# terms

id: PBO:0063484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDK1 pseudogene 2","termid":"PBO:0063484"}


id: GO:0061483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cysteine sulfanate + GTP + IMP = sulfinylpropanyl adenylate + GDP + 3 H+ + phosphate.","definition_xrefs":["GOC:dph","PMID:8346915"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfinylpropanyl adenylate synthase activity (obsolete GO:0061483)","synonyms":[{"name":"SPA synthase activity","type":"related"}],"termid":"GO:0061483"}


id: PBO:0004984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA Meu3","termid":"PBO:0004984"}


id: GO:0009061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which uses compounds other than oxygen (e.g. nitrate, sulfate) as the terminal electron acceptor.","definition_xrefs":["GOC:das","ISBN:0140513590","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"anaerobic respiration","secondary_identifiers":["Wikipedia:Cellular_respiration#Anaerobic_respiration","MetaCyc:ANAEROBIC-RESPIRATION","Wikipedia:Anaerobic_respiration"],"termid":"GO:0009061"}


id: FYPO:0009103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the recoil distance of the cytokynetic ring after ring ablation is increased with respect to wild type. Experimentally, a localised cut or ablation is typically achieved using a laser. This distance, in combination with the timing of recoil are used to compute effective stiffness and drag of the ring components. See PMID:36980258.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring","termid":"FYPO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0004803","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased actomyosin contractile ring recoil distance after ring ablation","secondary_identifiers":["PMID:36980258"],"synonyms":[{"name":"increased cytokinetic ring recoil distance after laser ablation","type":"broad"}],"termid":"FYPO:0009103"}


id: PBO:0005517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silencing protein Rik1","termid":"PBO:0005517"}


id: PBO:0083909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN-dependent NAD(P)H:quinone oxidoreductase; induced by oxidative stress in a Yap1p dependent manner; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress; PST2 has a paralog, RFS1, that arose from the whole genome duplication","termid":"PBO:0083909"}


id: GO:1902156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to G1 DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to DNA damage checkpoint signaling","termid":"GO:1902154"},{"relation_name":"is_a","term_name":"regulation of response to G1 DNA damage checkpoint signaling","termid":"GO:1902155"},{"relation_name":"positively_regulates","term_name":"response to G1 DNA damage checkpoint signaling","termid":"GO:0072432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to G1 DNA damage checkpoint signaling","synonyms":[{"name":"activation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"activation of response to G1 DNA damage checkpoint signaling","type":"narrow"},{"name":"activation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"activation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"positive regulation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"positive regulation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"positive regulation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"up regulation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"up regulation of response to G1 DNA damage checkpoint signaling","type":"exact"},{"name":"up regulation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"up regulation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"up-regulation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"up-regulation of response to G1 DNA damage checkpoint signaling","type":"exact"},{"name":"up-regulation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"up-regulation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"upregulation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"upregulation of response to G1 DNA damage checkpoint signaling","type":"exact"},{"name":"upregulation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"upregulation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"}],"termid":"GO:1902156"}


id: GO:0006989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete unfolded protein response, ligation of mRNA encoding UFP-specific transcription factor by RNA ligase (obsolete GO:0006989)","synonyms":[{"name":"unfolded protein response, ligation of mRNA encoding UFP-specific transcription factor by RNA ligase","type":"exact"}],"termid":"GO:0006989"}


id: PBO:0031820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_frequency_of_apoptosis","termid":"PBO:0031820"}


id: PBO:0053875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1151","termid":"PBO:0053875"}


id: MONDO:0032649
data:
  {"annotated_genes":["SJAG_00624"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86616],"is_not":false,"summary":null,"term":"MONDO:0032649"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00624":null},"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16335","MEDGEN:1648477","OMIM:618275","DOID:0080582","UMLS:C4748930"],"synonyms":[{"name":"HYPOTRICHOSIS 14","type":"related"},{"name":"HYPT14","type":"related"}],"termid":"MONDO:0032649","terms_by_termid":{"MONDO:0032649":null},"xrefs":{"Monarch":{"xref_id":"0032649"}}}


id: PBO:0047725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 neighbor","termid":"PBO:0047725"}


id: GO:0022031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an astrocyte cell through the telencephalon.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon glial cell migration","termid":"GO:0022030"},{"relation_name":"is_a","term_name":"astrocyte cell migration","termid":"GO:0043615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon astrocyte cell migration","termid":"GO:0022031"}


id: GO:2000976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in detection of glucose.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in detection of glucose (obsolete GO:2000976)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in detection of glucose","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose detection","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose perception","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in detection of glucose","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose detection","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose perception","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose sensing","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in detection of glucose","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose detection","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose perception","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in detection of glucose","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in glucose detection","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in glucose perception","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose detection","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose perception","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in detection of glucose","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose detection","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose perception","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose sensing","type":"related"}],"termid":"GO:2000976"}


id: MONDO:0009980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal telangiectasia and hypogammaglobulinemia","secondary_identifiers":["MEDGEN:419680","UMLS:C2930961","MESH:C535638","OMIM:267900"],"synonyms":[{"name":"Frenkel Russe syndrome","type":"related"},{"name":"retinal telangiectasia and hypogammaglobulinemia","type":"exact"},{"name":"retinal telangiectasia associated with hypogammaglobulinemia","type":"related"}],"termid":"MONDO:0009980","xrefs":{"Monarch":{"xref_id":"0009980"}}}


id: GO:0047524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16-alpha-hydroxysteroid = 16-beta-hydroxysteroid.","definition_xrefs":["RHEA:15829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"16-hydroxysteroid epimerase activity","secondary_identifiers":["EC:5.1.99.2","MetaCyc:16-HYDROXYSTEROID-EPIMERASE-RXN"],"synonyms":[{"name":"16-hydroxysteroid 16-epimerase activity","type":"related"}],"termid":"GO:0047524"}


id: PBO:0080446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and immunoglobulin domain containing 4","termid":"PBO:0080446"}


id: MOD:01379
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 2'-methylsulfonyl-L-tryptophan.","definition_xrefs":["PubMed:6893271","RESID:AA0450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-methylsulfonyl-L-tryptophan","synonyms":[{"name":"2'-methylsulfonyl-L-tryptophan","type":"exact"},{"name":"2-methylsulfonyl-3-((2S)-2-amino-2-carboxyethyl)-1H-indole","type":"exact"},{"name":"MOD_RES 2'-methylsulfonyltryptophan","type":"exact"}],"termid":"MOD:01379"}


id: MONDO:1010743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atopic dermatitis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atopic dermatitis, non-human animal","termid":"MONDO:1010126"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atopic dermatitis, dog","secondary_identifiers":["OMIA:000269-9615"],"termid":"MONDO:1010743","xrefs":{"Monarch":{"xref_id":"1010743"}}}


id: PR:Q9Y7L2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2A9.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7L2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA methyltransferase C2A9.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.10","synonyms":[{"name":"Spom972h-SPBC2A9.10","type":"exact"}],"termid":"PR:Q9Y7L2"}


id: GO:1990133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric protein complex which adenylates two molecules of the sulfur carrier subunit of the molybdopterin cofactor synthase using ATP as part of molybdopterin cofactor (Moco) biosynthesis. In E. coli the subunits are MoeB and MoaD; in human the subunits are MOCS3 and MOCS2A. Moco biosynthesis and its constituent molecules are evolutionarily conserved.","definition_xrefs":["PMID:18491921","PMID:11713534","GOC:bhm","PMID:16669776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase complex","termid":"GO:1902503"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"molybdopterin adenylyltransferase complex","synonyms":[{"name":"MPT adenylyltransferase complex","type":"exact"},{"name":"molybdopterin cofactor (Moco) biosynthesis adenylyltransferase complex","type":"exact"}],"termid":"GO:1990133"}


id: PBO:0038963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenomedullin 2","termid":"PBO:0038963"}


id: PBO:0030557
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_amino_acid_import_during_nitrogen_starvation","termid":"PBO:0030557"}


id: FYPO:0006079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at ribosomal DNA repeat regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at rDNA","termid":"FYPO:0000206"},{"relation_name":"is_a","term_name":"increased chromatin silencing","termid":"FYPO:0004540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased chromatin silencing at rDNA","synonyms":[{"name":"increased chromatin silencing at rDNA during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at rDNA during vegetative growth","type":"exact"},{"name":"increased chromatin silencing at ribosomal DNA","type":"exact"}],"termid":"FYPO:0006079"}


id: GO:0047707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + biotin + CoA = AMP + diphosphate + biotinyl-CoA.","definition_xrefs":["MetaCyc:BIOTIN--COA-LIGASE-RXN","EC:6.2.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"biotin-CoA ligase activity","secondary_identifiers":["RHEA:19681"],"synonyms":[{"name":"biotin CoA synthetase activity","type":"related"},{"name":"biotin:CoA ligase (AMP-forming)","type":"related"},{"name":"biotinyl coenzyme A synthetase activity","type":"related"},{"name":"biotinyl-CoA synthetase activity","type":"related"}],"termid":"GO:0047707"}


id: PBO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased frequency of long tract gene conversion in the rhp57 delta single mutant was suppressed in the swi5delta rhp57delta double mutant, to a level similar to that observed in the rhp51 mutant","termid":"PBO:0001351"}


id: MOD:01655
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 5-dimethylaminonaphthalene-1-sulfonyl chloride, dansyl chloride, to form an alpha-amino-Dansyl-derivatized residue.","definition_xrefs":["Unimod:139#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dansyl chloride derivatized residue","termid":"MOD:01653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino-Dansyl derivatized residue","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"},{"name":"N2DansylRes","type":"exact"}],"termid":"MOD:01655"}


id: FYPO:0001927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ionizing radiation is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to ionizing radiation","synonyms":[{"name":"normal cell cycle delay following ionizing radiation","type":"exact"},{"name":"normal cell cycle regulation during cellular response to gamma radiation","type":"narrow"},{"name":"normal cell cycle regulation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"normal cell cycle regulation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to ionizing radiation","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0001927"}


id: GO:0050554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-copalyl diphosphate = (-)-abietadiene + diphosphate.","definition_xrefs":["RHEA:13873","EC:4.2.3.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"abietadiene synthase activity","secondary_identifiers":["KEGG_REACTION:R06301","MetaCyc:4.2.3.18-RXN"],"synonyms":[{"name":"(+)-copalyl-diphosphate diphosphate-lyase (cyclizing, (-)-abietadiene-forming)","type":"related"},{"name":"abietadiene cyclase activity","type":"related"},{"name":"copalyl-diphosphate diphosphate-lyase (cyclizing)","type":"related"}],"termid":"GO:0050554"}


id: PBO:0044310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase like","termid":"PBO:0044310"}


id: GO:0047643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-D-mannuronate + alginate(n) = GDP + alginate(n+1).","definition_xrefs":["EC:2.4.1.33","MetaCyc:ALGINATE-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"alginate synthase activity","secondary_identifiers":["RHEA:46876"],"synonyms":[{"name":"GDP-D-mannuronate:alginate D-mannuronyltransferase activity","type":"related"},{"name":"mannuronosyl transferase activity","type":"related"}],"termid":"GO:0047643"}


id: MONDO:0010162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tyrosinemia type 3 is an inborn error of tyrosine metabolism characterized by mild hypertyrosinemia and increased urinary excretion of 4-hydroxyphenylpyruvate, 4-hydroxyphenyllactate and 4-hydroxyphenylacetate.","definition_xrefs":["Orphanet:69723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosinemia","termid":"MONDO:0004741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"tyrosinemia type III","secondary_identifiers":["UMLS:C0268623","SCTID:415764005","DOID:0050727","NANDO:2200470","MedDRA:10069461","NANDO:1200790","OMIM:276710","ICD9:270.2","GARD:10332","MEDGEN:78694"],"synonyms":[{"name":"4-Hydroxyphenylpyruvate dioxygenase deficiency","type":"related"},{"name":"4-Hydroxyphenylpyruvic acid oxidase deficiency","type":"related"},{"name":"4-alpha hydroxyphenylpyruvate dioxygenase deficiency","type":"related"},{"name":"4-alpha hydroxyphenylpyruvic acid oxidase deficiency","type":"related"},{"name":"TYRSN3","type":"related"},{"name":"tyrosinemia due to 4-hydroxyphenylpyruvate dioxygenase deficiency","type":"exact"},{"name":"tyrosinemia due to 4-hydroxyphenylpyruvic acid oxidase deficiency","type":"exact"},{"name":"tyrosinemia due to HPD deficiency","type":"exact"},{"name":"tyrosinemia type 3","type":"related"},{"name":"tyrosinemia type III","type":"exact"},{"name":"tyrosinemia, type 3","type":"related"},{"name":"tyrosinemia, type III","type":"related"}],"termid":"MONDO:0010162","xrefs":{"Monarch":{"xref_id":"0010162"}}}


id: FYPO:0006439
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the level of X-shaped DNA replication intermediates is greater than normal. X-shaped intermediates may be formed by replication forks moving bidirectionally from outside the region, or by the increased formation or persistence of Holliday junctions or similar recombination intermediates.","definition_xrefs":["PomBase:mah","PMID:23071723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of X-shaped replication intermediates","synonyms":[{"name":"abnormal proportion of X-shaped replication intermediates","type":"related"},{"name":"increased level of X-shaped DNA replication intermediates","type":"exact"},{"name":"increased level of X-shaped replication intermediates during mitotic cell cycle","type":"related"},{"name":"increased level of X-shaped replication intermediates during vegetative growth","type":"exact"}],"termid":"FYPO:0006439"}


id: PR:O42910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 7, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.03c","synonyms":[{"name":"Spom972h-ppr7","type":"exact"}],"termid":"PR:O42910"}


id: FYPO:0004792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is smaller than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PMID:22959349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased telomere-nuclear envelope distance during mitotic G2 phase","synonyms":[{"name":"decreased distance between telomeres and nuclear envelope during mitotic G2 phase","type":"exact"},{"name":"decreased telomere-nuclear envelope distance during G2 phase during mitotic cell cycle","type":"related"},{"name":"decreased telomere-nuclear envelope distance during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"reduced telomere-nuclear envelope distance during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0004792"}


id: GO:0160001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling that starts with the activation of extrasynaptic GABA receptors in neurons through binding of ambient gamma-aminobutyric acid present in the extracellular fluid.","definition_xrefs":["PMID:23038269","PMID:9364051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-aminobutyric acid signaling pathway","termid":"GO:0007214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"extrasynaptic signaling via GABA","termid":"GO:0160001"}


id: PBO:0059918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 4","termid":"PBO:0059918"}


id: MOD:01555
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01555"}


id: GO:0015096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete manganese resistance permease activity (obsolete GO:0015096)","synonyms":[{"name":"manganese resistance permease activity","type":"exact"}],"termid":"GO:0015096"}


id: GO:0004836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tyramine + L-ascorbate + O2 = (R)-octopamine + L-dehydroascorbate + H2O.","definition_xrefs":["PMID:10745161","RHEA:57132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen","termid":"GO:0016715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tyramine-beta hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14645"],"termid":"GO:0004836"}


id: PBO:0027781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_dephosphorylation","termid":"PBO:0027781"}


id: GO:1900375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of inositol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:go_curators","PMID:2004420"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900375)","synonyms":[{"name":"activation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900375"}


id: PBO:0069146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 397, pseudogene","termid":"PBO:0069146"}


id: PBO:0083978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosidase II catalytic subunit; required to trim the final glucose in N-linked glycans; required for normal cell wall synthesis; mutations in rot2 suppress tor2 mutations, and are synthetically lethal with rot1 mutations","termid":"PBO:0083978"}


id: MONDO:0001774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"posterior scleritis","secondary_identifiers":["ICD9:379.07","DOID:13676","SCTID:267660007","icd11.foundation:982348440","UMLS:C0155357","MEDGEN:509932"],"termid":"MONDO:0001774","xrefs":{"Monarch":{"xref_id":"0001774"}}}


id: MONDO:0032703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature, amelogenesis imperfecta, and skeletal dysplasia with scoliosis","secondary_identifiers":["MEDGEN:1676818","UMLS:C5193055","OMIM:618363"],"synonyms":[{"name":"SHORT STATURE, AMELOGENESIS IMPERFECTA, AND SKELETAL DYSPLASIA WITH SCOLIOSIS","type":"related"},{"name":"SSASKS","type":"related"}],"termid":"MONDO:0032703","xrefs":{"Monarch":{"xref_id":"0032703"}}}


id: GO:0039688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA replication process that uses viral RNA as a template for RNA-dependent DNA polymerases (e.g. reverse transcriptase) that synthesize the new strands.","definition_xrefs":["GOC:bf","GOC:jl","VZ:1938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome replication","termid":"GO:0039693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"viral double stranded DNA replication via reverse transcription","synonyms":[{"name":"RNA-dependent viral DNA replication","type":"related"},{"name":"dsDNA replication via RNA intermediate","type":"exact"},{"name":"viral RNA-dependent DNA replication","type":"exact"}],"termid":"GO:0039688"}


id: PBO:0029854
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_and_H3-K14_acetylation_at_centromere_outer_repeat","termid":"PBO:0029854"}


id: PBO:0046765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 5","termid":"PBO:0046765"}


id: GO:0008285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell population proliferation","synonyms":[{"name":"down regulation of cell proliferation","type":"exact"},{"name":"down-regulation of cell proliferation","type":"exact"},{"name":"downregulation of cell proliferation","type":"exact"},{"name":"inhibition of cell proliferation","type":"narrow"},{"name":"negative regulation of cell proliferation","type":"related"}],"termid":"GO:0008285"}


id: GO:0006294
data:
  {"annotated_genes":["SJAG_01207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109290],"is_not":false,"summary":null,"term":"GO:0006294"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins on DNA to form the multiprotein complex involved in damage recognition, DNA helix unwinding, and endonucleolytic cleavage at the site of DNA damage. This assembly occurs before the phosphodiester backbone of the damaged strand is cleaved 3' and 5' of the site of DNA damage.","definition_xrefs":["GOC:elh","PMID:10197977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"nucleotide-excision repair, preincision complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleotide-excision repair, preincision complex formation","type":"exact"}],"termid":"GO:0006294","terms_by_termid":{"GO:0006294":null}}


id: RO:HOM0000073
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Synology that results from allopolyploidy.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_ohnology_relationship_with","termid":"RO:HOM0000022"},{"relation_name":"is_a","term_name":"in_synology_relationship_with","termid":"RO:HOM0000053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homoeology_relationship_with","synonyms":[{"name":"homoeologous to","type":"exact"}],"termid":"RO:HOM0000073"}


id: FYPO:0000366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of RNA localization is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA localization during vegetative growth","termid":"FYPO:0000360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA localization","synonyms":[{"name":"RNA localization: decreased","type":"related"},{"name":"decreased RNA localisation","type":"exact"},{"name":"decreased RNA localization during mitotic cell cycle","type":"related"},{"name":"decreased RNA localization during vegetative growth","type":"exact"},{"name":"reduced RNA localization","type":"exact"}],"termid":"FYPO:0000366"}


id: PBO:0085657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in modulation of Ime2p activity during meiosis; appears to act indirectly to promote Ime2p-mediated late meiotic functions; found in growing cells and degraded during sporulation","termid":"PBO:0085657"}


id: PR:O74359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC28E12.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 60 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.02","synonyms":[{"name":"Spom972h-SPBC28E12.02","type":"exact"}],"termid":"PR:O74359"}


id: FYPO:0004425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of threonine residues in one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein threonine phosphorylation (obsolete FYPO:0004425)","synonyms":[{"name":"abolished peptidyl-threonine phosphorylation","type":"exact"},{"name":"protein threonine phosphorylation abolished","type":"exact"}],"termid":"FYPO:0004425"}


id: FYPO:0006404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the spindle pole body is broken into fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology","termid":"FYPO:0004607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"fragmented spindle pole body","synonyms":[{"name":"fragmented SPB","type":"exact"},{"name":"spindle pole body fragmentation","type":"exact"}],"termid":"FYPO:0006404"}


id: MONDO:0032663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 70","secondary_identifiers":["UMLS:C4749023","GARD:16336","OMIM:618298","DOID:0112206","MEDGEN:1648407"],"synonyms":[{"name":"DEE70","type":"exact"},{"name":"EIEE70","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 70","type":"exact"},{"name":"developmental and epileptic encephalopathy 70","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 70","type":"exact"}],"termid":"MONDO:0032663","xrefs":{"Monarch":{"xref_id":"0032663"}}}


id: GO:0050158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + NADP+ = H+ + NADPH + orotate.","definition_xrefs":["RHEA:14861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroorotate dehydrogenase activity","termid":"GO:0004152"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:OROTATE-REDUCTASE-NADPH-RXN","EC:1.3.1.15","KEGG_REACTION:R01866"],"synonyms":[{"name":"(S)-dihydroorotate:NADP+ oxidoreductase activity","type":"related"},{"name":"L-5,6-dihydro-orotate:NAD oxidoreductase activity","type":"related"},{"name":"dihydro-orotic dehydrogenase activity","type":"related"},{"name":"orotate reductase (NADPH) activity","type":"exact"},{"name":"orotate reductase activity","type":"related"}],"termid":"GO:0050158"}


id: GO:0015174
data:
  {"annotated_genes":["SJAG_02029","SJAG_04787","SJAG_00051","SJAG_04637","SJAG_00877","SJAG_04725","SJAG_03400","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90739,94932,96033],"is_not":false,"summary":null,"term":"GO:0015174"},{"annotations":[79473,100681,97684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[97685,79466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[79470,110337,100682,103118,97686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"}]},"cv_name":"molecular_function","definition":"Enables the transfer of basic amino acids from one side of a membrane to the other. Basic amino acids have side chains with a positive charge at pH 7.3.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null,"SJAG_04725":null,"SJAG_04787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"basic amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015326","Reactome:R-HSA-8932851","Reactome:R-HSA-8959781","GO:0005286"],"synonyms":[{"name":"basic amino acid permease activity","type":"exact"},{"name":"basic amino acid transporter activity","type":"broad"},{"name":"cationic amino acid transmembrane transporter activity","type":"related"}],"termid":"GO:0015174","terms_by_termid":{"GO:0005290":null,"GO:0015174":null,"GO:0015189":null,"GO:0061459":null}}


id: MONDO:0020411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"aorto-ventricular tunnel","termid":"MONDO:0018082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aorto-left ventricular tunnel","secondary_identifiers":["Orphanet:99071","MEDGEN:576719","GARD:19633","icd11.foundation:1781288740","UMLS:C0345054"],"termid":"MONDO:0020411","xrefs":{"Monarch":{"xref_id":"0020411"}}}


id: PBO:0028982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_mitotic_spindle_elongation","termid":"PBO:0028982"}


id: PBO:0056806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 3","termid":"PBO:0056806"}


id: PBO:0055698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLGL scribble cell polarity complex component 1","termid":"PBO:0055698"}


id: PBO:0027599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thin,_incomplete_secondary_cell_septum","termid":"PBO:0027599"}


id: MONDO:0009729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephropathy-deafness-hyperparathyroidism syndrome is characterized by renal failure without haematuria, parathyroid hyperplasia and sensorineural deafness. It has been described in five children born to consanguineous patents. The mode of inheritance appears to be autosomal recessive.","definition_xrefs":["Orphanet:2668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephropathy - deafness - hyperparathyroidism syndrome","secondary_identifiers":["UMLS:C1850553","MEDGEN:340569","GARD:3940","MESH:C536401","OMIM:256120","SCTID:724093004"],"synonyms":[{"name":"Edwards Patton Dilly syndrome","type":"related"},{"name":"Edwards-Patton-Dilly syndrome","type":"exact"},{"name":"nephropathy - deafness - hyperparathyroidism","type":"related"},{"name":"nephropathy, deafness, and hyperparathyroidism","type":"related"}],"termid":"MONDO:0009729","xrefs":{"Monarch":{"xref_id":"0009729"}}}


id: MONDO:0015053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary angioedema type 1 (HAE 1) is a form of hereditary angioedema characterized by acute edema in subcutaneous tissues, viscera and/or the upper airway.","definition_xrefs":["Orphanet:100050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema with C1Inh deficiency","termid":"MONDO:0033946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary angioedema type 1","secondary_identifiers":["ICD9:279.8","MEDGEN:403466","SCTID:234619000","UMLS:C2717906","GARD:16933"],"synonyms":[{"name":"HAE 1","type":"exact"},{"name":"HAE-I","type":"exact"},{"name":"hereditary angioneurotic edema type 1","type":"exact"},{"name":"hereditary angioneurotic oedema type 1","type":"exact"}],"termid":"MONDO:0015053","xrefs":{"Monarch":{"xref_id":"0015053"}}}


id: PBO:0046083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 8","termid":"PBO:0046083"}


id: PBO:0073217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 5B","termid":"PBO:0073217"}


