid of UFM1 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"},{"relation_name":"is_a","term_name":"UFM1 transferase activity","termid":"GO:0071568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0019787","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"UFM1 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061666"}


id: GO:0080103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methylthiopropyl-glucosinolate = 4-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-methylthiopropyl glucosinolate S-oxygenase activity","termid":"GO:0080103"}


id: PBO:0028951
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_morphology_during_recovery_from_stationary_phase","termid":"PBO:0028951"}


id: MONDO:0017334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"12q15q21.1 microdeletion syndrome is a rare chromosomal anomaly syndrome resulting from a partial deletion of the long arm of chromosome 12, with a highly variable phenotype, typically characterized by developmental delay, learning disability, intra-uterine and postnatal growth retardation, and mild facial dysmorphism that changes with age. Nasal speech and hypothyroidism are also associated.","definition_xrefs":["Orphanet:289513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 12","termid":"MONDO:0016877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"12q15q21.1 microdeletion syndrome","secondary_identifiers":["GARD:21141","UMLS:C4518344","SCTID:734030009","MEDGEN:1383455"],"synonyms":[{"name":"Del(12)(q15)(q21.1)","type":"exact"},{"name":"deletion 12q15q21.1","type":"exact"},{"name":"monosomy 12q15q21.1","type":"exact"}],"termid":"MONDO:0017334","xrefs":{"Monarch":{"xref_id":"0017334"}}}


id: FYPO:0002897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"decreased protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0002897"}


id: PBO:0056660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 27","termid":"PBO:0056660"}


id: PBO:0004977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ type DNA helicase Tlh1","termid":"PBO:0004977"}


id: GO:0000402
data:
  {"annotated_genes":["SJAG_04752"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75635],"is_not":false,"summary":null,"term":"GO:0000402"}]},"cv_name":"molecular_function","definition":"Binding to a DNA segment containing the crossed form of a four-way junction, also known as a Holliday junction, a structure where two DNA double strands are held together by reciprocal exchange of two of the four strands, one strand each from the two original helices. The crossed form of a four-way junction cannot be diagrammed without any of the strands crossing over, and instead contains a single crossover between two of the strands.","definition_xrefs":["GOC:krc","PMID:15563464","ISBN:0815332181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"four-way junction DNA binding","termid":"GO:0000400"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04752":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"crossed form four-way junction DNA binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"crossed form Holliday junction binding","type":"exact"}],"termid":"GO:0000402","terms_by_termid":{"GO:0000402":null}}


id: PBO:0063189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 1","termid":"PBO:0063189"}


id: GO:1990683
data:
  {"annotated_genes":["SJAG_04142","SJAG_02837","SJAG_01538"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76293,79692,97046],"is_not":false,"summary":null,"term":"GO:1990683"}]},"cv_name":"biological_process","definition":"A process in which the DNA double-strand breaks are attached to the inner surface of the nuclear envelope proximal to the spindle pole body, or iMTOCs.","definition_xrefs":["PMID:24943839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_02837":null,"SJAG_04142":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"DNA double-strand break attachment to nuclear envelope","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990683","terms_by_termid":{"GO:1990683":null}}


id: GO:0006995
data:
  {"annotated_genes":["SJAG_03309","SJAG_00781","SJAG_03256","SJAG_04725","SJAG_00256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[104146],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901481"},{"annotations":[104149,103115],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901482"},{"annotations":[101704,88192],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nitrogen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"cellular response to nitrogen levels","termid":"GO:0043562"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_00781":null,"SJAG_03256":null,"SJAG_03309":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrogen starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006995","terms_by_termid":{"GO:0031142":null,"GO:1901481":null,"GO:1901482":null,"GO:1905287":null}}


id: PBO:0086447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mannosidase involved in ER-associated protein degradation; localizes to the endoplasmic reticulum; sequence similarity with seven-hairpin glycosidase (GH47) family members, such as Mns1p and Mnl1p, that hydrolyze 1,2-linked alpha-D-mannose residues; non-essential gene","termid":"PBO:0086447"}


id: PBO:0051960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPRID2 divergent transcript","termid":"PBO:0051960"}


id: GO:0009390
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation of dimethyl sulfide from dimethyl sulfoxide.","definition_xrefs":["PMID:21357619","PMID:3280546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"dimethyl sulfoxide reductase complex","synonyms":[{"name":"dimethyl sulphoxide reductase complex","type":"exact"}],"termid":"GO:0009390"}


id: GO:0044228
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The external part of the host cell wall and/or host plasma membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell surface","termid":"GO:0044228"}


id: GO:1901544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ent-pimara-8(14),15-diene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"regulation of ent-pimara-8(14),15-diene biosynthetic process","termid":"GO:1901542"},{"relation_name":"positively_regulates","term_name":"ent-pimara-8(14),15-diene biosynthetic process","termid":"GO:1901541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of ent-pimara-8(14),15-diene biosynthetic process","synonyms":[{"name":"activation of ent-pimara-8(14),15-diene anabolism","type":"narrow"},{"name":"activation of ent-pimara-8(14),15-diene biosynthesis","type":"narrow"},{"name":"activation of ent-pimara-8(14),15-diene biosynthetic process","type":"narrow"},{"name":"activation of ent-pimara-8(14),15-diene formation","type":"narrow"},{"name":"activation of ent-pimara-8(14),15-diene synthesis","type":"narrow"},{"name":"positive regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"positive regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"positive regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"positive regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene synthesis","type":"exact"}],"termid":"GO:1901544"}


id: PATO:0001216
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001216 volume_unit (obsolete PATO:0001216)","termid":"PATO:0001216"}


id: GO:0033757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + acceptor = 3-dehydro-alpha-D-glucosyl-beta-D-fructofuranoside + reduced acceptor.","definition_xrefs":["EC:1.1.99.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucoside 3-dehydrogenase activity","secondary_identifiers":["RHEA:16589","MetaCyc:GLUCOSIDE-3-DEHYDROGENASE-RXN","Wikipedia:Glucoside_3-dehydrogenase"],"synonyms":[{"name":"D-aldohexopyranoside dehydrogenase","type":"related"},{"name":"D-aldohexoside:(acceptor) 3-oxidoreductase","type":"related"},{"name":"D-aldohexoside:acceptor 3-oxidoreductase","type":"related"},{"name":"D-aldohexoside:cytochrome c oxidoreductase","type":"related"},{"name":"hexopyranoside-cytochrome c oxidoreductase","type":"related"}],"termid":"GO:0033757"}


id: PBO:0062807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 7","termid":"PBO:0062807"}


id: GO:1902507
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of thiazole synthase activity.","definition_xrefs":["PMID:12650933","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase complex","termid":"GO:1990228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"thiazole synthase complex","termid":"GO:1902507"}


id: GO:0052713
data:
  {"annotated_genes":["SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol phosphorylceramide + H2O = C26-phytoceramide + phosphorylinositol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphosphingolipid phospholipase activity","termid":"GO:0052712"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"inositol phosphorylceramide phospholipase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052713","terms_by_termid":{"GO:0052714":null}}


id: PBO:0080635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 83","termid":"PBO:0080635"}


id: PBO:0081389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 229","termid":"PBO:0081389"}


id: GO:2000147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell motility.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of locomotion","termid":"GO:0040017"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell motility","termid":"GO:2000145"},{"relation_name":"positively_regulates","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell motility","synonyms":[{"name":"positive regulation of cell locomotion","type":"exact"},{"name":"positive regulation of cell movement","type":"related"},{"name":"positive regulation of movement of a cell","type":"exact"}],"termid":"GO:2000147"}


id: FYPO:0005118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a lower extent than normal when the cell is subject to nitrogen starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription","termid":"FYPO:0002876"},{"relation_name":"is_a","term_name":"decreased gene expression during nitrogen starvation","termid":"FYPO:0006550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased transcription during nitrogen starvation","synonyms":[{"name":"decreased transcription during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased transcription during nitrogen depletion","type":"exact"},{"name":"decreased transcription during nitrogen deprivation","type":"exact"},{"name":"decreased transcription during nitrogen limitation","type":"exact"},{"name":"decreased transcription in response to nitrogen starvation","type":"exact"},{"name":"decreased transcriptional response to nitrogen starvation","type":"exact"},{"name":"reduced transcription during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005118"}


id: MONDO:0100002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign inflammatory colitis caused by a non-IgE-mediated immune reaction to ingested food proteins.","definition_xrefs":["PMID:17584315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal allergy","termid":"MONDO:0000777"},{"relation_name":"is_a","term_name":"proctocolitis","termid":"MONDO:0024278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"food protein-induced allergic proctocolitis","secondary_identifiers":["UMLS:C4750318","MEDGEN:1663071"],"synonyms":[{"name":"FPIPC","type":"exact"},{"name":"allergic proctocolitis","type":"broad"},{"name":"milk protein proctocololitis","type":"narrow"}],"termid":"MONDO:0100002","xrefs":{"Monarch":{"xref_id":"0100002"}}}


id: GO:0033328
data:
  {"annotated_genes":["SJAG_03781"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90770],"is_not":false,"summary":null,"term":"GO:0033328"}]},"cv_name":"molecular_function","definition":"Binding to a peroxisomal membrane targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome membrane.","definition_xrefs":["GOC:rb","PMID:17020786","PMID:15133130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome targeting sequence binding","termid":"GO:0000268"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0003674","GO:0005048","GO:0005488"],"is_obsolete":false,"name":"peroxisome membrane targeting sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PMP targeting signal (mPTS) binding","type":"exact"},{"name":"PMP targeting signal binding","type":"exact"},{"name":"mPTS binding","type":"exact"},{"name":"peroxisomal membrane protein (PMP) targeting signal (mPTS) binding","type":"exact"}],"termid":"GO:0033328","terms_by_termid":{"GO:0033328":null}}


id: PBO:0075093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 142","termid":"PBO:0075093"}


id: MONDO:1012488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ACTH-independent adrenal Cushing syndrome, non-human animal","termid":"MONDO:1011681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTH-independent adrenal Cushing syndrome, dog","secondary_identifiers":["OMIA:001937-9615"],"termid":"MONDO:1012488","xrefs":{"Monarch":{"xref_id":"1012488"}}}


id: MONDO:0006086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign soft tissue neoplasm characterized by the presence of neoplastic spindle and stellate cells, and vascular proliferation in a myxoid stroma.","definition_xrefs":["NCIT:C3254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue neoplasm","termid":"MONDO:0021581"},{"relation_name":"is_a","term_name":"benign soft tissue neoplasm","termid":"MONDO:0044335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomyxoma","secondary_identifiers":["ICDO:8841/1","SCTID:404083008","EFO:1000087","ICD9:215.9","ICDO:8841/0","MEDGEN:1790210","UMLS:C5551004"],"termid":"MONDO:0006086","xrefs":{"Monarch":{"xref_id":"0006086"}}}


id: FYPO:0006170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to copper ion starvation is lower than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah","PMID:24569997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to copper ion starvation","termid":"FYPO:0006209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion starvation during meiotic cell cycle","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion starvation during meiotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper starvation during meiotic cell cycle","type":"exact"},{"name":"decreased RNA level during meiotic cell cycle during copper starvation","type":"related"},{"name":"decreased transcript level during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006170"}


id: PBO:0051369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-15","termid":"PBO:0051369"}


id: PBO:0071094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 96","termid":"PBO:0071094"}


id: GO:0008013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a catenin beta subunit.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"beta-catenin binding","termid":"GO:0008013"}


id: PBO:0111805
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase kinase 3 (GSK-3) subfamily","termid":"PBO:0111805"}


id: PBO:0088409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorelay sensor kinase Mak1","termid":"PBO:0088409"}


id: MONDO:0002045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal accumulation of cerebrospinal fluid within the ventricles of the brain that occurs as a consequence of impaired cerebrospinal fluid reabsorption by the arachnoid granulations.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus","termid":"MONDO:0001150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"communicating hydrocephalus","secondary_identifiers":["DOID:1573","MEDGEN:1058","NCIT:C34501","ICD9:331.3","UMLS:C0009451","SCTID:271569006","icd11.foundation:186577228","ICD10CM:G91.0"],"synonyms":[{"name":"non-obstructive hydrocephalus","type":"exact"}],"termid":"MONDO:0002045","xrefs":{"Monarch":{"xref_id":"0002045"}}}


id: PBO:0050921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3 pseudogene 4","termid":"PBO:0050921"}


id: PBO:0057344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 532","termid":"PBO:0057344"}


id: internal:broad
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"broad","termid":"internal:broad"}


id: MOD:01646
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine removal","termid":"MOD:01646"}


id: GO:0019783
data:
  {"annotated_genes":["SJAG_04497","SJAG_02774","SJAG_00764","SJAG_01281","SJAG_00125","SJAG_00573","SJAG_03752","SJAG_00546","SJAG_03429","SJAG_01312","SJAG_16454","SJAG_04215","SJAG_02244","SJAG_00742","SJAG_00644","SJAG_00776","SJAG_02419","SJAG_01481","SJAG_05977","SJAG_00966","SJAG_00662","SJAG_03147","SJAG_02214","SJAG_01768","SJAG_00795","SJAG_00720","SJAG_04538","SJAG_04651","SJAG_03686","SJAG_01528","SJAG_00087","SJAG_02900","SJAG_02341"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64147,72908,80703,75483,66167,73046,70432,74109,67397,62876,74529,76765,76862,77768,78419,93754,72315,77431,114613,76721,69605,74117,98340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004843"},{"annotations":[71432,95635,79321,110645,76647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019784"},{"annotations":[70358,90609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016929"},{"annotations":[111009,71703,100426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0101005"},{"annotations":[112011,75032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990380"},{"annotations":[79512,96871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061578"},{"annotations":[113930,115473,115545,112072,106126,110646,95636,105957,94478,68589,74603,104936,116257,88835,115118,96872,100194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140492"},{"annotations":[75242,106455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070139"}]},"cv_name":"molecular_function","definition":"An isopeptidase activity that cleaves ubiquitin or ubiquitin-like proteins (ULP; e.g. ATG8, ISG15, NEDD8, SUMO) from target proteins.","definition_xrefs":["PMID:19489724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00125":null,"SJAG_00546":null,"SJAG_00573":null,"SJAG_00644":null,"SJAG_00662":null,"SJAG_00720":null,"SJAG_00742":null,"SJAG_00764":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_00966":null,"SJAG_01281":null,"SJAG_01312":null,"SJAG_01481":null,"SJAG_01528":null,"SJAG_01768":null,"SJAG_02214":null,"SJAG_02244":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_02774":null,"SJAG_02900":null,"SJAG_03147":null,"SJAG_03429":null,"SJAG_03686":null,"SJAG_03752":null,"SJAG_04215":null,"SJAG_04497":null,"SJAG_04538":null,"SJAG_04651":null,"SJAG_05977":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0140096","GO:0003674","GO:0003824","GO:0008233"],"is_obsolete":false,"name":"ubiquitin-like protein peptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0070138","GO:0140491","GO:1904455","GO:1904454"],"synonyms":[{"name":"small conjugating protein-specific isopeptidase activity","type":"exact"},{"name":"small conjugating protein-specific protease activity","type":"exact"},{"name":"ubiquitin-like hydrolase activity","type":"exact"},{"name":"ubiquitin-like protein-specific isopeptidase activity","type":"exact"},{"name":"ubiquitin-like protein-specific protease activity","type":"exact"},{"name":"ubiquitin-like specific protease activity","type":"narrow"},{"name":"ubiquitin-like-protein-specific protease activity","type":"narrow"},{"name":"ubiquitin-specific protease activity involved in negative regulation of ERAD pathway","type":"narrow"},{"name":"ubiquitin-specific protease activity involved in positive regulation of ERAD pathway","type":"narrow"},{"name":"ubiquitinyl-like hydrolase activity","type":"exact"}],"termid":"GO:0019783","terms_by_termid":{"GO:0004843":null,"GO:0016929":null,"GO:0019784":null,"GO:0061578":null,"GO:0070139":null,"GO:0101005":null,"GO:0140492":null,"GO:1990380":null}}


id: MONDO:0850340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A high grade ependymoma that is located within the supratentorial brain.","definition_xrefs":["DOID:0080890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaplastic ependymoma","termid":"MONDO:0016700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"supratentorial ependymoma","secondary_identifiers":["NCIT:C186343","MEDGEN:1811811","UMLS:C5670470"],"termid":"MONDO:0850340","xrefs":{"Monarch":{"xref_id":"0850340"}}}


id: PBO:0091003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4451 family conserved fungal protein","termid":"PBO:0091003"}


id: FYPO:0003133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in the cell wall is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide absent from cell","termid":"FYPO:0001209"},{"relation_name":"is_a","term_name":"decreased cell wall galactomannan level","termid":"FYPO:0002265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002946","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"galactomannan absent from cell wall","synonyms":[{"name":"galactomannan absent from cell surface","type":"related"},{"name":"galactomannan absent from cell wall during mitotic cell cycle","type":"related"},{"name":"galactomannan absent from cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0003133"}


id: GO:0099642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins along microtubules from the cell periphery toward the cell body in nerve cell axons.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde axonal transport","termid":"GO:0008090"},{"relation_name":"is_a","term_name":"axo-dendritic protein transport","termid":"GO:0099640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"retrograde axonal protein transport","synonyms":[{"name":"retrograde axon cargo transport","type":"broad"}],"termid":"GO:0099642"}


id: GO:0035228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of the enzyme glutamate-cysteine ligase.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of glutamate-cysteine ligase activity (obsolete GO:0035228)","synonyms":[{"name":"down regulation of glutamate-cysteine ligase activity","type":"exact"},{"name":"down-regulation of glutamate-cysteine ligase activity","type":"exact"},{"name":"downregulation of glutamate-cysteine ligase activity","type":"exact"},{"name":"inhibition of glutamate-cysteine ligase activity","type":"narrow"}],"termid":"GO:0035228"}


id: GO:0050999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of the enzyme nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nitric-oxide synthase activity","synonyms":[{"name":"NOS regulator","type":"exact"},{"name":"nitric-oxide synthase regulator","type":"exact"},{"name":"regulation of NOS activity","type":"exact"}],"termid":"GO:0050999"}


id: GO:0003380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating ameboid cell taking part in gastrulation.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity involved in ameboidal cell migration","termid":"GO:0003371"},{"relation_name":"part_of","term_name":"establishment of cell polarity involved in gastrulation cell migration","termid":"GO:0003379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment or maintenance of cytoskeleton polarity involved in gastrulation","termid":"GO:0003380"}


id: GO:0070673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-18 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-18","synonyms":[{"name":"response to IL-18","type":"exact"}],"termid":"GO:0070673"}


id: PBO:0003366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGT1-like protein Git7","termid":"PBO:0003366"}


id: PBO:0065734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX domain containing 1","termid":"PBO:0065734"}


id: GO:1905466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of G-quadruplex DNA unwinding.","definition_xrefs":["PMID:26503245","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-quadruplex DNA unwinding (obsolete GO:1905466)","synonyms":[{"name":"down regulation of G-quadruplex DNA unwinding","type":"exact"},{"name":"down-regulation of G-quadruplex DNA unwinding","type":"exact"},{"name":"downregulation of G-quadruplex DNA unwinding","type":"exact"},{"name":"inhibition of G-quadruplex DNA unwinding","type":"narrow"}],"termid":"GO:1905466"}


id: PBO:0072978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2B member 2","termid":"PBO:0072978"}


id: MONDO:0700175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neoplasm that occurs in a cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cat disease","termid":"MONDO:0024912"},{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline neoplasm","termid":"MONDO:0700175","xrefs":{"Monarch":{"xref_id":"0700175"}}}


id: MONDO:0002903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by the failure to use developmentally expected speech sounds that are appropriate for the individual's age (i.e., the individual makes errors in sound production or use or omits sounds such as final consonants).","definition_xrefs":["NCIT:C92564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"speech disorder","termid":"MONDO:0004730"},{"relation_name":"is_a","term_name":"language disorder","termid":"MONDO:0004750"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"articulation disorder","secondary_identifiers":["MEDGEN:2081","ICD9:315.39","MESH:D001184","DOID:4186","SCTID:386701004","UMLS:C0003910"],"synonyms":[{"name":"articulation impairment","type":"exact"},{"name":"phonological disorder","type":"exact"}],"termid":"MONDO:0002903","xrefs":{"Monarch":{"xref_id":"0002903"}}}