id: MONDO:0005277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common, severe type of vascular headache often associated with increased sympathetic activity, resulting in nausea, vomiting, and light sensitivity.","definition_xrefs":["NCIT:C89715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"hypnic headache","termid":"MONDO:0017181"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine disorder","secondary_identifiers":["ICD9:346","DOID:6364","MEDGEN:57451","MESH:D008881","ICD9:346.9","UMLS:C0149931"],"synonyms":[{"name":"migraine","type":"exact"},{"name":"migraine disorder","type":"exact"},{"name":"migraine headache","type":"exact"},{"name":"migraine variant","type":"exact"},{"name":"migraine with or without aura","type":"exact"}],"termid":"MONDO:0005277","xrefs":{"Monarch":{"xref_id":"0005277"}}}


id: PBO:0041676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CADM2 antisense RNA 2","termid":"PBO:0041676"}


id: GO:0031466
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul5 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an elongin-BC adaptor and a SOCS/BC box protein.","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul5-RING ubiquitin ligase complex","synonyms":[{"name":"CDL5 complex","type":"exact"},{"name":"CRL5 complex","type":"exact"},{"name":"EC2S complex","type":"broad"},{"name":"SCF5 complex","type":"related"},{"name":"cullin-RING ligase 5","type":"exact"}],"termid":"GO:0031466"}


id: GO:0031930
data:
  {"annotated_genes":["SJAG_03319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70921],"is_not":false,"summary":null,"term":"GO:0031930"}]},"cv_name":"biological_process","definition":"The series of molecular signals that forms a pathway of communication from the mitochondria to the nucleus and initiates cellular changes in response to changes in mitochondrial function.","definition_xrefs":["PMID:15068799","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mitochondria-nucleus signaling pathway","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"mitochondria-nucleus signal transduction","type":"exact"},{"name":"mitochondrial signaling pathway","type":"exact"},{"name":"mitochondrial signalling pathway","type":"exact"},{"name":"retrograde response","type":"exact"}],"termid":"GO:0031930","terms_by_termid":{"GO:0031930":null}}


id: PBO:0049178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GREB1 like retinoic acid receptor coactivator","termid":"PBO:0049178"}


id: PBO:0073573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHISA5 pseudogene 1","termid":"PBO:0073573"}


id: PBO:0002806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, poly(A) bearing (predicted)","termid":"PBO:0002806"}


id: MONDO:0032785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postaxial polydactyly","termid":"MONDO:0020927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, postaxial, type a10","secondary_identifiers":["GARD:18178","OMIM:618498","MEDGEN:1676955","UMLS:C5193129"],"synonyms":[{"name":"PAPA10","type":"related"},{"name":"POLYDACTYLY, POSTAXIAL, TYPE A10","type":"related"}],"termid":"MONDO:0032785","xrefs":{"Monarch":{"xref_id":"0032785"}}}


id: GO:0061295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the mesonephros.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072039"},{"relation_name":"regulates","term_name":"mesenchymal stem cell maintenance involved in mesonephric nephron morphogenesis","termid":"GO:0061235"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:1901146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","synonyms":[{"name":"regulation of mesenchymal stem cell apoptosis involved in mesonephric nephron morphogenesis","type":"narrow"},{"name":"regulation of mesenchymal stem cell apoptotic process involved in mesonephric nephron morphogenesis","type":"exact"}],"termid":"GO:0061295"}


id: MONDO:0017154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arterial hypertension associated with portal hypertension (PAH-PH) is a form of pulmonary arterial hypertension (PAH), characterized by an elevated pulmonary arterial resistance leading to right heart failure observed as a complication of portal hypertension.","definition_xrefs":["Orphanet:275813"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arterial hypertension associated with portal hypertension (obsolete MONDO:0017154)","secondary_identifiers":["SCTID:445237003"],"synonyms":[{"name":"PAH associated with portal hypertension","type":"exact"},{"name":"POPH","type":"exact"},{"name":"Portopulmonary hypertension","type":"exact"}],"termid":"MONDO:0017154","xrefs":{"Monarch":{"xref_id":"0017154"}}}


id: PBO:0080388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS16 core subunit of CORVET and HOPS complexes","termid":"PBO:0080388"}


id: PBO:0091280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-FO ATP synthase chaperone Atp10","termid":"PBO:0091280"}


id: PBO:0078390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-5","termid":"PBO:0078390"}


id: PBO:0054274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1664","termid":"PBO:0054274"}


id: PBO:0067391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 496, pseudogene","termid":"PBO:0067391"}


id: PBO:0000522
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.-","termid":"PBO:0000522"}


id: PBO:0051790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing G","termid":"PBO:0051790"}


id: GO:0044784
data:
  {"annotated_genes":["SJAG_01082","SJAG_03681","SJAG_00145","SJAG_04968","SJAG_02451","SJAG_03327","SJAG_04884","SJAG_00666","SJAG_01837","SJAG_00883","SJAG_02336","SJAG_05329","SJAG_01956","SJAG_04853","SJAG_01297","SJAG_03048","SJAG_01330","SJAG_03575","SJAG_04259","SJAG_03353","SJAG_04999","SJAG_02498","SJAG_01805","SJAG_04126","SJAG_04699","SJAG_03126","SJAG_04573","SJAG_02380","SJAG_01679","SJAG_02169","SJAG_01515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116202,114086,107544,112268,91063,99912,114574,104208,108563],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[114801,106634],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[116969,75747],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[100459,99016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[102604,100460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[78750,73404,71077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007091"},{"annotations":[114804,102113,110213,115859,99756,106636],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[99017],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[94538],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[114091],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[95495],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[116976],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[98022,115073,94146,102424,102695,100461,111683],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[101655],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid segregation","termid":"GO:0033045"},{"relation_name":"is_a","term_name":"cell cycle phase transition","termid":"GO:0044770"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01956":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03575":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04853":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"metaphase/anaphase transition of cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044784","terms_by_termid":{"GO:0007091":null,"GO:0007094":null,"GO:0033316":null,"GO:0045842":null,"GO:0090267":null,"GO:0140499":null,"GO:1902103":null,"GO:1902426":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990949":null,"GO:1990950":null}}


id: MONDO:1012373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"retinal dysplasia and degeneration, non-human animal","termid":"MONDO:1011988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dysplasia and degeneration, chicken","secondary_identifiers":["OMIA:001366-9031"],"termid":"MONDO:1012373","xrefs":{"Monarch":{"xref_id":"1012373"}}}


id: PBO:0072017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 4","termid":"PBO:0072017"}


id: PBO:0001044
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-BoX protein","termid":"PBO:0001044"}


id: MOD:00493
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a formyl group.","definition_xrefs":["Unimod:122","DeltaMass:0","PubMed:15799070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formylated residue","synonyms":[{"name":"FoRes","type":"exact"},{"name":"Formyl","type":"related"},{"name":"Formylation","type":"related"},{"name":"Formylation (CHO)","type":"exact"}],"termid":"MOD:00493"}


id: PR:Q10138
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csr102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C3H8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.02","synonyms":[{"name":"Spom972h-csr102","type":"exact"}],"termid":"PR:Q10138"}


id: PBO:0004182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"18S rRNA dimethylase (predicted)","termid":"PBO:0004182"}


id: PR:Q9USS9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dni2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USS9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed minus-nitrogen induction protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.01","synonyms":[{"name":"Spom972h-dni2","type":"exact"}],"termid":"PR:Q9USS9"}


id: PBO:0002143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof8","termid":"PBO:0002143"}


id: PBO:0066780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 78","termid":"PBO:0066780"}


id: PBO:0030465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_gross_chromosomal_rearrangement","termid":"PBO:0030465"}


id: FYPO:0007203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at an rDNA spacer replication fork barrier by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:18794373","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased rDNA spacer replication fork barrier binding","synonyms":[{"name":"decreased DNA binding at rDNA spacer replication fork barrier","type":"exact"},{"name":"reduced rDNA spacer replication fork barrier binding","type":"exact"}],"termid":"FYPO:0007203"}


id: MONDO:0015632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"FASTKD2-related infantile mitochondrial encephalomyopathy","secondary_identifiers":["icd11.foundation:356231901","GARD:17026","Orphanet:166105","MEDGEN:1665220","UMLS:C4755278"],"termid":"MONDO:0015632","xrefs":{"Monarch":{"xref_id":"0015632"}}}


id: SOFP:status
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Annotation workflow status","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"status","termid":"SOFP:status"}


id: MONDO:0020813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing sex cord-stromal tumor that arises from the testis. Morphologically, it is characterized by the presence of Sertoli cells forming tubules. Leydig cells are rare or absent.","definition_xrefs":["NCIT:C6522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular sertoli cell tumor","termid":"MONDO:0020808"},{"relation_name":"is_a","term_name":"benign sertoli cell tumor","termid":"MONDO:0020809"},{"relation_name":"is_a","term_name":"benign neoplasm of testis","termid":"MONDO:0021447"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign testicular sertoli cell tumor","secondary_identifiers":["MEDGEN:231945","UMLS:C1332540"],"synonyms":[{"name":"benign sertoli cell neoplasm of testis","type":"exact"},{"name":"benign sertoli cell neoplasm of the testis","type":"exact"},{"name":"benign sertoli cell tumor of testis","type":"exact"},{"name":"benign sertoli cell tumor of the testis","type":"exact"},{"name":"benign sertoli cell tumour of testis","type":"exact"},{"name":"benign sertoli cell tumour of the testis","type":"exact"},{"name":"benign testicular sertoli cell neoplasm","type":"exact"},{"name":"benign testicular sertoli cell tumor","type":"exact"}],"termid":"MONDO:0020813","xrefs":{"Monarch":{"xref_id":"0020813"}}}


id: PBO:0029119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate_cell_with_increased_DNA_content_during_stationary_phase","termid":"PBO:0029119"}


id: PBO:0013796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminolevulinate synthase Hem1 (predicted)","termid":"PBO:0013796"}


id: PBO:0045052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in lymphocytic leukemia 1","termid":"PBO:0045052"}


id: FYPO:0000201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone deacetylation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during vegetative growth","termid":"FYPO:0000330"},{"relation_name":"is_a","term_name":"abnormal protein deacetylation during vegetative growth","termid":"FYPO:0004485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone deacetylation during vegetative growth","synonyms":[{"name":"abnormal histone deacetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000201"}


id: PBO:0035813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-eMTOC_absent_from_cell","termid":"PBO:0035813"}


id: FYPO:0003134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in the cell wall is greater than normal during a cellular response to calcium starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell wall alpha-glucan level","termid":"FYPO:0001084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002946"],"is_obsolete":false,"name":"increased cell wall alpha-glucan level during cellular response to calcium starvation","synonyms":[{"name":"increased cell wall alpha-D-glucan level during cellular response to calcium starvation","type":"exact"},{"name":"increased cell wall alpha-glucan accumulation during cellular response to calcium starvation","type":"related"},{"name":"increased cell wall alpha-glucan level during cellular response to calcium starvation during mitotic cell cycle","type":"related"},{"name":"increased cell wall alpha-glucan level during cellular response to calcium starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0003134"}


id: GO:1901735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (R)-mevalonic acid.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(R)-mevalonic acid metabolic process","synonyms":[{"name":"(R) mevalonate metabolism","type":"exact"},{"name":"(R)-mevalonic acid metabolism","type":"exact"}],"termid":"GO:1901735"}


id: MONDO:0009356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive form of humeroradial synostosis (disease).","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"humeroradial synostosis","termid":"MONDO:0007737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"autosomal recessive humeroradial synostosis","secondary_identifiers":["OMIM:236400","MEDGEN:343467","UMLS:C1856055"],"synonyms":[{"name":"autosomal recessive humeroradial synostosis (disease)","type":"exact"},{"name":"humeroradial synostosis","type":"related"},{"name":"humeroradial synostosis (disease), autosomal recessive","type":"exact"},{"name":"humeroradial/multiple synostosis syndrome","type":"related"}],"termid":"MONDO:0009356","xrefs":{"Monarch":{"xref_id":"0009356"}}}


id: MONDO:0014898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive progressive external ophthalmoplegia in which the cause of the disease is a mutation in the TK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"},{"relation_name":"is_a","term_name":"autosomal recessive progressive external ophthalmoplegia","termid":"MONDO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005066","MONDO:0004069","MONDO:0006025","MONDO:0005336"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 3","secondary_identifiers":["DOID:0111523","GARD:16183","MEDGEN:934701","OMIM:617069","UMLS:C4310734"],"synonyms":[{"name":"PEOB3","type":"exact"},{"name":"TK2 autosomal recessive progressive external ophthalmoplegia","type":"exact"},{"name":"autosomal recessive progressive external ophthalmoplegia caused by mutation in TK2","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 3","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 3; PEOB3","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive type 3","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal recessive 3","type":"related"}],"termid":"MONDO:0014898","xrefs":{"Monarch":{"xref_id":"0014898"}}}


id: FYPO:0002643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing clotrimazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on clotrimazole","synonyms":[{"name":"normal cell population growth in presence of clotrimazole","type":"exact"},{"name":"normal cell population growth on clotrimazole","type":"exact"},{"name":"normal cellular response to clotrimazole","type":"related"},{"name":"normal vegetative cell population growth on clotrimazole","type":"exact"}],"termid":"FYPO:0002643"}


id: GO:0061760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An defense response against a fungus mediated through an innate immune response. An innate immune response is mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:dph","PMID:22470487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antifungal innate immune response","termid":"GO:0061760"}


id: GO:0048872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of cells within a population of cells.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"homeostasis of number of cells","synonyms":[{"name":"cell population homeostasis","type":"exact"},{"name":"homeostasis of cell number","type":"exact"}],"termid":"GO:0048872"}


id: PBO:0002672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome component Ecm29","termid":"PBO:0002672"}


id: PBO:0086018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086018"}


id: MONDO:0030535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 2d, generalized, intermediate or severe, autosomal recessive","secondary_identifiers":["MEDGEN:1794224","OMIM:619599","UMLS:C5562014"],"synonyms":[{"name":"EBS2D","type":"exact"}],"termid":"MONDO:0030535","xrefs":{"Monarch":{"xref_id":"0030535"}}}


id: PBO:0064252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A1","termid":"PBO:0064252"}


id: PBO:0031852
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enlarged_nucleus_during_vegetative_growth","termid":"PBO:0031852"}


id: MONDO:0014745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the COL13A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 19","secondary_identifiers":["DOID:0110673","OMIM:616720","UMLS:C4225235","GARD:16153","MEDGEN:897962"],"synonyms":[{"name":"CMS19","type":"exact"},{"name":"COL13A1 congenital myasthenic syndrome","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in COL13A1","type":"exact"},{"name":"congenital myasthenic syndrome type 19","type":"exact"},{"name":"myasthenic syndrome, congenital, 19","type":"exact"},{"name":"myasthenic syndrome, congenital, type 19","type":"exact"}],"termid":"MONDO:0014745","xrefs":{"Monarch":{"xref_id":"0014745"}}}


id: GO:0052872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tocotrienol + O2 + NADPH + H+ = 13'-hydroxy-tocotrienol + NADP+ + H2O .","definition_xrefs":["MetaCyc:RXN-11003"],"gene_count":0,"genotype_count":0,"name":"obsolete tocotrienol omega-hydroxylase activity (obsolete GO:0052872)","synonyms":[{"name":"tocotrienol 13-hydroxylase activity","type":"exact"}],"termid":"GO:0052872"}


id: GO:1904450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aspartate secretion.","definition_xrefs":["PMID:2342602","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"is_a","term_name":"regulation of aspartate secretion","termid":"GO:1904448"},{"relation_name":"positively_regulates","term_name":"aspartate secretion","termid":"GO:0061528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of aspartate secretion","synonyms":[{"name":"activation of aspartate secretion","type":"narrow"},{"name":"up regulation of aspartate secretion","type":"exact"},{"name":"up-regulation of aspartate secretion","type":"exact"},{"name":"upregulation of aspartate secretion","type":"exact"}],"termid":"GO:1904450"}


id: GO:0005081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor signaling protein serine/threonine phosphatase signaling protein activity (obsolete GO:0005081)","synonyms":[{"name":"receptor signaling protein serine/threonine phosphatase signaling protein activity","type":"exact"},{"name":"receptor signalling protein serine/threonine phosphatase signalling protein activity","type":"exact"}],"termid":"GO:0005081"}


id: PBO:0041540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 98","termid":"PBO:0041540"}


id: PR:Q2HQL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1347.14c gene.","definition_xrefs":["UniProtKB:Q2HQL6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1347.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.14c","synonyms":[{"name":"Spom972h-SPBC1347.14c","type":"exact"}],"termid":"PR:Q2HQL6"}


id: GO:1903297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hypoxia-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to hypoxia","termid":"GO:1990144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of hypoxia-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of hypoxia-induced apoptosis","type":"related"},{"name":"regulation of hypoxic stress-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"}],"termid":"GO:1903297"}


id: PBO:0081059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 17","termid":"PBO:0081059"}


id: MONDO:0007080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial hyperaldosteronism type I (FH-I) is a rare heritable, glucocorticoid remediable form of primary aldosteronism (PA) characterized by early-onset hypertension, hyperaldosteronism, variable hypokalemia, low plasma renin activity (PRA), and abnormal production of 18-oxocortisol and 18-hydroxycortisol.","definition_xrefs":["Orphanet:403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperaldosteronism","termid":"MONDO:0016525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid-remediable aldosteronism","secondary_identifiers":["GARD:2790","MESH:C563177","UMLS:C3838731","OMIM:103900","MEDGEN:824577","ICD9:255.11","DOID:14080","ICD10CM:E26.02"],"synonyms":[{"name":"ACTH-dependent hyperaldosteronism syndrome","type":"related"},{"name":"FH 1","type":"related"},{"name":"FH-I","type":"exact"},{"name":"FH1","type":"exact"},{"name":"GRA","type":"exact"},{"name":"HALD1","type":"related"},{"name":"aldosteronism, glucocorticoid-remediable","type":"exact"},{"name":"aldosteronism, sensitive to dexamethasone","type":"related"},{"name":"dexamethasone sensitive hypertension","type":"related"},{"name":"dexamethasone-sensitive hypertension","type":"exact"},{"name":"familial hyperaldosteronism type 1","type":"exact"},{"name":"familial hyperaldosteronism type I","type":"related"},{"name":"glucocorticoid sensitive hypertension","type":"related"},{"name":"glucocorticoid-remediable aldosteronism","type":"exact"},{"name":"glucocorticoid-sensitive hypertension","type":"exact"},{"name":"glucocorticoid-suppressible hyperaldosteronism","type":"related"},{"name":"hyperaldosteronism, familial type 1","type":"related"},{"name":"hyperaldosteronism, familial, type 1","type":"related"},{"name":"hyperaldosteronism, familial, type I","type":"related"}],"termid":"MONDO:0007080","xrefs":{"Monarch":{"xref_id":"0007080"}}}


id: GO:0008121
data:
  {"annotated_genes":["SJAG_03490","SJAG_07006","SJAG_01490","SJAG_02646","SJAG_00601","SJAG_00755","SJAG_MIT03"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64168,104393,108272,113710,117989,118468,119358],"is_not":false,"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c + 2 H+.","definition_xrefs":["RHEA:11484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_00755":null,"SJAG_01490":null,"SJAG_02646":null,"SJAG_03490":null,"SJAG_07006":null,"SJAG_MIT03":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003824","GO:0005215","GO:0003674","GO:0016491","GO:0022857"],"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-164651","GO:0045153","EC:7.1.1.8","GO:0045154","MetaCyc:RXN-15816"],"synonyms":[{"name":"complex III (mitochondrial electron transport) activity","type":"narrow"},{"name":"cytochrome","type":"broad"},{"name":"cytochrome a","type":"narrow"},{"name":"cytochrome a3/copper complex","type":"narrow"},{"name":"cytochrome b562","type":"narrow"},{"name":"cytochrome b566","type":"narrow"},{"name":"cytochrome c1","type":"narrow"},{"name":"electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity","type":"related"},{"name":"electron transporter, transferring electrons within cytochrome c oxidase complex activity","type":"related"},{"name":"mitochondrial electron transport complex III","type":"related"},{"name":"soluble cytochrome b562","type":"narrow"},{"name":"ubiquinol-cytochrome c oxidoreductase activity","type":"related"},{"name":"ubiquinol-cytochrome c-2 oxidoreductase activity","type":"related"},{"name":"ubiquinol-cytochrome c1 oxidoreductase activity","type":"related"},{"name":"ubiquinol-cytochrome c2 reductase activity","type":"related"},{"name":"ubiquinol:ferricytochrome-c oxidoreductase activity","type":"related"},{"name":"ubiquinone--cytochrome-c oxidoreductase activity","type":"related"},{"name":"ubiquinone-cytochrome c oxidoreductase activity","type":"related"},{"name":"ubiquinone-cytochrome c reductase activity","type":"related"}],"termid":"GO:0008121","terms_by_termid":{"GO:0008121":null}}


id: PBO:0088355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp21","termid":"PBO:0088355"}


id: PBO:0068601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 52, pseudogene","termid":"PBO:0068601"}


id: PBO:0061155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide nucleotide adenylyltransferase 3","termid":"PBO:0061155"}


id: FYECO:0000272
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[119399,119411],"is_not":false,"summary":null,"term":"FYECO:0000272"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with no nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"glucose MM, no nitrogen","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta"],"termid":"FYECO:0000272","terms_by_termid":{"FYECO:0000272":null,"FYPO_EXT:0000001":null}}


id: PBO:0039570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 65","termid":"PBO:0039570"}


id: GO:0035776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the pronephric proximal tubule over time, from its formation to the mature structure. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10","PMID:18787069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule development","termid":"GO:0039020"},{"relation_name":"is_a","term_name":"proximal tubule development","termid":"GO:0072014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric proximal tubule development","termid":"GO:0035776"}


id: MONDO:0009574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megalencephaly with dysmyelination","secondary_identifiers":["OMIM:249240","MEDGEN:344470","MESH:C565408","UMLS:C1855309"],"synonyms":[{"name":"megalencephaly with diffuse white matter hypodensity","type":"related"},{"name":"megalencephaly with dysmyelination","type":"exact"}],"termid":"MONDO:0009574","xrefs":{"Monarch":{"xref_id":"0009574"}}}


id: PBO:0068028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 333","termid":"PBO:0068028"}


id: MONDO:0006582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, flat, congenital birthmark, with wavy borders and an irregular shape. The color is caused by melanocytes, melanin-containing cells, that are usually located in the surface of the skin (the epidermis), but are in the deeper region (the dermis) in the location of the spot.","definition_xrefs":["Wikipedia:Mongolian_spot"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"mongolian spot","secondary_identifiers":["MEDGEN:75591","MESH:D049328","DOID:4702","NCIT:C3945","UMLS:C0265985","SCTID:40467008"],"synonyms":[{"name":"Mongolian macula","type":"exact"},{"name":"blue sacral spot","type":"exact"},{"name":"congenital dermal melanocytosis","type":"exact"}],"termid":"MONDO:0006582","xrefs":{"Monarch":{"xref_id":"0006582"}}}


id: PBO:0079610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2H divergent transcript","termid":"PBO:0079610"}


id: PBO:0068666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 47, pseudogene","termid":"PBO:0068666"}


id: GO:0003032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an oxygen stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to oxygen levels","termid":"GO:0070482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of oxygen","termid":"GO:0003032"}


id: PBO:0044018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 gamma 2","termid":"PBO:0044018"}


id: FYPO:0002647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during mitosis.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation during mitosis (obsolete FYPO:0002647)","synonyms":[{"name":"decreased peptidyl-threonine phosphorylation during mitosis","type":"exact"},{"name":"decreased protein threonine phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein threonine phosphorylation during mitotic M phase","type":"related"},{"name":"decreased protein threonine phosphorylation during mitotic M phase during mitotic cell cycle","type":"related"},{"name":"decreased threonine phosphorylation during mitosis","type":"exact"},{"name":"reduced protein threonine phosphorylation during mitosis","type":"exact"}],"termid":"FYPO:0002647"}


id: GO:0051947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051941"},{"relation_name":"regulates","term_name":"gamma-aminobutyric acid reuptake","termid":"GO:0051936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","synonyms":[{"name":"regulation of 4-aminobutyrate reuptake","type":"exact"},{"name":"regulation of 4-aminobutyrate uptake during transmission of nerve impulse","type":"exact"},{"name":"regulation of GABA reuptake","type":"exact"},{"name":"regulation of GABA uptake during transmission of nerve impulse","type":"exact"},{"name":"regulation of gamma-aminobutyric acid reuptake","type":"exact"},{"name":"regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"related"},{"name":"regulation of gamma-aminobutyric acid uptake involved in conduction of nerve impulse","type":"exact"}],"termid":"GO:0051947"}


id: PBO:0044843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 130B","termid":"PBO:0044843"}


id: PBO:0044885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 11","termid":"PBO:0044885"}


id: GO:0160249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues, occurring through a UDP-glucose intermediate.","definition_xrefs":["MetaCyc:PWY-5067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen biosynthetic process","termid":"GO:0005978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"glycogen biosynthetic process via UDP-glucose","termid":"GO:0160249"}


id: PBO:0001309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF726 family protein","termid":"PBO:0001309"}