id: PBO:0004913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 8, hinge protein (predicted)","termid":"PBO:0004913"}


id: GO:0019013
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The complete protein-nucleic acid complex that is the packaged form of the genome in a virus particle.","definition_xrefs":["ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral nucleocapsid","secondary_identifiers":["GO:0019014"],"synonyms":[{"name":"core","type":"broad"},{"name":"nucleocapsid","type":"exact"}],"termid":"GO:0019013"}


id: PBO:0039310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 4, lysine demethylase","termid":"PBO:0039310"}


id: GO:1900450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutamate receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of glutamate receptor signaling pathway","termid":"GO:1900449"},{"relation_name":"negatively_regulates","term_name":"glutamate receptor signaling pathway","termid":"GO:0007215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of glutamate receptor signaling pathway","synonyms":[{"name":"down regulation of glutamate receptor signaling pathway","type":"exact"},{"name":"down regulation of glutamate signaling pathway","type":"exact"},{"name":"down regulation of glutamate signalling pathway","type":"exact"},{"name":"down-regulation of glutamate receptor signaling pathway","type":"exact"},{"name":"down-regulation of glutamate signaling pathway","type":"exact"},{"name":"down-regulation of glutamate signalling pathway","type":"exact"},{"name":"downregulation of glutamate receptor signaling pathway","type":"exact"},{"name":"downregulation of glutamate signaling pathway","type":"exact"},{"name":"downregulation of glutamate signalling pathway","type":"exact"},{"name":"inhibition of glutamate receptor signaling pathway","type":"narrow"},{"name":"inhibition of glutamate signaling pathway","type":"exact"},{"name":"inhibition of glutamate signalling pathway","type":"exact"},{"name":"negative regulation of glutamate signaling pathway","type":"exact"},{"name":"negative regulation of glutamate signalling pathway","type":"exact"}],"termid":"GO:1900450"}


id: SO:0000639
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding regions of DNA sequence that separate genes coding for the 28S, 5.8S, and 18S ribosomal RNAs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcribed_spacer_region","termid":"SO:0000638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_transcribed_spacer_region","synonyms":[{"name":"internal transcribed spacer region","type":"exact"}],"termid":"SO:0000639"}


id: FYECO:0000341
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which dithiothreitol (DTT) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ DTT","synonyms":[{"name":"+ dithiothreitol","type":"exact"}],"termid":"FYECO:0000341"}


id: GO:0039714
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A viral factory located in the cytoplasm of a host cell.","definition_xrefs":["VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"is_a","term_name":"viral factory","termid":"GO:0039713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cytoplasmic viral factory","termid":"GO:0039714"}


id: MONDO:1012227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive retinal atrophy, non-human animal","termid":"MONDO:1011977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, domestic cat","secondary_identifiers":["OMIA:000830-9685"],"termid":"MONDO:1012227","xrefs":{"Monarch":{"xref_id":"1012227"}}}


id: GO:0097265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-HETE + NADP+ = 5-oxo-ETE + NADPH + H+.","definition_xrefs":["GOC:mw","PMID:1326548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"5(S)-hydroxyeicosatetraenoic acid dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-2161776"],"synonyms":[{"name":"5(S)-HETE dehydrogenase activity","type":"exact"},{"name":"5-HETE dehydrogenase activity","type":"exact"},{"name":"5-hydroxy-eicosatetraenoic acid dehydrogenase activity","type":"exact"}],"termid":"GO:0097265"}


id: PBO:0064447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podocan","termid":"PBO:0064447"}


id: PBO:0038493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 4","termid":"PBO:0038493"}


id: PBO:0084336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinetochore-associated protein; required for chromosome segregation and kinetochore clustering; required for normal segregation of chromosomes in meiosis and mitosis; component of the FEAR regulatory network, which promotes Cdc14p release from the nucleolus during anaphase; potential Cdc28p substrate","termid":"PBO:0084336"}


id: GO:2001059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a D-tagatose 6-phosphate.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"D-tagatose 6-phosphate metabolic process","termid":"GO:2001058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-tagatose 6-phosphate catabolic process","secondary_identifiers":["UniPathway:UPA00704"],"synonyms":[{"name":"D-tagatose 6-phosphate catabolism","type":"exact"}],"termid":"GO:2001059"}


id: PBO:0064369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase 2 pseudogene 1","termid":"PBO:0064369"}


id: PBO:0077555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 262","termid":"PBO:0077555"}


id: PBO:0109638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1C, member RAS oncogene family (pseudogene)","termid":"PBO:0109638"}


id: MONDO:0015182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital enteropathy involving intestinal mucosa development (obsolete MONDO:0015182)","secondary_identifiers":["Orphanet:104007"],"termid":"MONDO:0015182","xrefs":{"Monarch":{"xref_id":"0015182"}}}


id: GO:0018057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of the terminal amino-methylene groups of peptidyl-L-lysine or peptidyl-5-hydroxy-L-lysine to aldehyde groups to form allysine or hydroxyallysine residues, respectively; these are intermediates in the formation of covalent cross-links between adjacent polypeptide chains in proteins such as collagens.","definition_xrefs":["RESID:AA0121","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein oxidation","termid":"GO:0018158"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine oxidation","termid":"GO:0018057"}


id: PATO:0001008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001008 absolute latency value (obsolete PATO:0001008)","termid":"PATO:0001008"}


id: GO:0110046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A signal transduction process that contributes to cell cycle switching, mitotic to meiotic cell cycle.","definition_xrefs":["GOC:al","PMID:17674143"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transduction involved in cell cycle switching, mitotic to meiotic cell cycle (obsolete GO:0110046)","termid":"GO:0110046"}


id: GO:0043958
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propanoyl-CoA + NAD+ = acryloyl-CoA + H+ + NADH.","definition_xrefs":["GOC:jl","PMID:12603323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"acryloyl-CoA reductase (NADH) activity","secondary_identifiers":["MetaCyc:RXN-8568","EC:1.3.1.95","RHEA:34471"],"synonyms":[{"name":"acryloyl-CoA reductase activity","type":"broad"},{"name":"acryloyl-coenzyme A reductase activity","type":"broad"},{"name":"acrylyl-CoA reductase (NADH)","type":"exact"},{"name":"propionyl-CoA dehydrogenase","type":"broad"}],"termid":"GO:0043958"}


id: PBO:0075896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST7 antisense RNA 2","termid":"PBO:0075896"}


id: PATO:0001451
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An extended swelling in plant organs caused primarily by an excessive accumulation of water.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001451 edematous (sensu botany) (obsolete PATO:0001451)","synonyms":[{"name":"edemic","type":"exact"},{"name":"oedematous","type":"exact"},{"name":"oedemic","type":"exact"}],"termid":"PATO:0001451"}


id: MONDO:1010083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scott Syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scott Syndrome, non-human animal","secondary_identifiers":["OMIA:001353"],"termid":"MONDO:1010083","xrefs":{"Monarch":{"xref_id":"1010083"}}}


id: GO:0141218
data:
  {"annotated_genes":["SJAG_01075","SJAG_04186","SJAG_04039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104508,90397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[104509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141222"},{"annotations":[90398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[104510,114728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[77691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N6-acyl-L-lysyl-[protein] + NAD+ + H2O = 2''-O-acyl-ADP-D-ribose + nicotinamide + L-lysyl-[protein].","definition_xrefs":["RHEA:54172","PMID:35044827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"deacylase activity","termid":"GO:0160215"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"NAD-dependent protein lysine deacylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein lysine deacylase activity","type":"broad"}],"termid":"GO:0141218","terms_by_termid":{"GO:0032041":null,"GO:0046969":null,"GO:0046970":null,"GO:0140765":null,"GO:0141222":null}}


id: PATO:0001014
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001014 absolute occurence (obsolete PATO:0001014)","termid":"PATO:0001014"}


id: GO:0072313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric glomerular epithelial cell over time, from its formation to the mature structure. Metanephric glomerular epithelial cells are specialized epithelial cells that form part of the metanephric glomerulus; there are two types, metanephric glomerular parietal epithelial cells and metanephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell development","termid":"GO:0072310"},{"relation_name":"part_of","term_name":"metanephric glomerular epithelial cell differentiation","termid":"GO:0072312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular epithelial cell development","termid":"GO:0072313"}


id: PBO:0058714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6842","termid":"PBO:0058714"}


id: PBO:0088506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger, RING-type, Rad16-like","termid":"PBO:0088506"}


id: SO:0001715
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An ISRE is a transcriptional cis regulatory region, containing the consensus region: YAGTTTC(A/T)YTTTYCC, responsible for increased transcription via interferon binding.","direct_ancestors":[{"relation_name":"is_a","term_name":"TF_binding_site","termid":"SO:0000235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISRE","synonyms":[{"name":"interferon stimulated response element","type":"exact"}],"termid":"SO:0001715"}


id: PBO:0002520
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.3.1","termid":"PBO:0002520"}


id: PBO:0043154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 22","termid":"PBO:0043154"}


id: MONDO:0003562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the rete testis. Representative examples include adenoma and adenocarcinoma.","definition_xrefs":["NCIT:C39955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rete testis neoplasm","secondary_identifiers":["MEDGEN:308162","UMLS:C1514912","DOID:5639"],"synonyms":[{"name":"neoplasm of rete testis","type":"exact"},{"name":"rete testis neoplasm","type":"exact"},{"name":"rete testis neoplasm (disease)","type":"exact"},{"name":"rete testis tumor","type":"exact"},{"name":"rete testis tumour","type":"exact"},{"name":"tumor of rete testis","type":"exact"},{"name":"tumour of rete testis","type":"exact"}],"termid":"MONDO:0003562","xrefs":{"Monarch":{"xref_id":"0003562"}}}


id: FYPO:0000176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initiation of DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"abnormal DNA replication initiation","synonyms":[{"name":"abnormal DNA-dependent DNA replication initiation","type":"exact"}],"termid":"FYPO:0000176"}


id: FYPO:0004623
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which astral microtubule anchoring at the mitotic spindle pole body does not occur.","definition_xrefs":["PMID:15004232","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abolished astral microtubule anchoring at mitotic spindle pole body","synonyms":[{"name":"abolished astral microtubule anchoring at mitotic SPB","type":"exact"},{"name":"abolished astral microtubule anchoring at mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"abolished astral microtubule anchoring at mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"astral microtubule anchoring at mitotic spindle pole body abolished","type":"exact"}],"termid":"FYPO:0004623"}


id: MONDO:0800311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital bilateral absence of vas deferens","termid":"MONDO:0018801"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vas deferens, congenital unilateral aplasia of","secondary_identifiers":["MEDGEN:1712847","UMLS:C5393224"],"synonyms":[{"name":"CUAVD","type":"exact"}],"termid":"MONDO:0800311","xrefs":{"Monarch":{"xref_id":"0800311"}}}


id: PBO:0060165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 13 (pseudogene)","termid":"PBO:0060165"}


id: PBO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S6","termid":"PBO:0000187"}


id: PBO:0035760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_assembly_checkpoint","termid":"PBO:0035760"}


id: MONDO:1010585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in American black bear.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, American black bear","secondary_identifiers":["OMIA:000424-9643"],"termid":"MONDO:1010585","xrefs":{"Monarch":{"xref_id":"1010585"}}}


id: GO:0007276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation and maintenance of gametes in a multicellular organism. A gamete is a haploid reproductive cell.","definition_xrefs":["GOC:ems","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"sexual reproduction","termid":"GO:0019953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamete generation","secondary_identifiers":["GO:0009552"],"synonyms":[{"name":"gametogenesis","type":"related"}],"termid":"GO:0007276"}


id: PBO:0052266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4A","termid":"PBO:0052266"}


id: GO:0062131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gluconapin + a reduced electron acceptor + O2 = xi-progoitrin + an oxidized electron acceptor + H2O.","definition_xrefs":["PMID:18945935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-butenylglucosinolate 2-hydroxylase activity","secondary_identifiers":["RHEA:60628","MetaCyc:RXNQT-4343"],"synonyms":[{"name":"But-3-enyl Glucosinolate-2-hydroxylase activity","type":"exact"}],"termid":"GO:0062131"}


id: MONDO:1011508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gaucher disease that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Gaucher disease, non-human animal","termid":"MONDO:1011431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gaucher disease, pig","secondary_identifiers":["OMIA:000405-9823"],"termid":"MONDO:1011508","xrefs":{"Monarch":{"xref_id":"1011508"}}}


id: GO:0005623
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cell (obsolete GO:0005623)","secondary_identifiers":["Wikipedia:Cell_(biology)","NIF_Subcellular:sao1813327414"],"termid":"GO:0005623"}


id: MONDO:0019522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recessive dystrophic epidermolysis bullosa (RDEB)-generalized other, also known as RDEB non-Hallopeau-Siemens type, is a subtype of DEB characterized by generalized cutaneous and mucosal blistering that is not associated with severe deformities.","definition_xrefs":["Orphanet:89842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"recessive dystrophic epidermolysis bullosa-generalized other","secondary_identifiers":["GARD:12794","UMLS:C4511044","MEDGEN:1392226"],"synonyms":[{"name":"RDEB generalisata mitis","type":"exact"},{"name":"RDEB, generalised intermediate","type":"exact"},{"name":"RDEB, generalized intermediate","type":"exact"},{"name":"RDEB, non-Hallopeau-Siemens type","type":"exact"},{"name":"RDEB-O","type":"exact"},{"name":"RDEB-generalized other","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa generalisata mitis","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa, generalised other","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa, generalized other","type":"exact"},{"name":"generalised mitis RDEB","type":"exact"},{"name":"generalized mitis RDEB","type":"exact"},{"name":"recessive dystrophic epidermolysis bullosa, generalised intermediate","type":"related"},{"name":"recessive dystrophic epidermolysis bullosa, generalized intermediate","type":"related"},{"name":"recessive dystrophic epidermolysis bullosa, non-Hallopeau-Siemens type","type":"exact"}],"termid":"MONDO:0019522","xrefs":{"Monarch":{"xref_id":"0019522"}}}


id: PBO:0072274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 3","termid":"PBO:0072274"}


id: PATO:0001873
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's exhibiting a consistently-sized round cross section.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"has_cross_section","term_name":"circular","termid":"PATO:0000411"},{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cylindrical","secondary_identifiers":["PATO:0001203"],"synonyms":[{"name":"rod-like","type":"exact"},{"name":"rod-shaped","type":"exact"},{"name":"tubulate","type":"exact"}],"termid":"PATO:0001873"}


id: PBO:0005789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polynucleotide kinase Grc3 (predicted)","termid":"PBO:0005789"}


id: PBO:0051132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2-70D","termid":"PBO:0051132"}


id: MONDO:0008845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atonic-astatic syndrome of Foerster","secondary_identifiers":["OMIM:209100","MESH:C565926","MEDGEN:395300","UMLS:C1859594"],"synonyms":[{"name":"atonic-astatic syndrome of Foerster","type":"exact"}],"termid":"MONDO:0008845","xrefs":{"Monarch":{"xref_id":"0008845"}}}


id: PBO:0062451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 121 pseudogene","termid":"PBO:0062451"}


id: PBO:0060310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain kinase","termid":"PBO:0060310"}


id: PBO:0044497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYFIP related Rac1 interactor A","termid":"PBO:0044497"}


id: PBO:0004835
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.6","termid":"PBO:0004835"}


id: GO:1903339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell wall organization or biogenesis.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"negatively_regulates","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"negative regulation of cell wall organization or biogenesis","synonyms":[{"name":"down regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"down regulation of cell wall organization or biogenesis","type":"exact"},{"name":"down regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"down regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"down regulation of cellular cell wall organization or biogenesis","type":"exact"},{"name":"down-regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"down-regulation of cell wall organization or biogenesis","type":"exact"},{"name":"down-regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"down-regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"down-regulation of cellular cell wall organization or biogenesis","type":"exact"},{"name":"downregulation of cell wall organisation or biogenesis","type":"exact"},{"name":"downregulation of cell wall organization or biogenesis","type":"exact"},{"name":"downregulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"downregulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"downregulation of cellular cell wall organization or biogenesis","type":"exact"},{"name":"inhibition of cell wall organisation or biogenesis","type":"narrow"},{"name":"inhibition of cell wall organization or biogenesis","type":"narrow"},{"name":"inhibition of cell wall organization or biogenesis at cellular level","type":"narrow"},{"name":"inhibition of cellular cell wall organisation or biogenesis","type":"narrow"},{"name":"inhibition of cellular cell wall organization or biogenesis","type":"narrow"},{"name":"negative regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"negative regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"negative regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"negative regulation of cellular cell wall organization or biogenesis","type":"exact"}],"termid":"GO:1903339"}


id: GO:0006276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of the integrity of extrachromosomal plasmid DNA; includes processes that ensure plasmids are retained in the daughter cells after cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmid maintenance","termid":"GO:0006276"}


id: PBO:0031632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spore_germination","termid":"PBO:0031632"}


id: MONDO:0008846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital atransferrinemia is a very rare hematologic disease caused by a transferrin (TF) deficiency and characterized by microcytic, hypochromic anemia (manifesting with pallor, fatigue and growth retardation) and iron overload, and that can be fatal if left untreated.","definition_xrefs":["Orphanet:1195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn metal metabolism disorder","termid":"MONDO:0004689"},{"relation_name":"is_a","term_name":"hereditary anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"disorder of iron metabolism and transport","termid":"MONDO:0017763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005066","MONDO:0005570"],"is_obsolete":false,"name":"atransferrinemia","secondary_identifiers":["NANDO:2100180","SCTID:111571009","NANDO:2200617","OMIM:209300","GARD:9595","MEDGEN:105489","NCIT:C125693","MESH:C538259","NORD:819","UMLS:C0521802","DOID:0050649"],"synonyms":[{"name":"atransferrinemia","type":"exact"},{"name":"congenital atransferrinemia","type":"exact"},{"name":"congenital hypotransferrinemia","type":"exact"},{"name":"familial hypotransferrinemia","type":"exact"},{"name":"hereditary atransferrinemia","type":"exact"},{"name":"hypotransferrinemia, familial","type":"related"},{"name":"transferrin serum level quantitative trait locus 1","type":"related"}],"termid":"MONDO:0008846","xrefs":{"Monarch":{"xref_id":"0008846"}}}


id: MOD:00617
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 3x(2)H labeled residue methyl ester.","definition_xrefs":["OMSSA:21","Unimod:298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3x(2)H residue methyl ester","synonyms":[{"name":"Methyl:2H(3)","type":"related"},{"name":"ctermpeptrideuteromethyl","type":"exact"},{"name":"deuterated methyl ester","type":"related"}],"termid":"MOD:00617"}


id: PBO:0075804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 3, pseudogene","termid":"PBO:0075804"}


id: PBO:0113046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin segregase involved in DNA replication; ATPase activity, stimulated by S phase CDK-dependent phosphorylation, is coupled to nucleosome disassembly, promoting DNA replication; regulates cell-cycle-dependent histone gene expression; contains AAA+-ATPase domains and a non-canonical bromodomain; hexameric; relocalizes to the cytosol in response to hypoxia; human ortholog ATAD2 is a coregulator of oncogenic transcription factors and an oncogene overexpressed in cancers with poor prognosis","termid":"PBO:0113046"}


id: GO:0010098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the suspensor over time, from its formation to the mature structure. The suspensor is the extension at the base of the embryo that anchors the embryo in the embryo sac and pushes it into the endosperm.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suspensor development","termid":"GO:0010098"}


id: PBO:0062338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily D member 1 pseudogene","termid":"PBO:0062338"}


id: PBO:0064335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLSCR4 pseudogene 1","termid":"PBO:0064335"}


id: GO:0052582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pulegone + reduced [NADPH--hemoprotein reductase] + O2 = (R)-menthofuran + 2 H2O + +H+ + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:25658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(+)-menthofuran synthase activity","secondary_identifiers":["EC:1.14.14.143","KEGG_REACTION:R08923","MetaCyc:1.14.13.104-RXN"],"synonyms":[{"name":"(+)-MFS activity","type":"broad"},{"name":"(+)-pulegone 9-hydroxylase activity","type":"related"},{"name":"(+)-pulegone,NADPH:oxygen oxidoreductase (9-hydroxylating) activity","type":"related"},{"name":"cytochrome P450 menthofuran synthase activity","type":"related"},{"name":"menthofuran synthase activity","type":"related"}],"termid":"GO:0052582"}


id: PBO:0087305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex component and TPR protein; mediates 3'-5' RNA degradation by the cytoplasmic exosome; null mutants have superkiller phenotype of increased viral dsRNAs and are synthetic lethal with mutations in 5'-3' mRNA decay; mutations in the human ortholog, TTC37, causes Syndromic diarrhea/Trichohepatoenteric (SD/THE) syndrome","termid":"PBO:0087305"}


id: MONDO:0016572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central bilateral macrogyria is a neuronal migration disorder characterized by pseudobulbar palsy, developmental delay, mild mental retardation and epilepsy. It has been described in at least four children.","definition_xrefs":["Orphanet:2431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortical dysplasia","termid":"MONDO:0017094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central bilateral macrogyria","secondary_identifiers":["MEDGEN:929618","icd11.foundation:67804763","SCTID:720632004","UMLS:C4303949"],"termid":"MONDO:0016572","xrefs":{"Monarch":{"xref_id":"0016572"}}}


id: MONDO:0006840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dilatation of the lymphatic vessels.","definition_xrefs":["NCIT:C97087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"},{"relation_name":"is_a","term_name":"vascular ectasia","termid":"MONDO:0021658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphangiectasis","secondary_identifiers":["MEDGEN:9827","EFO:1001025","MESH:D008200","UMLS:C0024214"],"synonyms":[{"name":"lymphangiectasia","type":"related"}],"termid":"MONDO:0006840","xrefs":{"Monarch":{"xref_id":"0006840"}}}


id: PBO:0063763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhomeotic homolog 3","termid":"PBO:0063763"}


id: PBO:0077022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily member 4 pseudogene 1","termid":"PBO:0077022"}


id: GO:0047214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin-3-O-D-rhamnosyl-(1,6)-D-glucoside + UDP-D-glucose = cyanidin-3-O-[D-rhamnosyl-(1,6)-D-glucoside]-5-O-D-glucoside + UDP.","definition_xrefs":["MetaCyc:2.4.1.116-RXN","EC:2.4.1.116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"cyanidin-3-rhamnosylglucoside 5-O-glucosyltransferase activity","secondary_identifiers":["RHEA:12144"],"synonyms":[{"name":"UDP-glucose:cyanidin-3-O-D-rhamnosyl-1,6-D-glucoside 5-O-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:cyanidin-3-O-beta-L-rhamnosyl-(1->6)-beta-D-glucoside 5-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"cyanidin-3-O-rutinoside 5-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-cyanidin 3-rhamnosylglucoside 5-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047214"}


id: PBO:0113353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for pheromone-induced projection (shmoo) formation; regulates septin architecture during mating; has an RVXF motif that mediates targeting of Glc7p to mating projections; also detected in peroxisomes; interacts with Cdc12p; AFR1 has a paralog, YER158C, that arose from the whole genome duplication","termid":"PBO:0113353"}


id: PBO:0076259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SVIL antisense RNA 1","termid":"PBO:0076259"}


id: PBO:0005508
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.17.2","termid":"PBO:0005508"}


id: MONDO:0013607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"GATA2 deficiency with susceptibility to MDS/AML","termid":"MONDO:0042982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"monocytopenia with susceptibility to infections","secondary_identifiers":["DOID:0111947","icd11.foundation:1077753382","GARD:10934","MEDGEN:481660","Orphanet:228423","UMLS:C3280030","OMIM:614172"],"synonyms":[{"name":"DCML","type":"related"},{"name":"Dendritic cell, monocyte, B and NK lymphoid deficiency","type":"exact"},{"name":"Dendritic cell, monocyte, B lymphocyte, and natural Killer lymphocyte deficiency","type":"related"},{"name":"GATA2 deficiency","type":"related"},{"name":"IMD21","type":"related"},{"name":"MonoMAC","type":"exact"},{"name":"combined immunodeficiency with susceptibility to mycobacterial, viral and fungal infections","type":"exact"},{"name":"combined immunodeficiency with susceptibility to mycobacterial, viral, and fungal infections","type":"related"},{"name":"immunodeficiency 21","type":"related"},{"name":"immunodeficiency type 21","type":"exact"},{"name":"monocyte - B - natural killer - dendritic cell deficiency","type":"related"},{"name":"monocyte-B-natural killer-dendritic cell deficiency syndrome","type":"exact"},{"name":"monocytopenia and mycobacterial infection syndrome","type":"exact"},{"name":"monocytopenia with susceptibility to mycobacterial, fungal, and Papillomavirus infections and myelodysplasia","type":"related"}],"termid":"MONDO:0013607","xrefs":{"Monarch":{"xref_id":"0013607"}}}


id: GO:0016587
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains an Isw1 subunit from the ISWI-family of ATPases and acts to modify chromatin structure.","definition_xrefs":["PMID:15284901","GOC:mah","GOC:krc","PMID:15020051","PMID:16568949","PMID:21810179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"Isw1 complex","termid":"GO:0016587"}


id: GO:0009533
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Unstacked thylakoids that connect the grana stacks through the stroma.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid","termid":"GO:0009534"},{"relation_name":"part_of","term_name":"chloroplast stroma","termid":"GO:0009570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast stromal thylakoid","termid":"GO:0009533"}


id: PBO:0062630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 7 (gene/pseudogene)","termid":"PBO:0062630"}


id: PR:Q09868
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cip2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding post-transcriptional regulator cip2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.03","synonyms":[{"name":"Spom972h-cip2","type":"exact"},{"name":"csx1-interacting protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09868"}


id: PBO:0044800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 4A","termid":"PBO:0044800"}


id: FYECO:0000215
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition where the pH of the medium or assay buffer is lower than the standard pombe growth medium of pH of ~5.6.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low pH","termid":"FYECO:0000215"}


id: PBO:0064715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 51","termid":"PBO:0064715"}


id: GO:0033362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate; in this pathway tetrahydrodipicolinate is converted to meso-diaminopimelate in two enzymatic steps.","definition_xrefs":["GOC:pr","MetaCyc:PWY-5097","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process via diaminopimelate","termid":"GO:0009089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway","synonyms":[{"name":"lysine anabolism via diaminopimelate, diaminopimelate-aminotransferase pathway","type":"exact"},{"name":"lysine biosynthesis via diaminopimelate, diaminopimelate-aminotransferase pathway","type":"exact"},{"name":"lysine formation via diaminopimelate, diaminopimelate-aminotransferase pathway","type":"exact"},{"name":"lysine synthesis via diaminopimelate, diaminopimelate-aminotransferase pathway","type":"exact"}],"termid":"GO:0033362"}


id: GO:0061181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chondrocyte differentiation","termid":"GO:0032330"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"chondrocyte development","termid":"GO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chondrocyte development","termid":"GO:0061181"}


id: MONDO:0009994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rapidly growing malignant mesenchymal neoplasm. It is characterized by the presence of round cells with myoblastic differentiation and a fibrovascular stroma resembling an alveolar growth pattern. The tumor usually presents in the extremities.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"alveolar rhabdomyosarcoma","secondary_identifiers":["EFO:0000248","ONCOTREE:ARMS","ICD9:171.9","GARD:4701","MedDRA:10065867","HP:0006779","MESH:D018232","DOID:4051","icd11.foundation:1742058067","UMLS:C0206655","OMIM:268220","SCTID:404053004","Orphanet:99756","NCIT:C3749","ICDO:8920/3","MEDGEN:61651"],"synonyms":[{"name":"ARMS","type":"exact"},{"name":"RMS2","type":"related"},{"name":"alveolar childhood rhabdomyosarcoma","type":"exact"},{"name":"alveolar rhabdomyosarcoma","type":"exact"},{"name":"alveolar rhabdomyosarcoma (disease)","type":"exact"},{"name":"alveolar rhabdomyosarcoma (morphologic abnormality)","type":"exact"},{"name":"arms","type":"exact"},{"name":"monomorphous round cell rhabdomyosarcoma","type":"exact"},{"name":"paediatric alveolar rhabdomyosarcoma","type":"exact"},{"name":"pediatric alveolar rhabdomyosarcoma","type":"exact"},{"name":"rhabdomyosarcoma 2","type":"related"},{"name":"rhabdomyosarcoma 2, alveolar, somatic mutation","type":"exact"},{"name":"rhabdomyosarcoma alveolar","type":"related"},{"name":"rhabdomyosarcoma type 2","type":"exact"},{"name":"rhabdomyosarcoma, alveolar","type":"related"},{"name":"rhabdomyosarcoma, alveolar, somatic mutation","type":"exact"}],"termid":"MONDO:0009994","xrefs":{"Monarch":{"xref_id":"0009994"}}}


id: PBO:0086576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion causes sensitivity to unfolded protein response-inducing agents","termid":"PBO:0086576"}


id: PBO:0059323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 8","termid":"PBO:0059323"}


id: GO:0019463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glycine into other compounds, including creatine.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glycine catabolic process to creatine (obsolete GO:0019463)","synonyms":[{"name":"glycine breakdown to creatine","type":"exact"},{"name":"glycine degradation to creatine","type":"exact"}],"termid":"GO:0019463"}


id: PBO:0069091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 338, pseudogene","termid":"PBO:0069091"}


id: GO:0140633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a CARD8 inflammasome complex.","definition_xrefs":["PMID:33542150","PMID:33420028","PMID:33420033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex assembly","termid":"GO:0140632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"CARD8 inflammasome complex assembly","termid":"GO:0140633"}


id: MONDO:0005772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection due to the fungus Geotrichum.","definition_xrefs":["MESH:D005847"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geotrichosis","secondary_identifiers":["UMLS:C0017455","DOID:2832","ICD10CM:B48.3","ICD9:117.9","MEDGEN:42202","SCTID:13969006","icd11.foundation:1432903072"],"termid":"MONDO:0005772","xrefs":{"Monarch":{"xref_id":"0005772"}}}


id: PBO:0067983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 285","termid":"PBO:0067983"}


id: GO:0035288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Partitioning the insect head anlage into procephalic (labral, (ocular), antennal and intercalary) segments. The procephalic segments lie anterior to the gnathal (posterior head) segments, and are pattered by different segmentation gene cascades to the abdominal, thoracic and posterior head (gnathal) segments.","definition_xrefs":["PMID:15382136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head segmentation","termid":"GO:0035287"},{"relation_name":"part_of","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior head segmentation","synonyms":[{"name":"procephalic segmentation","type":"related"}],"termid":"GO:0035288"}


id: PBO:0080742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XPA binding protein 2","termid":"PBO:0080742"}


id: SO:0001727
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H3 histone protein is mono-methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K9_methylation_site","termid":"SO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K9_monomethylation_site","synonyms":[{"name":"H3K9 mono-methylation site","type":"exact"},{"name":"H3K9Me1","type":"related"}],"termid":"SO:0001727"}


id: MONDO:0859289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal dysmotility syndrome","secondary_identifiers":["UMLS:C5774219","MEDGEN:1823992","OMIM:620045"],"termid":"MONDO:0859289","xrefs":{"Monarch":{"xref_id":"0859289"}}}


id: GO:0090421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Initiation of a region of tissue in a plant embryo that is composed of one or more undifferentiated cells capable of undergoing mitosis and differentiation.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem initiation","termid":"GO:0010014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic meristem initiation","termid":"GO:0090421"}


id: PBO:0035978
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_trimethylation_during_vegetative_growth","termid":"PBO:0035978"}


id: PBO:0050779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1D","termid":"PBO:0050779"}


id: PBO:0069775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1059, pseudogene","termid":"PBO:0069775"}


id: PBO:0060388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid zinc finger 1","termid":"PBO:0060388"}


id: PBO:0058897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12115","termid":"PBO:0058897"}


id: PBO:0031186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_thiamine_diphosphokinase_activity","termid":"PBO:0031186"}


id: MONDO:0013065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ovarian failure in which the cause of the disease is a mutation in the NR5A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 7","secondary_identifiers":["UMLS:C2751825","OMIM:612964","MEDGEN:414115","DOID:0080864","MESH:C567838"],"synonyms":[{"name":"NR5A1 primary ovarian failure","type":"exact"},{"name":"Pof7","type":"related"},{"name":"adrenal insufficiency, Nr5A1-related","type":"related"},{"name":"adrenocortical insufficiency","type":"broad"},{"name":"premature ovarian failure 7","type":"exact"},{"name":"premature ovarian failure type 7","type":"exact"},{"name":"primary ovarian failure caused by mutation in NR5A1","type":"exact"}],"termid":"MONDO:0013065","xrefs":{"Monarch":{"xref_id":"0013065"}}}


id: PBO:0090878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Zip1","termid":"PBO:0090878"}


id: GO:0003156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of animal organ formation. Organ formation is the process pertaining to the initial formation of an organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment.","definition_xrefs":["GOC:tb","GOC:mtg_heart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"animal organ formation","termid":"GO:0048645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of animal organ formation","termid":"GO:0003156"}


id: FYPO:0006900
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"decreased septum thickness","synonyms":[{"name":"decreased septum thickness during mitotic cell cycle","type":"related"},{"name":"decreased septum thickness during vegetative growth","type":"exact"},{"name":"thin septum","type":"exact"}],"termid":"FYPO:0006900"}


id: GO:0030066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome b6 (obsolete GO:0030066)","synonyms":[{"name":"cytochrome b-563","type":"related"},{"name":"cytochrome b6","type":"exact"}],"termid":"GO:0030066"}


id: FYPO:0007719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which SMN complex assembly is abolished.","definition_xrefs":["PomBase:mah","PMID:33754639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal SMN complex assembly","termid":"FYPO:0007718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished SMN complex assembly","synonyms":[{"name":"SMN complex assembly abolished","type":"exact"},{"name":"abolished SMN complex assembly during mitotic cell cycle","type":"related"},{"name":"abolished SMN complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007719"}


id: GO:1905089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of type 2 mitophagy.","definition_xrefs":["PMID:26942284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitophagy","termid":"GO:1901524"},{"relation_name":"regulates","term_name":"type 2 mitophagy","termid":"GO:0061734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"regulation of type 2 mitophagy","synonyms":[{"name":"regulation of PRKN-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"regulation of Park2-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"}],"termid":"GO:1905089"}


id: GO:0046421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate = pyruvate + succinate.","definition_xrefs":["EC:4.1.3.30","RHEA:16809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"methylisocitrate lyase activity","secondary_identifiers":["KEGG_REACTION:R00409","MetaCyc:METHYLISOCITRATE-LYASE-RXN"],"synonyms":[{"name":"(2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate pyruvate-lyase (succinate-forming)","type":"related"},{"name":"(2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate pyruvate-lyase activity","type":"related"},{"name":"2-methylisocitrate lyase activity","type":"exact"},{"name":"MICL","type":"related"}],"termid":"GO:0046421"}


id: PBO:0002781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific cysteine protease, OTU family, Otu2","termid":"PBO:0002781"}


id: PBO:0080478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault RNA 2-1","termid":"PBO:0080478"}


id: PBO:0001331
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"essential function does not appear to reside in its role in the folding or retention of misfolded proteins","termid":"PBO:0001331"}


id: PBO:0052644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 12","termid":"PBO:0052644"}


id: MONDO:0023310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemiplegic migraine (obsolete MONDO:0023310)","termid":"MONDO:0023310","xrefs":{"Monarch":{"xref_id":"0023310"}}}


id: MONDO:0044964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucoepidermoid carcinoma arising from the minor salivary glands in the oral cavity. It is often asymptomatic and detected during a routine dental examination.","definition_xrefs":["NCIT:C8177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"oral cavity mucoepidermoid carcinoma","secondary_identifiers":["MEDGEN:83629","UMLS:C0280309"],"synonyms":[{"name":"mucoepidermoid carcinoma of oral cavity","type":"exact"},{"name":"mucoepidermoid carcinoma of the oral cavity","type":"exact"},{"name":"oral cavity mucoepidermoid cancer","type":"exact"},{"name":"oral cavity mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0044964","xrefs":{"Monarch":{"xref_id":"0044964"}}}


id: PBO:0061110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 2B","termid":"PBO:0061110"}


id: PBO:0083857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1F0 ATPase synthase peripheral stalk assembly factor; subunit of the matrix-exposed inner mitochondrial membrane localized INA complex (Ina22p-Ina17p) involved in assembly of the F1F0 peripheral stalk; co-purifies with Ina22p and ATP synthase subunits; null mutant displays elevated frequency of mitochondrial genome loss and has a respiratory growth defect","termid":"PBO:0083857"}


id: PBO:0114534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAC3/GANP/THP3 family protein, human LENG8 ortholog, implicated in transcription or RNA surveillance","termid":"PBO:0114534"}


id: MONDO:0009336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary hemosiderosis","termid":"MONDO:0008346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hemosiderosis, pulmonary, with deficiency of gamma-a globulin","secondary_identifiers":["OMIM:235500","GARD:15180"],"synonyms":[{"name":"hemosiderosis, pulmonary, with deficiency of gamma-a globulin","type":"exact"}],"termid":"MONDO:0009336","xrefs":{"Monarch":{"xref_id":"0009336"}}}


id: MONDO:0004411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gastrin-producing neuroendocrine tumor that arises from the duodenum. It is characterized by the presence of uniform cells that form pseudorosettes. The neoplastic cells have uniform nuclei and small amount of eosinophilic cytoplasm.","definition_xrefs":["NCIT:C5731"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"duodenum cancer","termid":"MONDO:0000920"},{"relation_name":"is_a","term_name":"gastrin-producing neuroendocrine tumor","termid":"MONDO:0003523"},{"relation_name":"is_a","term_name":"duodenal neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenal gastrin-producing neuroendocrine tumor","secondary_identifiers":["UMLS:C1333321","MEDGEN:272550","DOID:7959"],"synonyms":[{"name":"duodenal G-cell gastrin producing tumor","type":"exact"},{"name":"duodenal G-cell gastrin producing tumour","type":"exact"},{"name":"duodenal gastrin-producing NET","type":"exact"},{"name":"duodenal gastrin-producing neuroendocrine tumor","type":"exact"},{"name":"duodenal gastrinoma","type":"exact"},{"name":"duodenum gastrin-producing neuroendocrine tumor","type":"exact"},{"name":"duodenum gastrin-producing neuroendocrine tumour","type":"exact"},{"name":"gastrin producing tumor of duodenum","type":"exact"},{"name":"gastrin producing tumor of the duodenum","type":"exact"},{"name":"gastrin producing tumour of duodenum","type":"exact"},{"name":"gastrin producing tumour of the duodenum","type":"exact"},{"name":"gastrin-producing neuroendocrine tumor of duodenum","type":"exact"},{"name":"gastrin-producing neuroendocrine tumour of duodenum","type":"exact"},{"name":"gastrinoma of duodenum","type":"exact"},{"name":"gastrinoma of the duodenum","type":"exact"},{"name":"malignant duodenal gastrinoma","type":"exact"}],"termid":"MONDO:0004411","xrefs":{"Monarch":{"xref_id":"0004411"}}}


id: PBO:0085150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleoside monophosphate and nucleoside diphosphate kinase; functions in the de novo biosynthesis of pyrimidine deoxyribonucleotides; thymidylate/uridylate kinase that converts nucleoside monophosphates, dTMP and dUMP to nucleoside diphosphates, dTDP and dUDP; nucleoside diphosphate kinase that converts nucleoside diphosphates, dTDP and dUDP to dTTP and dUTP; essential for mitotic and meiotic DNA replication; homologous to S. pombe tmp1; human homolog DTYMK can complement the cdc8 null mutant","termid":"PBO:0085150"}


id: GO:0042150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of DNA recombination occurring within a plasmid or between plasmids and other plasmids or DNA molecules.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"plasmid recombination","termid":"GO:0042150"}


id: GO:0015574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of trehalose from one side of a membrane to the other. Trehalose is the disaccharide alpha-D-glucopyranosyl-alpha-D-glucopyranoside that acts of a reserve carbohydrate in certain fungi, algae and lichens.","definition_xrefs":["ISBN:0198506732","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"trehalose transmembrane transporter activity","secondary_identifiers":["GO:0015584"],"synonyms":[{"name":"trehalose permease activity","type":"exact"}],"termid":"GO:0015574"}