id: MONDO:0005081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Preeclampsia is a hypertensive disorder of pregnancy that is characterized by new-onset hypertension with proteinuria presenting after 20 weeks of gestation, and depending on mild or severe forms may initially present with severe headache, visual disturbances, and hyperreflexia.","definition_xrefs":["Orphanet:275555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"toxemia of pregnancy","termid":"MONDO:0045048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preeclampsia","secondary_identifiers":["GARD:12924","OMIMPS:189800","SCTID:398254007","UMLS:C0032914","ICD9:642.42","NCIT:C85021","ICD9:642.43","ICD9:642.44","ICD9:642.41","EFO:0000668","DOID:10591","MedDRA:10036485","MEDGEN:18608","MESH:D011225","ICD9:642.40"],"synonyms":[{"name":"gestational hypertension","type":"exact"},{"name":"hypertension induced by pregnancy","type":"exact"},{"name":"pre-eclampsia","type":"exact"},{"name":"pre-eclamptic toxaemia","type":"exact"},{"name":"pre-eclamptic toxemia","type":"exact"},{"name":"preeclampsia","type":"exact"},{"name":"preeclampsia/eclampsia","type":"exact"},{"name":"pregnancy associated hypertension","type":"exact"},{"name":"pregnancy toxaemia","type":"exact"},{"name":"pregnancy toxemia","type":"exact"},{"name":"proteinuric hypertension of pregnancy","type":"exact"},{"name":"toxaemia of pregnancy","type":"related"},{"name":"toxemia of pregnancy","type":"related"}],"termid":"MONDO:0005081","xrefs":{"Monarch":{"xref_id":"0005081"}}}


id: MONDO:0020337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital dyserythropoietic anemiatype I (CDA I) is a hematologic disorder of erythropoiesis characterized by moderate to severe macrocytic anemia occasionally associated with limb or nail deformities and scoliosis.","definition_xrefs":["Orphanet:98869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anemia","termid":"MONDO:0000577"},{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia","termid":"MONDO:0019403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"congenital dyserythropoietic anemia type 1","secondary_identifiers":["MEDGEN:82891","SCTID:59548005","UMLS:C0271933","DOID:0111396","NANDO:1200886","GARD:2000"],"synonyms":[{"name":"CDA I","type":"exact"},{"name":"CDA type 1","type":"exact"},{"name":"CDA type I","type":"exact"},{"name":"anemia, dyserythropoietic, congenital type 1","type":"related"},{"name":"congenital dyserythropoietic anemia type 1","type":"exact"},{"name":"dyserythropoietic anemia, congenital type 1","type":"related"},{"name":"type I congenital dyserythropoietic anaemia","type":"related"},{"name":"type I congenital dyserythropoietic anemia","type":"related"}],"termid":"MONDO:0020337","xrefs":{"Monarch":{"xref_id":"0020337"}}}


id: PBO:0011110
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spt6 binding correlates with that of RNAPII at the heterochromatin","termid":"PBO:0011110"}


id: MONDO:0011040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysplasia, Anhalt type","secondary_identifiers":["MESH:C563348","MEDGEN:318632","UMLS:C1832464","OMIM:601344"],"synonyms":[{"name":"spinal dysplasia, Anhalt type","type":"exact"}],"termid":"MONDO:0011040","xrefs":{"Monarch":{"xref_id":"0011040"}}}


id: FYPO:0000917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of citrate (Si)-synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal citrate (Si)-synthase activity","synonyms":[{"name":"abnormal citrate synthase activity","type":"broad"}],"termid":"FYPO:0000917"}


id: MONDO:0020553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Secondary pulmonary hemosiderosis is a respiratory disease due to the deposition of hemosiderin-laden macrophages in lungs as a result of repeated alveolar hemorrhage secondary to another disease, especially dysimmunitary disorders (i.e. Heiner syndrome, autoimmune diseases), thrombotic disorders and cardiovascular disorders such as mitral stenosis. It manifests as a triad of hemoptysis, anemia and diffuse parenchymal infiltrates on chest radiography","definition_xrefs":["Orphanet:99930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary pulmonary hemosiderosis","secondary_identifiers":["SCTID:716712004","MEDGEN:909854","GARD:19713","ICD10EXP:E83.1+","ICD10EXP:J99.8*","icd11.foundation:878618614","UMLS:C4274326"],"termid":"MONDO:0020553","xrefs":{"Monarch":{"xref_id":"0020553"}}}


id: GO:0051253
data:
  {"annotated_genes":["SJAG_00142","SJAG_03696","SJAG_04381","SJAG_02858","SJAG_02846","SJAG_03883","SJAG_01799","SJAG_02370","SJAG_02981","SJAG_04026","SJAG_00996","SJAG_00792","SJAG_03845","SJAG_00163","SJAG_03067","SJAG_03319","SJAG_04512","SJAG_02255","SJAG_01311","SJAG_04607","SJAG_04039","SJAG_01680","SJAG_02752","SJAG_00987","SJAG_01000","SJAG_04312","SJAG_00290","SJAG_01254","SJAG_02385","SJAG_00926","SJAG_00802","SJAG_00969","SJAG_04539","SJAG_01804","SJAG_00441","SJAG_02573","SJAG_01707","SJAG_04586","SJAG_00266","SJAG_01199","SJAG_04249","SJAG_03081","SJAG_02898","SJAG_01728","SJAG_03283","SJAG_02444","SJAG_01331","SJAG_04268","SJAG_02104","SJAG_00861","SJAG_04921","SJAG_03473","SJAG_00124","SJAG_01157","SJAG_04946","SJAG_00797","SJAG_04584","SJAG_04613","SJAG_04825","SJAG_03143","SJAG_02730","SJAG_00410","SJAG_01230"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100415,79148,90532,79085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[89827,71033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[108279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"},{"annotations":[101390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045892"},{"annotations":[90127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[92010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"},{"annotations":[72459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902369"},{"annotations":[72552,74205,94568,74010,108281,74435,77376,91524,101315,107044,109323,104271,114568,94224,117671,112400,70920,93739,111032,80791,77114,91596,93641,94980,79855,92477,94082,113280,106229,106813,72256,73597,103869,75710,95063,74661,102165,92501,107064,114134,106135,87933,106571,96617,108542,108884,111454,104572,70477,99210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000122"},{"annotations":[74062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"},{"annotations":[101316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010621"},{"annotations":[118237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"},{"annotations":[90978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving RNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"negatively_regulates","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00142":null,"SJAG_00163":null,"SJAG_00266":null,"SJAG_00290":null,"SJAG_00410":null,"SJAG_00441":null,"SJAG_00792":null,"SJAG_00797":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00969":null,"SJAG_00987":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01157":null,"SJAG_01199":null,"SJAG_01230":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01331":null,"SJAG_01680":null,"SJAG_01707":null,"SJAG_01728":null,"SJAG_01799":null,"SJAG_01804":null,"SJAG_02104":null,"SJAG_02255":null,"SJAG_02370":null,"SJAG_02385":null,"SJAG_02444":null,"SJAG_02573":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02846":null,"SJAG_02858":null,"SJAG_02898":null,"SJAG_02981":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03143":null,"SJAG_03283":null,"SJAG_03319":null,"SJAG_03473":null,"SJAG_03696":null,"SJAG_03845":null,"SJAG_03883":null,"SJAG_04026":null,"SJAG_04039":null,"SJAG_04249":null,"SJAG_04268":null,"SJAG_04312":null,"SJAG_04381":null,"SJAG_04512":null,"SJAG_04539":null,"SJAG_04584":null,"SJAG_04586":null,"SJAG_04607":null,"SJAG_04613":null,"SJAG_04825":null,"SJAG_04921":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA metabolic process","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of RNA metabolic process","type":"exact"},{"name":"down-regulation of RNA metabolic process","type":"exact"},{"name":"downregulation of RNA metabolic process","type":"exact"},{"name":"inhibition of RNA metabolic process","type":"narrow"},{"name":"negative regulation of RNA metabolism","type":"exact"}],"termid":"GO:0051253","terms_by_termid":{"GO:0000122":null,"GO:0010621":null,"GO:0016480":null,"GO:0034244":null,"GO:0045892":null,"GO:0048255":null,"GO:0060195":null,"GO:0060212":null,"GO:0070935":null,"GO:0090669":null,"GO:0120271":null,"GO:1902369":null}}


id: PBO:0082234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-glucosidase; weak, but broad substrate specificity for alpha-1,4- and alpha-1,6-glucosides; member of IMA isomaltase family; not required for isomaltose utilization, but Ima4p overexpression allows the ima1 null mutant to grow on isomaltose; identical to IMA3","termid":"PBO:0082234"}


id: PBO:0060291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6B antisense RNA 1","termid":"PBO:0060291"}


id: PBO:0085143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein that mediates homolog segregation during meiosis I; forms a complex with Lrs4p and then Mam1p at kinetochores; required for condensin recruitment to the replication fork barrier site and rDNA repeat segregation","termid":"PBO:0085143"}


id: GO:0048020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR chemokine receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CCR chemokine receptor binding","synonyms":[{"name":"CCR chemokine receptor ligand","type":"narrow"},{"name":"beta chemokine receptor binding","type":"exact"},{"name":"beta chemokine receptor ligand","type":"narrow"}],"termid":"GO:0048020"}


id: PBO:0018223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, DUF3128, human c22orf39 ortholog","termid":"PBO:0018223"}


id: PBO:0002242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,4-alpha-glucosidase (predicted)","termid":"PBO:0002242"}


id: GO:0071550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a death domain (DD) interaction, as part of the extrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:amm","GOC:mtg_apoptosis","InterPro:IPR000488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0023052","GO:0065003"],"is_obsolete":false,"name":"death-inducing signaling complex assembly","secondary_identifiers":["Reactome:R-HSA-5357786"],"synonyms":[{"name":"DD-mediated complex assembly","type":"exact"},{"name":"DISC assembly","type":"exact"},{"name":"DISC formation","type":"exact"},{"name":"death domain-mediated complex assembly","type":"exact"},{"name":"death domain-mediated complex assembly involved in extrinsic apoptotic pathway","type":"exact"},{"name":"death-inducing signaling complex formation","type":"exact"},{"name":"death-inducing signalling complex assembly","type":"exact"}],"termid":"GO:0071550"}


id: GO:0102721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + 2 an ubiquinol = 2 H2O + 2 an ubiquinone.","definition_xrefs":["RHEA:30255","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ubiquinol:oxygen oxidoreductase activity","secondary_identifiers":["EC:1.10.3.11","MetaCyc:RXN-6883"],"termid":"GO:0102721"}


id: PBO:0057377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548as","termid":"PBO:0057377"}


id: MONDO:0003390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon, usually aggressive adenocarcinoma of the breast characterized by the presence of clear cells that contain glycogen.","definition_xrefs":["NCIT:C40368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive ductal breast carcinoma","termid":"MONDO:0004953"},{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"},{"relation_name":"is_a","term_name":"glycogen-rich carcinoma","termid":"MONDO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"glycogen-rich clear cell breast carcinoma","secondary_identifiers":["UMLS:C2012261","MEDGEN:1785052","ICDO:8315/3","DOID:5310"],"synonyms":[{"name":"glycogen-rich carcinoma","type":"broad"},{"name":"glycogen-rich carcinoma (morphologic abnormality)","type":"broad"},{"name":"glycogen-rich, clear cell breast carcinoma","type":"exact"}],"termid":"MONDO:0003390","xrefs":{"Monarch":{"xref_id":"0003390"}}}


id: GO:0086007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of a cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}


id: GO:0010871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency or rate of receptor biosynthesis. Receptor biosynthesis is the collection of chemical reactions and pathways resulting in the formation of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of receptor biosynthetic process (obsolete GO:0010871)","termid":"GO:0010871"}


id: GO:0030864
data:
  {"annotated_genes":["SJAG_03887","SJAG_03596","SJAG_01143","SJAG_00185","SJAG_00663","SJAG_01894","SJAG_03088","SJAG_01964","SJAG_02266","SJAG_04375","SJAG_03025","SJAG_01732","SJAG_03146","SJAG_04886","SJAG_02838","SJAG_03044","SJAG_00677","SJAG_03704","SJAG_02566","SJAG_04001","SJAG_02075","SJAG_02228","SJAG_02245","SJAG_04621","SJAG_02278","SJAG_01993","SJAG_04052","SJAG_02511","SJAG_02282","SJAG_04887","SJAG_04982","SJAG_00229","SJAG_01268","SJAG_03581","SJAG_02320","SJAG_00279","SJAG_00845","SJAG_04479","SJAG_04517","SJAG_01748","SJAG_04724","SJAG_01384","SJAG_04509","SJAG_01787","SJAG_04644","SJAG_03703","SJAG_04077","SJAG_01277","SJAG_01665","SJAG_03011","SJAG_03681","SJAG_02202","SJAG_00228","SJAG_04100","SJAG_02392","SJAG_01114","SJAG_03374","SJAG_00700","SJAG_04624","SJAG_04597","SJAG_02831","SJAG_02169","SJAG_03380","SJAG_02177","SJAG_00920","SJAG_03564","SJAG_01889","SJAG_03086","SJAG_03119","SJAG_00152","SJAG_00521","SJAG_03455","SJAG_02700","SJAG_00807","SJAG_00082","SJAG_04498","SJAG_05285","SJAG_01943","SJAG_00750","SJAG_00907","SJAG_03625","SJAG_00970","SJAG_03145","SJAG_03375","SJAG_03379","SJAG_02864","SJAG_02737","SJAG_04465","SJAG_00268","SJAG_03631","SJAG_00938","SJAG_04703","SJAG_00649","SJAG_02431","SJAG_04461","SJAG_03465"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89705],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030478"},{"annotations":[111974,112494,116467,91008,93994,72404,79663,107348,78099,66183,99999,103373,98042,109359,80551,102060,115182,119155,101265,79519,110992,65080,69561,79982,98237,75116,77218,74317,103050,105458,76400,105668,111328,102824,112468,70323,75589,69659,106340,118792,92920,113208,114619,95614,101234,74792,77208,94159,105476,88487,107163],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030479"},{"annotations":[119713,119467,119712,119714,119715,119716,119771],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005826"},{"annotations":[116115,119868,88229,75287,98609,111066,90153,76701,92879,101585,94915,119134,119863,107204,119884,105672,117940,101578,94163,119872,89666,91059,116199,119870,119865],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110085"},{"annotations":[109365,100852,118174,101018,105463],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120106"},{"annotations":[111108,94743,91106,109366,112608,106520,113664,104009,118192,96652,101248,118175,88613,90327,95275,96177,97526],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120105"},{"annotations":[80104,108439,78591,117331,107356,100434,117237,92663,109367,98350,101276,98219,97971,104233,118176],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120104"}]},"cv_name":"cellular_component","definition":"The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical cytoskeleton","termid":"GO:0030863"},{"relation_name":"part_of","term_name":"actin 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actin cytoskeleton","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:27734801":null,"PMID:28655757":null,"PMID:36148799":null},"termid":"GO:0030864","terms_by_termid":{"GO:0005826":null,"GO:0030478":null,"GO:0030479":null,"GO:0110085":null,"GO:0120104":null,"GO:0120105":null,"GO:0120106":null}}


id: PR:P36630
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A G2/mitotic-specific cyclin-B2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01138","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/mitotic-specific cyclin cig2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.03","secondary_identifiers":["UniProtKB:P36630"],"synonyms":[{"name":"Spom972h-CCNB2","type":"exact"}],"termid":"PR:P36630"}


id: PBO:0030192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched_elongated_multinucleate_aseptate_vegetative_cell","termid":"PBO:0030192"}


id: PBO:0051013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF2 antisense RNA","termid":"PBO:0051013"}


id: PBO:0042415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 26 pseudogene 1","termid":"PBO:0042415"}


id: PBO:0089132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-PM contact site phospholipid-binding protein Hob2","termid":"PBO:0089132"}


id: GO:0015651
data:
  {"annotated_genes":["SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"}]},"cv_name":"molecular_function","definition":"Enables the transfer of quaternary ammonium groups from one side of a membrane to the other. Quaternary ammonium groups are any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"quaternary ammonium group transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015202"],"synonyms":[{"name":"quaternary amine transmembrane transporter activity","type":"exact"},{"name":"quaternary ammonium compound transporter activity","type":"exact"}],"termid":"GO:0015651","terms_by_termid":{"GO:0090422":null}}


id: PBO:0072875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salvador family WW domain containing protein 1","termid":"PBO:0072875"}


id: FYPO:0001103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of hydrogen peroxide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to hydrogen peroxide","synonyms":[{"name":"resistance to H2O2","type":"exact"},{"name":"resistance to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"resistance to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"resistant to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001103"}


id: PBO:0076022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 17b","termid":"PBO:0076022"}


id: MONDO:0800323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 4","secondary_identifiers":["MEDGEN:331449","UMLS:C1833154"],"synonyms":[{"name":"LQT4","type":"exact"}],"termid":"MONDO:0800323","xrefs":{"Monarch":{"xref_id":"0800323"}}}


id: MONDO:0033532
data:
  {"annotated_genes":["SJAG_05351"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85719],"is_not":false,"summary":null,"term":"MONDO:0033532"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05351":null},"genotype_count":0,"is_obsolete":false,"name":"Suleiman-El-Hattab syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1738652","OMIM:618950","UMLS:C5436458"],"synonyms":[{"name":"SULEHS","type":"related"},{"name":"SULEIMAN-EL-HATTAB SYNDROME","type":"related"}],"termid":"MONDO:0033532","terms_by_termid":{"MONDO:0033532":null},"xrefs":{"Monarch":{"xref_id":"0033532"}}}


id: GO:0140417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion from intracellular stores by a channel that opens when a ATP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:22736763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly gated calcium channel activity","termid":"GO:0015278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"intracellularly ATP-gated calcium channel activity","synonyms":[{"name":"ATP-sensitive calcium-release channel activity","type":"related"}],"termid":"GO:0140417"}


id: PATO:0000249
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000249 righting reflex (obsolete PATO:0000249)","termid":"PATO:0000249"}


id: PR:O74362
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- esf2 gene.","definition_xrefs":["UniProtKB:O74362","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein esf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.05","synonyms":[{"name":"18S rRNA factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-esf2","type":"exact"}],"termid":"PR:O74362"}


id: PBO:0055896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 17","termid":"PBO:0055896"}


id: GO:0021942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of postmitotic a Purkinje cell along radial glial cells from the ventricular zone to the Purkinje cell layer.","definition_xrefs":["GOC:dgh","PMID:15157725","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hindbrain radial glia guided cell migration","termid":"GO:0021932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glia guided migration of Purkinje cell","termid":"GO:0021942"}


id: PR:P0CT77
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L11-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.07c","synonyms":[{"name":"Spom972h-rpl1101","type":"exact"}],"termid":"PR:P0CT77"}


id: PBO:0091991
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Papulacandin B Resistance","termid":"PBO:0091991"}


id: MONDO:0012562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any holoprosencephaly in which the cause of the disease is a mutation in the PTCH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 7","secondary_identifiers":["OMIM:610828","MESH:C563660","UMLS:C1835820","MEDGEN:372134","DOID:0110876"],"synonyms":[{"name":"HPE7","type":"exact"},{"name":"PTCH1 holoprosencephaly","type":"exact"},{"name":"holoprosencephaly 7","type":"exact"},{"name":"holoprosencephaly caused by mutation in PTCH1","type":"exact"},{"name":"holoprosencephaly type 7","type":"exact"}],"termid":"MONDO:0012562","xrefs":{"Monarch":{"xref_id":"0012562"}}}


id: PBO:0049562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.K variant histone 1","termid":"PBO:0049562"}


id: MONDO:1011628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysm, non-human animal","secondary_identifiers":["OMIA:000772"],"termid":"MONDO:1011628","xrefs":{"Monarch":{"xref_id":"1011628"}}}


id: GO:0021815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Rearrangements of the microtubule cytoskeleton that contribute to the movement of cells along radial glial cells as a component of the process of cerebral cortex glial-mediated radial migration.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","GOC:dgh","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"part_of","term_name":"cell motility involved in cerebral cortex radial glia guided migration","termid":"GO:0021814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"modulation of microtubule cytoskeleton involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"modulation of microtubule cytoskeleton involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021815"}


id: PBO:0060009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 29","termid":"PBO:0060009"}


id: MONDO:0012155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia (CA) is a congenital anomaly of the posterior nasal airway characterized by the obstruction of one (unilateral) or both (bilateral) choanal aperture(s), with clinical manifestations ranging from acute respiratory distress to chronic nasal obstruction.","definition_xrefs":["Orphanet:137914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasal cavity disorder","termid":"MONDO:0002232"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia","secondary_identifiers":["DOID:9574","ICD10CM:Q30.0","MESH:D002754","UMLS:C0008297","MedDRA:10008587","MEDGEN:3395","SCTID:204508009","ICD9:748.0","GARD:16951","icd11.foundation:2099486655","OMIM:608911"],"synonyms":[{"name":"PCA","type":"related"},{"name":"atresia of nares","type":"exact"},{"name":"choanal atresia, POSTERIOR","type":"related"},{"name":"imperforate nares","type":"exact"},{"name":"posterior choanal atresia","type":"exact"}],"termid":"MONDO:0012155","xrefs":{"Monarch":{"xref_id":"0012155"}}}


id: MOD:01001
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a 2-aminoisobutyric acid.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unnatural residue","termid":"MOD:00850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoisobutyric acid residue (Aib)","synonyms":[{"name":"2-amino-2-methylpropanoic acid","type":"exact"},{"name":"2-amino-2-methylpropionic acid","type":"exact"},{"name":"2-methylalanine","type":"exact"},{"name":"Aib","type":"exact"},{"name":"alpha,alpha-dimethylglycine","type":"exact"},{"name":"alpha-aminoisobutyric acid","type":"exact"},{"name":"alpha-methylalanine","type":"exact"}],"termid":"MOD:01001"}


id: FYECO:0000459
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which potassium nitrate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ potassium nitrate","synonyms":[{"name":"+ KNO3","type":"exact"}],"termid":"FYECO:0000459"}


id: GO:0015360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: acetate(out) + H+(out) = acetate(in) + H+(in).","definition_xrefs":["TC:2.A.44.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"acetate:monoatomic cation symporter activity","termid":"GO:0043893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"acetate:proton symporter activity","secondary_identifiers":["GO:0015357"],"synonyms":[{"name":"acetate:hydrogen symporter activity","type":"exact"},{"name":"hydrogen:acetate symporter activity","type":"exact"}],"termid":"GO:0015360"}


id: PBO:0030124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_sulfur_level","termid":"PBO:0030124"}


id: GO:0090289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte proliferation","termid":"GO:0070663"},{"relation_name":"regulates","term_name":"osteoclast proliferation","termid":"GO:0002158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of osteoclast proliferation","termid":"GO:0090289"}


id: PBO:0061210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 3","termid":"PBO:0061210"}


id: MONDO:0006040
data:
  {"annotated_genes":["SJAG_00547","SJAG_01524"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012557"},{"annotations":[87569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009504"}]},"cv_name":"mondo","definition":"Metabolic acidosis characterized by the accumulation of lactate in the body. It is caused by tissue hypoxia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00547":null,"SJAG_01524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"lactic acidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1000036","UMLS:C0001125","MEDGEN:1717","MESH:D000140","SCTID:91273001"],"termid":"MONDO:0006040","terms_by_termid":{"MONDO:0009504":null,"MONDO:0012557":null},"xrefs":{"Monarch":{"xref_id":"0006040"}}}


id: GO:0045188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of non-rapid eye movement sleep.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, sleep","termid":"GO:0045187"},{"relation_name":"regulates","term_name":"circadian sleep/wake cycle, non-REM sleep","termid":"GO:0042748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of circadian sleep/wake cycle, non-REM sleep","synonyms":[{"name":"regulation of non-REM sleep","type":"exact"}],"termid":"GO:0045188"}


id: MONDO:0014834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dyskinesia, limb and orofacial, infantile-onset (obsolete MONDO:0014834)","termid":"MONDO:0014834","xrefs":{"Monarch":{"xref_id":"0014834"}}}


id: PBO:0065772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Q-nucleotide N-glycosylase 1","termid":"PBO:0065772"}


id: GO:0010680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid, which is then utilized in the metabolism of coumarin.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cinnamic acid biosynthetic process involved in coumarin metabolism (obsolete GO:0010680)","termid":"GO:0010680"}


id: GO:0032062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation in response to stress","termid":"GO:0032056"},{"relation_name":"is_a","term_name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translation in response to osmotic stress","synonyms":[{"name":"activation of translation in response to osmotic stress","type":"narrow"},{"name":"stimulation of translation in response to osmotic stress","type":"narrow"},{"name":"up regulation of translation in response to osmotic stress","type":"exact"},{"name":"up-regulation of translation in response to osmotic stress","type":"exact"},{"name":"upregulation of translation in response to osmotic stress","type":"exact"}],"termid":"GO:0032062"}