id: MONDO:0015264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptogenic organizing pneumonia (COP) is a form of idiopathic interstitial pneumonia characterized pathologically by organizing pneumonia (OP) that presents with non-specific flu-like symptoms, as well as cough and dyspnea and where no etiological agent is found.","definition_xrefs":["Orphanet:1302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic interstitial pneumonia","termid":"MONDO:0002429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptogenic organizing pneumonia","secondary_identifiers":["EFO:1001300","GARD:1620","MESH:D018549","DOID:0050157","ICD10CM:J84.116","NANDO:1200421","NORD:873","SCTID:68409003","NCIT:C62586","SCTID:719218000","UMLS:C0242770","MEDGEN:116663","ICD9:516.36","icd11.foundation:1937662238"],"synonyms":[{"name":"COP","type":"exact"},{"name":"Organizing Pneumonia","type":"exact"},{"name":"bronchiolitis obliterans organising pneumonia","type":"exact"},{"name":"bronchiolitis obliterans organizing pneumonia","type":"exact"},{"name":"constrictive bronchiolitis","type":"related"},{"name":"cryptogenic organising pneumonitis","type":"exact"},{"name":"cryptogenic organizing pneumonitis","type":"exact"},{"name":"idiopathic BOOP","type":"related"},{"name":"idiopathic bronchiolitis obliterans organising pneumonia","type":"related"},{"name":"idiopathic bronchiolitis obliterans organizing pneumonia","type":"related"},{"name":"idiopathic bronchiolitis obliterans with organising pneumonia","type":"exact"},{"name":"idiopathic bronchiolitis obliterans with organizing pneumonia","type":"exact"},{"name":"organising pneumonia","type":"exact"},{"name":"organizing pneumonia","type":"exact"}],"termid":"MONDO:0015264","xrefs":{"Monarch":{"xref_id":"0015264"}}}


id: PBO:0072534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 64","termid":"PBO:0072534"}


id: GO:0042201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-cyclopropylmelamine, a triazine compound commonly used as an insect growth regulator insecticide.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"s-triazine compound metabolic process","termid":"GO:0018965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-cyclopropylmelamine metabolic process","synonyms":[{"name":"N-cyclopropylmelamine metabolism","type":"exact"},{"name":"cyromazine metabolic process","type":"exact"},{"name":"cyromazine metabolism","type":"exact"}],"termid":"GO:0042201"}


id: PR:Q09811
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rqh1 gene.","definition_xrefs":["UniProtKB:Q09811","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase hus2/rqh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.12","synonyms":[{"name":"Spom972h-rqh1","type":"exact"}],"termid":"PR:Q09811"}


id: PBO:0113363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to the Rap1p C-terminus; inhibits MRX-dependent Tel1p activity by acting directly on Rad50p and discharging its activated ATP-bound state, thereby rendering the MRX complex incompetent for Tel1p activation; acts synergistically with Rif1p to help control telomere length, establish telomeric silencing; deletion results in telomere elongation; RIF2 has paralog ORC4 that arose from the whole genome duplication","termid":"PBO:0113363"}


id: PBO:0087021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 40S subunit protein S0A; required for maturation of 18S rRNA along with Rps0Bp; deletion of either RPS0 gene reduces growth rate, deletion of both genes is lethal; homologous to human ribosomal protein SA and bacterial S2; RPS0A has a paralog, RPS0B, that arose from the whole genome duplication;","termid":"PBO:0087021"}


id: GO:1901468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferulate catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of ferulate catabolic process","termid":"GO:1901466"},{"relation_name":"positively_regulates","term_name":"ferulate catabolic process","termid":"GO:1901067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of ferulate catabolic process","synonyms":[{"name":"activation of ferulate breakdown","type":"exact"},{"name":"activation of ferulate catabolic process","type":"narrow"},{"name":"activation of ferulate catabolism","type":"exact"},{"name":"activation of ferulate degradation","type":"exact"},{"name":"positive regulation of ferulate breakdown","type":"exact"},{"name":"positive regulation of ferulate catabolism","type":"exact"},{"name":"positive regulation of ferulate degradation","type":"exact"},{"name":"up regulation of ferulate breakdown","type":"exact"},{"name":"up regulation of ferulate catabolic process","type":"exact"},{"name":"up regulation of ferulate catabolism","type":"exact"},{"name":"up regulation of ferulate degradation","type":"exact"},{"name":"up-regulation of ferulate breakdown","type":"exact"},{"name":"up-regulation of ferulate catabolic process","type":"exact"},{"name":"up-regulation of ferulate catabolism","type":"exact"},{"name":"up-regulation of ferulate degradation","type":"exact"},{"name":"upregulation of ferulate breakdown","type":"exact"},{"name":"upregulation of ferulate catabolic process","type":"exact"},{"name":"upregulation of ferulate catabolism","type":"exact"},{"name":"upregulation of ferulate degradation","type":"exact"}],"termid":"GO:1901468"}


id: PR:Q10113
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mal3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule integrity protein mal3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.15","synonyms":[{"name":"Spom972h-mal3","type":"exact"}],"termid":"PR:Q10113"}


id: GO:0015451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Primary active transport of a solute across a membrane driven by decarboxylation of a cytoplasmic substrate. Primary active transport is catalysis of the transport of a solute across a membrane, up the solute's concentration gradient, by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction and is driven by a primary energy source.","definition_xrefs":["ISBN:0815340729","TC:3.B.-.-.-","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary active transmembrane transporter activity","termid":"GO:0015399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"decarboxylation-driven active transmembrane transporter activity","secondary_identifiers":["TC:3.B"],"synonyms":[{"name":"decarboxylation-driven transporter","type":"exact"}],"termid":"GO:0015451"}


id: PBO:0046136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A2","termid":"PBO:0046136"}


id: PR:O74828
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ESF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02698","PANTHER:PTHR12202:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein esf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.01c","secondary_identifiers":["UniProtKB:O74828"],"synonyms":[{"name":"Spom972h-ESF1","type":"exact"}],"termid":"PR:O74828"}


id: PBO:0072221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 4","termid":"PBO:0072221"}


id: PATO:0001985
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being kept below its freezing point.","definition_xrefs":["OBI:OBI"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature","termid":"PATO:0000146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frozen","termid":"PATO:0001985"}


id: PBO:0085681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in proteasomal and 40S ribosomal subunit biogenesis; required for cleavage of the 20S pre-rRNA to generate the mature 18S rRNA; cleavage is activated by Fun12p, a GTPase and translation initiation factor; relocalizes from nucleus to nucleolus upon DNA replication stress","termid":"PBO:0085681"}


id: GO:0000823
data:
  {"annotated_genes":["SJAG_03409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99126],"is_not":false,"summary":null,"term":"GO:0000823"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4,5-trisphosphate + ATP = 1D-myo-inositol 1,4,5,6-tetrakisphosphate + ADP + H+.","definition_xrefs":["RHEA:17717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 6-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R05800","MetaCyc:2.7.1.151-RXN"],"synonyms":[{"name":"IpmK","type":"broad"},{"name":"inositol polyphosphate multikinase activity","type":"broad"},{"name":"inositol trisphosphate 6-kinase activity","type":"broad"}],"termid":"GO:0000823","terms_by_termid":{"GO:0000823":null}}


id: MONDO:0001465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis","termid":"MONDO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"superficial keratitis","secondary_identifiers":["UMLS:C0155074","DOID:12196","SCTID:27019000","ICD9:370.20","MEDGEN:509771"],"termid":"MONDO:0001465","xrefs":{"Monarch":{"xref_id":"0001465"}}}


id: PBO:0086677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by gene-trapping, microarray analysis, and genome-wide homology searches; mRNA identified as translated by ribosome profiling data; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; partially overlaps the dubious ORF YBR126W-B","termid":"PBO:0086677"}


id: MONDO:0030936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, progressive myoclonic, 12","secondary_identifiers":["MEDGEN:1778162","UMLS:C5543069","OMIM:619191"],"synonyms":[{"name":"EPM12","type":"exact"},{"name":"epilepsy, progressive myoclonic, 12","type":"exact"}],"termid":"MONDO:0030936","xrefs":{"Monarch":{"xref_id":"0030936"}}}


id: PBO:0080647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 97","termid":"PBO:0080647"}


id: PBO:0069158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 410, pseudogene","termid":"PBO:0069158"}


id: GO:0016584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GOC:bf","PMID:11447119","PMID:8676389"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleosome positioning (obsolete GO:0016584)","synonyms":[{"name":"nucleosome spacing","type":"exact"}],"termid":"GO:0016584"}


id: PBO:0028980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_glutathione","termid":"PBO:0028980"}


id: PBO:0113492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor involved in sulfite metabolism; activates transcription of SSU1, DDI2, DDI3; overexpression suppresses sulfite-sensitivity of many unrelated mutants due to hyperactivation of SSU1, contains five zinc fingers; protein abundance increases in response to DNA replication stress","termid":"PBO:0113492"}


id: SO:0001291
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N4,2'-O-dimethylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N4_2_prime_O_dimethylcytidine","secondary_identifiers":["RNAMOD:083"],"synonyms":[{"name":"N4 2 prime O dimethylcytidine","type":"exact"},{"name":"N4,2'-O-dimethylcytidine","type":"exact"},{"name":"m4Cm","type":"exact"}],"termid":"SO:0001291"}


id: PBO:0066100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras related dexamethasone induced 1","termid":"PBO:0066100"}


id: MONDO:0018640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary vasculitis","secondary_identifiers":["Orphanet:445197","GARD:21863","UMLS:C5681200","MEDGEN:1842960"],"termid":"MONDO:0018640","xrefs":{"Monarch":{"xref_id":"0018640"}}}


id: GO:0004820
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73200],"is_not":false,"summary":null,"term":"GO:0004820"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).","definition_xrefs":["EC:6.1.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0003674","GO:0140101","GO:0016874"],"is_obsolete":false,"name":"glycine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLYCINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380048","Reactome:R-HSA-380240","RHEA:16013"],"synonyms":[{"name":"glycine:tRNAGly ligase (AMP-forming) activity","type":"related"},{"name":"glycyl translase activity","type":"related"},{"name":"glycyl-tRNA synthetase activity","type":"exact"},{"name":"glycyl-transfer RNA synthetase activity","type":"related"},{"name":"glycyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"glycyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004820","terms_by_termid":{"GO:0004820":null}}


id: FYPO:0007247
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic G2 DNA damage checkpoint does not occur during a cellular response to ionizing radiation. Normally, the mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah","GO:0007095","PMID:9042863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitotic G2 DNA damage checkpoint","termid":"FYPO:0004259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000298","FYPO:0001985"],"is_obsolete":false,"name":"abolished mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation","synonyms":[{"name":"abolished G2 DNA damage checkpoint during cellular response to ionizing radiation during mitotic cell cycle","type":"exact"},{"name":"abolished mitotic G2 DNA damage checkpoint activation during cellular response to ionizing radiation","type":"related"},{"name":"abolished mitotic G2 DNA damage checkpoint during cellular response to IR","type":"exact"},{"name":"abolished mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"abolished mitotic cell cycle G2/M transition DNA damage checkpoint during cellular response to ionizing radiation","type":"exact"},{"name":"mitotic G2 DNA damage checkpoint abolished during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0007247"}


id: PR:O74968
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- usp102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 small nuclear ribonucleoprotein usp102 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.07c","synonyms":[{"name":"Spom972h-usp102","type":"exact"},{"name":"U1 snRNP protein usp102 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74968"}


id: PBO:0060533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 9 (putative)","termid":"PBO:0060533"}


id: GO:0000747
data:
  {"annotated_genes":["SJAG_01370","SJAG_00667","SJAG_03486","SJAG_02444","SJAG_00600","SJAG_01311","SJAG_01894","SJAG_01254","SJAG_00993","SJAG_01345","SJAG_04723","SJAG_01017","SJAG_02737","SJAG_00781","SJAG_02426","SJAG_00990","SJAG_02878","SJAG_05000","SJAG_05016","SJAG_04155","SJAG_02432","SJAG_02923","SJAG_01113","SJAG_02924","SJAG_01754","SJAG_02222","SJAG_02486","SJAG_02045","SJAG_03802","SJAG_04026","SJAG_02286","SJAG_03048","SJAG_03346","SJAG_04009","SJAG_02233","SJAG_03501","SJAG_00117","SJAG_03735","SJAG_02472","SJAG_00256","SJAG_01943","SJAG_03453","SJAG_02773","SJAG_01613","SJAG_04982","SJAG_00975","SJAG_00145","SJAG_04398","SJAG_01993","SJAG_03974","SJAG_02989","SJAG_02351","SJAG_04887","SJAG_05153","SJAG_00526","SJAG_01718","SJAG_00810","SJAG_01888","SJAG_03646","SJAG_00664","SJAG_04813","SJAG_02380","SJAG_02651","SJAG_00140","SJAG_02864","SJAG_01171","SJAG_04394","SJAG_02921","SJAG_00472","SJAG_01084","SJAG_01509","SJAG_02718","SJAG_06638","SJAG_01699","SJAG_02602","SJAG_02785","SJAG_04206","SJAG_03340","SJAG_03209","SJAG_04312","SJAG_03623","SJAG_01919","SJAG_02730","SJAG_01978","SJAG_02379","SJAG_02700","SJAG_03444","SJAG_04936","SJAG_05001","SJAG_04682","SJAG_02592","SJAG_03309","SJAG_03081","SJAG_01401","SJAG_02266","SJAG_00210","SJAG_00870","SJAG_00113","SJAG_02066","SJAG_02723","SJAG_03067"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97960,105186,106423,107174,107498,112731,114928],"is_not":false,"summary":null,"term":"GO:0000747"},{"annotations":[92854,98048],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000755"},{"annotations":[94362,108377,102262,102261,100470,89436,88619,111624],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904541"},{"annotations":[98742],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031141"},{"annotations":[115888],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031142"},{"annotations":[116444,118530,89553,116782,106593,88370],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010514"},{"annotations":[78992,117245,91726,88100,91335,99544,111773],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000742"},{"annotations":[99222,98613,88600,92855,114626,99303],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[93560,101937,102678,89152,116863,96722,105232,92429],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031138"},{"annotations":[95493],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140538"},{"annotations":[107162,91749,94567,104814,109322,106133,106812,93269,100861,115835,116372,106966,88547,102164,114774,94707,106228],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010515"},{"annotations":[93669],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[97904,76700,88102,91727,99558],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000743"},{"annotations":[93525,88179],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0071432"},{"annotations":[92528,96712,97374,106596,93670,89575],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[71204],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0000750"},{"annotations":[110502,92695,78233,95627,96702],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032220"},{"annotations":[111681,98878,100446,102072,105234,107451,99768],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031139"},{"annotations":[88193,104758,116578,99825,107368,108886,100819,103678,119390,119391,109117,101705],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900237"},{"annotations":[118341],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031137"},{"annotations":[105843],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0000749"},{"annotations":[91193,106696,115891,111674],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032005"}]},"cv_name":"biological_process","definition":"A conjugation process that results in the union of cellular and genetic information from compatible mating types. 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id: PBO:0052335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA2012 antisense RNA 1","termid":"PBO:0052335"}


id: PBO:0005474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex regulatory subunit Naa15 (predicted)","termid":"PBO:0005474"}


id: MONDO:0004127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung adenocarcinoma detectable by sputum cytology only. The primary tumor is undetectable radiographically or during bronchoscopy; therefore, it can not be assessed.","definition_xrefs":["NCIT:C6699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung occult adenocarcinoma","secondary_identifiers":["MEDGEN:277443","DOID:7168","UMLS:C1335096"],"synonyms":[{"name":"occult adenocarcinoma of lung","type":"related"},{"name":"occult adenocarcinoma of the lung","type":"exact"},{"name":"occult lung adenocarcinoma","type":"related"}],"termid":"MONDO:0004127","xrefs":{"Monarch":{"xref_id":"0004127"}}}


id: PBO:0090376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr4 homolog 2 Tsr402","termid":"PBO:0090376"}


id: PBO:0065110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C epsilon","termid":"PBO:0065110"}


id: SO:0002350
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fragile site considered part of the normal chromosomal structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"fragile_site","termid":"SO:0002349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"common_fragile_site","termid":"SO:0002350"}


id: PBO:0066824
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 123","termid":"PBO:0066824"}


id: PATO:0001191
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the middle relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial to","termid":"PATO:0001191"}


id: PBO:0036531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic translation release factor class II eRF3","termid":"PBO:0036531"}


id: PR:Q9C0X1
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18E5.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C18E5.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.14c","synonyms":[{"name":"Spom972h-SPBC18E5.14c","type":"exact"}],"termid":"PR:Q9C0X1"}


id: GO:2000510
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of dendritic cell chemotaxis","termid":"GO:2000508"},{"relation_name":"positively_regulates","term_name":"dendritic cell chemotaxis","termid":"GO:0002407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic cell chemotaxis","termid":"GO:2000510"}


id: SO:0002009
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one base of a codon encoding selenocysteine is changed, resulting in a different encoded amino acid.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rare_amino_acid_variant","termid":"SO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenocysteine_loss","synonyms":[{"name":"selenocysteine loss","type":"exact"}],"termid":"SO:0002009"}


id: GO:1900626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arugosin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"arugosin biosynthetic process","termid":"GO:1900587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of arugosin biosynthetic process","synonyms":[{"name":"regulation of arugosin anabolism","type":"exact"},{"name":"regulation of arugosin biosynthesis","type":"exact"},{"name":"regulation of arugosin formation","type":"exact"},{"name":"regulation of arugosin synthesis","type":"exact"}],"termid":"GO:1900626"}


id: PBO:0082853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of the signal recognition particle (SRP); the SRP is a ribonucleoprotein (RNP) complex that functions in targeting nascent secretory proteins to the endoplasmic reticulum (ER) membrane","termid":"PBO:0082853"}


id: MONDO:1010948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-hodgkin lymphoma that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine lymphoma","termid":"MONDO:0700145"},{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, non-human animal","termid":"MONDO:1010214"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-hodgkin lymphoma, dog","secondary_identifiers":["OMIA:001708-9615"],"termid":"MONDO:1010948","xrefs":{"Monarch":{"xref_id":"1010948"}}}


id: PBO:0003694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm10/Mdm12/Mmm1 complex subunit Mdm12","termid":"PBO:0003694"}


id: GO:0140884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a type II interferon-mediated signaling in the host organism. Type II interferon is also known as interferon-gamma.","definition_xrefs":["PMID:28901902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host interferon-mediated signaling pathway","termid":"GO:0140886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host type II interferon-mediated signaling pathway","synonyms":[{"name":"negative regulation by virus of host type II interferon-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type II IFN-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type II interferon-mediated signaling pathway","type":"narrow"},{"name":"suppression by virus of host type II interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0140884"}


id: GO:0019634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphonates, any organic compounds containing one or more C-PO(OH)2 or C-PO(OR)2 (with R=alkyl, aryl) groups. Metabolism of phosphonic acid itself, an inorganic compound without the biochemically relevant C-P bond, is not included.","definition_xrefs":["ISBN:0721662544","GOC:js"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"organic phosphonate metabolic process","synonyms":[{"name":"organophosphonate metabolic process","type":"related"},{"name":"phosphonate metabolism","type":"exact"}],"termid":"GO:0019634"}


id: PBO:0066426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-glutamic acid dipeptide repeats pseudogene 1 Y-linked","termid":"PBO:0066426"}


id: PBO:0073905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 15 member 3","termid":"PBO:0073905"}


id: GO:0090365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["GOC:dph","PMID:14559896","GOC:sl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"regulates","term_name":"mRNA modification","termid":"GO:0016556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA modification","synonyms":[{"name":"regulation of mRNA editing","type":"narrow"}],"termid":"GO:0090365"}


id: PBO:0027897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_snRNA_level","termid":"PBO:0027897"}


id: MONDO:0005108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease caused by a virus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral infectious disease","secondary_identifiers":["DOID:934","ICD9:060-066.99","ICD9:079.99","NCIT:C3439","ICD9:066.9","EFO:0000763","ICD9:078.89","MESH:D014777","SCTID:34014006"],"synonyms":[{"name":"Viruses caused disease or disorder","type":"exact"},{"name":"Viruses disease or disorder","type":"exact"},{"name":"Viruses infection","type":"exact"},{"name":"Viruses infectious disease","type":"exact"},{"name":"infection, viral","type":"exact"},{"name":"infections, Viruses","type":"related"},{"name":"viral disease","type":"exact"},{"name":"viral disorder","type":"exact"},{"name":"viral infection","type":"exact"},{"name":"virus infection","type":"exact"}],"termid":"MONDO:0005108","xrefs":{"Monarch":{"xref_id":"0005108"}}}