id: MONDO:0006133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma that arises from the cervix. It is characterized by the presence of cystic spaces surrounded by palisaded epithelial cells. The cystic spaces contain eosinophilic hyaline material or mucin. Nuclear pleomorphism, necrotic changes, and a high mitotic rate are also present.","definition_xrefs":["NCIT:C6346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical adenoid cystic carcinoma","secondary_identifiers":["EFO:1000161","MEDGEN:232337","DOID:4867","Orphanet:213823","ICD10CM:C53.0","GARD:20498","UMLS:C1332911","ONCOTREE:CACC"],"synonyms":[{"name":"adenoid cystic carcinoma of cervix","type":"exact"},{"name":"adenoid cystic carcinoma of cervix uteri","type":"exact"},{"name":"adenoid cystic carcinoma of the cervix","type":"exact"},{"name":"adenoid cystic carcinoma of the cervix uteri","type":"exact"},{"name":"adenoid cystic carcinoma of the uterine cervix","type":"exact"},{"name":"adenoid cystic carcinoma of uterine cervix","type":"exact"},{"name":"cervical adenoid cystic cancer","type":"exact"},{"name":"cervical adenoid cystic carcinoma","type":"exact"},{"name":"cervix uteri adenoid cystic carcinoma","type":"exact"},{"name":"uterine cervix adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0006133","xrefs":{"Monarch":{"xref_id":"0006133"}}}


id: PBO:0067163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 216, pseudogene","termid":"PBO:0067163"}


id: GO:0004731
data:
  {"annotated_genes":["SJAG_03881","SJAG_01359"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79437],"is_not":false,"summary":null,"term":"GO:0004731"},{"annotations":[78222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017061"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.","definition_xrefs":["EC:2.4.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01359":null,"SJAG_03881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"purine-nucleoside phosphorylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9735775","Reactome:R-HSA-112034","Reactome:R-HSA-74249","Reactome:R-HSA-74242","Reactome:R-HSA-9735789","Reactome:R-HSA-112033","Reactome:R-HSA-9755044","MetaCyc:PNP-RXN","RHEA:19805"],"synonyms":[{"name":"PNPase activity","type":"related"},{"name":"PUNPI","type":"related"},{"name":"PUNPII","type":"related"},{"name":"inosine phosphorylase activity","type":"narrow"},{"name":"inosine-guanosine phosphorylase activity","type":"related"},{"name":"purine deoxynucleoside phosphorylase activity","type":"related"},{"name":"purine deoxyribonucleoside phosphorylase activity","type":"related"},{"name":"purine nucleoside phosphorylase activity","type":"related"},{"name":"purine ribonucleoside phosphorylase activity","type":"related"},{"name":"purine-nucleoside:phosphate ribosyltransferase activity","type":"related"}],"termid":"GO:0004731","terms_by_termid":{"GO:0004731":null,"GO:0017061":null}}


id: PBO:0081301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 83","termid":"PBO:0081301"}


id: PBO:0029353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_binding","termid":"PBO:0029353"}


id: PBO:0057037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 130a","termid":"PBO:0057037"}


id: MOD:00051
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to N-acetyl-L-aspartic acid.","definition_xrefs":["PubMed:2395459","RESID:AA0042","ChEBI:21547","PubMed:1560020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-aspartic acid","synonyms":[{"name":"(2S)-2-(acetamido)butanedioic acid","type":"exact"},{"name":"2-(acetylamino)butanedioic acid","type":"exact"},{"name":"2-(acetylazanyl)butanedioic acid","type":"exact"},{"name":"AcAsp","type":"exact"},{"name":"MOD_RES N-acetylaspartate","type":"exact"},{"name":"N-acetyl-L-aspartic acid","type":"exact"},{"name":"N-acetylated L-aspartic acid","type":"exact"},{"name":"acetylaspartic acid","type":"exact"}],"termid":"MOD:00051"}


id: MONDO:0014513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nemaline myopathy in which the cause of the disease is a mutation in the LMOD3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe congenital nemaline myopathy","termid":"MONDO:0015735"},{"relation_name":"is_a","term_name":"typical nemaline myopathy","termid":"MONDO:0015737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"nemaline myopathy 10","secondary_identifiers":["UMLS:C4015360","DOID:0110931","GARD:16066","MEDGEN:863797","OMIM:616165"],"synonyms":[{"name":"LMOD3 nemaline myopathy","type":"exact"},{"name":"NEM10","type":"exact"},{"name":"nemaline myopathy 10","type":"exact"},{"name":"nemaline myopathy caused by mutation in LMOD3","type":"exact"},{"name":"nemaline myopathy type 10","type":"exact"}],"termid":"MONDO:0014513","xrefs":{"Monarch":{"xref_id":"0014513"}}}


id: PBO:0116266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase, also known as reptin; conserved component of multiple complexes including the INO80 complex, the Swr1 complex, the R2TP complex (Rvb1-Rvb2-Tah1-Pih1) and the TTT Hsp90 cochaperone complex that is involved in chromatin remodeling and telomeric chromatin regulation; involved in multiple processes such as chromatin remodeling, box C/D snoRNP assembly, and RNA polymerase II assembly; member of the AAA+ and RuvB protein families, similar to Rvb1p","termid":"PBO:0116266"}


id: GO:0055010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cardiac ventricle muscle is generated and organized.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue morphogenesis","termid":"GO:0055008"},{"relation_name":"part_of","term_name":"cardiac ventricle morphogenesis","termid":"GO:0003208"},{"relation_name":"part_of","term_name":"ventricular cardiac muscle tissue development","termid":"GO:0003229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle tissue morphogenesis","synonyms":[{"name":"cardiac ventricle muscle morphogenesis","type":"exact"},{"name":"ventricular heart muscle morphogenesis","type":"exact"}],"termid":"GO:0055010"}


id: PBO:0030922
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_in_stationary_phase","termid":"PBO:0030922"}


id: GO:0097436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in entry into dormancy. Dormancy (sometimes called a dormant state) is a suspension of most physiological activity and growth that can be reactivated.","definition_xrefs":["PO_REF:00009","GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into dormancy","synonyms":[{"name":"induction of dormancy","type":"exact"}],"termid":"GO:0097436"}


id: PBO:0117102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLK antisense RNA 1","termid":"PBO:0117102"}


id: PBO:0040012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 1","termid":"PBO:0040012"}


id: MONDO:0019503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of developmental anomalies that affect the development of the anterior segment of the eyeball resulting from abnormalities of neural crest migration and differentiation during embryologic development (Axenfeld-Rieger syndrome, Peters anomaly, posterior keratoconus, and iridoschisis).","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic developmental defect of the eye (obsolete MONDO:0015217)","termid":"MONDO:0015217"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior segment dysgenesis","secondary_identifiers":["GARD:10025","icd11.foundation:1182282997","MEDGEN:350766","icd11.foundation:943599144","NANDO:1201000","DOID:0060648","SCTID:65075004","OMIMPS:107250","UMLS:C1862839","Orphanet:88632","ICD9:743.49"],"synonyms":[{"name":"ASGD","type":"exact"},{"name":"ASMD","type":"exact"},{"name":"ASOD","type":"exact"},{"name":"anterior segment mesenchymal dysgenesis","type":"exact"},{"name":"anterior segment ocular dysgenesis","type":"exact"},{"name":"familial ocular anterior segment mesenchymal dysgenesis","type":"exact"}],"termid":"MONDO:0019503","xrefs":{"Monarch":{"xref_id":"0019503"}}}


id: PBO:0091581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Yip11/Gem2","termid":"PBO:0091581"}


id: GO:0016139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"glycosyl compound catabolic process","termid":"GO:1901658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoside catabolic process","secondary_identifiers":["GO:0016142"],"synonyms":[{"name":"O-glycoside breakdown","type":"exact"},{"name":"O-glycoside catabolic process","type":"exact"},{"name":"O-glycoside catabolism","type":"exact"},{"name":"O-glycoside degradation","type":"exact"},{"name":"glycoside breakdown","type":"exact"},{"name":"glycoside catabolism","type":"exact"},{"name":"glycoside degradation","type":"exact"}],"termid":"GO:0016139"}


id: PBO:0041021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 4","termid":"PBO:0041021"}


id: MONDO:0040922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"latent syphilis","termid":"MONDO:0005822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent early syphilis","secondary_identifiers":["icd11.foundation:1768103550","UMLS:C0275842","SCTID:186867005","MEDGEN:546880"],"synonyms":[{"name":"latent early syphilis","type":"exact"}],"termid":"MONDO:0040922","xrefs":{"Monarch":{"xref_id":"0040922"}}}


id: PBO:0003167
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.1.47","termid":"PBO:0003167"}


id: FYPO:0006587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the plasma membrane at the tip of a shmoo, or mating projection, is decreased.","definition_xrefs":["PMID:29134248","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip membrane","termid":"FYPO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to shmoo tip membrane","synonyms":[{"name":"decreased protein localisation to shmoo tip membrane","type":"exact"},{"name":"decreased protein localization to mating projection tip membrane","type":"exact"},{"name":"decreased protein localization to plasma membrane at shmoo tip","type":"exact"},{"name":"decreased protein localization to shmoo membrane fusion domain","type":"exact"},{"name":"decreased protein localization to shmoo projection membrane","type":"related"},{"name":"reduced protein localization to shmoo tip membrane","type":"exact"}],"termid":"FYPO:0006587"}


id: MONDO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuropathy arising from inflammation of one or more nerves.","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuritis","secondary_identifiers":["NCIT:C116381","UMLS:C0027813","DOID:1803","SCTID:128192007","MESH:D009443","MEDGEN:14344","SCTID:84299009","ICD9:729.2"],"synonyms":[{"name":"nerve inflammation","type":"exact"},{"name":"peripheral neuritis","type":"exact"}],"termid":"MONDO:0002122","xrefs":{"Monarch":{"xref_id":"0002122"}}}


id: GO:0043773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (1) GTP + F420-0 + L-glutamate = GDP + phosphate + F420-1, and (2) GTP + F420-1 + L-glutamate = GDP + phosphate + gamma-F420-2. This is the GTP-dependent successive addition of two L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form F420-0-glutamyl-glutamate (F420-2), with a gamma-linkage between the two glutamates.","definition_xrefs":["PMID:17669425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"coenzyme F420-0 gamma-glutamyl ligase activity","synonyms":[{"name":"F420-0 gamma-glutamyl ligase activity","type":"exact"}],"termid":"GO:0043773"}


id: PBO:0065970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 paralog D","termid":"PBO:0065970"}


id: PBO:0046853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase 2","termid":"PBO:0046853"}


id: PBO:0068353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 133","termid":"PBO:0068353"}


id: GO:0019416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of thiosulfate to tetrathionate, using cytochrome c as an electron acceptor.","definition_xrefs":["MetaCyc:THIOSULFOX-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"polythionate oxidation","termid":"GO:0019416"}


id: PBO:0000875
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplicated in S. pombe","termid":"PBO:0000875"}


id: PBO:0063795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 23","termid":"PBO:0063795"}


id: PBO:0038565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABL proto-oncogene 1, non-receptor tyrosine kinase","termid":"PBO:0038565"}


id: SO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The untranslated sequence separating the 'cistrons' of multicistronic mRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR","termid":"SO:0000203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"untranslated_region_polycistronic_mRNA","synonyms":[{"name":"untranslated region polycistronic mRNA","type":"exact"}],"termid":"SO:0000242"}


id: PBO:0084706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane ADP/ATP translocator; exchanges cytosolic ADP for mitochondrially synthesized ATP; expressed under anaerobic conditions; similar to Aac1p; has roles in maintenance of viability and in respiration; AAC3 has a paralog, PET9, that arose from the whole genome duplication","termid":"PBO:0084706"}


id: GO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological process in which dietary excess is sensed by the central nervous system, resulting in a reduction in food intake and increased energy expenditure.","definition_xrefs":["GOC:pr","PMID:12161655","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"},{"relation_name":"is_a","term_name":"energy homeostasis","termid":"GO:0097009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dietary excess","termid":"GO:0002021"}


id: FYPO:0008006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton phenotype observed during mitotic interphase in which the microtubule minus ends are dynamic (they alternate between growth and shrinkage phases).","definition_xrefs":["PMID:21444751","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"dynamic microtubule minus ends in interphase bundles","synonyms":[{"name":"dynamic microtubule minus ends during interphase","type":"broad"},{"name":"uncapped microtubule minus ends during interphase","type":"broad"},{"name":"uncapped microtubule minus ends in interphase bundles","type":"broad"}],"termid":"FYPO:0008006"}


id: MONDO:0015340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"DRESS syndrome (Drug Rash with Eosinophilia and Systemic Symptoms) is a hypersensitivity reaction characterized by a generalized skin rash, fever, eosinophilia, lymphocytosis and visceral involvement (hepatitis, nephritis, pneumonitis, pericarditis and myocarditis) and, in some patients, reactivation of human herpes virus 6.","definition_xrefs":["Orphanet:139402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"is_a","term_name":"severe cutaneous adverse reaction","termid":"MONDO:0005594"},{"relation_name":"is_a","term_name":"toxic dermatosis","termid":"MONDO:0017396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"drug rash with eosinophilia and systemic symptoms","secondary_identifiers":["icd11.foundation:516577496","SCTID:702809001","MESH:D063926","MEDGEN:762193","MedDRA:10058919","UMLS:C3541994","NCIT:C112208","GARD:13629"],"synonyms":[{"name":"DHS","type":"exact"},{"name":"DRESS","type":"exact"},{"name":"DRESS syndrome","type":"exact"},{"name":"Drug hypersensitivity syndrome","type":"exact"},{"name":"Drug reaction with eosinophilia and Systemic symptoms","type":"exact"},{"name":"dress","type":"exact"},{"name":"drug reaction eosinophilic systemic syndrome","type":"exact"}],"termid":"MONDO:0015340","xrefs":{"Monarch":{"xref_id":"0015340"}}}


id: GO:0045860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein kinase activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"positive regulation of kinase activity","termid":"GO:0033674"},{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein kinase activity","synonyms":[{"name":"stimulation of protein kinase activity","type":"narrow"},{"name":"up regulation of protein kinase activity","type":"exact"},{"name":"up-regulation of protein kinase activity","type":"exact"},{"name":"upregulation of protein kinase activity","type":"exact"}],"termid":"GO:0045860"}


id: PR:Q9P7D7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional protein aas that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid--CoA ligase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.11c","secondary_identifiers":["UniProtKB:Q9P7D7"],"synonyms":[{"name":"SPBP4H10.11c","type":"related"},{"name":"Spom972h-aas","type":"exact"},{"name":"fatty acid activator 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"long-chain acyl-CoA synthetase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7D7"}


id: PBO:0068171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 478","termid":"PBO:0068171"}


id: PBO:0040235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATF6 divergent transcript","termid":"PBO:0040235"}


id: GO:0051976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine via the intermediates alpha-aminoadipic acid and N2-acetyl-alpha-aminoadipate. This pathway of prokaryotic lysine biosynthesis via alpha-aminoadipate was discovered in the hyper-thermophilic Gram-negative eubacterium Thermus thermophilus. The pathway proceeds as follows: alpha-ketoglutarate is converted to homocitrate, which is metabolized to 3-carboxyhex-2-enedioate and then homoisocitrate. This is then decarboxylated to form alpha-ketoadipate, which is then converted to alpha-aminoadipate. This undergoes acetylation, to form N2-acetyl-alpha-aminoadipate, and is then phosphorylated to give N2-acetyl-alpha-aminoadipyl-delta-phosphate. This is converted to N2-acetyl-alpha-aminoadipate semialdehyde, which is then converted to N2-acetyl-L-lysine. A final deacetylation reaction produces L-lysine.","definition_xrefs":["MetaCyc:PWY-3081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process via aminoadipic acid","termid":"GO:0019878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"lysine biosynthetic process via alpha-aminoadipate and N2-acetyl-alpha-aminoadipate","synonyms":[{"name":"lysine biosynthesis via aminoadipic acid and N2-acetyl-alpha-aminoadipate","type":"exact"},{"name":"lysine biosynthetic process via aminoadipic acid and N2-acetyl-alpha-aminoadipate","type":"exact"}],"termid":"GO:0051976"}


id: GO:0016858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Racemase and epimerase activity on compounds other than amino acids, hydroxy acids, carbohydrates or their derivatives.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete racemase and epimerase activity, acting on other compounds (obsolete GO:0016858)","synonyms":[{"name":"racemase and epimerase activity, acting on other compounds","type":"exact"}],"termid":"GO:0016858"}


id: PBO:0001705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase epsilon subunit Ost2 (predicted)","termid":"PBO:0001705"}


id: PBO:0087225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Second largest subunit of DNA polymerase II (DNA polymerase epsilon); required for maintenance of fidelity of chromosomal replication; essential motif in C-terminus is required for formation of the four-subunit Pol epsilon; expression peaks at the G1/S phase boundary; Cdc28p substrate","termid":"PBO:0087225"}


id: PBO:0091906
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human AGO2","termid":"PBO:0091906"}


id: GO:0090577
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase IV.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA polymerase IV transcription regulator complex","synonyms":[{"name":"RNA polymerase IV transcription factor complex","type":"narrow"}],"termid":"GO:0090577"}


id: PBO:0059053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motor neuron and pancreas homeobox 1","termid":"PBO:0059053"}


id: PR:Q9UUK4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tma23 gene.","definition_xrefs":["UniProtKB:Q9UUK4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1952.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.02","synonyms":[{"name":"Spom972h-tma23","type":"exact"}],"termid":"PR:Q9UUK4"}


id: FYPO:0007489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is decreased, and the protein is present in the cytosol instead.","definition_xrefs":["PMID:32918581","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to Golgi apparatus","termid":"FYPO:0004786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to cytosol","synonyms":[{"name":"decreased protein localisation to Golgi apparatus, with protein mislocalised to cytosol","type":"exact"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to cytosol during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to cytosol during vegetative growth","type":"exact"},{"name":"reduced protein localization to Golgi apparatus, with protein mislocalized to cytosol","type":"exact"}],"termid":"FYPO:0007489"}


id: PBO:0057654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1246","termid":"PBO:0057654"}


id: GO:0060952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a cardiac glial cell over time, from its formation to the fully functional mature cell.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"cardiac glial cell differentiation","termid":"GO:0060950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac glial cell development","termid":"GO:0060952"}


id: PBO:0029973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_gamma_radiation","termid":"PBO:0029973"}


id: MONDO:1011339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Obstetric disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obstetric disorder, non-human animal","termid":"MONDO:1011339","xrefs":{"Monarch":{"xref_id":"1011339"}}}


id: PBO:0112746
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSF-Responsive Gene","termid":"PBO:0112746"}


id: PBO:0035754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_filament-based_movement","termid":"PBO:0035754"}


id: GO:0044827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism modulates the frequency, rate or extent of viral genome replication.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral process","termid":"GO:0044788"},{"relation_name":"regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of viral genome replication","synonyms":[{"name":"regulation by host of viral genome reproduction","type":"exact"}],"termid":"GO:0044827"}


id: PBO:0002359
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.7","termid":"PBO:0002359"}


id: PBO:0002880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine phosphatase Pyp2","termid":"PBO:0002880"}


id: FYPO:0003507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing zinc ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0000257","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on zinc","synonyms":[{"name":"normal cell population growth in presence of zinc","type":"exact"},{"name":"normal cell population growth on zinc","type":"exact"},{"name":"normal cell population growth on zinc ion","type":"exact"},{"name":"normal cellular response to zinc","type":"related"},{"name":"normal growth on zinc ions","type":"exact"},{"name":"normal vegetative cell population growth on zinc","type":"exact"}],"termid":"FYPO:0003507"}


id: GO:0051966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"synaptic transmission, glutamatergic","termid":"GO:0035249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of synaptic transmission, glutamatergic","termid":"GO:0051966"}


id: MONDO:1011846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothalamic dysplasia, non-human animal","secondary_identifiers":["OMIA:000535"],"termid":"MONDO:1011846","xrefs":{"Monarch":{"xref_id":"1011846"}}}


id: MONDO:0002659
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the choroid, ciliary body, or iris.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"uvea neoplasm","termid":"MONDO:0021225"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"uveal cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C6105","DOID:3479","MEDGEN:1772018","UMLS:C3665670","EFO:1001230"],"synonyms":[{"name":"cancer of uvea","type":"exact"},{"name":"malignant neoplasm of the uvea","type":"exact"},{"name":"malignant neoplasm of uvea","type":"exact"},{"name":"malignant tumor of the uvea","type":"exact"},{"name":"malignant tumor of uvea","type":"exact"},{"name":"malignant tumour of the uvea","type":"exact"},{"name":"malignant tumour of uvea","type":"exact"},{"name":"malignant uvea neoplasm","type":"exact"},{"name":"malignant uvea tumor","type":"exact"},{"name":"malignant uvea tumour","type":"exact"},{"name":"malignant uveal neoplasm","type":"exact"},{"name":"malignant uveal tumor","type":"exact"},{"name":"malignant uveal tumour","type":"exact"},{"name":"uvea cancer","type":"exact"},{"name":"uveal tumor","type":"broad"},{"name":"uveal tumour","type":"broad"}],"termid":"MONDO:0002659","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0002659"}}}


id: GO:0042953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"lipoprotein localization","termid":"GO:0044872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"lipoprotein transport","termid":"GO:0042953"}


id: MONDO:0001806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the squamous epithelium of the vagina. Representative examples include condyloma acuminatum, squamous papilloma, and squamous cell carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell neoplasm","termid":"MONDO:0002532"},{"relation_name":"is_a","term_name":"vaginal neoplasm","termid":"MONDO:0021050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal squamous tumor","secondary_identifiers":["DOID:138","MEDGEN:274381","UMLS:C1519931","NCIT:C40242"],"synonyms":[{"name":"vagina squamous cell neoplasm","type":"exact"},{"name":"vaginal squamous neoplasm","type":"exact"},{"name":"vaginal squamous tumor","type":"exact"}],"termid":"MONDO:0001806","xrefs":{"Monarch":{"xref_id":"0001806"}}}


id: GO:0030583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the myxococcal fruiting body over time, from its formation to the mature structure. The process begins when myxococci respond to a lack of nutrients in the environment and ends when the myxococcal fruiting body is a mature structure.","definition_xrefs":["ISBN:0815316194","PMID:11121786","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myxococcal fruiting body development","secondary_identifiers":["GO:0055084"],"synonyms":[{"name":"fruiting body development in cellular response to starvation","type":"broad"},{"name":"fruiting body development in response to starvation","type":"broad"}],"termid":"GO:0030583"}


id: GO:0006848
data:
  {"annotated_genes":["SJAG_04593","SJAG_01924"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63093,77109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006850"}]},"cv_name":"biological_process","definition":"The directed movement of pyruvate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01924":null,"SJAG_04593":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"pyruvate transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0006848","terms_by_termid":{"GO:0006850":null}}


id: PBO:0066557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 20","termid":"PBO:0066557"}


id: PBO:0088631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28/L44","termid":"PBO:0088631"}


id: MOD:01618
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alaine residue and an L-asparagine residue to L-alanyl-L-isoaspartyl cyclopeptide.","definition_xrefs":["PubMed:19928958","PubMed:3207697","RESID:AA0515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"crosslinked L-alanine residue","termid":"MOD:02040"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanyl-L-isoaspartyl cyclopeptide","synonyms":[{"name":"(2S,5S)-2-methyl-3,7-dioxo-1,4-diazepane-5-carboxylic acid","type":"exact"},{"name":"1,4.2-anhydro(L-alanyl-L-aspartic acid)","type":"exact"},{"name":"CROSSLNK Alanine isoaspartyl cyclopeptide (Ala-Asn)","type":"exact"},{"name":"L-alanyl-L-isoaspartyl cyclopeptide","type":"exact"}],"termid":"MOD:01618"}


id: GO:0007099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which a daughter centriole is formed perpendicular to an existing centriole. An immature centriole contains a ninefold radially symmetric array of single microtubules; mature centrioles consist of a radial array of nine microtubule triplets, doublets, or singlets depending upon the species and cell type. Duplicated centrioles also become the ciliary basal body in cells that form cilia during G0.","definition_xrefs":["GOC:cilia","PMID:9889124","ISBN:0815316194","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"centriole assembly","termid":"GO:0098534"},{"relation_name":"part_of","term_name":"centrosome duplication","termid":"GO:0051298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"centriole replication","secondary_identifiers":["GO:0032054"],"synonyms":[{"name":"centriole duplication","type":"exact"},{"name":"ciliary basal body duplication","type":"related"},{"name":"microtubule basal body duplication","type":"broad"}],"termid":"GO:0007099"}


id: PBO:0069752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1035, pseudogene","termid":"PBO:0069752"}


id: GO:0019346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interconversion of homocysteine and cysteine via cystathionine. In contrast with enteric bacteria and mammals, Saccharomyces cerevisiae has two transsulfuration pathways employing two separate sets of enzymes.","definition_xrefs":["MetaCyc:PWY-801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"homoserine metabolic process","termid":"GO:0009092"},{"relation_name":"is_a","term_name":"homocysteine metabolic process","termid":"GO:0050667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"transsulfuration","secondary_identifiers":["Reactome:R-HSA-1614603","Wikipedia:Transsulfuration_pathway"],"synonyms":[{"name":"homocysteine-cysteine interconversion","type":"narrow"},{"name":"transsulphuration","type":"exact"}],"termid":"GO:0019346"}


id: PBO:0039437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and death domain containing 1B","termid":"PBO:0039437"}


id: GO:0019363
data:
  {"annotated_genes":["SJAG_02618","SJAG_03298","SJAG_03946","SJAG_01500","SJAG_01566","SJAG_04693","SJAG_00957","SJAG_01582","SJAG_02889","SJAG_04467"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77806,113394,75100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[80285,99666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[80207,71445,78296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[89361,90992,109923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.","definition_xrefs":["GOC:vw","GOC:pde","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"pyridine nucleotide metabolic process","termid":"GO:0019362"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01500":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_03946":null,"SJAG_04467":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyridine nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyridine nucleotide anabolism","type":"exact"},{"name":"pyridine nucleotide biosynthesis","type":"exact"},{"name":"pyridine nucleotide formation","type":"exact"},{"name":"pyridine nucleotide synthesis","type":"exact"}],"termid":"GO:0019363","terms_by_termid":{"GO:0006741":null,"GO:0009435":null,"GO:0019358":null,"GO:0034355":null}}


id: MONDO:0020176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A neoplasm (disease) that involves the sebaceous gland of eyelid.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete palpebral sebaceous gland tumor (obsolete MONDO:0020176)","secondary_identifiers":["Orphanet:98585"],"synonyms":[{"name":"neoplasm of sebaceous gland of eyelid","type":"exact"},{"name":"sebaceous gland of eyelid neoplasm","type":"exact"},{"name":"sebaceous gland of eyelid neoplasm (disease)","type":"exact"},{"name":"sebaceous gland of eyelid tumor","type":"exact"},{"name":"sebaceous gland of eyelid tumour","type":"exact"},{"name":"tumor of sebaceous gland of eyelid","type":"exact"},{"name":"tumour of sebaceous gland of eyelid","type":"exact"}],"termid":"MONDO:0020176","xrefs":{"Monarch":{"xref_id":"0020176"}}}


id: PBO:0077490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 210","termid":"PBO:0077490"}


id: PBO:0057141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 219b","termid":"PBO:0057141"}


id: GO:1901839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of RNA polymerase I regulatory region sequence-specific DNA binding.","definition_xrefs":["GOC:TermGenie","GOC:sart"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of RNA polymerase I regulatory region sequence-specific DNA binding (obsolete GO:1901839)","termid":"GO:1901839"}


id: PBO:0066412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELT TNF receptor","termid":"PBO:0066412"}


id: PBO:0082180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGC family protein kinase; functional ortholog of mammalian S6 kinase; phosphorylated by Tor1p and required for TORC1-mediated regulation of ribosome biogenesis, translation initiation, and entry into G0 phase; involved in transactivation of osmostress-responsive genes; regulates G1 progression, cAPK activity and nitrogen activation of the FGM pathway; integrates nutrient signals and stress signals from sphingolipids to regulate lifespan","termid":"PBO:0082180"}


id: GO:0007469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the antenna over time, from its formation to the mature structure. The antenna are the sensory structures on the head that are capable of detecting various environmental stimuli.","direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"},{"relation_name":"part_of","term_name":"eye-antennal disc development","termid":"GO:0035214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antennal development","termid":"GO:0007469"}


id: MONDO:0004348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal telangiectasia","secondary_identifiers":["HP:0007763","ICD9:362.15","SCTID:84884003","UMLS:C0154835","MEDGEN:57598","DOID:7736"],"termid":"MONDO:0004348","xrefs":{"Monarch":{"xref_id":"0004348"}}}


id: GO:1901422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a butan-1-ol stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","PMID:24014527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to butan-1-ol","secondary_identifiers":["GO:1990336"],"synonyms":[{"name":"process resulting in tolerance to butan-1-ol","type":"narrow"}],"termid":"GO:1901422"}


id: MONDO:0056813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Breast carcinoma that does not respond to hormone therapy.","definition_xrefs":["NCIT:C114932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"hormone-resistant breast carcinoma","secondary_identifiers":["UMLS:C4049259","MEDGEN:1631521"],"synonyms":[{"name":"hormone-refractory breast cancer","type":"exact"},{"name":"hormone-resistant breast cancer","type":"exact"},{"name":"hormone-resistant breast carcinoma","type":"exact"}],"termid":"MONDO:0056813","xrefs":{"Monarch":{"xref_id":"0056813"}}}


id: PBO:0085115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar DEAD-box protein required for ribosome assembly and function; including synthesis of 60S ribosomal subunits; constituent of 66S pre-ribosomal particles","termid":"PBO:0085115"}


id: GO:1900440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900741"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:1900440"}


id: MONDO:0012505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary pigmented nodular adrenocortical disease in which the cause of the disease is a mutation in the PDE11A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary pigmented nodular adrenocortical disease","termid":"MONDO:0015999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pigmented nodular adrenocortical disease, primary, 2","secondary_identifiers":["DOID:0070547","OMIM:610475","MESH:C566472","UMLS:C1864851","GARD:15489","MEDGEN:355843"],"synonyms":[{"name":"Cushing syndrome, adrenal, due to PPNAD2","type":"related"},{"name":"PDE11A primary pigmented nodular adrenocortical disease","type":"exact"},{"name":"PPNAD2","type":"related"},{"name":"pigmented micronodular adrenocortical disease, primary, 2","type":"related"},{"name":"pigmented nodular adrenocortical disease, primary, 2","type":"exact"},{"name":"pigmented nodular adrenocortical disease, primary, type 2","type":"exact"},{"name":"primary pigmented nodular adrenocortical disease caused by mutation in PDE11A","type":"exact"}],"termid":"MONDO:0012505","xrefs":{"Monarch":{"xref_id":"0012505"}}}


id: PBO:0044116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen 2","termid":"PBO:0044116"}


id: GO:0062234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of platelet activating factor, 2-O-acetyl-1-O-octadecyl-sn-glycero-3-phosphocholine.","definition_xrefs":["PMID:16371369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol ether catabolic process","termid":"GO:0044269"},{"relation_name":"is_a","term_name":"platelet activating factor metabolic process","termid":"GO:0046469"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"platelet activating factor catabolic process","synonyms":[{"name":"2-O-acetyl-1-O-octadecyl-sn-glycero-3-phosphocholine catabolic process","type":"exact"},{"name":"PAF catabolic process","type":"related"}],"termid":"GO:0062234"}


id: PBO:0075902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3","termid":"PBO:0075902"}


id: PBO:0026731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_pole_body_during_anaphase","termid":"PBO:0026731"}


id: MONDO:0014695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glioma susceptibility 9 (obsolete MONDO:0014695)","termid":"MONDO:0014695","xrefs":{"Monarch":{"xref_id":"0014695"}}}


id: PBO:0083150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF RAD24/YER173W","termid":"PBO:0083150"}


id: MONDO:0009189
data:
  {"annotated_genes":["SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86105,86106],"is_not":false,"summary":null,"term":"MONDO:0009189"}]},"cv_name":"mondo","definition":"Multiple epiphyseal dysplasia type 4 is a multiple epiphyseal dysplasia with a late-childhood onset, characterized by joint pain involving hips, knees, wrists, and fingers with occasional limitation of joint movements, deformity of hands, feet, and knees (club foot, clinodactyly, brachydactyly), scoliosis and slightly reduced adult height. Radiographs display flat epiphyses with early arthritis of the hip, and double-layered patella. Multiple epiphyseal dysplasia type 4 follows an autosomal recessive mode of transmission. The disease is allelic to diastrophic dwarfism, atelosteogenesis type 2 and achondrogenesis type 1B with whom it forms a clinical continuum.","definition_xrefs":["Orphanet:93307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"},{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia","termid":"MONDO:0016648"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005066"],"is_obsolete":false,"name":"multiple epiphyseal dysplasia type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C535504","GARD:9793","ICD10CM:Q77.3","MEDGEN:376164","NORD:1881","OMIM:226900","UMLS:C1847593","DOID:0070300","SCTID:715672007","icd11.foundation:1927114777"],"synonyms":[{"name":"EDM4","type":"exact"},{"name":"MED4","type":"exact"},{"name":"Polyepiphyseal dysplasia type 4","type":"exact"},{"name":"Recessive Multiple Epiphyseal Dysplasia","type":"exact"},{"name":"SLC26A2 multiple epiphyseal dysplasia (disease)","type":"exact"},{"name":"autosomal recessive multiple epiphyseal dysplasia","type":"exact"},{"name":"epiphyseal dysplasia multiple 4","type":"related"},{"name":"epiphyseal dysplasia, multiple, 4","type":"related"},{"name":"epiphyseal dysplasia, multiple, type 4","type":"exact"},{"name":"multiple epiphyseal dysplasia (disease) caused by mutation in SLC26A2","type":"exact"},{"name":"multiple epiphyseal dysplasia 4","type":"related"},{"name":"multiple epiphyseal dysplasia with Bilayered patellae","type":"related"},{"name":"multiple epiphyseal dysplasia with clubfoot","type":"related"},{"name":"multiple epiphyseal dysplasia with double-layered patella","type":"related"},{"name":"multiple epiphyseal dysplasia, autosomal recessive","type":"related"},{"name":"rMED","type":"exact"}],"termid":"MONDO:0009189","terms_by_termid":{"MONDO:0009189":null},"xrefs":{"Monarch":{"xref_id":"0009189"}}}


id: PBO:0025475
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystinuria","termid":"PBO:0025475"}


id: GO:0035769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a B cell to cross a high endothelial venule in response to an external stimulus.","definition_xrefs":["CL:0000236","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte chemotaxis across high endothelial venule","termid":"GO:0002518"},{"relation_name":"is_a","term_name":"B cell chemotaxis","termid":"GO:0035754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell chemotaxis across high endothelial venule","synonyms":[{"name":"B-cell chemotaxis across high endothelial venule","type":"exact"}],"termid":"GO:0035769"}


id: PBO:0090081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic aminotransferase","termid":"PBO:0090081"}


id: MONDO:0005761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parasitic infestation of the human lymphatic system by wuchereria bancrofti or brugia malayi. It is also called lymphatic filariasis.","definition_xrefs":["MESH:D004605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic eyelid infestation","termid":"MONDO:0001812"},{"relation_name":"is_a","term_name":"elephantiasis","termid":"MONDO:0005424"},{"relation_name":"is_a","term_name":"filariasis","termid":"MONDO:0016075"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005046"],"is_obsolete":false,"name":"filarial elephantiasis","secondary_identifiers":["Orphanet:2035","GARD:3321","SCTID:240820001","icd11.foundation:247221550","MedDRA:10016675","ICD9:374.83","UMLS:C0013884","MEDGEN:8583","NORD:1082","DOID:12211","EFO:0007272","SCTID:14100003","NCIT:C128360"],"synonyms":[{"name":"Bancroftian elephantiasis","type":"exact"},{"name":"Bancroftian filarial chyluria","type":"exact"},{"name":"Bancroftian filariasis","type":"related"},{"name":"Elephantiasis","type":"broad"},{"name":"Malayi tropical eosinphilia","type":"related"},{"name":"Wuchereria Bancrofti infection","type":"related"},{"name":"Wuchereriasis","type":"related"},{"name":"elephantiasis","type":"broad"},{"name":"elephantiasis of eyelid","type":"exact"},{"name":"eyelid elephantiasis","type":"exact"}],"termid":"MONDO:0005761","xrefs":{"Monarch":{"xref_id":"0005761"}}}


id: PBO:0055900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 23","termid":"PBO:0055900"}


id: GO:0015153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of rhamnose from one side of a membrane to the other. Rhamnose occurs commonly as a compound of plant glycosides, in polysaccharides of gums and mucilages, and in bacterial polysaccharides. It is also a component of some plant cell wall polysaccharides and frequently acts as the sugar components of flavonoids.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"rhamnose transmembrane transporter activity","secondary_identifiers":["GO:0033297"],"synonyms":[{"name":"ATP-dependent rhamnose transmembrane transporter activity","type":"narrow"},{"name":"ATPase-coupled rhamnose transmembrane transporter activity","type":"narrow"},{"name":"rhamnose-transporting ATPase activity","type":"narrow"}],"termid":"GO:0015153"}


id: GO:0097434
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101977],"is_not":false,"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: succinate(out) + H+(out) = succinate(in) + H+(in).","definition_xrefs":["GOC:al","PMID:1293882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate transmembrane transporter activity","termid":"GO:0015141"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"succinate:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:29303"],"synonyms":[{"name":"succinate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0097434","terms_by_termid":{"GO:0097434":null}}


id: PBO:0086154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for pre-mRNA splicing; associates with the spliceosome and interacts with splicing factors Prp22p and Prp46p; orthologous to human transcriptional coactivator SKIP and can activate transcription of a reporter gene","termid":"PBO:0086154"}


id: PBO:0066643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulating synaptic membrane exocytosis 1","termid":"PBO:0066643"}


id: PBO:0088255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease Rex3","termid":"PBO:0088255"}


id: PBO:0047046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 110 member A","termid":"PBO:0047046"}


id: MONDO:0024556
data:
  {"annotated_genes":["SJAG_00824"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85723],"is_not":false,"summary":null,"term":"MONDO:0024556"}]},"cv_name":"mondo","definition":"Any epilepsy, familial focal, with variable foci in which the cause of the disease is a mutation in the DEPDC5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial focal epilepsy with variable foci","termid":"MONDO:0020310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial focal, with variable foci 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081421","OMIM:604364","UMLS:C4551983","GARD:18202","NCIT:C161005","MEDGEN:1641798"],"synonyms":[{"name":"DEPDC5 epilepsy, familial focal, with variable foci","type":"exact"},{"name":"FFEVF1","type":"related"},{"name":"epilepsy, familial focal, with variable foci","type":"related"},{"name":"epilepsy, familial focal, with variable foci 1","type":"exact"},{"name":"epilepsy, familial focal, with variable foci caused by mutation in DEPDC5","type":"exact"},{"name":"epilepsy, partial, with variable foci","type":"related"}],"termid":"MONDO:0024556","terms_by_termid":{"MONDO:0024556":null},"xrefs":{"Monarch":{"xref_id":"0024556"}}}


id: FYPO:0001956
data:
  {"alleles_by_uniquename":{"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119499],"is_not":false,"summary":null,"term":"FYPO:0001956"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is formed in the shape of a sphere.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04703":null},"genotype_count":1,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"spherical cell","references_by_uniquename":{"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_04703"],"single_locus_genotype_uniquenames":["for3delta"],"synonyms":[{"name":"orb","type":"exact"}],"termid":"FYPO:0001956","terms_by_termid":{"FYPO:0001956":null}}


id: PBO:0054067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1414","termid":"PBO:0054067"}


id: PBO:0047481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 8","termid":"PBO:0047481"}


id: PBO:0076702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 3 pseudogene 1","termid":"PBO:0076702"}


id: PBO:0083695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epoxide hydrolase; member of the alpha/beta hydrolase fold family; may have a role in detoxification of epoxides","termid":"PBO:0083695"}


id: GO:0071562
data:
  {"annotated_genes":["SJAG_00029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80676],"is_not":false,"summary":null,"term":"GO:0071562"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a nucleus-vacuole junction (NVJ), membrane contact sites formed between the vacuole membrane and the outer nuclear membrane. In S. cerevisiae these contacts are mediated through direct physical interaction between Vac8p and Nvj1p. The NVJ plays roles in piecemeal microautophagy of the nucleus and in the cytoplasm-to-vacuole targeting pathway.","definition_xrefs":["PMID:16709156","PMID:28533415","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00029":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0140056","GO:0008150","GO:0051179","GO:0044085"],"is_obsolete":false,"name":"nucleus-vacuole junction assembly","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"NV junction assembly","type":"exact"},{"name":"NV junction formation","type":"exact"},{"name":"NVJ assembly","type":"exact"},{"name":"NVJ formation","type":"exact"},{"name":"nucleus-vacuole junction formation","type":"exact"}],"termid":"GO:0071562","terms_by_termid":{"GO:0071562":null}}


id: PBO:0029882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_silent_mating-type_cassette","termid":"PBO:0029882"}


id: GO:0019065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any receptor-mediated endocytosis that is involved in the uptake of a virus into a host cell; successive instances of virus endocytosis result in the accumulation of virus particles within the cell.","definition_xrefs":["ISBN:0781702534","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"},{"relation_name":"is_a","term_name":"endocytosis involved in viral entry into host cell","termid":"GO:0075509"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"receptor-mediated endocytosis of virus by host cell","secondary_identifiers":["Reactome:R-HSA-168275"],"synonyms":[{"name":"receptor mediated endocytosis by host of virus particle","type":"exact"},{"name":"receptor mediated endocytosis of virus by host","type":"exact"},{"name":"receptor mediated endocytosis of virus particle by host","type":"exact"},{"name":"receptor-mediated endocytosis of virus by host","type":"exact"},{"name":"viral entry into host cell via receptor-mediated endocytosis","type":"related"},{"name":"viral receptor mediated endocytosis","type":"exact"},{"name":"virus receptor-mediated endocytosis by host","type":"exact"}],"termid":"GO:0019065"}


id: MONDO:0044794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, circumscribed proliferation of melanocytes in the skin. Variants include the Spitz nevus, halo nevus, blue nevus, and balloon cell nevus.","definition_xrefs":["NCIT:C7571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"benign melanocytic skin nevus","secondary_identifiers":["MEDGEN:264151","UMLS:C1456781"],"synonyms":[{"name":"benign melanocytic nevus","type":"exact"},{"name":"benign melanocytic nevus of skin","type":"exact"},{"name":"benign melanocytic nevus of the skin","type":"exact"},{"name":"benign melanocytic skin nevus","type":"exact"},{"name":"benign mole","type":"exact"},{"name":"benign nevus of skin","type":"exact"},{"name":"benign nevus of the skin","type":"exact"},{"name":"benign skin nevus","type":"exact"}],"termid":"MONDO:0044794","xrefs":{"Monarch":{"xref_id":"0044794"}}}


id: PBO:0065464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD7 divergent transcript","termid":"PBO:0065464"}


id: MONDO:0021162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"carotenemia","secondary_identifiers":["UMLS:C0154271","DOID:9969","ICD9:278.3","MEDGEN:56338","SCTID:35487009"],"synonyms":[{"name":"acquired carotenemia","type":"exact"},{"name":"hypercarotinemia","type":"exact"}],"termid":"MONDO:0021162","xrefs":{"Monarch":{"xref_id":"0021162"}}}


id: MONDO:0016810
data:
  {"annotated_genes":["SJAG_02658"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"}]},"cv_name":"mondo","definition":"Autosomal recessive form of progressive external ophthalmoplegia.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia","termid":"MONDO:0005181"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02658":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0004069","MONDO:0005066","MONDO:0005336","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive progressive external ophthalmoplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1191","Orphanet:254886","ICD10CM:H49.4","MESH:C564926","UMLS:C1850303","MEDGEN:340509"],"synonyms":[{"name":"arPEO","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal recessive","type":"exact"}],"termid":"MONDO:0016810","terms_by_termid":{"MONDO:0009783":null},"xrefs":{"Monarch":{"xref_id":"0016810"}}}


id: PBO:0044233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 2","termid":"PBO:0044233"}


id: MONDO:0012973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 12q15.","definition_xrefs":["PMID:19122664","DOID:0110901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 26","secondary_identifiers":["OMIM:612639","MEDGEN:382561","MESH:C567217","UMLS:C2675249"],"synonyms":[{"name":"IBD26","type":"exact"},{"name":"inflammatory bowel disease 26","type":"exact"},{"name":"inflammatory bowel disease type 26","type":"exact"}],"termid":"MONDO:0012973","xrefs":{"Monarch":{"xref_id":"0012973"}}}


id: PR:O13687
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit E (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.07","synonyms":[{"name":"Spom972h-vma4","type":"exact"},{"name":"V-ATPase subunit E (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit E (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13687"}


id: MONDO:0019563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CREST syndrome is a subtype of limited cutaneous systemic sclerosis (lcSSc) whose name is an acronym for the cardinal clinical features of the syndrome: calcinosis, Raynaud's phenomenon, esophageal dysmotility, sclerodactyly and telangiectasia.","definition_xrefs":["Orphanet:90290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"limited cutaneous systemic sclerosis","termid":"MONDO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"CREST syndrome","secondary_identifiers":["MESH:D017675","NANDO:1201011","DOID:0060218","SCTID:31848007","UMLS:C0206138","NCIT:C70646","MEDGEN:60083","MedDRA:10011380"],"synonyms":[{"name":"CRST syndrome","type":"narrow"},{"name":"CRST syndromes","type":"narrow"},{"name":"calcinosis - Raynaud phenomenon - esophageal involvement - sclerodactyly - telangiectasia","type":"related"},{"name":"calcinosis Raynaud phenomenon sclerodactyly telangiectasia","type":"related"},{"name":"calcinosis, Raynaud's phenomenon, esophageal dismobility, sclerodactyly, telangiectasia syndrome","type":"related"},{"name":"calcinosis-Raynaud phenomenon-esophageal involvement-sclerodactyly-telangiectasia syndrome","type":"exact"},{"name":"calcinosis-Raynaud phenomenon-sclerodactyly-telangiectasia","type":"related"},{"name":"lcSSc","type":"broad"},{"name":"limited cutaneous Systemic Scleroderma","type":"exact"},{"name":"limited cutaneous Systemic sclerosis","type":"exact"},{"name":"phenomenon-sclerodactyly-telangiectasia, calcinosis-Raynaud","type":"related"},{"name":"syndrome, CREST","type":"related"}],"termid":"MONDO:0019563","xrefs":{"Monarch":{"xref_id":"0019563"}}}


id: MONDO:0022656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy spherocytosis","termid":"MONDO:0022656","xrefs":{"Monarch":{"xref_id":"0022656"}}}


id: GO:0015782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of CMP-N-acetylneuraminate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate transmembrane transport","synonyms":[{"name":"CMP-N-acetylneuraminate transport","type":"related"},{"name":"CMP-sialic acid transport","type":"broad"}],"termid":"GO:0015782"}


id: PR:O94651
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A syntaxin-12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02377","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin pep12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.04","secondary_identifiers":["UniProtKB:O94651"],"synonyms":[{"name":"Spom972h-STX12","type":"exact"}],"termid":"PR:O94651"}


id: FYPO:0006082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin filament depolymerization, i.e. the removal of actin monomers from an actin filament, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0030042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal actin filament depolymerization","synonyms":[{"name":"normal actin filament depolymerisation","type":"exact"},{"name":"normal actin filament depolymerization during mitotic cell cycle","type":"related"},{"name":"normal microtubule actin filament during vegetative growth","type":"exact"}],"termid":"FYPO:0006082"}


id: PBO:0082063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyryl-CoA hydrolase; member of a family of enoyl-CoA hydratase/isomerases; non-tagged protein is detected in highly purified mitochondria in high-throughput studies; phosphorylated; mutation affects fluid-phase endocytosis","termid":"PBO:0082063"}


id: PBO:0110973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4504 family protein, human C1orf74 ortholog, implicated in transcription or signalling, possibly phosphate starvation response","termid":"PBO:0110973"}


id: PATO:0001707
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality of a process inhering in a bearer by virtue of the bearer's exhibiting marked activity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioural activity","termid":"PATO:0002265"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"behavioural active","termid":"PATO:0001707"}


id: GO:0002055
data:
  {"annotated_genes":["SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74297],"is_not":false,"summary":null,"term":"GO:0002055"}]},"cv_name":"molecular_function","definition":"Binding to adenine, a purine base.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase binding","termid":"GO:0002060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"adenine binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"6-aminopurine binding","type":"exact"}],"termid":"GO:0002055","terms_by_termid":{"GO:0002055":null}}


id: GO:0030377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the urokinase plasminogen activator to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:16456079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"urokinase plasminogen activator receptor activity","secondary_identifiers":["Wikipedia:Urokinase_receptor"],"synonyms":[{"name":"U-plasminogen activator receptor activity","type":"exact"},{"name":"uPAR","type":"exact"},{"name":"urokinase plasminogen activator receptor","type":"exact"}],"termid":"GO:0030377"}


id: GO:0030866
data:
  {"annotated_genes":["SJAG_00521","SJAG_04465","SJAG_00938","SJAG_03086","SJAG_03596","SJAG_04597","SJAG_02511","SJAG_01964","SJAG_02700","SJAG_03088","SJAG_01384","SJAG_02245","SJAG_04982","SJAG_02831","SJAG_04703","SJAG_03705","SJAG_00649","SJAG_04930","SJAG_04621","SJAG_03025","SJAG_00228","SJAG_01665","SJAG_02795","SJAG_01805","SJAG_01268","SJAG_04498","SJAG_02075","SJAG_01732","SJAG_04001","SJAG_04077","SJAG_01943","SJAG_03044","SJAG_02228","SJAG_04100","SJAG_04887","SJAG_01143","SJAG_03045","SJAG_02431","SJAG_00082","SJAG_03146","SJAG_03119","SJAG_04052","SJAG_03703","SJAG_00700","SJAG_00268","SJAG_04886","SJAG_00279","SJAG_02864","SJAG_03379","SJAG_03048","SJAG_00661","SJAG_02592","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100495,118206],"is_not":false,"summary":null,"term":"GO:0030866"},{"annotations":[105482,79738,77640,103625,91013,112496,73858,103378,95135,88491,73652,98240,100005,110996,112473,100185,75592,103569],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000147"},{"annotations":[88597,98046,95622,99159,99220,105465],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044396"},{"annotations":[111110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000915"},{"annotations":[98352,98611,108442,89669],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[105468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044837"},{"annotations":[76703,75940,99223,97974,102879,118180,75289,102736,95623,112177,88601,118764,98245,112612,98049,92883,119470,92933,72899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[77783],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[95624,101021,101249,98355,102737,118181,112613,88602,97975,99224],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902404"},{"annotations":[98600],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2000432"},{"annotations":[102681],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[94749,90340],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[94151,119711],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"A 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id: FYPO:0001715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of succinate into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal succinate import","synonyms":[{"name":"abnormal succinate import across plasma membrane","type":"exact"},{"name":"abnormal succinate import during mitotic cell cycle","type":"related"},{"name":"abnormal succinate import during vegetative growth","type":"exact"},{"name":"abnormal succinate import into cell","type":"exact"},{"name":"abnormal succinate uptake","type":"exact"},{"name":"abnormal succinic acid import","type":"related"}],"termid":"FYPO:0001715"}