id: PBO:0066355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 2","termid":"PBO:0066355"}


id: PBO:0042582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion associated, oncogene regulated","termid":"PBO:0042582"}


id: PBO:0028237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleus","termid":"PBO:0028237"}


id: GO:0043095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the activity of the enzyme GTP cyclohydrolase I.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of GTP cyclohydrolase I activity (obsolete GO:0043095)","termid":"GO:0043095"}


id: GO:0001930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of exocyst assembly.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocyst assembly","termid":"GO:0001928"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"positively_regulates","term_name":"exocyst assembly","termid":"GO:0001927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0140056"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0140056","GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of exocyst assembly","synonyms":[{"name":"activation of exocyst assembly","type":"narrow"},{"name":"stimulation of exocyst assembly","type":"narrow"},{"name":"up regulation of exocyst assembly","type":"exact"},{"name":"up-regulation of exocyst assembly","type":"exact"},{"name":"upregulation of exocyst assembly","type":"exact"}],"termid":"GO:0001930"}


id: PBO:0057809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3130-2","termid":"PBO:0057809"}


id: GO:0043561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation, as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:tb","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational initiation in response to osmotic stress","termid":"GO:0043561"}


id: PBO:0069538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 808, pseudogene","termid":"PBO:0069538"}


id: GO:0110137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of imaginal disc-derived leg joint morphogenesis, the process in which the anatomical structure of the imaginal disc-derived leg joint is generated and organized.","definition_xrefs":["PMID:25329825","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"imaginal disc-derived leg morphogenesis","termid":"GO:0007480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of imaginal disc-derived leg joint morphogenesis","termid":"GO:0110137"}


id: PBO:0060779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B9 pseudogene 1","termid":"PBO:0060779"}


id: PBO:0084983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADHX epimerase; catalyzes isomerization of (R)- and (S)-NADHX; homologous to AIBP in mammals and the N- terminal domain of YjeF in E.coli; enzyme is widespread in eukaryotes, prokaryotes and archaea; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0084983"}


id: GO:0031127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->2) linkage.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"alpha-(1,2)-fucosyltransferase activity","synonyms":[{"name":"alpha-(1->2)-fucosyltransferase activity","type":"exact"},{"name":"alpha-1,2-fucosyltransferase activity","type":"exact"}],"termid":"GO:0031127"}


id: GO:0048724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the epistomal sclerite over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epistomal sclerite development","termid":"GO:0048724"}


id: MONDO:0015083
data:
  {"annotated_genes":["SJAG_04522","SJAG_04765","SJAG_02278","SJAG_01114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85727,85724,85726,85725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011444"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculomotor nerve paralysis","termid":"MONDO:0001309"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02278":null,"SJAG_04522":null,"SJAG_04765":null},"genotype_count":0,"is_obsolete":false,"name":"nuclear oculomotor paralysis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:100932"],"termid":"MONDO:0015083","terms_by_termid":{"MONDO:0011444":null},"xrefs":{"Monarch":{"xref_id":"0015083"}}}


id: GO:0030598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the N-glycosylic bond at A-4324 in 28S rRNA from rat ribosomes or corresponding sites in 28S RNA from other species.","definition_xrefs":["GOC:mah","EC:3.2.2.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA glycosylase activity","termid":"GO:0030597"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a rRNA","termid":"GO:0140102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"rRNA N-glycosylase activity","secondary_identifiers":["MetaCyc:3.2.2.22-RXN"],"synonyms":[{"name":"RNA N-glycosidase activity","type":"related"},{"name":"gelonin","type":"related"},{"name":"mirabilis antiviral protein","type":"related"},{"name":"momorcochin-S","type":"related"},{"name":"nigrin b","type":"related"},{"name":"rRNA N-glycohydrolase activity","type":"related"},{"name":"rRNA N-glycosidase activity","type":"exact"},{"name":"ribosomal ribonucleate N-glycosidase activity","type":"related"},{"name":"ricin","type":"related"},{"name":"saporins","type":"related"}],"termid":"GO:0030598"}


id: PBO:0030512
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_reversine","termid":"PBO:0030512"}


id: GO:0035149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Creation of the central hole of a tube in an open tracheal system through which gases flow.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube formation","termid":"GO:0035148"},{"relation_name":"is_a","term_name":"regulation of tube architecture, open tracheal system","termid":"GO:0035152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lumen formation, open tracheal system","synonyms":[{"name":"tracheal lumen formation","type":"exact"}],"termid":"GO:0035149"}


id: PBO:0065030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDX5 pseudogene 1","termid":"PBO:0065030"}


id: GO:0051901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial depolarization","termid":"GO:0051900"},{"relation_name":"is_a","term_name":"positive regulation of membrane depolarization","termid":"GO:1904181"},{"relation_name":"positively_regulates","term_name":"mitochondrial depolarization","termid":"GO:0051882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrial depolarization","synonyms":[{"name":"activation of mitochondrial depolarization","type":"narrow"},{"name":"stimulation of mitochondrial depolarization","type":"narrow"},{"name":"up regulation of mitochondrial depolarization","type":"exact"},{"name":"up-regulation of mitochondrial depolarization","type":"exact"},{"name":"upregulation of mitochondrial depolarization","type":"exact"}],"termid":"GO:0051901"}


id: PBO:0060187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC5B antisense RNA 1","termid":"PBO:0060187"}


id: GO:0086093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled acetylcholine receptor signaling pathway, which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled acetylcholine receptor signaling pathway","termid":"GO:0007213"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway involved in heart process","termid":"GO:0086103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled acetylcholine receptor signaling pathway involved in heart process","synonyms":[{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in heart process","type":"exact"},{"name":"G-protein coupled acetylcholine receptor signalling pathway involved in heart process","type":"exact"},{"name":"M2 receptor signaling pathway involved in heart process","type":"narrow"},{"name":"muscarinic receptor signaling pathway involved in heart process","type":"related"}],"termid":"GO:0086093"}


id: PBO:0034758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex subunit (predicted)","termid":"PBO:0034758"}


id: PBO:0078973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 1-1","termid":"PBO:0078973"}


id: PBO:0052487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 2","termid":"PBO:0052487"}


id: GO:0052207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type III secretion system in the first organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of morphology or physiology of other organism via protein secreted by type III secretion system involved in symbiotic interaction (obsolete GO:0052207)","synonyms":[{"name":"modification of morphology or physiology of other organism via protein secreted by type III secretion system during symbiotic interaction","type":"related"}],"termid":"GO:0052207"}


id: PBO:0117428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC20 pseudogene 3","termid":"PBO:0117428"}


id: GO:0045783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that reduces the concentration of calcium in the ER.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium in ER (obsolete GO:0045783)","synonyms":[{"name":"negative regulation of calcium in ER","type":"exact"}],"termid":"GO:0045783"}


id: PBO:0051705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase E","termid":"PBO:0051705"}


id: GO:0140636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which copper is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["PMID:32979421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transport","termid":"GO:0035434"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"copper import into the mitochondrion","termid":"GO:0140636"}


id: PBO:0039635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amine oxidase copper containing 3","termid":"PBO:0039635"}


id: GO:0032753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-4 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-4 production","termid":"GO:0032673"},{"relation_name":"positively_regulates","term_name":"interleukin-4 production","termid":"GO:0032633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-4 production","secondary_identifiers":["GO:0045404","GO:0150135"],"synonyms":[{"name":"activation of interleukin-4 production","type":"narrow"},{"name":"positive regulation of IL-4 production","type":"exact"},{"name":"positive regulation of interleukin-4 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-4 secretion","type":"narrow"},{"name":"stimulation of interleukin-4 production","type":"narrow"},{"name":"up regulation of interleukin-4 production","type":"exact"},{"name":"up-regulation of interleukin-4 production","type":"exact"},{"name":"upregulation of interleukin-4 production","type":"exact"}],"termid":"GO:0032753"}


id: PBO:0045386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase 8","termid":"PBO:0045386"}


id: PBO:0045462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein regulatory complex subunit 3","termid":"PBO:0045462"}


id: GO:0060492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The close range interaction of two or more cells or tissues that causes the cells of the foregut to change their fates and specify the development of the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ induction","termid":"GO:0001759"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"regulation of branching involved in lung morphogenesis","termid":"GO:0061046"},{"relation_name":"positively_regulates","term_name":"lung field specification","termid":"GO:0060424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung induction","termid":"GO:0060492"}


id: PBO:0002382
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-tethered transcription factor","termid":"PBO:0002382"}


id: GO:0070383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an amino group from a cytosine residue in DNA, forming a uracil residue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA deamination","termid":"GO:0045006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA cytosine deamination","termid":"GO:0070383"}


id: GO:1905581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of low-density lipoprotein particle clearance.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:nc","PMID:22848640","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"},{"relation_name":"is_a","term_name":"regulation of low-density lipoprotein particle clearance","termid":"GO:0010988"},{"relation_name":"positively_regulates","term_name":"low-density lipoprotein particle clearance","termid":"GO:0034383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of low-density lipoprotein particle clearance","synonyms":[{"name":"activation of LDL clearance","type":"narrow"},{"name":"activation of low-density lipoprotein particle clearance","type":"narrow"},{"name":"positive regulation of LDL clearance","type":"exact"},{"name":"up regulation of LDL clearance","type":"exact"},{"name":"up regulation of low-density lipoprotein particle clearance","type":"exact"},{"name":"up-regulation of LDL clearance","type":"exact"},{"name":"up-regulation of low-density lipoprotein particle clearance","type":"exact"},{"name":"upregulation of LDL clearance","type":"exact"},{"name":"upregulation of low-density lipoprotein particle clearance","type":"exact"}],"termid":"GO:1905581"}


id: PBO:0045845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 35","termid":"PBO:0045845"}


id: GO:0035033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of histone deacetylase.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"},{"relation_name":"regulates","term_name":"histone deacetylase activity","termid":"GO:0004407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019213"},{"rel_name":"regulates","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0140096"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140096","GO:0003824","GO:0030234","GO:0019213","GO:0033558"],"is_obsolete":false,"name":"histone deacetylase regulator activity","termid":"GO:0035033"}


id: GO:0002039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to one of the p53 family of proteins.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"p53 binding","termid":"GO:0002039"}


id: PBO:0077717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transportin 1 pseudogene 3","termid":"PBO:0077717"}


id: PR:000027578
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1, initiator methionine removed methylated form that is recognized by the HP1-like protein Swi6 in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00663.","definition_xrefs":["PomBase:MAH","PMID:11242054","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Me(K9)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/K9me","type":"exact"},{"name":"hht1/InitMet-/Me:(K10)","type":"exact"},{"name":"hht1/Me(K9)","type":"exact"}],"termid":"PR:000027578"}


id: PBO:0042070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 138","termid":"PBO:0042070"}


id: GO:0007540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which an organism senses the number of X chromosomes and autosomes in its genomic complement and responds to it.","definition_xrefs":["GOC:mr","PMID:20622855","Wikipedia:XY_sex-determination_system","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"primary sex determination, soma","termid":"GO:0007539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex determination, establishment of X:A ratio","termid":"GO:0007540"}


id: PBO:0051488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 5","termid":"PBO:0051488"}


id: PBO:0038678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 4","termid":"PBO:0038678"}


id: PBO:0087325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Soluble GTPase with a role in regulation of membrane traffic; regulates potassium influx; role in membrane organization at trans-Golgi network; required for delivery of Atg9p to the phagophore assembly site during autophagy under high temperature stress; required with Ypt6p for starvation-induced autophagy; required for the CVT pathway under non-starvation conditions; G protein of the Ras superfamily, similar to ADP-ribosylation factor","termid":"PBO:0087325"}


id: FYPO:0000431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which fermentation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal fermentation","termid":"FYPO:0000430"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished fermentation","synonyms":[{"name":"abolished fermentation during mitotic cell cycle","type":"related"},{"name":"absent fermentative metabolism","type":"exact"},{"name":"fermentation abolished","type":"exact"},{"name":"fermentation abolished during vegetative growth","type":"exact"},{"name":"fermentative metabolism abolished","type":"exact"},{"name":"fermentative metabolism: absent","type":"related"}],"termid":"FYPO:0000431"}


id: MONDO:0018538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inherited digestive cancer-predisposing syndrome (obsolete MONDO:0018538)","secondary_identifiers":["Orphanet:425003"],"termid":"MONDO:0018538","xrefs":{"Monarch":{"xref_id":"0018538"}}}


id: PBO:0018209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal family transmembrane transporter (predicted)","termid":"PBO:0018209"}


id: GO:0060383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of DNA strand elongation. DNA strand elongation is the DNA metabolic process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"regulation of DNA strand elongation","termid":"GO:0060382"},{"relation_name":"positively_regulates","term_name":"DNA strand elongation","termid":"GO:0022616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA strand elongation","termid":"GO:0060383"}


id: MONDO:0022545
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metabolism","type":"exact"}],"termid":"GO:0006629","terms_by_termid":{"GO:0001561":null,"GO:0001676":null,"GO:0006506":null,"GO:0006629":null,"GO:0006631":null,"GO:0006633":null,"GO:0006636":null,"GO:0006642":null,"GO:0006643":null,"GO:0006644":null,"GO:0006646":null,"GO:0006654":null,"GO:0006656":null,"GO:0006657":null,"GO:0006658":null,"GO:0006659":null,"GO:0006660":null,"GO:0006661":null,"GO:0006665":null,"GO:0006666":null,"GO:0006672":null,"GO:0006676":null,"GO:0006696":null,"GO:0008202":null,"GO:0008204":null,"GO:0008299":null,"GO:0008654":null,"GO:0009062":null,"GO:0009107":null,"GO:0009240":null,"GO:0009395":null,"GO:0010142":null,"GO:0010510":null,"GO:0010895":null,"GO:0016024":null,"GO:0016042":null,"GO:0016095":null,"GO:0016104":null,"GO:0016125":null,"GO:0019216":null,"GO:0019287":null,"GO:0019348":null,"GO:0019367":null,"GO:0019408":null,"GO:0019432":null,"GO:0019433":null,"GO:0030148":null,"GO:0030258":null,"GO:0030497":null,"GO:0032049":null,"GO:0032443":null,"GO:0033386":null,"GO:0034625":null,"GO:0034638":null,"GO:0035336":null,"GO:0035338":null,"GO:0035965":null,"GO:0036092":null,"GO:0036149":null,"GO:0042758":null,"GO:0042759":null,"GO:0042761":null,"GO:0043048":null,"GO:0045338":null,"GO:0045540":null,"GO:0045717":null,"GO:0045834":null,"GO:0046339":null,"GO:0046461":null,"GO:0046467":null,"GO:0046474":null,"GO:0046475":null,"GO:0046488":null,"GO:0046512":null,"GO:0046513":null,"GO:0046521":null,"GO:0046854":null,"GO:0050992":null,"GO:0051999":null,"GO:0070452":null,"GO:0071072":null,"GO:1900535":null,"GO:1902635":null,"GO:1902647":null,"GO:1902648":null,"GO:1902767":null,"GO:2001211":null}}


id: GO:0031515
data:
  {"annotated_genes":["SJAG_02386","SJAG_02637"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74400,75266],"is_not":false,"summary":null,"term":"GO:0031515"}]},"cv_name":"cellular_component","definition":"A protein complex involved in the catalysis of the formation of the modified nucleotide 1-methyladenosine (m1A) in tRNA. In yeast, it is a heterotetramer of two subunits, Gcd10p and Gcd14p, while in bacteria and archaea it is a homotetramer.","definition_xrefs":["PMID:10779558","PMID:14739239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase complex","termid":"GO:0043527"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA (m1A) methyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031515","terms_by_termid":{"GO:0031515":null}}


id: PBO:0018118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP14 microtubule-associated protein Dis1","termid":"PBO:0018118"}


id: GO:0018772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,6-trioxoheptanoate + H2O = acetylpyruvate + acetate.","definition_xrefs":["UM-BBD_reactionID:r0094","MetaCyc:R306-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"trioxoheptanoate hydrolase activity","termid":"GO:0018772"}


id: PBO:0086947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor protein involved in selective autophagy during starvation; specifically involved in the transport of cargo protein alpha-mannosidase (Ams1p); Atg19p paralog","termid":"PBO:0086947"}


id: GO:0000761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During conjugation without cellular fusion, the process that results in pairing complementary mating types. Localized morphological, cytological, and cytoskeletal changes connect the mating types without cytoplasmic mixing.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion between unicellular organisms","termid":"GO:0098610"},{"relation_name":"part_of","term_name":"conjugation with mutual genetic exchange","termid":"GO:0000748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"conjugant formation","termid":"GO:0000761"}


id: GO:0008540
data:
  {"annotated_genes":["SJAG_00712","SJAG_01489","SJAG_04088","SJAG_04477","SJAG_00766","SJAG_01544","SJAG_03638","SJAG_01131","SJAG_02992"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73457,73991,77414,78301,78484,78759,79480,79926,80203],"is_not":false,"summary":null,"term":"GO:0008540"}]},"cv_name":"cellular_component","definition":"The subcomplex of the proteasome regulatory particle that directly associates with the proteasome core complex.","definition_xrefs":["GOC:mtg_sensu","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome regulatory particle","termid":"GO:0005838"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_02992":null,"SJAG_03638":null,"SJAG_04088":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome regulatory particle, base subcomplex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0008540","terms_by_termid":{"GO:0008540":null}}


id: PBO:0080725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilms tumor 1 associated protein pseudogene 1","termid":"PBO:0080725"}


id: PBO:0048361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 72","termid":"PBO:0048361"}


id: PBO:0034043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-allelopath_of","termid":"PBO:0034043"}


id: GO:0016986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Plays a role in regulating transcription initiation.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription initiation factor activity (obsolete GO:0016986)","synonyms":[{"name":"transcription initiation factor activity","type":"exact"},{"name":"transcriptional initiation factor activity","type":"exact"}],"termid":"GO:0016986"}


id: PBO:0034811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRP-like ion calcium channel Trp1322","termid":"PBO:0034811"}


id: PBO:0038593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase family member 11","termid":"PBO:0038593"}


id: PBO:0050706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPB2-C11orf52 readthrough (NMD candidate)","termid":"PBO:0050706"}


id: GO:0018809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: E-phenylitaconyl-CoA + H2O = (hydroxymethylphenyl)succinyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete E-phenylitaconyl-CoA hydratase activity (obsolete GO:0018809)","termid":"GO:0018809"}


id: MONDO:0011688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital muscular dystrophy characterized by autosomal recessive inheritance of muscular dystrophy with variable penetrance of intellectual disability and structural brain abnormalities that has material basis in homozygous or compound heterozygous mutation in the FKRP gene on chromosome 19q13.3.","definition_xrefs":["DOID:0110635","PMID:11592034","PMID:14652796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type B","termid":"MONDO:0000172"},{"relation_name":"is_a","term_name":"myopathy caused by variation in FKRP","termid":"MONDO:0700066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066","MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy type B5","secondary_identifiers":["Orphanet:52428","MEDGEN:335764","OMIM:606612","UMLS:C1847759","MESH:C564691"],"synonyms":[{"name":"FKRP-related congenital muscular dystrophy","type":"exact"},{"name":"MDC1C","type":"exact"},{"name":"MDDGB5","type":"exact"},{"name":"congenital muscular dystrophy 1C","type":"exact"},{"name":"congenital muscular dystrophy-FKRP related","type":"exact"},{"name":"muscular dystrophy, congenital, 1C","type":"related"},{"name":"muscular dystrophy, congenital, FKRP-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with or without intellectual disability), type B, 5","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with or without mental retardation), type B, 5","type":"exact"}],"termid":"MONDO:0011688","xrefs":{"Monarch":{"xref_id":"0011688"}}}


id: PR:Q9C0Y8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB24D3.06c gene.","definition_xrefs":["UniProtKB:Q9C0Y8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0613 protein PB24D3.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.06c","synonyms":[{"name":"Spom972h-SPAPB24D3.06c","type":"exact"}],"termid":"PR:Q9C0Y8"}