id: PBO:0005048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght6","termid":"PBO:0005048"}


id: PBO:0088605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding WD repeat protein, coronin Crn1","termid":"PBO:0088605"}


id: PBO:0043471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 8","termid":"PBO:0043471"}


id: GO:0044444
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic part (obsolete GO:0044444)","synonyms":[{"name":"cytoplasm component","type":"exact"}],"termid":"GO:0044444"}


id: GO:0060824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that contributes to the formation of the anterior/posterior pattern of the neural plate.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in neural plate anterior/posterior pattern formation (obsolete GO:0060824)","synonyms":[{"name":"retinoic acid receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:0060824"}


id: PBO:0028820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_reversal","termid":"PBO:0028820"}


id: MONDO:0030055
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85700],"is_not":false,"summary":null,"term":"MONDO:0030055"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244","MONDO:0006025"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1714781","DOID:0081427","OMIM:618912","UMLS:C5394466"],"synonyms":[{"name":"SORDD","type":"exact"},{"name":"sorbitol dehydrogenase deficiency","type":"exact"},{"name":"sorbitol dehydrogenase deficiency with peripheral neuropathy","type":"exact"}],"termid":"MONDO:0030055","terms_by_termid":{"MONDO:0030055":null},"xrefs":{"Monarch":{"xref_id":"0030055"}}}


id: FYPO:0000315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, and undergoes septation, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with elongated, septated germ tube","synonyms":[{"name":"inviable after spore germination, without cell division, elongated, septated cell","type":"exact"},{"name":"inviable following spore germination with elongated, septated germ tube","type":"exact"},{"name":"inviable germinated spore, without cell division, with elongated, septated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with elongated, septated germ tube","type":"exact"}],"termid":"FYPO:0000315"}


id: MONDO:0016056
data:
  {"annotated_genes":["SJAG_02737","SJAG_03617","SJAG_04699","SJAG_04259","SJAG_04070","SJAG_01293","SJAG_00773","SJAG_00768","SJAG_03161","SJAG_03891","SJAG_05245","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054593"},{"annotations":[85433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054716"},{"annotations":[86344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054761"},{"annotations":[86368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054804"},{"annotations":[86369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054806"},{"annotations":[86738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032583"},{"annotations":[86706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030339"},{"annotations":[86098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031060"},{"annotations":[86057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011488"},{"annotations":[85960,85961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859342"},{"annotations":[85612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011437"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly","termid":"MONDO:0001149"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00768":null,"SJAG_00773":null,"SJAG_01082":null,"SJAG_01293":null,"SJAG_02737":null,"SJAG_03161":null,"SJAG_03617":null,"SJAG_03891":null,"SJAG_04070":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_05245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"isolated congenital microcephaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10027534","MEDGEN:44422","Orphanet:199642","UMLS:C0025958","GARD:3603","DOID:0070297"],"synonyms":[{"name":"microcephaly, primary","type":"exact"},{"name":"primary microcephaly","type":"exact"},{"name":"true microcephaly","type":"exact"}],"termid":"MONDO:0016056","terms_by_termid":{"MONDO:0011437":null,"MONDO:0011488":null,"MONDO:0030339":null,"MONDO:0031060":null,"MONDO:0032583":null,"MONDO:0054593":null,"MONDO:0054716":null,"MONDO:0054761":null,"MONDO:0054804":null,"MONDO:0054806":null,"MONDO:0859342":null},"xrefs":{"Monarch":{"xref_id":"0016056"}}}


id: MONDO:0002449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal degeneration","termid":"MONDO:0001515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nodular degeneration of cornea","secondary_identifiers":["MEDGEN:509799","DOID:2879","ICD9:371.46","SCTID:72620002","UMLS:C0155122"],"termid":"MONDO:0002449","xrefs":{"Monarch":{"xref_id":"0002449"}}}


id: MONDO:0020805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm composed of basal cells that remains localized and does not metastasize to other anatomic sites.","definition_xrefs":["NCIT:C4743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal cell neoplasm","termid":"MONDO:0020799"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign basal cell neoplasm","secondary_identifiers":["UMLS:C0474802","MEDGEN:96885"],"synonyms":[{"name":"benign basal cell tumor","type":"exact"},{"name":"benign basal cell tumour","type":"exact"}],"termid":"MONDO:0020805","xrefs":{"Monarch":{"xref_id":"0020805"}}}


id: MONDO:0011666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete maturity-onset diabetes of the young (obsolete MONDO:0011666)","termid":"MONDO:0011666","xrefs":{"Monarch":{"xref_id":"0011666"}}}


id: MONDO:0012865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudofolliculitis barbae","secondary_identifiers":["OMIM:612318","UMLS:C0549150","ICD10CM:L73.1","MEDGEN:107807","icd11.foundation:336055701","MESH:C563016"],"synonyms":[{"name":"PFB","type":"related"},{"name":"Pseudofolliculitis barbae","type":"exact"},{"name":"ingrown hairs","type":"related"},{"name":"pili Incarnati","type":"related"},{"name":"pseudofolliculitis barbae, susceptibility to","type":"related"}],"termid":"MONDO:0012865","xrefs":{"Monarch":{"xref_id":"0012865"}}}


id: MONDO:0006620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polypoid lesion that arises from the vulva and is characterized by the presence of fibrovascular stroma lined by squamous epithelium. There is no evidence of epithelial atypia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin tag","termid":"MONDO:0004026"},{"relation_name":"is_a","term_name":"polyp of vulva","termid":"MONDO:0021396"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulva fibroepithelial polyp","secondary_identifiers":["UMLS:C1336978","MEDGEN:237054","NCIT:C6857","DOID:8255"],"synonyms":[{"name":"fibroepithelial polyp of the vulva","type":"exact"},{"name":"fibroepithelial polyp of vulva","type":"exact"},{"name":"mammalian vulva skin tag","type":"exact"},{"name":"skin tag of mammalian vulva","type":"exact"},{"name":"vulval fibroepithelial polyp","type":"exact"},{"name":"vulvar fibroepithelial polyp","type":"exact"},{"name":"vulvar fibroepithelial stromal polyp","type":"exact"}],"termid":"MONDO:0006620","xrefs":{"Monarch":{"xref_id":"0006620"}}}


id: PR:P22774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A stress-70 protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00704","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.11","secondary_identifiers":["UniProtKB:P22774"],"synonyms":[{"name":"Spom972h-HSPA9","type":"exact"}],"termid":"PR:P22774"}


id: PBO:0082105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA-peroxin; heterodimerizes with AAA-peroxin Pex6p and participates in the recycling of peroxisomal signal receptor Pex5p from the peroxisomal membrane to the cystosol; induced by oleic acid and upregulated during anaerobiosis; mutations in human PEX1 can lead to severe peroxisomal disorders and early death","termid":"PBO:0082105"}


id: PBO:0077644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 1","termid":"PBO:0077644"}


id: MOD:01031
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethylbenzyl","synonyms":[{"name":"diMeBzl","type":"exact"}],"termid":"MOD:01031"}


id: PBO:0057245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 449b","termid":"PBO:0057245"}


id: GO:2000779
data:
  {"annotated_genes":["SJAG_00369","SJAG_04457","SJAG_02104","SJAG_01205","SJAG_00823","SJAG_03417","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73024,91251],"is_not":false,"summary":null,"term":"GO:2000779"},{"annotations":[102679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[110491,94225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000781"},{"annotations":[107717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[109626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of double-strand break repair.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA repair","termid":"GO:0006282"},{"relation_name":"regulates","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00823":null,"SJAG_01205":null,"SJAG_02104":null,"SJAG_03048":null,"SJAG_03417":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"regulation of double-strand break repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:2000779","terms_by_termid":{"GO:0010569":null,"GO:2000779":null,"GO:2000781":null,"GO:2001033":null,"GO:2001034":null}}


id: MONDO:0003846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Viral infection of the esophagus. It often occurs in immunocompromised patients and it is caused by cytomegalovirus or herpes simplex virus. Symptoms include pain on swallowing, fever, and retrosternal burning.","definition_xrefs":["NCIT:C27108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagitis","termid":"MONDO:0001409"},{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"viral esophagitis","secondary_identifiers":["DOID:6297","MEDGEN:87414","UMLS:C0341110","SCTID:235603003"],"synonyms":[{"name":"Viruses caused esophagitis (disease)","type":"exact"},{"name":"Viruses esophagitis (disease)","type":"exact"},{"name":"viral esophagitis","type":"exact"}],"termid":"MONDO:0003846","xrefs":{"Monarch":{"xref_id":"0003846"}}}


id: GO:0035122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the medial fin are generated and organized. Medial fins are unpaired fins of fish, usually located dorsomedially or ventromedially and primarily used for stability while swimming.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic appendage morphogenesis","termid":"GO:0035113"},{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic medial fin morphogenesis","synonyms":[{"name":"embryonic unpaired fin morphogenesis","type":"exact"}],"termid":"GO:0035122"}


id: MONDO:0006283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of large cell lung carcinoma characterized by the presence of a syncytial growth pattern, large vesicular nuclei with esophnophilic nucleoi, and dense lymphoplasmacytic infiltration.","definition_xrefs":["NCIT:C45519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung large cell carcinoma","termid":"MONDO:0003050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lymphoepithelioma-like lung carcinoma","secondary_identifiers":["UMLS:C1708792","EFO:1000340","MEDGEN:313374","ONCOTREE:LECLC"],"synonyms":[{"name":"lymphoepithelioma-like carcinoma of the lung","type":"related"}],"termid":"MONDO:0006283","xrefs":{"Monarch":{"xref_id":"0006283"}}}


id: PBO:0043673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORO1A antisense RNA 1","termid":"PBO:0043673"}


id: PBO:0044952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotate dehydrogenase (quinone)","termid":"PBO:0044952"}


id: MONDO:0015574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic cutaneous lupus erythematosus (CCLE) is a form of cutaneous lupus erythematosus (CLE) that includes five different forms: discoid lupus erythematosus (DLE), chilblain lupus, hypertrophic or verrucous lupus erythematosus, lupus erythematosus tumidus, and lupus erythematosus panniculitis.","definition_xrefs":["Orphanet:163531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous lupus erythematosus","termid":"MONDO:0005282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"chronic cutaneous lupus erythematosus","secondary_identifiers":["GARD:20043","icd11.foundation:1849568465","MedDRA:10057929"],"synonyms":[{"name":"cutaneous lupus erythematosus, chronic","type":"exact"}],"termid":"MONDO:0015574","xrefs":{"Monarch":{"xref_id":"0015574"}}}


id: PBO:0073424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SF1 divergent transcript","termid":"PBO:0073424"}


id: PATO:0000065
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000065 relative percentage (obsolete PATO:0000065)","termid":"PATO:0000065"}


id: PBO:0074756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 115","termid":"PBO:0074756"}


id: GO:0019114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: catechol + O2 = a muconate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete catechol dioxygenase activity (obsolete GO:0019114)","termid":"GO:0019114"}


id: GO:0019107
data:
  {"annotated_genes":["SJAG_00102"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004379"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a myristoyl (CH3-[CH2]12-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00102":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"myristoyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-162914","Reactome:R-HSA-141367"],"termid":"GO:0019107","terms_by_termid":{"GO:0004379":null}}


id: PBO:0049834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDHD5 antisense RNA 1","termid":"PBO:0049834"}


id: MONDO:0003416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemoglobin E disease (obsolete MONDO:0003416)","termid":"MONDO:0003416","xrefs":{"Monarch":{"xref_id":"0003416"}}}


id: GO:0004044
data:
  {"annotated_genes":["SJAG_01661"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72795],"is_not":false,"summary":null,"term":"GO:0004044"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-beta-D-ribosylamine + L-glutamate + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + L-glutamine + H2O.","definition_xrefs":["EC:2.4.2.14","RHEA:14905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01661":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"amidophosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01072","MetaCyc:PRPPAMIDOTRANS-RXN","Reactome:R-HSA-73815"],"synonyms":[{"name":"5'-phosphoribosylpyrophosphate amidotransferase activity","type":"related"},{"name":"5-phosphoribosyl-1-pyrophosphate amidotransferase activity","type":"related"},{"name":"5-phosphoribosylamine:diphosphate phospho-alpha-D-ribosyltransferase (glutamate-amidating)","type":"related"},{"name":"5-phosphororibosyl-1-pyrophosphate amidotransferase activity","type":"related"},{"name":"alpha-5-phosphoribosyl-1-pyrophosphate amidotransferase activity","type":"related"},{"name":"glutamine 5-phosphoribosylpyrophosphate amidotransferase activity","type":"related"},{"name":"glutamine phosphoribosyldiphosphate amidotransferase activity","type":"related"},{"name":"glutamine phosphoribosylpyrophosphate amidotransferase activity","type":"related"},{"name":"glutamine ribosylpyrophosphate 5-phosphate amidotransferase activity","type":"related"},{"name":"phosphoribose pyrophosphate amidotransferase activity","type":"related"},{"name":"phosphoribosyl pyrophosphate amidotransferase activity","type":"related"},{"name":"phosphoribosyldiphosphate 5-amidotransferase activity","type":"related"},{"name":"phosphoribosylpyrophosphate glutamyl amidotransferase activity","type":"related"}],"termid":"GO:0004044","terms_by_termid":{"GO:0004044":null}}


id: PBO:0057540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 656","termid":"PBO:0057540"}


id: GO:1901367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-cysteine stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-cysteine","termid":"GO:1901367"}


id: GO:0020010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spiral cytoskeletal structure located at the apical end of the apical complex in some apicomplexan parasites. Fibers form a left-handed spiral, and are comprised of tubulin protofilaments organized in a ribbon-like structure that differs from the conventional tubular structure characteristic of microtubules.","definition_xrefs":["GOC:expert_dr","PMID:11901169","PMID:16518471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"conoid","termid":"GO:0020010"}


id: MONDO:0018274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GM3 synthase deficiency is characterized by recurrent seizures (epilepsy) and problems with brain development. Within the first few weeks after birth, affected infants become irritable and develop feeding difficulties and vomiting that prevent them from growing and gaining weight at the usual rate. Seizures begin within the first year of life and worsen over time. Multiple types of seizures are possible, including generalized tonic-clonic seizures (also known as grand mal seizures), which cause muscle rigidity, convulsions, and loss of consciousness. Some affected children also experience prolonged episodes of seizure activity called nonconvulsive status epilepticus. The seizures associated with GM3 synthase deficiency tend to be resistant (refractory) to treatment with antiseizure medications.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"skin pigmentation disorder","termid":"MONDO:0019288"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0006025","MONDO:0024322"],"is_obsolete":false,"name":"GM3 synthase deficiency","secondary_identifiers":["MEDGEN:323005","OMIM:609056","Orphanet:171714","SCTID:722762005","DOID:0060470","UMLS:C1836824","Orphanet:370938","GARD:12059","Orphanet:370933"],"synonyms":[{"name":"Amish infantile epilepsy syndrome","type":"exact"},{"name":"GM3 synthase deficiency","type":"exact"},{"name":"SPDRS","type":"exact"},{"name":"ST3GAL5-CDG","type":"exact"},{"name":"disorder of lactosylceramide alpha-2,3-sialyltransferase activity","type":"exact"},{"name":"epilepsy syndrome, infantile-onset symptomatic","type":"exact"},{"name":"infantile-onset symptomatic epilepsy syndrome - developmental stagnation - blindness","type":"exact"},{"name":"infantile-onset symptomatic epilepsy syndrome-developmental stagnation-blindness syndrome","type":"exact"},{"name":"lactosylceramide alpha-2,3-sialyltransferase activity disease","type":"exact"},{"name":"salt & pepper syndrome","type":"exact"},{"name":"salt and pepper developmental regression syndrome","type":"exact"},{"name":"salt and pepper mental retardation syndrome","type":"related"},{"name":"salt-and-pepper syndrome","type":"exact"}],"termid":"MONDO:0018274","xrefs":{"Monarch":{"xref_id":"0018274"}}}


id: PBO:0030177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_3'-5'-exoribonuclease_activity","termid":"PBO:0030177"}


id: GO:0032428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-beta-D-galactosaminides.","definition_xrefs":["EC:3.2.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-N-acetylhexosaminidase activity","termid":"GO:0004563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-N-acetylgalactosaminidase activity","secondary_identifiers":["MetaCyc:3.2.1.53-RXN"],"termid":"GO:0032428"}


id: PBO:0046445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythropoietin","termid":"PBO:0046445"}


id: MOD:01500
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["Unimod:214#N-term","OMSSA:173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated N-terminal","termid":"MOD:01711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ116nterm","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01500"}


id: PBO:0072387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 13","termid":"PBO:0072387"}


id: GO:0002604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic cell antigen processing and presentation","termid":"GO:0002604"}


id: GO:1905648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shell calcification.","definition_xrefs":["PMID:14648763","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biomineral tissue development","termid":"GO:0070167"},{"relation_name":"regulates","term_name":"shell calcification","termid":"GO:0031215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shell calcification","termid":"GO:1905648"}


id: PBO:0054673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2079","termid":"PBO:0054673"}


id: PBO:0091178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methionine-tRNA ligase Msm1","termid":"PBO:0091178"}


id: GO:0009830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the breakdown of the cell wall that contributes to the process of abscission.","definition_xrefs":["GOC:dph","GOC:lr","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall modification","termid":"GO:0009827"},{"relation_name":"is_a","term_name":"cell wall disassembly","termid":"GO:0044277"},{"relation_name":"part_of","term_name":"abscission","termid":"GO:0009838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall modification involved in abscission","synonyms":[{"name":"cell wall modification during abscission","type":"related"}],"termid":"GO:0009830"}


id: PBO:0043564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL6A2 divergent transcript","termid":"PBO:0043564"}


id: GO:0048540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the bursa of Fabricius over time, from its formation to the mature structure. The bursa of Fabricius is an organ found in birds involved in B cell differentiation.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bursa of Fabricius development","termid":"GO:0048540"}


id: PBO:0070258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear 3, pseudogene","termid":"PBO:0070258"}


id: PBO:0061292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal PAS domain protein 3","termid":"PBO:0061292"}


id: PBO:0080247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 10 pseudogene","termid":"PBO:0080247"}


id: PBO:0027040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_mitotically_up-regulated_genes","termid":"PBO:0027040"}


id: PBO:0002666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress activated MAP kinase interacting protein Sin1","termid":"PBO:0002666"}


id: PBO:0049228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 2","termid":"PBO:0049228"}


id: PBO:0073769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 2","termid":"PBO:0073769"}


id: PBO:0077202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 4 L six family member 19","termid":"PBO:0077202"}


id: PBO:0065166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein interacting with cyclin A1","termid":"PBO:0065166"}


id: MONDO:0002520
data:
  {"annotated_genes":["SJAG_01841","SJAG_02896","SJAG_04109","SJAG_04944","SJAG_02876","SJAG_03961","SJAG_01372"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008294"},{"annotations":[86070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[86221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007369"},{"annotations":[85815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013000"},{"annotations":[85507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"},{"annotations":[86089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008297"},{"annotations":[86734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957577"},{"annotations":[87072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010420"}]},"cv_name":"mondo","definition":"A group of metabolic diseases due to deficiency of one of a number of liver enzymes in the biosynthetic pathway of heme. They are characterized by the accumulation and increased excretion of porphyrins or its precursors. Clinical features include neurological symptoms (porphyria, acute intermittent), cutaneous lesions due to photosensitivity (porphyria cutanea tarda), or both (hereditary coproporphyria). Hepatic porphyrias can be hereditary or acquired as a result of toxicity to the hepatic tissues.","definition_xrefs":["MESH:D017094"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare hereditary metabolic disease with peripheral neuropathy (obsolete MONDO:0016133)","termid":"MONDO:0016133"},{"relation_name":"excluded_subClassOf","term_name":"inherited porphyria","termid":"MONDO:0019142"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic skin disease (obsolete MONDO:0024255)","termid":"MONDO:0024255"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"porphyria","termid":"MONDO:0037939"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01372":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"hepatic porphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:3133","GTR:AN0932921","MEDGEN:58119","SCTID:55056006","Orphanet:659694","UMLS:C0162533","GARD:19255"],"synonyms":[{"name":"ALAD deficiency","type":"exact"},{"name":"Delta-aminolevulinate dehydratase deficiency","type":"exact"},{"name":"acute hepatic porphyria","type":"narrow"},{"name":"acute porphyria","type":"related"},{"name":"hepatic Porphyrias","type":"related"},{"name":"hepatic porphyria","type":"exact"},{"name":"liver porphyria","type":"exact"},{"name":"porphobilinogen synthase deficiency","type":"exact"},{"name":"porphyria of liver","type":"exact"},{"name":"porphyria, hepatic","type":"related"}],"termid":"MONDO:0002520","terms_by_termid":{"MONDO:0007369":null,"MONDO:0008294":null,"MONDO:0008296":null,"MONDO:0008297":null,"MONDO:0008319":null,"MONDO:0010420":null,"MONDO:0013000":null,"MONDO:0957577":null},"xrefs":{"Monarch":{"xref_id":"0002520"}}}


id: MONDO:0011232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial or sporadic hemiplegic migraine in which the cause of the disease is a mutation in the ATP1A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemiplegic migraine","termid":"MONDO:0000700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine, familial hemiplegic, 2","secondary_identifiers":["DOID:0111182","MEDGEN:355962","OMIM:602481","GARD:10095","UMLS:C1865322"],"synonyms":[{"name":"ATP1A2 familial or sporadic hemiplegic migraine","type":"exact"},{"name":"FHM2","type":"related"},{"name":"Mhp2","type":"related"},{"name":"familial hemiplegic migraine type 2","type":"related"},{"name":"familial or sporadic hemiplegic migraine caused by mutation in ATP1A2","type":"exact"},{"name":"hemiplegic migraine, familial type 2","type":"related"},{"name":"migraine, familial basilar","type":"related"},{"name":"migraine, familial hemiplegic, 2","type":"exact"},{"name":"migraine, familial hemiplegic, type 2","type":"exact"}],"termid":"MONDO:0011232","xrefs":{"Monarch":{"xref_id":"0011232"}}}


id: PATO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that is the distance between the end of the inserted object and the surface of the object into which it penetrates.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distance","termid":"PATO:0000040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion depth","termid":"PATO:0002207"}


id: PBO:0073869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 5","termid":"PBO:0073869"}


id: PBO:0039120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIDA pseudogene 3","termid":"PBO:0039120"}


id: MONDO:0027069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial proton-transporting ATP synthase complex deficiency","termid":"MONDO:0014471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 5 (ATP synthase) deficiency, mitochondrial type 1","secondary_identifiers":["OMIM:500015","MEDGEN:477315","DOID:0111748","UMLS:C3275684"],"synonyms":[{"name":"MC5DM1","type":"exact"},{"name":"mitochondrial complex V (ATP synthase) deficiency, mitochondrial type 1","type":"exact"}],"termid":"MONDO:0027069","xrefs":{"Monarch":{"xref_id":"0027069"}}}


id: PBO:0079474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twist family bHLH transcription factor 2","termid":"PBO:0079474"}


id: PBO:0048161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 6","termid":"PBO:0048161"}


id: GO:0003810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutaminyl-[protein] + L-lysyl-[protein] = [protein]-L-lysyl-N(6)-5-L-glutamyl-[protein] + NH4+. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links.","definition_xrefs":["EC:2.3.2.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-glutamine gamma-glutamyltransferase activity","secondary_identifiers":["MetaCyc:2.3.2.13-RXN","RHEA:54816","Reactome:R-HSA-140851","Reactome:R-HSA-6810894","RESID:AA0124"],"synonyms":[{"name":"R-glutaminyl-peptide:amine gamma-glutamyl transferase activity","type":"related"},{"name":"TGase activity","type":"exact"},{"name":"factor XIIIa","type":"related"},{"name":"fibrin stabilizing factor","type":"related"},{"name":"fibrinoligase activity","type":"exact"},{"name":"glutaminylpeptide gamma-glutamyltransferase activity","type":"related"},{"name":"polyamine transglutaminase activity","type":"related"},{"name":"protein-glutamine:amine gamma-glutamyltransferase","type":"related"},{"name":"tissue transglutaminase","type":"narrow"},{"name":"transglutaminase activity","type":"exact"}],"termid":"GO:0003810"}