id: GO:0050229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: medicarpin + NADP+ = vestitone + NADPH.","definition_xrefs":["EC:1.1.1.246","MetaCyc:PTEROCARPIN-SYNTHASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete pterocarpin synthase activity (obsolete GO:0050229)","synonyms":[{"name":"medicarpin:NADP+ 2'-oxidoreductase activity","type":"related"},{"name":"pterocarpan synthase activity","type":"related"}],"termid":"GO:0050229"}


id: PBO:0085111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear ubiquitin protein ligase binding protein; may regulate utilization of nonfermentable carbon sources and endocytosis of plasma membrane proteins; overproduction suppresses chs5 spa2 lethality at high temp; ubiquitinated by Rsp5p, deubiquitinated by Ubp2p; CSR2 has a paralog, ECM21, that arose from the whole genome duplication","termid":"PBO:0085111"}


id: GO:2001099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltotetraoseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrasaccharide transport","termid":"GO:2001098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maltotetraose transport","termid":"GO:2001099"}


id: PBO:0052686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 10","termid":"PBO:0052686"}


id: GO:1905567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport.","definition_xrefs":["GOC:TermGenie","PMID:22848640","GO_REF:0000058","GOC:BHF","GOC:nc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport (obsolete GO:1905567)","synonyms":[{"name":"activation of receptor-mediated endocytosis of LDL","type":"narrow"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"narrow"},{"name":"positive regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"}],"termid":"GO:1905567"}


id: GO:0070262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphoric residues from peptidyl-O-phospho-L-serine to form peptidyl-serine.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine dephosphorylation","termid":"GO:0070262"}


id: MONDO:0007590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemifacial hyperplasia is a rare morphological anomaly of the maxillofacial region characterized by unilateral overgrowth of all facial structures (bone, soft tissues, teeth), called true hemifacial hypertrophy, or overgrowth of one or more but not all facial structures, called partial hemifacial hypertrophy. It may be isolated or related to some syndromes (e.g. Beckwith-Wiedemann, Proteus, Klippel-Trenaunay-Weber, McCune-Albright syndrome, Neurofibromatosis type 1). It may be associated with airway obstruction, sensorineural hearing loss or swallowing difficulties.","definition_xrefs":["Orphanet:141145"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"macroglossia","termid":"MONDO:0015496"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemifacial hypertrophy","secondary_identifiers":["OMIM:133900","UMLS:C1399354","icd11.foundation:2090544963","MEDGEN:452987","GARD:16971"],"synonyms":[{"name":"facial asymmetry","type":"related"},{"name":"facial hemihypertrophy","type":"related"},{"name":"hemifacial hyperplasia","type":"related"},{"name":"hemifacial hypertrophy","type":"exact"}],"termid":"MONDO:0007590","xrefs":{"Monarch":{"xref_id":"0007590"}}}


id: PBO:0039719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3A pseudogene 1","termid":"PBO:0039719"}


id: GO:0019019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A segmented viral genome consisting of three sub-genomic nucleic acids but each nucleic acid is packaged into a different virion.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete tripartite viral genome (obsolete GO:0019019)","termid":"GO:0019019"}


id: MONDO:1010716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute intermittent porphyria that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute intermittent porphyria, non-human animal","termid":"MONDO:1010107"},{"relation_name":"is_a","term_name":"porphyria, domestic cat","termid":"MONDO:1011587"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute intermittent porphyria, domestic cat","secondary_identifiers":["OMIA:001493-9685"],"termid":"MONDO:1010716","xrefs":{"Monarch":{"xref_id":"1010716"}}}


id: GO:0031674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end.","definition_xrefs":["ISBN:0321204131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sarcomere","termid":"GO:0030017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"I band","secondary_identifiers":["Wikipedia:Sarcomere#bands"],"synonyms":[{"name":"I disc","type":"exact"},{"name":"J disc","type":"exact"},{"name":"isotropic disc","type":"exact"}],"termid":"GO:0031674"}


id: PBO:0005817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transporter family protein (predicted)","termid":"PBO:0005817"}


id: PBO:0058259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4637","termid":"PBO:0058259"}


id: GO:0009317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes the first step in long-chain fatty acid biosynthesis. For example, in E. coli the complex is heterohexameric and composed of biotin carbonyl carrier protein, biotin carboxylase and the acetate CoA-transferase complex.","definition_xrefs":["PMID:12121720","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"acetyl-CoA carboxylase complex","synonyms":[{"name":"ACCase complex","type":"exact"}],"termid":"GO:0009317"}


id: PBO:0112310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose receptor C-type 2","termid":"PBO:0112310"}


id: MONDO:0019044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tumor of hematopoietic and lymphoid tissues (obsolete MONDO:0019044)","secondary_identifiers":["Orphanet:68347"],"termid":"MONDO:0019044","xrefs":{"Monarch":{"xref_id":"0019044"}}}


id: PBO:0004814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis factor recycling AAA family ATPase (predicted)","termid":"PBO:0004814"}


id: PBO:0113112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongation factor 2 (eEF2, EF-2), also encoded by EFT2; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin; EFT1 has a paralog, EFT2, that arose from the whole genome duplication","termid":"PBO:0113112"}


id: GO:0060868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals that modulates the rate or extent of floral organ abscission.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of vesicle-mediated transport involved in floral organ abscission by small GTPase mediated signal transduction (obsolete GO:0060868)","termid":"GO:0060868"}


id: MONDO:0004959
data:
  {"annotated_genes":["SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"A clonal proliferation of immunoglobulin-secreting plasma cells. This category includes plasma cell myeloma, plasma cell leukemia, plasmacytoma, monoclonal immunoglobulin deposition disease, and monoclonal gammopathy of undetermined significance.","definition_xrefs":["NCIT:C4665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of mature B-cells","termid":"MONDO:0004949"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"plasma cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1959632","SCTID:415111003","ICD9:238.6","DOID:6536","EFO:0000200","MEDGEN:368758","GARD:19440","MESH:D054219","Orphanet:98282"],"synonyms":[{"name":"plasma cell disorder","type":"related"},{"name":"plasma cell dyscrasia","type":"exact"},{"name":"plasma cell neoplasm","type":"exact"},{"name":"plasma cell tumor","type":"exact"},{"name":"plasma cell tumor, malignant","type":"exact"},{"name":"plasma cell tumour","type":"exact"},{"name":"plasmacytic neoplasm","type":"exact"},{"name":"plasmacytic tumor","type":"exact"},{"name":"plasmacytic tumour","type":"exact"}],"termid":"MONDO:0004959","terms_by_termid":{"MONDO:0009693":null},"xrefs":{"Monarch":{"xref_id":"0004959"}}}


id: PR:O94650
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-like protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13042:SF0","PRO:DNx","OMA:SCHPO02376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like modifier hub1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.03","secondary_identifiers":["UniProtKB:O94650"],"synonyms":[{"name":"Spom972h-UBL5","type":"exact"}],"termid":"PR:O94650"}


id: GO:0016413
data:
  {"annotated_genes":["SJAG_04305","SJAG_00395","SJAG_03305","SJAG_02654"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70957,70309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016287"},{"annotations":[76734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004414"},{"annotations":[76506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009001"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acetyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00395":null,"SJAG_02654":null,"SJAG_03305":null,"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"O-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016413","terms_by_termid":{"GO:0004414":null,"GO:0009001":null,"GO:0016287":null}}


id: PBO:0052633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 1","termid":"PBO:0052633"}


id: GO:0030679
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonuclease P complex located in the cyanelle, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. The best characterized cyanelle ribonuclease P complex, from the alga Cyanophora paradoxa, contains a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules.","definition_xrefs":["GOC:mah","PMID:12045094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multimeric ribonuclease P complex","termid":"GO:0030681"},{"relation_name":"part_of","term_name":"cyanelle","termid":"GO:0009842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cyanelle ribonuclease P complex","synonyms":[{"name":"cyanelle RNase P complex","type":"exact"}],"termid":"GO:0030679"}


id: GO:0042550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stabilization of the photosystem I protein complex, resulting from the phosphorylation of its structural protein subunits, in a cell actively involved in photosynthesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosystem I stabilization","termid":"GO:0042550"}


id: MONDO:0001347
data:
  {"annotated_genes":["SJAG_02396"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008030"}]},"cv_name":"mondo","definition":"An autosomal dominant disorder affecting the skeletal muscles of the face, scapula, and upper arm. Patients present with muscle weakness in these anatomic areas. The muscle weakness eventually spreads to other skeletal muscles as well.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0019303"],"is_obsolete":false,"name":"facioscapulohumeral muscular dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9941","NANDO:2200859","NANDO:1200491","Orphanet:269","icd11.foundation:621965073","MedDRA:10064087","DOID:11727","NORD:1116","MEDGEN:65956","OMIMPS:158900","MESH:D020391","SCTID:399091004","NCIT:C84704","UMLS:C0238288"],"synonyms":[{"name":"FSH dystrophy","type":"exact"},{"name":"FSHD","type":"exact"},{"name":"Landouzy Dejerine muscular dystrophy","type":"exact"},{"name":"Landouzy-Dejerine muscular dystrophy","type":"exact"},{"name":"Landouzy-Dejerine myopathy","type":"exact"},{"name":"facioscapulohumeral dystrophy","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy","type":"exact"},{"name":"facioscapulohumeral myopathy","type":"exact"},{"name":"muscular dystrophy, Landouzy-Dejerine","type":"exact"}],"termid":"MONDO:0001347","terms_by_termid":{"MONDO:0008030":null},"xrefs":{"Monarch":{"xref_id":"0001347"}}}


id: MONDO:0002146
data:
  {"annotated_genes":["SJAG_03077","SJAG_04950","SJAG_00301","SJAG_04398","SJAG_04110","SJAG_03051","SJAG_02829","SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[86674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[87216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[85850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[85560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[87304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[87049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"}]},"cv_name":"mondo","definition":"A disorder characterized by decreased function of the gonads. Clinical manifestations in both males and females include poor libido, infertility, and osteoporosis. Additional signs in males include erectile dysfunction, muscle atrophy, gynecomastia and increased abdominal fat. In females, additional signs include shrinking of the breasts and loss of, or failure to develop menstruation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal disorder","termid":"MONDO:0002259"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_02829":null,"SJAG_03051":null,"SJAG_03077":null,"SJAG_04110":null,"SJAG_04148":null,"SJAG_04398":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"hypogonadism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C9227","SCTID:48130008","UMLS:C0020619","ICD9:253.4","DOID:1924","MESH:D007006","MEDGEN:5711"],"synonyms":[{"name":"gonadotropin deficiency","type":"exact"},{"name":"hypogonadotropism","type":"exact"}],"termid":"MONDO:0002146","terms_by_termid":{"MONDO:0008980":null,"MONDO:0009514":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0013689":null,"MONDO:0014497":null,"MONDO:0030736":null,"MONDO:0054850":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0002146"}}}


id: PBO:0079449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor candidate 1","termid":"PBO:0079449"}


id: FYPO:0001996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect when the cell is subject to nitrogen starvation. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during nitrogen starvation","termid":"FYPO:0001152"},{"relation_name":"is_a","term_name":"RNA absent from cell","termid":"FYPO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"RNA absent from cell during nitrogen starvation","synonyms":[{"name":"RNA absent from cell during nitrogen depletion","type":"exact"},{"name":"RNA absent from cell during nitrogen deprivation","type":"exact"},{"name":"transcripts absent from cell during nitrogen starvation","type":"exact"},{"name":"undetectable cellular RNA level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001996"}


id: PBO:0052941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 25-1","termid":"PBO:0052941"}


id: MONDO:0019582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Self-healing papular mucinosis is a rare form of localized lichen myxedematosus occurring primarily in children and characterized by the development of mucinous papules on various parts of the body (face, neck, trunk, and limbs) that resolve spontaneously within some weeks to months. Systemic symptoms can be observed such as fever, arthralgias and weakness.","definition_xrefs":["Orphanet:90397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized lichen myxedematosus","termid":"MONDO:0019446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"self-healing papular mucinosis","secondary_identifiers":["GARD:19141","MEDGEN:590583","UMLS:C0406657"],"termid":"MONDO:0019582","xrefs":{"Monarch":{"xref_id":"0019582"}}}


id: PR:Q09924
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translation initiation factor eIF-2B subunit delta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01763","PANTHER:PTHR10233:SF14","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF-2B subunit delta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC21E11.06","secondary_identifiers":["UniProtKB:Q09924"],"synonyms":[{"name":"Spom972h-EIF2B4","type":"exact"},{"name":"eIF-2B GDP-GTP exchange factor subunit delta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09924"}


id: MONDO:0016657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"8p11.2 deletion syndrome is a contiguous gene syndrome characterized by the association of congenital spherocytosis, dysmorphic features, growth delay and hypogonadotropic hypogonadism.","definition_xrefs":["Orphanet:251066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 8","termid":"MONDO:0016890"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8p11.2 deletion syndrome","secondary_identifiers":["UMLS:C4304505","SCTID:719646006","GARD:20693","MEDGEN:930174"],"synonyms":[{"name":"Del(8)(p11.2)","type":"exact"},{"name":"monosomy 8p11.2","type":"exact"}],"termid":"MONDO:0016657","xrefs":{"Monarch":{"xref_id":"0016657"}}}


id: GO:0032243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound transport","termid":"GO:0032240"},{"relation_name":"is_a","term_name":"regulation of nucleoside transport","termid":"GO:0032242"},{"relation_name":"negatively_regulates","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of nucleoside transport","synonyms":[{"name":"down regulation of nucleoside transport","type":"exact"},{"name":"down-regulation of nucleoside transport","type":"exact"},{"name":"downregulation of nucleoside transport","type":"exact"},{"name":"inhibition of nucleoside transport","type":"narrow"}],"termid":"GO:0032243"}


id: PBO:0064114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting pseudogene 1","termid":"PBO:0064114"}


id: PATO:0002228
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tapered shape quality inhering in a bearer by virtue of the bearer's tapering gradually to a sharp point.","direct_ancestors":[{"relation_name":"is_a","term_name":"tapered","termid":"PATO:0001500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acuminate","termid":"PATO:0002228"}


id: PBO:0087633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the EGO/GSE complex; the vacuolar/endosomal membrane associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from the endosome to the plasma membrane; identified by homology to Ashbya gossypii; EGO2 has a paralog, EGO4, that arose from the whole genome duplication","termid":"PBO:0087633"}


id: PBO:0067783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 85","termid":"PBO:0067783"}


id: PBO:0057840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3155b","termid":"PBO:0057840"}


id: PBO:0088149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar ubiquitin ligase-substrate adaptor; delivered to vacuole using ubiquitin as a sorting signal; presumably functions within the endosomal-vacuolar trafficking pathway, affecting events that determine whether plasma membrane proteins are degraded or routed to the plasma membrane; RCR2 has a paralog, RCR1, that arose from the whole genome duplication","termid":"PBO:0088149"}


id: PBO:0073057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDA1 domain containing 1","termid":"PBO:0073057"}


id: PBO:0049719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 4 pseudogene 1","termid":"PBO:0049719"}


id: FYPO:0006007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the duration of localization of a protein to the site of cell division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:26941334","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell division site","termid":"FYPO:0002442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal duration of protein localization to cell division site","synonyms":[{"name":"normal duration of protein localisation to cell division site","type":"exact"},{"name":"normal duration of protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"normal duration of protein localization to cell division site during vegetative growth","type":"exact"},{"name":"normal duration of protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0006007"}


id: GO:0071304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B6 stimulus. Vitamin B6 encompasses pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin B6","termid":"GO:0034516"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B6","termid":"GO:0071304"}


id: MONDO:0005262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired cyst that is present in the central nervous system.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system cyst","secondary_identifiers":["MESH:D020863","NCIT:C4657","UMLS:C0349606","HP:0030724","MEDGEN:138106","SCTID:277333006","EFO:0003760"],"synonyms":[{"name":"CNS cyst","type":"exact"},{"name":"Rathke cleft cysts","type":"related"},{"name":"Rathke's cleft cysts","type":"related"},{"name":"Rathkes cleft cysts","type":"related"},{"name":"central nervous system cyst","type":"exact"},{"name":"central nervous system cyst (disease)","type":"exact"},{"name":"cleft cysts, Rathke's","type":"related"},{"name":"cyst of CNS","type":"exact"},{"name":"cyst of Central nervous system","type":"exact"},{"name":"cyst of the CNS","type":"exact"},{"name":"cyst of the Central nervous system","type":"exact"},{"name":"cyst, suprasellar","type":"related"},{"name":"cysts, Rathke cleft","type":"related"},{"name":"cysts, central nervous system","type":"related"},{"name":"cysts, suprasellar","type":"related"},{"name":"suprasellar cyst","type":"related"},{"name":"suprasellar cysts","type":"related"}],"termid":"MONDO:0005262","xrefs":{"Monarch":{"xref_id":"0005262"}}}


id: PBO:0070472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 7","termid":"PBO:0070472"}


id: PBO:0029638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_ubiquitination","termid":"PBO:0029638"}


id: PBO:0061129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMBR antisense RNA 1","termid":"PBO:0061129"}


id: PBO:0054958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2372","termid":"PBO:0054958"}


id: PBO:0088746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex WD repeat subunit Hip2","termid":"PBO:0088746"}


id: PBO:0027660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitochondrion","termid":"PBO:0027660"}


id: PBO:0045882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 6","termid":"PBO:0045882"}


id: PBO:0040881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 6","termid":"PBO:0040881"}


id: GO:1900633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentadecane.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentadecane metabolic process","synonyms":[{"name":"pentadecane metabolism","type":"exact"}],"termid":"GO:1900633"}


id: GO:0022610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The attachment of a cell or organism to a substrate, another cell, or other organism. Biological adhesion includes intracellular attachment between membrane regions.","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete biological adhesion (obsolete GO:0022610)","termid":"GO:0022610"}


id: FYPO:0000250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing L-proline as the nitrogen source.","definition_xrefs":["PomBase:mah","PMID:24344203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on proline nitrogen source","synonyms":[{"name":"decreased growth on proline nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on proline nitrogen source","type":"exact"},{"name":"growth defect, slow growth with proline nitrogen source","type":"related"},{"name":"reduced cell growth on proline nitrogen source","type":"related"},{"name":"slow cell growth on proline nitrogen source","type":"narrow"}],"termid":"FYPO:0000250"}


id: MONDO:0002434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a oculomotor nerve.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant cranial nerve neoplasm","termid":"MONDO:0002433"},{"relation_name":"is_a","term_name":"oculomotor nerve neoplasm","termid":"MONDO:0002435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"oculomotor nerve cancer","secondary_identifiers":["SCTID:93929003","MEDGEN:195786","NCIT:C6995","UMLS:C0686417","DOID:2816"],"synonyms":[{"name":"IIIrd cranial nerve neoplasm, malignant","type":"exact"},{"name":"cancer of oculomotor nerve","type":"exact"},{"name":"malignant neoplasm of oculomotor nerve","type":"exact"},{"name":"malignant oculomotor nerve neoplasm","type":"exact"},{"name":"malignant oculomotor nerve tumor","type":"related"},{"name":"malignant oculomotor nerve tumour","type":"related"},{"name":"oculomotor nerve cancer","type":"exact"},{"name":"oculomotor nerve neoplasm, malignant","type":"exact"},{"name":"primary malignant neoplasm of oculomotor nerve","type":"exact"}],"termid":"MONDO:0002434","xrefs":{"Monarch":{"xref_id":"0002434"}}}


id: MOD:00235
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-nitrosyl-L-cysteine.","definition_xrefs":["PubMed:11562475","PubMed:10442087","PubMed:8637569","RESID:AA0230","PubMed:15688001","PubMed:8626764","Unimod:275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-nitrosyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-nitrososulfanyl-propanoic acid","type":"exact"},{"name":"L-cysteine nitrite ester","type":"exact"},{"name":"MOD_RES S-nitrosocysteine","type":"exact"},{"name":"Nitrosyl","type":"related"},{"name":"S-nitrosocysteine","type":"exact"},{"name":"S-nitrosyl-L-cysteine","type":"exact"},{"name":"S-nitrosylation","type":"related"},{"name":"SNOCys","type":"exact"}],"termid":"MOD:00235"}