id: PBO:0078298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-3","termid":"PBO:0078298"}


id: FYPO:0002166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which polynucleotide 3'-phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal polynucleotide 3'-phosphatase activity","termid":"FYPO:0002165"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished polynucleotide 3'-phosphatase activity","synonyms":[{"name":"polynucleotide 3'-phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0002166"}


id: GO:0140674
data:
  {"annotated_genes":["SJAG_02571","SJAG_02698","SJAG_04692","SJAG_02906","SJAG_00925"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113391],"is_not":false,"summary":null,"term":"GO:0140674"},{"annotations":[88327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[94951,96783,103878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"}]},"cv_name":"molecular_function","definition":"Binding to and carrying a histone or a histone complex to unload or deposit it as a nucleosome, driven by ATP hydrolysis.","definition_xrefs":["PMID:26459557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"ATP-dependent chromatin remodeler activity","termid":"GO:0140658"},{"relation_name":"is_a","term_name":"histone chaperone activity","termid":"GO:0140713"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00925":null,"SJAG_02571":null,"SJAG_02698":null,"SJAG_02906":null,"SJAG_04692":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140104","GO:0140096","GO:0003674","GO:0140097","GO:0140597","GO:0003824"],"is_obsolete":false,"name":"ATP-dependent histone chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0140675"],"synonyms":[{"name":"ATP-dependent histone loader activity","type":"narrow"},{"name":"ATP-dependent histone unloader activity","type":"narrow"},{"name":"histone loader activity","type":"narrow"},{"name":"histone loading activity","type":"narrow"},{"name":"histone unloader activity","type":"narrow"},{"name":"histone unloading activity","type":"narrow"},{"name":"nucleosome remodeling activity","type":"related"}],"termid":"GO:0140674","terms_by_termid":{"GO:0140665":null,"GO:0140674":null,"GO:0140849":null}}


id: PBO:0050908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 1","termid":"PBO:0050908"}


id: PATO:0002090
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a tumour by virtue of the bearer's exhbiting the morphological characteristics of a glandular epithelial cell.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenomatous","termid":"PATO:0002090"}


id: PBO:0086347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PtdIns-3-P binding protein that tethers the ER to vacuoles at NVJs; anchored in the ER membrane at nucleus-vacuole junctions and binds phosphatidylinositol 3-phosphate (PtdIns-3-P) in the vacuolar membrane via its Phox homology (PX) domain; expressed predominantly in late G1 to early S phase of the cell cycle; mutation affects nuclear and mitochondrial transmission to daughter buds; similar to 4 human genes, one of which (SNX14) is associated with neurological disease","termid":"PBO:0086347"}


id: PBO:0111332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L7-like protein involved in ribosome biogenesis","termid":"PBO:0111332"}


id: MONDO:0005452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent episodes of binge-eating over which the individual feels a lack of control; these episodes of binge-eating are followed by recurrent compensatory behavior to prevent weight gain, usually self-induced vomiting. In addition, self-evaluation is unduly influenced by body image.","definition_xrefs":["NCIT:C34440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eating disorder","termid":"MONDO:0005451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bulimia nervosa","secondary_identifiers":["NCIT:C97162","EFO:0005204","ICD9:307.51","ICD10CM:F50.2","MEDGEN:389218","SCTID:78004001","DOID:12129","icd11.foundation:509381842","MESH:D002032","MESH:D052018","UMLS:C2267227"],"synonyms":[{"name":"bulimia","type":"exact"},{"name":"hyperorexia nervosa","type":"exact"}],"termid":"MONDO:0005452","xrefs":{"Monarch":{"xref_id":"0005452"}}}


id: GO:0044249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular biosynthetic process (obsolete GO:0044249)","synonyms":[{"name":"cellular anabolism","type":"exact"},{"name":"cellular biosynthesis","type":"exact"},{"name":"cellular formation","type":"exact"},{"name":"cellular synthesis","type":"exact"}],"termid":"GO:0044249"}


id: FYPO:0001075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing papulacandin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0002057","FYPO:0000257","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on papulacandin B","synonyms":[{"name":"normal cell population growth in presence of papulacandin B","type":"exact"},{"name":"normal cell population growth on papulacandin B","type":"exact"},{"name":"normal cellular response to papulacandin B","type":"related"},{"name":"normal vegetative cell population growth on papulacandin B","type":"exact"}],"termid":"FYPO:0001075"}


id: PBO:0041513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15 putative open reading frame 32","termid":"PBO:0041513"}


id: PBO:0039747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein N, pseudogene","termid":"PBO:0039747"}


id: MONDO:0017293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete small cell carcinoma of the bladder (obsolete MONDO:0017293)","termid":"MONDO:0017293","xrefs":{"Monarch":{"xref_id":"0017293"}}}


id: PBO:0055993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limbic system associated membrane protein","termid":"PBO:0055993"}


id: GO:0015410
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108979],"is_not":false,"summary":null,"term":"GO:0015410"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Mn2+(out) = ADP + phosphate + Mn2+(in).","definition_xrefs":["RHEA:17365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type manganese transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:7.2.2.5","Reactome:R-HSA-5692462","MetaCyc:3.6.3.35-RXN"],"synonyms":[{"name":"ABC-type Mn(2+) transporter","type":"related"},{"name":"ATP-dependent manganese transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled manganese transmembrane transporter activity","type":"related"},{"name":"manganese ABC transporter","type":"narrow"},{"name":"manganese transmembrane transporter activity, phosphorylative mechanism","type":"related"},{"name":"manganese-transporting ATPase activity","type":"related"}],"termid":"GO:0015410","terms_by_termid":{"GO:0015410":null}}


id: PBO:0045837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 27","termid":"PBO:0045837"}


id: PBO:0089904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThiJ domain protein, implicated in cellular detoxification","termid":"PBO:0089904"}


id: MONDO:0011108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Stüve-Wiedemann syndrome (obsolete MONDO:0011108)","termid":"MONDO:0011108","xrefs":{"Monarch":{"xref_id":"0011108"}}}


id: MONDO:0035876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"belinostat toxicity or dose selection","secondary_identifiers":["Orphanet:574671"],"termid":"MONDO:0035876","xrefs":{"Monarch":{"xref_id":"0035876"}}}


id: PBO:0086481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial transport protein; null mutant is viable, exhibits decreased levels of chitin and normal resistance to calcofluor white","termid":"PBO:0086481"}


id: GO:0005956
data:
  {"annotated_genes":["SJAG_03931","SJAG_00142","SJAG_01799"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74412,76394,78477],"is_not":false,"summary":null,"term":"GO:0005956"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses protein serine/threonine kinase activity, and contains two catalytic alpha subunits and two regulatory beta subunits. Protein kinase CK2 complexes are found in nearly every subcellular compartment, and can phosphorylate many protein substrates in addition to casein.","definition_xrefs":["GOC:mah","PMID:10994779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_01799":null,"SJAG_03931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein kinase CK2 complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"casein kinase II complex","type":"exact"}],"termid":"GO:0005956","terms_by_termid":{"GO:0005956":null}}


id: PR:Q9USR7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3801 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USR7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L38-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.02","synonyms":[{"name":"Spom972h-rpl3801","type":"exact"}],"termid":"PR:Q9USR7"}


id: PBO:0034644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_upon_nitrogen_starvation","termid":"PBO:0034644"}


id: PBO:0001240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bos1 (predicted)","termid":"PBO:0001240"}


id: MONDO:0040699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe form of scleritis with subtypes: necrotising zonal granulomatous inflammation, diffuse non-granulomatous chronic inflammation, mixed pattern of acute purulent inflammation mixed with granulomatous inflammation and sarcoidal pattern.","direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"necrotizing scleritis","secondary_identifiers":["UMLS:C0027547","MEDGEN:6542","SCTID:95797003","ICD9:379.09"],"termid":"MONDO:0040699","xrefs":{"Monarch":{"xref_id":"0040699"}}}


id: PBO:0051339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-14 (pseudogene)","termid":"PBO:0051339"}


id: PBO:0003869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transporting ATPase Ccc2 (predicted)","termid":"PBO:0003869"}


id: GO:0110149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of biomineralization, the formation and deposition of mineral crystals by living organisms.","definition_xrefs":["PMID:22992051"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of biomineralization (obsolete GO:0110149)","synonyms":[{"name":"regulation of biomineral formation","type":"narrow"},{"name":"regulation of biomineralisation","type":"exact"},{"name":"regulation of mineralisation","type":"exact"},{"name":"regulation of mineralization","type":"exact"}],"termid":"GO:0110149"}


id: GO:0004108
data:
  {"annotated_genes":["SJAG_01922"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74674],"is_not":false,"summary":null,"term":"GO:0004108"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + H2O + oxaloacetate = citrate + CoA, where the acetyl group is added to the si-face of oxaloacetate; acetyl-CoA thus provides the two carbon atoms of the pro-S carboxymethyl group.","definition_xrefs":["EC:2.3.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrate synthase activity","termid":"GO:0036440"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"citrate (Si)-synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70975"],"synonyms":[{"name":"(R)-citric synthase activity","type":"related"},{"name":"acetyl-CoA:oxaloacetate C-acetyltransferase [thioester-hydrolysing, (pro-S)-carboxymethyl forming]","type":"related"},{"name":"citrate condensing enzyme activity","type":"related"},{"name":"citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO(-)->acetyl-CoA) activity","type":"related"},{"name":"citrate oxaloacetate-lyase ((pro-3S)-CH2COO-rightacetyl-CoA)","type":"related"},{"name":"citrate oxaloacetate-lyase [(pro-3S)-CH2COOrightacetyl-CoA]","type":"related"},{"name":"citrate oxaloacetate-lyase, CoA-acetylating activity","type":"related"},{"name":"citrate synthase activity","type":"broad"},{"name":"citrate synthetase activity","type":"related"},{"name":"citric synthase activity","type":"related"},{"name":"citric-condensing enzyme activity","type":"related"},{"name":"citrogenase activity","type":"related"},{"name":"condensing enzyme activity","type":"broad"},{"name":"oxalacetic transacetase activity","type":"related"},{"name":"oxaloacetate transacetase activity","type":"related"}],"termid":"GO:0004108","terms_by_termid":{"GO:0004108":null}}


id: MONDO:0013974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pure hair and nail ectodermal dysplasia","termid":"MONDO:0019071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 6, hair/nail type","secondary_identifiers":["UMLS:C3554111","OMIM:614928","DOID:0111659","MEDGEN:767025","GARD:18064"],"synonyms":[{"name":"ECTD6","type":"exact"},{"name":"ectodermal dysplasia 6, hair/nail type","type":"exact"}],"termid":"MONDO:0013974","xrefs":{"Monarch":{"xref_id":"0013974"}}}


id: GO:0019715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-aspartic acid to form peptidyl-L-erythro-beta-hydroxyaspartic acid; catalyzed by peptide-aspartate beta-dioxygenase (EC:1.14.11.16).","definition_xrefs":["RESID:AA0027"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-aspartic acid hydroxylation to form L-erythro-beta-hydroxyaspartic acid (obsolete GO:0019715)","termid":"GO:0019715"}


id: GO:0019920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of internal peptidyl-1-thioglycine, which has an internal C=S bond, instead of an internal C=O bond, in the peptide.","definition_xrefs":["GOC:go_curators","PMID:10660523","RESID:AA0265"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-1-thioglycine biosynthetic process, internal (obsolete GO:0019920)","synonyms":[{"name":"peptidyl-1-thioglycine anabolism, internal","type":"exact"},{"name":"peptidyl-1-thioglycine formation, internal","type":"exact"},{"name":"peptidyl-1-thioglycine synthesis, internal","type":"exact"}],"termid":"GO:0019920"}


id: FYPO:0000972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal.","definition_xrefs":["PMID:22064477","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"},{"relation_name":"is_a","term_name":"increased number of Rad52 foci","termid":"FYPO:0004709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci during vegetative growth","synonyms":[{"name":"increased number of Rad22 foci during vegetative growth","type":"exact"},{"name":"increased number of Rad52 foci during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000972"}


id: MONDO:0007633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Friedreich ataxia, so-called, with optic atrophy and sensorineural deafness","secondary_identifiers":["MEDGEN:376920","UMLS:C1850982","MESH:C564999","OMIM:136600"],"synonyms":[{"name":"Friedreich ataxia, so-called, with optic atrophy and sensorineural deafness","type":"exact"}],"termid":"MONDO:0007633","xrefs":{"Monarch":{"xref_id":"0007633"}}}


id: MONDO:0015945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Polymalformative genetic syndrome with increased risk of developing cancer (PGSIRC) comprises a wide range of syndromes characterized by congenital malformations with a high risk of developing tumors including up to 50 different rare diseases.","definition_xrefs":["Orphanet:183422"],"gene_count":0,"genotype_count":0,"name":"obsolete polymalformative genetic syndrome with increased risk of developing cancer (obsolete MONDO:0015945)","synonyms":[{"name":"PGSIRC","type":"exact"}],"termid":"MONDO:0015945","xrefs":{"Monarch":{"xref_id":"0015945"}}}


id: FYECO:0000095
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Recovery from nitrogen starvation: cells are first grown in minimal medium containing no nitrogen for 24-48h. This medium is then replaced with rich medium containing nitrogen and cells allowed to grow for 4-7 days.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen starvation and recovery","termid":"FYECO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"24-48h nitrogen starvation followed by 4-7 day recovery in rich medium","termid":"FYECO:0000095"}


id: GO:1901012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (S)-reticuline.","definition_xrefs":["PMID:22725256","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzyl isoquinoline alkaloid biosynthetic process","termid":"GO:0009708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(S)-reticuline biosynthetic process","synonyms":[{"name":"(S)-reticuline anabolism","type":"exact"},{"name":"(S)-reticuline biosynthesis","type":"exact"},{"name":"(S)-reticuline formation","type":"exact"},{"name":"(S)-reticuline synthesis","type":"exact"}],"termid":"GO:1901012"}


id: PBO:0046322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1 pseudogene 3","termid":"PBO:0046322"}


id: PBO:0008178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein Sls1 (predicted)","termid":"PBO:0008178"}


id: PBO:0041829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 2","termid":"PBO:0041829"}


id: PBO:0048960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein V platelet","termid":"PBO:0048960"}


id: MONDO:0019330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pili gemini defines a situation where the papilla's tip of a hair follicle splits during the anagen phase and consequently grows two hair shafts emerging through a single pilary canal. A papilla tip that divides in several tips will produce several hair shafts, a situation named pili multigemini. Pili gemini or multigemini can occur in each type of hair.","definition_xrefs":["Orphanet:79492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair anomaly","termid":"MONDO:0019278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pili gemini","secondary_identifiers":["SCTID:42829009","GARD:19026","UMLS:C0019571","ICD9:704.8","MEDGEN:42460","MESH:C537188"],"synonyms":[{"name":"pili multigemini","type":"exact"}],"termid":"MONDO:0019330","xrefs":{"Monarch":{"xref_id":"0019330"}}}


id: PBO:0034519
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_elongated_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034519"}


id: PBO:0031222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_heat","termid":"PBO:0031222"}


id: GO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any B cell selection process that occurs in the periphery.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell selection","termid":"GO:0002339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral B cell selection","synonyms":[{"name":"peripheral B lymphocyte selection","type":"exact"},{"name":"peripheral B-cell selection","type":"exact"},{"name":"peripheral B-lymphocyte selection","type":"exact"}],"termid":"GO:0002343"}


id: GO:0009226
data:
  {"annotated_genes":["SJAG_01443","SJAG_02951","SJAG_02648","SJAG_04728","SJAG_02783","SJAG_03188","SJAG_00890","SJAG_01784","SJAG_03723","SJAG_00978","SJAG_03818","SJAG_00519","SJAG_02954"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75825,103401,68586,78359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009298"},{"annotations":[114026,114019,114027,109898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052574"},{"annotations":[76942,71394,67561,72320,58183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006048"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nucleotide-sugars, any nucleotide-carbohydrate in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_00890":null,"SJAG_00978":null,"SJAG_01443":null,"SJAG_01784":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03188":null,"SJAG_03723":null,"SJAG_03818":null,"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nucleotide-sugar biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-173599"],"synonyms":[{"name":"nucleotide-sugar anabolism","type":"exact"},{"name":"nucleotide-sugar biosynthesis","type":"exact"},{"name":"nucleotide-sugar formation","type":"exact"},{"name":"nucleotide-sugar synthesis","type":"exact"}],"termid":"GO:0009226","terms_by_termid":{"GO:0006048":null,"GO:0009298":null,"GO:0052574":null}}


id: PBO:0044828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 115","termid":"PBO:0044828"}


id: PBO:0087066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L32; overexpression disrupts telomeric silencing; homologous to mammalian ribosomal protein L32, no bacterial homolog","termid":"PBO:0087066"}


id: PBO:0078225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 11-3","termid":"PBO:0078225"}


id: PBO:0069323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 581, pseudogene","termid":"PBO:0069323"}


id: PBO:0034166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-axon_synapses_in","termid":"PBO:0034166"}


id: PBO:0000985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase (predicted)","termid":"PBO:0000985"}


id: MONDO:1012150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, non-human animal","termid":"MONDO:1011713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, cattle","secondary_identifiers":["OMIA:000621-9913"],"termid":"MONDO:1012150","xrefs":{"Monarch":{"xref_id":"1012150"}}}


id: PBO:0002683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF423 protein","termid":"PBO:0002683"}


id: PBO:0051076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 6-13","termid":"PBO:0051076"}


id: GO:0072293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules arranged along the proximal/distal axis of the metanephric nephron acquire their identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"is_a","term_name":"pattern specification involved in metanephros development","termid":"GO:0072268"},{"relation_name":"part_of","term_name":"proximal/distal pattern formation involved in metanephric nephron development","termid":"GO:0072272"},{"relation_name":"part_of","term_name":"metanephric nephron tubule formation","termid":"GO:0072289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"}


id: PBO:0089951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA ligase Mse1","termid":"PBO:0089951"}


id: GO:0052399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of programmed cell death in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont programmed cell death (obsolete GO:0052399)","synonyms":[{"name":"activation by organism of symbiont programmed cell death","type":"exact"},{"name":"induction by organism of symbiont programmed cell death","type":"exact"}],"termid":"GO:0052399"}


id: MONDO:0019639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital megacalycosis is a rare renal malformation, characterized by non-obstructive dilation of the renal calyces as well as an increased calyceal number (12-20), with a normal renal pelvis, ureter, and bladder. It may be unilateral or bilateral and is usually asymptomatic unless complicated by nephrolithiasis and urinary tract infection.","definition_xrefs":["Orphanet:93109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital megacalycosis","secondary_identifiers":["icd11.foundation:954627950","NANDO:2200177","ICD9:753.3","SCTID:85901000","GARD:19174","MEDGEN:1782490","UMLS:C5545379"],"termid":"MONDO:0019639","xrefs":{"Monarch":{"xref_id":"0019639"}}}


id: MONDO:0018758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Familial patent arterial duct is a rare, genetic, non-syndromic, congenital anomaly of the great arteries characterized by the presence of an isolated patent arterial duct (PDA) (i.e. failure of closure of ductus arteriosis after birth) in several members of the same family. Clinical presentation is similar to the sporadic form and may range from neonatal-onset tachypnea, diaphoresis and failure to thrive to adult-onset atrial arrhythmia, signs and symptoms of heart failure and cyanosis limited to the lower extremities.","definition_xrefs":["Orphanet:466729"],"gene_count":0,"genotype_count":0,"name":"obsolete familial patent arterial duct (obsolete MONDO:0018758)","termid":"MONDO:0018758","xrefs":{"Monarch":{"xref_id":"0018758"}}}


id: FYPO:0004278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of uracil DNA N-glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal uracil DNA N-glycosylase activity","termid":"FYPO:0004277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased uracil DNA N-glycosylase activity","synonyms":[{"name":"reduced uracil DNA N-glycosylase activity","type":"exact"}],"termid":"FYPO:0004278"}


id: GO:0006104
data:
  {"annotated_genes":["SJAG_01524","SJAG_03813"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72107,90257],"is_not":false,"summary":null,"term":"GO:0006104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving succinyl-CoA, a compound composed of the monovalent acyl group 3-carboxypropanoyl, derived from succinic acid by loss of one OH group, linked to coenzyme A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086","GO:0006790"],"is_obsolete":false,"name":"succinyl-CoA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"succinyl-CoA metabolism","type":"exact"}],"termid":"GO:0006104","terms_by_termid":{"GO:0006104":null}}


id: PBO:0066745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 43","termid":"PBO:0066745"}


id: GO:0000294
data:
  {"annotated_genes":["SJAG_03234","SJAG_03952"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73930,105092],"is_not":false,"summary":null,"term":"GO:0000294"}]},"cv_name":"biological_process","definition":"A minor MRP-dependent nuclear-transcribed mRNA degradation pathway that begins with an endonucleolytic cleavage to generate unprotected ends.","definition_xrefs":["PMID:14729943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03234":null,"SJAG_03952":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, RNase MRP-dependent","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear mRNA catabolic process, endonucleolytic cleavage-dependent decay","type":"exact"},{"name":"nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay","type":"related"}],"termid":"GO:0000294","terms_by_termid":{"GO:0000294":null}}


id: GO:0033522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by addition of one or more ubiquitin groups.","definition_xrefs":["PMID:15509584","PMID:16473935","GOC:mah","PMID:18430235","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A ubiquitination (obsolete GO:0033522)","termid":"GO:0033522"}


id: PBO:0045153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 9","termid":"PBO:0045153"}


id: GO:2000310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of N-methyl-D-aspartate selective glutamate receptor activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of neurotransmitter receptor activity","termid":"GO:0099601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of NMDA receptor activity","secondary_identifiers":["Reactome:R-HSA-438066"],"synonyms":[{"name":"regulation of N-methyl-D-aspartate selective glutamate receptor activity","type":"exact"}],"termid":"GO:2000310"}


id: GO:0039628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=169 symmetry. T=169 icosahedral capsid is composed of 12 pentameric and 1680 hexameric capsomeres for a total of 10140 capsid proteins.","definition_xrefs":["VZ:10117","GOC:plm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=169 icosahedral viral capsid","synonyms":[{"name":"T=169 icosahedral capsid","type":"exact"}],"termid":"GO:0039628"}


id: GO:0120168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a hot stimulus is received and converted into a molecular signal as part of thermoception.","definition_xrefs":["PMID:21335241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of temperature stimulus involved in thermoception","termid":"GO:0050960"},{"relation_name":"part_of","term_name":"sensory perception of hot stimulus","termid":"GO:0062036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hot stimulus involved in thermoception","synonyms":[{"name":"sensory detection of heat stimulus during thermoception","type":"exact"},{"name":"sensory detection of hot stimulus during thermoception","type":"exact"},{"name":"sensory transduction of heat stimulus during thermoception","type":"exact"},{"name":"sensory transduction of hot stimulus during thermoception","type":"exact"},{"name":"thermoception, sensory detection of heat stimulus","type":"exact"},{"name":"thermoception, sensory detection of hot stimulus","type":"exact"},{"name":"thermoception, sensory transduction of heat stimulus","type":"exact"},{"name":"thermoception, sensory transduction of hot stimulus","type":"exact"}],"termid":"GO:0120168"}


id: PBO:0040837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BIVM-ERCC5 readthrough","termid":"PBO:0040837"}


id: PR:Q09835
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gos1 gene.","definition_xrefs":["UniProtKB:Q09835","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein gos1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.10","synonyms":[{"name":"Golgi SNAP receptor complex member 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Golgi SNARE protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gos1","type":"exact"}],"termid":"PR:Q09835"}


id: GO:0071582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of zinc ions (Zn2+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"is_a","term_name":"regulation of zinc ion transport","termid":"GO:0071579"},{"relation_name":"negatively_regulates","term_name":"zinc ion transport","termid":"GO:0006829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of zinc ion transport","termid":"GO:0071582"}


id: MONDO:0020641
data:
  {"annotated_genes":["SJAG_03689","SJAG_04114","SJAG_00229","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87156,87688,87157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[86702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A benign or malignant, primary or metastatic neoplasm involving the respiratory tract.","definition_xrefs":["NCIT:C3355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_03453":null,"SJAG_03689":null,"SJAG_04114":null},"genotype_count":0,"is_obsolete":false,"name":"respiratory tract neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:11200","MESH:D012142","ICD10CM:C30-C39","EFO:0003853","SCTID:126667002","UMLS:C0035244"],"synonyms":[{"name":"neoplasm of respiratory tract","type":"exact"},{"name":"neoplasm of the respiratory tract","type":"exact"},{"name":"neoplasm, respiratory tract","type":"exact"},{"name":"neoplasms, respiratory tract","type":"exact"},{"name":"respiratory system neoplasm","type":"exact"},{"name":"respiratory tract neoplasm","type":"exact"},{"name":"respiratory tract tumor","type":"exact"},{"name":"respiratory tract tumour","type":"exact"},{"name":"tract neoplasm, respiratory","type":"exact"},{"name":"tract neoplasms, respiratory","type":"exact"},{"name":"tumor of respiratory tract","type":"exact"},{"name":"tumor of the respiratory tract","type":"exact"},{"name":"tumour of respiratory tract","type":"exact"},{"name":"tumour of the respiratory tract","type":"exact"}],"termid":"MONDO:0020641","terms_by_termid":{"MONDO:0008903":null,"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0020641"}}}