id: GO:2000513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of granzyme A production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"is_a","term_name":"regulation of granzyme A production","termid":"GO:2000511"},{"relation_name":"positively_regulates","term_name":"granzyme A production","termid":"GO:0035746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of granzyme A production","termid":"GO:2000513"}


id: GO:0036460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stress acting at the cell envelope.","definition_xrefs":["PMID:15882407","PMID:15101969","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cell envelope stress","synonyms":[{"name":"envelope stress response","type":"exact"}],"termid":"GO:0036460"}


id: FYPO:0001492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable and longer than normal, and has a greater length:diameter ratio than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"viable elongated vegetative cell","synonyms":[{"name":"elongated viable vegetative cell","type":"exact"},{"name":"viable elongated cell during vegetative growth","type":"exact"},{"name":"viable elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001492"}


id: MONDO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kleine-Levin syndrome (obsolete MONDO:0000692)","termid":"MONDO:0000692","xrefs":{"Monarch":{"xref_id":"0000692"}}}


id: PBO:0027554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding_during_recovery_from_nitrogen_starvation","termid":"PBO:0027554"}


id: PBO:0043854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping protein inhibiting regulator of actin dynamics","termid":"PBO:0043854"}


id: PBO:0046102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 5","termid":"PBO:0046102"}


id: GO:0047334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fructose-6-phosphate + diphosphate = phosphate + fructose-1,6-bisphosphate.","definition_xrefs":["MetaCyc:2.7.1.90-RXN","EC:2.7.1.90"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphofructokinase activity","termid":"GO:0008443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diphosphate-fructose-6-phosphate 1-phosphotransferase activity","secondary_identifiers":["RHEA:13613"],"synonyms":[{"name":"6-phosphofructokinase (diphosphate) activity","type":"related"},{"name":"6-phosphofructokinase (pyrophosphate) activity","type":"related"},{"name":"diphosphate-dependent 6-phosphofructose-1-kinase activity","type":"related"},{"name":"diphosphate:D-fructose-6-phosphate 1-phosphotransferase activity","type":"related"},{"name":"inorganic pyrophosphate-dependent phosphofructokinase activity","type":"related"},{"name":"inorganic pyrophosphate-phosphofructokinase activity","type":"related"},{"name":"pyrophosphate--fructose 6-phosphate 1-phosphotransferase activity","type":"related"},{"name":"pyrophosphate-dependent 6-phosphofructose-1-kinase activity","type":"related"},{"name":"pyrophosphate-dependent phosphofructo-1-kinase activity","type":"related"},{"name":"pyrophosphate-fructose 6-phosphate phosphotransferase activity","type":"related"}],"termid":"GO:0047334"}


id: PBO:0087181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A14","termid":"PBO:0087181"}


id: PR:Q09799
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein KRI1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00289","PANTHER:PTHR14490:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kri1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.05","secondary_identifiers":["UniProtKB:Q09799"],"synonyms":[{"name":"Spom972h-KRI1","type":"exact"}],"termid":"PR:Q09799"}


id: MONDO:0012690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Noonan syndrome in which the cause of the disease is a mutation in the RAF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome","termid":"MONDO:0018997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome 5","secondary_identifiers":["MESH:C548083","NCIT:C176933","MEDGEN:370589","DOID:0060583","GARD:10700","OMIM:611553","UMLS:C1969057"],"synonyms":[{"name":"NS5","type":"exact"},{"name":"Noonan syndrome 5","type":"exact"},{"name":"Noonan syndrome caused by mutation in RAF1","type":"exact"},{"name":"Noonan syndrome type 5","type":"exact"},{"name":"RAF1 Noonan syndrome","type":"exact"},{"name":"RAF1 gene related Noonan syndrome","type":"related"}],"termid":"MONDO:0012690","xrefs":{"Monarch":{"xref_id":"0012690"}}}


id: GO:0018059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidative deamination of N-terminal peptidyl-serine to form pyruvic acid with an amide bond between its 1-carboxyl group and the N-terminal residue.","definition_xrefs":["RESID:AA0127"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-serine deamination (obsolete GO:0018059)","termid":"GO:0018059"}


id: GO:1900831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-leucine.","definition_xrefs":["GOC:TermGenie","PMID:10918062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid metabolic process","termid":"GO:0009081"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"D-leucine metabolic process","synonyms":[{"name":"D-leucine metabolism","type":"exact"}],"termid":"GO:1900831"}


id: FYPO:0007486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle forms with microtubules emanating from only one pole during the second meiotic nuclear division.","definition_xrefs":["PMID:27889481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0002399","FYPO:0000120","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"monopolar spindle during meiosis II","synonyms":[{"name":"V-shaped spindle during meiosis II","type":"related"},{"name":"fan-shaped spindle during meiosis II","type":"exact"},{"name":"monopolar spindle during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007486"}


id: PR:Q09714
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.08c gene.","definition_xrefs":["UniProtKB:Q09714","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B11.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.08c","synonyms":[{"name":"Spom972h-SPAC18B11.08c","type":"exact"}],"termid":"PR:Q09714"}


id: PBO:0056514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscleblind like splicing regulator 3","termid":"PBO:0056514"}


id: PR:Q10238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic PUF family protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.05","synonyms":[{"name":"Spom972h-mpf1","type":"exact"}],"termid":"PR:Q10238"}


id: GO:0043579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an elaioplast, a leucoplast in which oil is stored.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leucoplast organization","termid":"GO:0009659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"elaioplast organization","synonyms":[{"name":"elaioplast organisation","type":"exact"},{"name":"elaioplast organization and biogenesis","type":"related"}],"termid":"GO:0043579"}


id: PBO:0073172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L family member 3","termid":"PBO:0073172"}


id: PBO:0074730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 88","termid":"PBO:0074730"}


id: PBO:0034205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_model_of","termid":"PBO:0034205"}


id: GO:0140748
data:
  {"annotated_genes":["SJAG_04771","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87860,92762],"is_not":false,"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ascospore wall (1->3)-beta-D-glucan biosynthetic process.","definition_xrefs":["PMID:19189958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ascospore wall (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0060624"},{"relation_name":"is_a","term_name":"positive regulation of (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0060635"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"ascospore wall (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0034413"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0008150","GO:0007049","GO:0005975"],"is_obsolete":false,"name":"positive regulation of regulation of ascospore wall (1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140748","terms_by_termid":{"GO:0140748":null}}


id: MONDO:0000247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare but potentially life-threatening disorder characterized by the proliferation of histiocytes and macrophages and phagocytosis of red blood cells, white blood cells, and platelets. It may be inherited or secondary, due to infections, autoimmune disorders, or underlying malignancies. Signs and symptoms include fever, lymphadenopathy, hepatomegaly, splenomegaly, and pancytopenia.","definition_xrefs":["NCIT:C34792"],"gene_count":0,"genotype_count":0,"name":"obsolete hemophagocytic lymphohistiocytosis (obsolete MONDO:0000247)","termid":"MONDO:0000247","xrefs":{"Monarch":{"xref_id":"0000247"}}}


id: PR:O14310
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- npp106 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin npp106 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.14","synonyms":[{"name":"Spom972h-npp106","type":"exact"},{"name":"nuclear pore protein npp106 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14310"}


id: PBO:0003500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylamidoimidazolesuccinocarboxamide synthase, SAICAR synthetase, Ade7","termid":"PBO:0003500"}


id: PBO:0091085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin-associated NEDD8-dissociated protein Knd1","termid":"PBO:0091085"}


id: FYPO:0003481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable and elongated, and in which mitosis begins when the cell is longer than normal.","definition_xrefs":["PMID:24013504","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"output_of","term_name":"mitotic G2/M phase transition delay","termid":"FYPO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"viable elongated vegetative cell, elongated upon mitotic entry","synonyms":[{"name":"viable elongated vegetative cell with entry into mitosis at increased length","type":"exact"},{"name":"viable elongated vegetative cell with mitotic entry at increased length","type":"exact"},{"name":"viable elongated vegetative cell, elongated upon entry into mitosis","type":"exact"}],"termid":"FYPO:0003481"}


id: PBO:0070751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 7","termid":"PBO:0070751"}


id: GO:0016116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetraterpenoid metabolic process","termid":"GO:0016108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"carotenoid metabolic process","synonyms":[{"name":"carotenoid metabolism","type":"exact"}],"termid":"GO:0016116"}


id: GO:0016488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the sesquiterpenoid alcohol farnesol, 3,7,11-trimethyl-2,6,10,dodecatrien-1-ol.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenol catabolic process","termid":"GO:0016095"},{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"farnesol metabolic process","termid":"GO:0016487"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"farnesol catabolic process","synonyms":[{"name":"farnesol breakdown","type":"exact"},{"name":"farnesol catabolism","type":"exact"},{"name":"farnesol degradation","type":"exact"}],"termid":"GO:0016488"}


id: GO:1900161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phospholipid scramblase activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phospholipid scramblase activity (obsolete GO:1900161)","termid":"GO:1900161"}


id: PR:O13739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aro7 gene.","definition_xrefs":["UniProtKB:O13739","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate mutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.04c","synonyms":[{"name":"CM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aro7","type":"exact"}],"termid":"PR:O13739"}


id: PBO:0066159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP8 pseudogene 2","termid":"PBO:0066159"}


id: PBO:0031217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_replication","termid":"PBO:0031217"}


id: PBO:0067701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 9","termid":"PBO:0067701"}


id: PBO:0090816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster protein, implicated in respiratory complex assembly","termid":"PBO:0090816"}


id: GO:0022034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of rhombomere cells, resulting in the expansion of the cell population.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere cell proliferation","termid":"GO:0022034"}


id: MONDO:0003328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from the fallopian tube and originates from mesothelial cells. It is characterized by the presence of gland-like structures that are lined by flat or cuboidal cells. It is usually discovered as an incidental finding.","definition_xrefs":["NCIT:C40129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube benign neoplasm","termid":"MONDO:0000645"},{"relation_name":"is_a","term_name":"benign mesothelioma","termid":"MONDO:0002373"},{"relation_name":"is_a","term_name":"adenomatoid tumor","termid":"MONDO:0004230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube adenomatoid tumor","secondary_identifiers":["DOID:5196","MEDGEN:273291","UMLS:C1517110"],"synonyms":[{"name":"fallopian tube adenomatoid tumor","type":"exact"}],"termid":"MONDO:0003328","xrefs":{"Monarch":{"xref_id":"0003328"}}}


id: PBO:0070518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 17","termid":"PBO:0070518"}


id: GO:1901577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alkane biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"alkane biosynthetic process","termid":"GO:0043447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alkane biosynthetic process","synonyms":[{"name":"regulation of alkane anabolism","type":"exact"},{"name":"regulation of alkane biosynthesis","type":"exact"},{"name":"regulation of alkane formation","type":"exact"},{"name":"regulation of alkane synthesis","type":"exact"}],"termid":"GO:1901577"}


id: PBO:0086921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative Zn(II)2Cys6 motif containing transcription factor; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription; similar to S. kluyveri Urc2p involved in uracil catabolism","termid":"PBO:0086921"}


id: FYPO:0005826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more generation of precursor metabolites and energy RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Generation of precursor metabolites and energy RNAs are transcribed from genes whose products are involved in the formation of precursor metabolites and the liberation of energy from these substances.","definition_xrefs":["PomBase:mah","GO:0006091","PMID:25102102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of generation of precursor metabolites and energy gene mRNA during vegetative growth","synonyms":[{"name":"decreased generation of precursor metabolites and energy RNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of generation of precursor metabolites and energy RNA during mitotic cell cycle","type":"related"},{"name":"decreased level of generation of precursor metabolites and energy gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of generation of precursor metabolites and energy transcripts during vegetative growth","type":"exact"},{"name":"reduced level of generation of precursor metabolites and energy gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005826"}


id: PBO:0004147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human mitofilin ortholog (predicted)","termid":"PBO:0004147"}


id: PBO:0041639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 F","termid":"PBO:0041639"}


id: PBO:0070137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 51 pseudogene","termid":"PBO:0070137"}


id: MONDO:0100307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adult Refsum disease in which the cause of the disease is a mutation in the PEX7 gene.","definition_xrefs":["PMID:12522768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX7 defect","termid":"MONDO:0100272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0005244","MONDO:0019053","MONDO:0006025"],"is_obsolete":false,"name":"adult Refsum disease due to PEX7 defect","synonyms":[{"name":"adult Refsum disease due to PEX7 defect","type":"exact"}],"termid":"MONDO:0100307","xrefs":{"Monarch":{"xref_id":"0100307"}}}


id: GO:0015472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in the correct assembly of fimbria, extracellular organelles that are used to attach a bacterial cell to a surface, but is not a component of the fimbrium when performing its normal biological function.","definition_xrefs":["GOC:rb","PMID:7906046","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete fimbrium-specific chaperone activity (obsolete GO:0015472)","synonyms":[{"name":"fimbrium-specific chaperone activity","type":"exact"}],"termid":"GO:0015472"}


id: PBO:0062289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily L member 2","termid":"PBO:0062289"}


id: MONDO:1010767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitiligo that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitiligo, non-human animal","termid":"MONDO:1010136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitiligo, horse","secondary_identifiers":["OMIA:001055-9796"],"termid":"MONDO:1010767","xrefs":{"Monarch":{"xref_id":"1010767"}}}


id: MONDO:0004556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare squamous cell carcinoma that either arises from or is associated with the presence of inverted papilloma in the nose.","definition_xrefs":["NCIT:C27389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasal cavity carcinoma","termid":"MONDO:0003212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"carcinoma arising in nasal papillomatosis","secondary_identifiers":["DOID:8415","MEDGEN:272434","UMLS:C1332840"],"synonyms":[{"name":"carcinoma arising in nasal papillomatosis","type":"exact"}],"termid":"MONDO:0004556","xrefs":{"Monarch":{"xref_id":"0004556"}}}


id: GO:0051060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic linkages in pullulan (a linear polymer of alpha-(1,6)-linked maltotriose units) and in amylopectin and glycogen, and the a- and b-limit dextrins of amylopectin and glycogen.","definition_xrefs":["EC:3.2.1.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"pullulanase activity","secondary_identifiers":["MetaCyc:RXN-1824"],"synonyms":[{"name":"R-enzyme","type":"related"},{"name":"alpha-dextrin endo-1,6-alpha-glucosidase activity","type":"exact"},{"name":"amylopectin 6-glucanohydrolase activity","type":"exact"},{"name":"bacterial debranching enzyme","type":"related"},{"name":"debranching enzyme activity","type":"broad"},{"name":"limit dextrinase","type":"related"},{"name":"pullulan 6-glucanohydrolase activity","type":"exact"},{"name":"pullulan alpha-1,6-glucanohydrolase activity","type":"related"}],"termid":"GO:0051060"}


id: PBO:0006227
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA level","termid":"PBO:0006227"}


id: GO:0120308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an axonemal outer doublet, a part of an axoneme consisting of a doublet microtubule.","definition_xrefs":["GOC:ach","GOC:krc","PMID:16278296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"axoneme assembly","termid":"GO:0035082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226","GO:0044085"],"is_obsolete":false,"name":"axonemal outer doublet assembly","synonyms":[{"name":"axonemal outer doublet biogenesis","type":"exact"},{"name":"axonemal outer doublet formation","type":"exact"},{"name":"axonemal outer doublet morphogenesis","type":"exact"},{"name":"axoneme outer doublet assembly","type":"exact"},{"name":"outer doublet assembly","type":"broad"},{"name":"outer-doublet microtubule assembly","type":"broad"}],"termid":"GO:0120308"}


id: PBO:0090615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Urb1","termid":"PBO:0090615"}


id: PBO:0079204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSR2 ribosome maturation factor","termid":"PBO:0079204"}


id: GO:0008318
data:
  {"annotated_genes":["SJAG_04434","SJAG_03029","SJAG_02583","SJAG_04923","SJAG_03810"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74303,71653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004662"},{"annotations":[73919,71652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004660"},{"annotations":[74206,101722,79177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004663"}]},"cv_name":"molecular_function","definition":"Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_03029":null,"SJAG_03810":null,"SJAG_04434":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0140096","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein prenyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0008244"],"termid":"GO:0008318","terms_by_termid":{"GO:0004660":null,"GO:0004662":null,"GO:0004663":null}}


id: FYPO:0003881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mitochondrial DNA measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular mtDNA level","termid":"FYPO:0003769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"mtDNA absent from cell","synonyms":[{"name":"absent mtDNA","type":"exact"},{"name":"mitochondrial DNA absent from cell","type":"exact"},{"name":"mtDNA absent from cell during mitotic cell cycle","type":"related"},{"name":"mtDNA absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003881"}


id: GO:0042186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of o-xylene, (1,2-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"o-xylene metabolic process","termid":"GO:0018950"},{"relation_name":"is_a","term_name":"xylene catabolic process","termid":"GO:0042184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"o-xylene catabolic process","synonyms":[{"name":"o-xylene breakdown","type":"exact"},{"name":"o-xylene catabolism","type":"exact"},{"name":"o-xylene degradation","type":"exact"},{"name":"ortho-xylene catabolic process","type":"exact"},{"name":"ortho-xylene catabolism","type":"exact"}],"termid":"GO:0042186"}


id: PBO:0029919
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_ergosterol_level","termid":"PBO:0029919"}


id: GO:0000445
data:
  {"annotated_genes":["SJAG_04115","SJAG_00992","SJAG_04310","SJAG_04202","SJAG_05328","SJAG_04536"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64461,76328,77031,102178,111429,119226],"is_not":false,"summary":null,"term":"GO:0000445"}]},"cv_name":"cellular_component","definition":"The THO complex when it is part of the TREX (TRanscription EXport) complex that is involved in coupling transcription to export of mRNAs to the cytoplasm. In S. cerevisiae, it is composed of four subunits: Hpr1, Tho2, Thp1, and Mft1, while the human complex is composed of 7 subunits.","definition_xrefs":["PMID:11979277","PMID:16983072","GOC:krc","PMID:11060033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"THO complex","termid":"GO:0000347"},{"relation_name":"part_of","term_name":"transcription export complex","termid":"GO:0000346"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00992":null,"SJAG_04115":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04536":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"THO complex part of transcription export complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"THO complex part of TREX complex","type":"exact"}],"termid":"GO:0000445","terms_by_termid":{"GO:0000445":null}}


id: PBO:0064956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 8","termid":"PBO:0064956"}


id: PBO:0075189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 1","termid":"PBO:0075189"}


id: PBO:0001872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein Pep5/Vps11-like (predicted)","termid":"PBO:0001872"}


id: MONDO:0014622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nonepidermolytic palmoplantar keratoderma (obsolete MONDO:0006588)","termid":"MONDO:0006588"},{"relation_name":"is_a","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"isolated focal non-epidermolytic palmoplantar keratoderma","secondary_identifiers":["DOID:0111708","MEDGEN:895056","GARD:17781","OMIM:616400","Orphanet:448264","UMLS:C4225339","DOID:0111711"],"synonyms":[{"name":"FNEPPK2","type":"related"},{"name":"palmoplantar keratoderma, nonepidermolytic, focal 2","type":"related"},{"name":"palmoplantar keratoderma, nonepidermolytic, focal type 2","type":"exact"}],"termid":"MONDO:0014622","xrefs":{"Monarch":{"xref_id":"0014622"}}}


id: MONDO:0013105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"},{"relation_name":"is_a","term_name":"basal cell carcinoma, susceptibility to","termid":"MONDO:0100047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal cell carcinoma, susceptibility to, 5","secondary_identifiers":["OMIM:613062","UMLS:C2751601","MEDGEN:414060"],"synonyms":[{"name":"BCC5","type":"exact"},{"name":"basal cell carcinoma, susceptibility to, 5","type":"exact"}],"termid":"MONDO:0013105","xrefs":{"Monarch":{"xref_id":"0013105"}}}


id: PBO:0044129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 15","termid":"PBO:0044129"}


id: MONDO:0020695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of cerebral palsy characterized by decreased muscle tone.","definition_xrefs":["NCIT:C116906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral palsy","termid":"MONDO:0006497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotonic cerebral palsy","secondary_identifiers":["MEDGEN:98296","SCTID:192958009","UMLS:C0394007"],"synonyms":[{"name":"hypotonic cerebral palsy","type":"exact"}],"termid":"MONDO:0020695","xrefs":{"Monarch":{"xref_id":"0020695"}}}


id: MONDO:0034443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic non-acquired premature ovarian failure (obsolete MONDO:0034443)","secondary_identifiers":["Orphanet:485382"],"termid":"MONDO:0034443","xrefs":{"Monarch":{"xref_id":"0034443"}}}


id: GO:0042131
data:
  {"annotated_genes":["SJAG_01970","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110762,110763],"is_not":false,"summary":null,"term":"GO:0042131"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: thiamine phosphate + H2O = thiamine + phosphate.","definition_xrefs":["PMID:197075","RHEA:47948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"thiamine phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.3.100"],"synonyms":[{"name":"ThMPase","type":"exact"},{"name":"thiamin monophosphate phosphatase","type":"exact"},{"name":"thiamin phosphate phosphatase activity","type":"exact"}],"termid":"GO:0042131","terms_by_termid":{"GO:0042131":null}}


id: PBO:0029962
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_hydrogen_ion_transporting_ATP_synthase_activity,_rotational_mechanism","termid":"PBO:0029962"}


id: FYPO:0002835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An RNA metabolism phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from the centromere outer repeat region are absent.","definition_xrefs":["PMID:20211136","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromeric outer repeat transcripts absent","termid":"FYPO:0000273"},{"relation_name":"is_a","term_name":"decreased centromeric outer repeat transcript-derived siRNA level","termid":"FYPO:0004201"},{"relation_name":"is_a","term_name":"siRNA absent from cell","termid":"FYPO:0006076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"centromeric outer repeat transcript-derived siRNA absent","synonyms":[{"name":"centromere outer repeat transcript-derived siRNA absent","type":"exact"},{"name":"centromeric outer repeat transcript-derived siRNA absent during mitotic cell cycle","type":"related"},{"name":"centromeric outer repeat transcript-derived siRNA absent during vegetative growth","type":"exact"},{"name":"centromeric outer repeat transcript-derived siRNA undetectable","type":"exact"},{"name":"siRNAs homologous to outer repeats absent","type":"exact"},{"name":"siRNAs homologous to outer repeats undetectable","type":"exact"}],"termid":"FYPO:0002835"}


id: GO:2000008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to the cell surface.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to cell surface","termid":"GO:0034394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell surface","synonyms":[{"name":"regulation of protein localisation at cell surface","type":"exact"},{"name":"regulation of protein localization at cell surface","type":"exact"}],"termid":"GO:2000008"}


id: GO:0019491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ectoine (1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid), a tetrahydropyrimidine commonly synthesized by halophilic bacteria.","definition_xrefs":["GOC:jl","PMID:11823218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectoine metabolic process","termid":"GO:0042399"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ectoine biosynthetic process","secondary_identifiers":["MetaCyc:P101-PWY"],"synonyms":[{"name":"ectoine anabolism","type":"exact"},{"name":"ectoine biosynthesis","type":"exact"},{"name":"ectoine formation","type":"exact"},{"name":"ectoine synthesis","type":"exact"}],"termid":"GO:0019491"}


id: MONDO:1011084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, cattle","secondary_identifiers":["OMIA:001033-9913"],"termid":"MONDO:1011084","xrefs":{"Monarch":{"xref_id":"1011084"}}}


id: PBO:0067303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 388, pseudogene","termid":"PBO:0067303"}


id: GO:0009713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol-containing compound biosynthetic process","synonyms":[{"name":"catechol anabolism","type":"related"},{"name":"catechol biosynthesis","type":"related"},{"name":"catechol biosynthetic process","type":"related"},{"name":"catechol formation","type":"related"},{"name":"catechol synthesis","type":"related"}],"termid":"GO:0009713"}


id: GO:0160055
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of at least GAP45 (gliding-associated protein), GAP50 and myosin heavy and light chains. Anchored via GAP50 to the inner membrane complex of motile and invasive forms of apicomplexan parasites and regulates parasite gliding motility and invasion of host cells.","definition_xrefs":["PMID:19577950","PMID:12139608","PMID:15123738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glideosome","termid":"GO:0160055"}


id: GO:2001004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of pectin catabolic process","termid":"GO:2001003"},{"relation_name":"negatively_regulates","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of pectin catabolic process","synonyms":[{"name":"negative regulation of pectin breakdown","type":"exact"},{"name":"negative regulation of pectin catabolism","type":"exact"},{"name":"negative regulation of pectin degradation","type":"exact"}],"termid":"GO:2001004"}


id: PR:Q09746
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An F-BAR and double SH3 domains protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein BZZ1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.05c","secondary_identifiers":["UniProtKB:Q09746"],"synonyms":[{"name":"SPBC12C2.05c","type":"related"},{"name":"Spom972h-FCHSD1","type":"exact"}],"termid":"PR:Q09746"}


id: GO:0031500
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A high molecular weight complex characterized in S. pombe containing the cell-end anchoring protein Tea1. This complex is transported to the cell ends by microtubules and is involved in bipolar growth and the maintennce of normal cell polarity.","definition_xrefs":["PMID:15936270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"},{"relation_name":"part_of","term_name":"polarisome","termid":"GO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0015630","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Tea1 cell-end complex","termid":"GO:0031500"}


id: GO:0044799
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric protein complex with iron-sulfur and molybdenum cofactors that functions as a terminal reductase in electron transport pathways that operate during anaerobic nitrate respiration. In E. coli electrons are passed from the FdnGHI complex to the NarGHI complex via menoquinone and menaquinol. Within NarGHI, electrons are passed from the two heme molecules in the NarI subunit down a Fe-S cluster chain in the NarH and NarG subunits to the Molybdenum cofactor, Mo-bisMGD, in the NarG subunit.","definition_xrefs":["PMID:17964535","PMID:11289299","PMID:12910261","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase complex","termid":"GO:0009325"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NarGHI complex","synonyms":[{"name":"cytoplasmic membrane-bound quinol-nitrate oxidoreductase","type":"exact"},{"name":"nitrate reductase A","type":"exact"}],"termid":"GO:0044799"}


id: PBO:0077396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 132D","termid":"PBO:0077396"}


id: FYPO:0002093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is decreased during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"decreased meiotic sister chromatid cohesion","synonyms":[{"name":"decreased sister chromatid cohesion during meiosis","type":"exact"},{"name":"reduced meiotic sister chromatid cohesion","type":"exact"}],"termid":"FYPO:0002093"}


id: FYPO:0006035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitochondrial membrane potential, i.e. the electric potential existing across the mitochondrial membrane, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:14767070","GO:0051881","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitochondrion","termid":"FYPO:0006034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitochondrial membrane potential","synonyms":[{"name":"normal mitochondrial membrane polarization","type":"exact"},{"name":"normal mitochondrial membrane potential during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial membrane potential during vegetative growth","type":"exact"}],"termid":"FYPO:0006035"}


id: PBO:0091824
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by A. thaliana cdc2bAt","termid":"PBO:0091824"}


id: GO:0046029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol + NAD+ = D-mannose + H+ + NADH.","definition_xrefs":["RHEA:15029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"},{"relation_name":"is_a","term_name":"hexitol dehydrogenase activity","termid":"GO:0031320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"mannitol dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.255-RXN","KEGG_REACTION:R07135","EC:1.1.1.255"],"synonyms":[{"name":"MTD activity","type":"related"},{"name":"NAD-dependent mannitol dehydrogenase activity","type":"broad"},{"name":"mannitol:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0046029"}


id: PBO:0064551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 13, pseudogene","termid":"PBO:0064551"}


id: PBO:0076331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYS1-DBNDD2 readthrough (NMD candidate)","termid":"PBO:0076331"}


id: FYPO:0006610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein that is normally localized intermittently to the Cdr2 medial cortical node complex is associated with the complex for periods of longer duration than normal.","definition_xrefs":["PMID:29514920","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intermittent protein localization to Cdr2 medial cortical node complex","termid":"FYPO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein dwell time during intermittent localization to Cdr2 medial cortical node complex","synonyms":[{"name":"increased duration of bursts of intermittent protein localization to Cdr2 medial cortical node complex","type":"related"},{"name":"increased duration of protein localization bursts to Cdr2 medial cortical node complex","type":"related"},{"name":"increased duration of protein visits to Cdr2 medial cortical node complex","type":"related"},{"name":"increased protein dwell time during intermittent localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"increased protein dwell time during intermittent localization to Cdr2 medial cortical node complex during vegetative growth","type":"exact"},{"name":"increased protein dwell time during transient localization to Cdr2 medial cortical node complex","type":"exact"}],"termid":"FYPO:0006610"}


id: GO:0098501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing one or more phosphate groups from a polynucleotide.","definition_xrefs":["GOC:DOS"],"gene_count":0,"genotype_count":0,"name":"obsolete polynucleotide dephosphorylation (obsolete GO:0098501)","termid":"GO:0098501"}


id: GO:0031581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of hemidesmosomes, integrin-containing protein complexes that bind to laminin in the basal lamina. Hemidesmosomes form the contact between the basal surface of epithelial cells and the underlying basal lamina.","definition_xrefs":["PMID:15983403","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction assembly","termid":"GO:0007044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"hemidesmosome assembly","secondary_identifiers":["Reactome:R-HSA-446107"],"termid":"GO:0031581"}


id: GO:0010520
data:
  {"annotated_genes":["SJAG_03438","SJAG_01677","SJAG_04205","SJAG_02592","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89510,94716,116587],"is_not":false,"summary":null,"term":"GO:0010520"},{"annotations":[108277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[108280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[89403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of recombination during meiosis. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01677":null,"SJAG_02592":null,"SJAG_03438":null,"SJAG_04205":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010520","terms_by_termid":{"GO:0010520":null,"GO:0010845":null,"GO:0010846":null,"GO:0045128":null}}


id: MONDO:0018137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 1 temperature sensitive oculocutaneous albinism (OCA1-TS) is an extremely rare form of OCA1 characterized by the production of temperature sensitive tyrosinase proteins leading to dark hair on the legs, arms and chest (cooler body areas) and white hair on the scalp, axilla and pubic area (warmer body areas).","definition_xrefs":["Orphanet:352737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism type 1","termid":"MONDO:0018135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"temperature-sensitive oculocutaneous albinism type 1","secondary_identifiers":["MEDGEN:337736","UMLS:C1847132","GARD:17530"],"synonyms":[{"name":"OCA1-TS","type":"exact"},{"name":"TS OCA type 1","type":"exact"}],"termid":"MONDO:0018137","xrefs":{"Monarch":{"xref_id":"0018137"}}}


id: FYPO:0005580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more lipid metabolism RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells) during a cellular response to hypoxia. Lipid metabolism RNAs are transcribed from genes whose products are involved in any lipid metabolic process.","definition_xrefs":["PMID:27053105","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of lipid metabolism gene mRNA during vegetative growth","termid":"FYPO:0004880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of lipid metabolism gene mRNA during cellular response to hypoxia","synonyms":[{"name":"decreased level of lipid metabolism gene RNA during cellular response to hypoxia","type":"exact"},{"name":"decreased level of lipid metabolism gene mRNA during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"decreased level of lipid metabolism gene mRNA during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"decreased level of lipid metabolism gene transcripts during cellular response to hypoxia","type":"exact"},{"name":"decreased lipid metabolism gene mRNA accumulation during cellular response to hypoxia","type":"related"},{"name":"reduced level of lipid metabolism gene mRNA during cellular response to hypoxia","type":"exact"}],"termid":"FYPO:0005580"}


id: PBO:0077967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (AGC) 19-1","termid":"PBO:0077967"}


id: SO:0001247
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of synthetic nucleotides.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synthetic_oligo","synonyms":[{"name":"synthetic oligo","type":"exact"}],"termid":"SO:0001247"}


id: PBO:0082962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; induced in response to mycotoxin patulin; ubiquitinated protein similar to the human ring finger motif protein RNF10; predicted to be involved in repair of alkylated DNA due to interaction with MAG1","termid":"PBO:0082962"}


id: GO:0010844
data:
  {"annotated_genes":["SJAG_00266","SJAG_02311"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93102,108289],"is_not":false,"summary":null,"term":"GO:0010844"}]},"cv_name":"molecular_function","definition":"Binding to a genomic region which promotes recombination.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"recombination hotspot binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA binding, recombination hotspot","type":"exact"}],"termid":"GO:0010844","terms_by_termid":{"GO:0010844":null}}


id: PBO:0075459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA8 antisense RNA 1 (head to head)","termid":"PBO:0075459"}


id: PR:Q09758
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein-cysteine N-palmitoyltransferase HHAT-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-bound O-acyltransferase C24H6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.01c","secondary_identifiers":["UniProtKB:Q09758"],"synonyms":[{"name":"Spom972h-HHATL","type":"exact"}],"termid":"PR:Q09758"}


id: GO:0030352
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol-1,4,5,6-tetrakisphosphate + H2O = inositol-1,4,5-trisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"inositol-1,4,5,6-tetrakisphosphate 6-phosphatase activity","termid":"GO:0030352"}


id: MONDO:0100222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any immune dysregulation disease in which the cause of the disease is a mutation in the TNFAIP3 gene.","definition_xrefs":["PMID:32514655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"A20 haploinsufficiency","secondary_identifiers":["NANDO:1200997","NANDO:2200458","UMLS:C5849639","MEDGEN:1845429"],"synonyms":[{"name":"HA20","type":"exact"}],"termid":"MONDO:0100222","xrefs":{"Monarch":{"xref_id":"0100222"}}}


id: PBO:0083739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the conserved oligomeric Golgi complex; a cytosolic tethering complex (Cog1p through Cog8p) that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments","termid":"PBO:0083739"}


id: GO:0120214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of histidine biosynthetic process.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of histidine biosynthetic process","termid":"GO:0120213"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"negatively_regulates","term_name":"L-histidine biosynthetic process","termid":"GO:0000105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of histidine biosynthetic process","synonyms":[{"name":"down regulation of histidine anabolism","type":"exact"},{"name":"down regulation of histidine biosynthesis","type":"exact"},{"name":"down regulation of histidine biosynthetic process","type":"exact"},{"name":"down regulation of histidine formation","type":"exact"},{"name":"down regulation of histidine synthesis","type":"exact"},{"name":"down-regulation of histidine anabolism","type":"exact"},{"name":"down-regulation of histidine biosynthesis","type":"exact"},{"name":"down-regulation of histidine biosynthetic process","type":"exact"},{"name":"down-regulation of histidine formation","type":"exact"},{"name":"down-regulation of histidine synthesis","type":"exact"},{"name":"downregulation of histidine anabolism","type":"exact"},{"name":"downregulation of histidine biosynthesis","type":"exact"},{"name":"downregulation of histidine biosynthetic process","type":"exact"},{"name":"downregulation of histidine formation","type":"exact"},{"name":"downregulation of histidine synthesis","type":"exact"},{"name":"inhibition of histidine anabolism","type":"narrow"},{"name":"inhibition of histidine biosynthesis","type":"narrow"},{"name":"inhibition of histidine biosynthetic process","type":"narrow"},{"name":"inhibition of histidine formation","type":"narrow"},{"name":"inhibition of histidine synthesis","type":"narrow"},{"name":"negative regulation of histidine anabolism","type":"exact"},{"name":"negative regulation of histidine biosynthesis","type":"exact"},{"name":"negative regulation of histidine formation","type":"exact"},{"name":"negative regulation of histidine synthesis","type":"exact"}],"termid":"GO:0120214"}


id: MONDO:0016539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of hypotonia-cystinuria syndrome characterized by mild to moderate intellectual disability in addition to classic hypotonia-cystinuria syndrome phenotype (cystinuria type 1, generalized hypotonia, poor feeding, growth retardation, and minor facial dysmorphism).","definition_xrefs":["Orphanet:238523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotonia-cystinuria syndrome","termid":"MONDO:0011669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"atypical hypotonia-cystinuria syndrome","secondary_identifiers":["UMLS:C4755274","GARD:17175","icd11.foundation:1982772708","MEDGEN:1668791"],"synonyms":[{"name":"atypical HCS","type":"exact"}],"termid":"MONDO:0016539","xrefs":{"Monarch":{"xref_id":"0016539"}}}


id: PBO:0003939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic lysine-tRNA ligase Krs1 (predicted)","termid":"PBO:0003939"}


id: PBO:0001112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA isopentenyltransferase (predicted)","termid":"PBO:0001112"}


id: MONDO:0030067
data:
  {"annotated_genes":["SJAG_03578"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85709],"is_not":false,"summary":null,"term":"MONDO:0030067"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Treacher-Collins syndrome","termid":"MONDO:0002457"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Treacher Collins syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16396","UMLS:C5394546","MEDGEN:1712280","OMIM:618939","DOID:0080792"],"synonyms":[{"name":"TCS4","type":"exact"},{"name":"TREACHER COLLINS SYNDROME 4","type":"exact"},{"name":"Treacher-Collins syndrome 4","type":"exact"},{"name":"treacher collins syndrome 4","type":"exact"}],"termid":"MONDO:0030067","terms_by_termid":{"MONDO:0030067":null},"xrefs":{"Monarch":{"xref_id":"0030067"}}}


id: GO:0000034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenine + H+ + H2O = hypoxanthine + NH4+.","definition_xrefs":["RHEA:23688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"adenine deaminase activity","secondary_identifiers":["MetaCyc:ADENINE-DEAMINASE-RXN","EC:3.5.4.2"],"synonyms":[{"name":"ADase activity","type":"related"},{"name":"adenase activity","type":"related"},{"name":"adenine aminase activity","type":"related"},{"name":"adenine aminohydrolase activity","type":"related"}],"termid":"GO:0000034"}


id: PATO:0001054
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex angle that is inside two adjacent sides of a polygon.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex angle to","termid":"PATO:0001053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal angle","termid":"PATO:0001054"}


id: PATO:0001010
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001010 relative intensity (obsolete PATO:0001010)","termid":"PATO:0001010"}


id: PBO:0040234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 6","termid":"PBO:0040234"}


id: GO:0098516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which high humidity is detected and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of humidity","termid":"GO:0098513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of high humidity","termid":"GO:0098516"}


id: PBO:0026878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_multiseptate_cell,_septa_grouped","termid":"PBO:0026878"}


id: MONDO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition of mild to moderate high blood pressure that has no identifiable cause.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"essential hypertension","termid":"MONDO:0001134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign essential hypertension","secondary_identifiers":["ICD9:401.1","DOID:10913","MEDGEN:56371","SCTID:1201005","UMLS:C0155583"],"synonyms":[{"name":"benign essential hypertension","type":"exact"}],"termid":"MONDO:0001151","xrefs":{"Monarch":{"xref_id":"0001151"}}}


id: GO:0051008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Hsp27 proteins, a lightweight heat shock protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat shock protein binding","termid":"GO:0031072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"Hsp27 protein binding","termid":"GO:0051008"}


id: GO:0061185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of embryonic development","termid":"GO:0045992"},{"relation_name":"is_a","term_name":"regulation of dermatome development","termid":"GO:0061183"},{"relation_name":"negatively_regulates","term_name":"dermatome development","termid":"GO:0061054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dermatome development","termid":"GO:0061185"}


id: MONDO:0008264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic kidney disease that causes progressive loss of kidney function caused by mutations in the genes encoding uromodulin (UMOD), hepatocyte nuclear factor-1β (HNF1B), renin (REN), or mucin-1 (MUC1).","definition_xrefs":["PMID:25738250","GARD:0010801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"familial cystic renal disease","termid":"MONDO:0019741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant medullary cystic kidney disease with or without hyperuricemia","secondary_identifiers":["GARD:10801","Orphanet:34149","icd11.foundation:216863438","MEDGEN:1377523","UMLS:C4511620","SCTID:444699000","MESH:C536137"],"synonyms":[{"name":"ADTKD","type":"exact"},{"name":"MCKD","type":"related"},{"name":"autosomal dominant interstitial kidney disease","type":"exact"},{"name":"autosomal dominant medullary cystic kidney disease","type":"exact"},{"name":"autosomal dominant medullary cystic kidney disease with or without hyperuricemia","type":"exact"},{"name":"autosomal dominant tubulointerstitial kidney disease","type":"related"},{"name":"medullary cystic disease","type":"related"},{"name":"medullary cystic kidney disease","type":"related"},{"name":"polycystic kidneys, medullary type","type":"related"}],"termid":"MONDO:0008264","xrefs":{"Monarch":{"xref_id":"0008264"}}}