id: PBO:0048474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1 pseudogene 1","termid":"PBO:0048474"}


id: PBO:0113509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C protein phosphatase (PP2C); dephosphorylates Hog1p, inactivating the osmosensing MAPK cascade; involved in Fus3p activation during pheromone response; deletion affects precursor tRNA splicing, mitochondrial inheritance, and sporulation; involved in myosin-V dependent inheritance of mitochondria, peroxisomes, vacuoles and secretory vesicles; localizes to the nucleus, cytoplasm and peroxisomes","termid":"PBO:0113509"}


id: PBO:0076372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 9","termid":"PBO:0076372"}


id: MONDO:0013967
data:
  {"annotated_genes":["SJAG_04146","SJAG_02788"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87547,87548],"is_not":false,"summary":null,"term":"MONDO:0013967"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX11B defect","termid":"MONDO:0100279"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02788":null,"SJAG_04146":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244","MONDO:0006025","MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 14B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614920","UMLS:C3554055","MEDGEN:766969","DOID:0081274","GARD:15881"],"synonyms":[{"name":"PEX11B peroxisome biogenesis disorder","type":"exact"},{"name":"PEX14B","type":"related"},{"name":"peroxisome biogenesis disorder 14B","type":"exact"},{"name":"peroxisome biogenesis disorder type 14B","type":"exact"}],"termid":"MONDO:0013967","terms_by_termid":{"MONDO:0013967":null},"xrefs":{"Monarch":{"xref_id":"0013967"}}}


id: GO:0060206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of physiological phases, occurring in the endometrium during the estrous cycle that recur at regular intervals during the reproductive years. The estrous cycle is an ovulation cycle where the endometrium is resorbed if pregnancy does not occur.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"estrous cycle phase","termid":"GO:0060206"}


id: PR:O14352
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsm4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.06","synonyms":[{"name":"Spom972h-lsm4","type":"exact"}],"termid":"PR:O14352"}


id: PBO:0082780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SWR1 complex; complex exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082780"}


id: GO:0046287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isoflavonoids, a group of water-soluble phenolic derivatives, isomeric with flavonoids, containing a flavan skeleton. They are differentiated from flavonoids by the point of attachment of the aromatic ring group.","definition_xrefs":["PMID:15734910","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"isoflavonoid metabolic process","synonyms":[{"name":"isoflavonoid metabolism","type":"exact"}],"termid":"GO:0046287"}


id: MONDO:0700220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease that occurs as a consequence of immunosuppression in a recipient of a solid organ or bone marrow transplant, or as a consequence of the transplantation.","direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease related to transplantation","secondary_identifiers":["Orphanet:306644","UMLS:C1998172","GARD:21259","MEDGEN:745174"],"termid":"MONDO:0700220","xrefs":{"Monarch":{"xref_id":"0700220"}}}


id: PBO:0031360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_amphotericin_B","termid":"PBO:0031360"}


id: PBO:0067212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 278, pseudogene","termid":"PBO:0067212"}


id: PBO:0050100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 10","termid":"PBO:0050100"}


id: GO:0044296
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The terminal specialization found in some types of dendrites which consists of numerous small terminal branches, giving the dendrite a tufted appearance.","definition_xrefs":["NIF_Subcellular:sao1340260079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite terminus","termid":"GO:0044292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic tuft","synonyms":[{"name":"dendrite tuft","type":"exact"}],"termid":"GO:0044296"}


id: MONDO:0014346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary mucosal leukokeratosis","termid":"MONDO:0015748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"white sponge nevus 2","secondary_identifiers":["OMIM:615785","DOID:0081288","MEDGEN:862758","UMLS:C4014321","GARD:16012"],"synonyms":[{"name":"WHITE sponge NEVUS 2","type":"related"},{"name":"WSN2","type":"related"},{"name":"White sponge Nevus type 2","type":"exact"},{"name":"white sponge nevus 2","type":"exact"}],"termid":"MONDO:0014346","xrefs":{"Monarch":{"xref_id":"0014346"}}}


id: MONDO:0013651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the MED23 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 18","secondary_identifiers":["GARD:22552","DOID:0081190","MEDGEN:481895","OMIM:614249","UMLS:C3280265"],"synonyms":[{"name":"MED23","type":"related"},{"name":"MED23 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT18","type":"related"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in MED23","type":"exact"},{"name":"autosomal recessive nonsyndromic intellectual disability-18","type":"related"},{"name":"autosomal recessive nonsyndromic mental retardation-18","type":"related"},{"name":"intellectual developmental disorder, autosomal recessive 18, with or without epilepsy","type":"exact"},{"name":"intellectual disability, autosomal recessive 18","type":"exact"},{"name":"intellectual disability, autosomal recessive type 18","type":"exact"},{"name":"mental retardation, autosomal recessive 18","type":"related"},{"name":"mental retardation, autosomal recessive type 18","type":"exact"}],"termid":"MONDO:0013651","xrefs":{"Monarch":{"xref_id":"0013651"}}}


id: PBO:0003187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Rhp16b (predicted)","termid":"PBO:0003187"}


id: PBO:0038762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 7","termid":"PBO:0038762"}


id: GO:0106089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion involved in sprouting angiogenesis.","definition_xrefs":["GOC:rph","PMID:24177325","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell adhesion","termid":"GO:0007162"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in sprouting angiogenesis","termid":"GO:0106088"},{"relation_name":"is_a","term_name":"negative regulation of sprouting angiogenesis","termid":"GO:1903671"},{"relation_name":"negatively_regulates","term_name":"cell adhesion involved in sprouting angiogenesis","termid":"GO:0120078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell adhesion involved in sprouting angiogenesis","termid":"GO:0106089"}


id: PBO:0074487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 4","termid":"PBO:0074487"}


id: PBO:0018093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine-37 deaminase Tad1 (predicted)","termid":"PBO:0018093"}


id: MONDO:0009293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myophosphorylase deficiency (McArdle's disease), or glycogen storage disease type 5 (GSD5), is a severe form of glycogen storage disease characterized by exercise intolerance.","definition_xrefs":["Orphanet:368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease V","secondary_identifiers":["GARD:6528","NANDO:1200828","OMIM:232600","UMLS:C0017924","MEDGEN:5341","MESH:D006012","NCIT:C84738","SCTID:55912009","MedDRA:10018462","DOID:2746","NANDO:2200541"],"synonyms":[{"name":"GSD 5","type":"related"},{"name":"GSD due to muscle glycogen phosphorylase deficiency","type":"exact"},{"name":"GSD type 5","type":"exact"},{"name":"GSD type V","type":"exact"},{"name":"GSD5","type":"related"},{"name":"McArdle disease","type":"exact"},{"name":"McArdle type glycogen storage disease","type":"related"},{"name":"McArdle's disease","type":"exact"},{"name":"Mcardle disease","type":"exact"},{"name":"PYGM glycogen storage disease","type":"exact"},{"name":"Pygm deficiency","type":"related"},{"name":"glycogen storage disease 5","type":"related"},{"name":"glycogen storage disease V","type":"exact"},{"name":"glycogen storage disease caused by mutation in PYGM","type":"exact"},{"name":"glycogen storage disease due to muscle glycogen phosphorylase deficiency","type":"related"},{"name":"glycogen storage disease type 5","type":"exact"},{"name":"glycogen storage disease type V","type":"exact"},{"name":"glycogen storage disease, type V","type":"exact"},{"name":"glycogenosis due to muscle glycogen phosphorylase deficiency","type":"exact"},{"name":"glycogenosis type 5","type":"exact"},{"name":"glycogenosis type V","type":"exact"},{"name":"muscle glycogen phosphorylase deficiency","type":"related"},{"name":"myophosphorylase deficiency","type":"exact"}],"termid":"MONDO:0009293","xrefs":{"Monarch":{"xref_id":"0009293"}}}


id: PBO:0026795
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_proteasome_localization_to_nuclear_periphery","termid":"PBO:0026795"}


id: MONDO:0021327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that involves the urethra.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethra cancer","termid":"MONDO:0004192"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of urethra","secondary_identifiers":["UMLS:C3164789","NCIT:C9106","MEDGEN:757195","SCTID:448954003"],"synonyms":[{"name":"carcinoma of the urethra","type":"exact"},{"name":"carcinoma of urethra","type":"exact"},{"name":"urethra carcinoma","type":"exact"},{"name":"urethral cancer","type":"exact"},{"name":"urethral carcinoma","type":"exact"}],"termid":"MONDO:0021327","xrefs":{"Monarch":{"xref_id":"0021327"}}}


id: MONDO:0010941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nocturnal enuresis where the child has been dry for at least 6 months but enuresis has recurred.","direct_ancestors":[{"relation_name":"is_a","term_name":"nocturnal enuresis","termid":"MONDO:0000022"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nocturnal enuresis, 2","secondary_identifiers":["UMLS:C1833268","MESH:C563439","MEDGEN:331473","OMIM:600808"],"synonyms":[{"name":"ENUR2","type":"related"},{"name":"enuresis, nocturnal, 2","type":"related"}],"termid":"MONDO:0010941","xrefs":{"Monarch":{"xref_id":"0010941"}}}


id: PBO:0028676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_acetylation_at_centromere_outer_repeat","termid":"PBO:0028676"}


id: GO:0061368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behaviour of an organism as a result of a formalin pain stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral response to chemical pain","termid":"GO:0061366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to formalin induced pain","termid":"GO:0061368"}


id: PBO:0025496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-N ortholog Mis15","termid":"PBO:0025496"}


id: MONDO:0010275
data:
  {"annotated_genes":["SJAG_02016"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86922],"is_not":false,"summary":null,"term":"MONDO:0010275"}]},"cv_name":"mondo","definition":"A rare genetic neurological disorder characterized by the association of hypomyelinating leukodystrophy with spondylometaphyseal dysplasia. Patients present in infancy with absent or delayed ability to walk independently, slowly progressive motor deterioration, spasticity, ataxia, proximal weakness, and joint contractures. Additional manifestations include mild cognitive impairment, short stature, scoliosis, enlarged and deformed joints, dysarthria, nystagmus, visual defects, and mildly dysmorphic features, among others. Mode of inheritance is X-linked recessive.","definition_xrefs":["Orphanet:83629"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Bieganski type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536671","GARD:4891","MEDGEN:335350","OMIM:300232","ICD10CM:G11.4","MESH:C567065","Orphanet:168448","UMLS:C1846148","icd11.foundation:1073330593"],"synonyms":[{"name":"H-SMD","type":"exact"},{"name":"LKMCD","type":"related"},{"name":"SEMD X-linked with mental deterioration","type":"related"},{"name":"SEMD, X-linked, with mental deterioration","type":"related"},{"name":"hypomyelination-spondyloepimetaphyseal dysplasia syndrome","type":"exact"},{"name":"leukoencephalopathy with metaphyseal chondrodysplasia","type":"related"},{"name":"leukoencephalopathy-SEMD syndrome","type":"exact"},{"name":"leukoencephalopathy-metaphyseal chondrodysplasia syndrome","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia X-linked with mental deterioration","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, X-linked, with hypomyelinating leukodystrophy, X-linked recessive","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, X-linked, with mental deterioration","type":"related"}],"termid":"MONDO:0010275","terms_by_termid":{"MONDO:0010275":null},"xrefs":{"Monarch":{"xref_id":"0010275"}}}


id: MONDO:0007331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cleft chin (obsolete MONDO:0007331)","secondary_identifiers":["OMIM:119000"],"synonyms":[{"name":"Chin dimple","type":"related"},{"name":"cleft chin","type":"exact"}],"termid":"MONDO:0007331","xrefs":{"Monarch":{"xref_id":"0007331"}}}


id: GO:0071736
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of an IgG isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex, circulating","termid":"GO:0042571"},{"relation_name":"is_a","term_name":"IgG immunoglobulin complex","termid":"GO:0071735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"IgG immunoglobulin complex, circulating","synonyms":[{"name":"IgG antibody","type":"narrow"},{"name":"IgG1 antibody","type":"narrow"},{"name":"IgG2 antibody","type":"narrow"},{"name":"IgG2a antibody","type":"narrow"},{"name":"IgG2b antibody","type":"narrow"},{"name":"IgG2c antibody","type":"narrow"},{"name":"IgG3 antibody","type":"narrow"},{"name":"IgG4 antibody","type":"narrow"}],"termid":"GO:0071736"}


id: MONDO:0002417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ethmoid sinus adenoid cystic carcinoma (obsolete MONDO:0002417)","termid":"MONDO:0002417","xrefs":{"Monarch":{"xref_id":"0002417"}}}


id: GO:0016132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of brassinosteroids, any of a group of steroid derivatives that occur at very low concentrations in plant tissues and may have hormone-like effects.","definition_xrefs":["ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytosteroid biosynthetic process","termid":"GO:0016129"},{"relation_name":"is_a","term_name":"brassinosteroid metabolic process","termid":"GO:0016131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"brassinosteroid biosynthetic process","synonyms":[{"name":"brassinosteroid anabolism","type":"exact"},{"name":"brassinosteroid biosynthesis","type":"exact"},{"name":"brassinosteroid formation","type":"exact"},{"name":"brassinosteroid synthesis","type":"exact"}],"termid":"GO:0016132"}


id: PBO:0017879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein Gtp1, implicated in cytoplasmic translation (predicted)","termid":"PBO:0017879"}


id: PBO:0054296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1687","termid":"PBO:0054296"}


id: GO:1901780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentalenolactone.","definition_xrefs":["PMID:17178094","MetaCyc:PWY-6915","UniPathway:UPA00974","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"pentalenolactone metabolic process","termid":"GO:1901778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"pentalenolactone biosynthetic process","synonyms":[{"name":"pentalenolactone anabolism","type":"exact"},{"name":"pentalenolactone biosynthesis","type":"exact"},{"name":"pentalenolactone formation","type":"exact"},{"name":"pentalenolactone synthesis","type":"exact"}],"termid":"GO:1901780"}


id: PBO:0066429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like estrogen regulated growth inhibitor","termid":"PBO:0066429"}


id: MONDO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete corneal dystrophy, Fuchs endothelial (obsolete MONDO:0000164)","termid":"MONDO:0000164","xrefs":{"Monarch":{"xref_id":"0000164"}}}


id: GO:0071113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell adhesion molecule ICAM-4.","definition_xrefs":["PMID:12477717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-ICAM-4 complex","synonyms":[{"name":"ITGAIIb-ITGB3-ICAM4 complex","type":"narrow"}],"termid":"GO:0071113"}


id: MONDO:0006440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic mastocytosis with associated clonal hematological non-mast-cell lineage disease (obsolete MONDO:0006440)","termid":"MONDO:0006440","xrefs":{"Monarch":{"xref_id":"0006440"}}}


id: PBO:0085446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Positive regulator of genes in multiple nitrogen degradation pathways; contains DNA binding domain but does not appear to bind the dodecanucleotide sequence present in the promoter region of many genes involved in allantoin catabolism","termid":"PBO:0085446"}


id: GO:2000043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac cell fate specification.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"regulates","term_name":"cardiac cell fate specification","termid":"GO:0060912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac cell fate specification","termid":"GO:2000043"}


id: PBO:0034403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_target_sequence_feature_(obsolete_requires_target_sequence_feature)","termid":"PBO:0034403"}


id: PBO:0040279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATOX1 antisense RNA 1","termid":"PBO:0040279"}


id: PATO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female receptivity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"female receptivity","termid":"PATO:0001720"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased female receptivity","synonyms":[{"name":"low female receptivity","type":"exact"}],"termid":"PATO:0001724"}


id: MONDO:0016013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Foetal methylmercury syndrome is characterized by a group of symptoms that may be observed in a fetus or newborn when the mother was exposed during pregnancy to excessive amounts of methylmercury.","definition_xrefs":["Orphanet:1917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal methylmercury syndrome","secondary_identifiers":["ICD9:759.89","UMLS:C0265376","GARD:3575","MEDGEN:82710","MESH:D020262","SCTID:62110005","icd11.foundation:1975519045"],"synonyms":[{"name":"Methyl mercury antenatal exposure","type":"related"},{"name":"Methyl mercury antenatal infection","type":"exact"},{"name":"Minamata disease","type":"related"}],"termid":"MONDO:0016013","xrefs":{"Monarch":{"xref_id":"0016013"}}}


id: FYPO:0007033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of fluconazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to fluconazole","synonyms":[{"name":"resistance to fluconazole during mitotic cell cycle","type":"related"},{"name":"resistance to fluconazole during vegetative growth","type":"exact"},{"name":"resistant to fluconazole","type":"exact"}],"termid":"FYPO:0007033"}


id: GO:0031312
data:
  {"annotated_genes":["SJAG_04000","SJAG_05398","SJAG_02699","SJAG_01043","SJAG_00852","SJAG_03563","SJAG_00230","SJAG_00721","SJAG_00933","SJAG_00655","SJAG_00576","SJAG_04642","SJAG_01249","SJAG_03456"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100774,104076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099616"},{"annotations":[60851,65333,91218,64156,106523,109815,108473,107176,62242,101596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031314"},{"annotations":[107523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031315"},{"annotations":[94959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097629"},{"annotations":[94960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097632"}]},"cv_name":"cellular_component","definition":"The component of an organelle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of membrane","termid":"GO:0019898"},{"relation_name":"part_of","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"intracellular organelle","termid":"GO:0043229"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_00655":null,"SJAG_00721":null,"SJAG_00852":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01249":null,"SJAG_02699":null,"SJAG_03456":null,"SJAG_03563":null,"SJAG_04000":null,"SJAG_04642":null,"SJAG_05398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of organelle membrane","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to organelle membrane","type":"narrow"}],"termid":"GO:0031312","terms_by_termid":{"GO:0031314":null,"GO:0031315":null,"GO:0097629":null,"GO:0097632":null,"GO:0099616":null}}


id: GO:0015292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transport of a single molecular species across a membrane; transport is independent of the movement of any other molecular species.","definition_xrefs":["GOC:mtg_transport","PMID:10839820","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"uniporter activity","synonyms":[{"name":"facilitated diffusion carrier","type":"exact"},{"name":"single-species transporter activity","type":"exact"},{"name":"uniport","type":"related"}],"termid":"GO:0015292"}


id: PBO:0065548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 2","termid":"PBO:0065548"}


id: MONDO:0025100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the udder in cows.","definition_xrefs":["MESH:D008414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mastitis, bovine","synonyms":[{"name":"Mastitides, bovine","type":"related"},{"name":"bovine Mastitides","type":"related"},{"name":"bovine mastitis","type":"related"}],"termid":"MONDO:0025100","xrefs":{"Monarch":{"xref_id":"0025100"}}}


id: PATO:0001636
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality (continuant) inhering in a bearer by virtue of the bearer's being non-essential or dispensable.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity (continuant)","termid":"PATO:0001634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unnecessary (continuant)","termid":"PATO:0001636"}


id: PBO:0089149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF126 ortholog","termid":"PBO:0089149"}


id: PBO:0075350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sosondowah ankyrin repeat domain family member A","termid":"PBO:0075350"}


id: MONDO:0020076
data:
  {"annotated_genes":["SJAG_03453","SJAG_05979","SJAG_03905","SJAG_01013","SJAG_01349","SJAG_01748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87558,87559,87556,87712,87557,87711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"}]},"cv_name":"mondo","definition":"A clonal hematopoietic stem cell disorder, characterized by proliferation in the bone marrow of one or more of the myeloid (i.e., granulocytic, erythroid, megakaryocytic, and mast cell) lineages. It is primarily a neoplasm of adults. (WHO 2008)","definition_xrefs":["NCIT:C4345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid neoplasm","termid":"MONDO:0005170"},{"relation_name":"is_a","term_name":"myeloid hemopathy","termid":"MONDO:0015756"},{"relation_name":"is_a","term_name":"bone marrow cancer","termid":"MONDO:0021138"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"myeloproliferative neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:425333006","ICDO:9975/1","MedDRA:10028576","GARD:9319","Orphanet:98274","UMLS:C1292778","DOID:2226","EFO:0002428","ICD9:238.79","ONCOTREE:MPN","MEDGEN:220955","ICDO:9960/3"],"synonyms":[{"name":"CMPD","type":"exact"},{"name":"CMPD, U","type":"related"},{"name":"MPD","type":"exact"},{"name":"MPN","type":"exact"},{"name":"chronic myeloproliferative disease","type":"exact"},{"name":"chronic myeloproliferative disorder","type":"exact"},{"name":"chronic myeloproliferative disorders","type":"related"},{"name":"chronic myeloproliferative neoplasm","type":"exact"},{"name":"myeloproliferative disorder","type":"exact"},{"name":"myeloproliferative neoplasm","type":"exact"},{"name":"myeloproliferative neoplasm, chronic","type":"exact"},{"name":"myeloproliferative neoplasms","type":"related"},{"name":"myeloproliferative tumor","type":"exact"},{"name":"myeloproliferative tumour","type":"exact"}],"termid":"MONDO:0020076","terms_by_termid":{"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0020076"}}}


id: PBO:0000351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Dre4","termid":"PBO:0000351"}


id: GO:0008359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process in which bicoid mRNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular mRNA localization","termid":"GO:1904580"},{"relation_name":"regulates","term_name":"bicoid mRNA localization","termid":"GO:0045450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bicoid mRNA localization","synonyms":[{"name":"regulation of bicoid mRNA localisation","type":"exact"}],"termid":"GO:0008359"}


id: PR:Q09857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general vesicular transport factor p115 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10013:SF0","PRO:DNx","OMA:SCHPO01822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracellular protein transport protein uso1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.03c","secondary_identifiers":["UniProtKB:Q09857"],"synonyms":[{"name":"Spom972h-USO1","type":"exact"}],"termid":"PR:Q09857"}


id: PBO:0078915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 4-1","termid":"PBO:0078915"}


id: PBO:0057063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 146b","termid":"PBO:0057063"}


id: PBO:0038723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 18","termid":"PBO:0038723"}


id: RO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Candidate definition: x directly_develops from y if and only if there exists some developmental process (GO:0032502) p such that x and y both participates in p, and x is the output of p and y is the input of p, and a substantial portion of the matter of y comes from x, and the start of x is coincident with or after the end of y","direct_ancestors":[{"relation_name":"is_a","term_name":"develops_from","termid":"RO:0002202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_develops_from","termid":"RO:0002207"}


id: PBO:0077154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain containing 4","termid":"PBO:0077154"}


id: GO:1990235
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of diamine N-acetyltransferase activity.","definition_xrefs":["PMID:8077207","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase complex","termid":"GO:1902493"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"diamine N-acetyltransferase complex","synonyms":[{"name":"SAT complex","type":"narrow"},{"name":"SAT tetramer","type":"narrow"},{"name":"spermidine acetyltransferase complex","type":"narrow"}],"termid":"GO:1990235"}


id: FYPO:0001211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Glc3Man9GlcNAc measured in a cell is too low to detect. Glc3Man9GlcNAc2 is an N-glycan that is involved in post-translational modification of proteins, and consists of a branched ten-membered mannooligosaccharide containing three D-glucose residues, nine D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["CHEBI:53019","PMID:9813085","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide absent from cell","termid":"FYPO:0001209"},{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"Glc3Man9GlcNAc absent from cell","synonyms":[{"name":"G3M9 glycan absent from cell","type":"exact"},{"name":"Glc3Man9GlcNAc absent from cell during mitotic cell cycle","type":"related"},{"name":"Glc3Man9GlcNAc absent from cell during vegetative growth","type":"exact"},{"name":"Glc3Man9GlcNAc2 absent from cell","type":"exact"},{"name":"absent Glc3Man9GlcNAc","type":"exact"}],"termid":"FYPO:0001211"}


id: PBO:0042130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil glutamate rich protein 1","termid":"PBO:0042130"}


id: PATO:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000007 relative activity (obsolete PATO:0000007)","termid":"PATO:0000007"}


id: MONDO:0001593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that involves the rectum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal disorder","secondary_identifiers":["MESH:D012002","EFO:0009685","MEDGEN:19701","SCTID:5964004","DOID:1285","ICD9:569.49","UMLS:C0034882"],"synonyms":[{"name":"disease of rectum","type":"exact"},{"name":"disease or disorder of rectum","type":"exact"},{"name":"disorder of rectum","type":"exact"},{"name":"rectal disorder","type":"exact"},{"name":"rectum disease","type":"exact"},{"name":"rectum disease or disorder","type":"exact"}],"termid":"MONDO:0001593","xrefs":{"Monarch":{"xref_id":"0001593"}}}


id: PBO:0025519
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by A. thaliana cdc2aAt","termid":"PBO:0025519"}


id: MONDO:0016780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"motor developmental delay due to 14q32.2 paternally expressed gene defect","termid":"MONDO:0014541"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 14","termid":"MONDO:0016912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal 14q32.2 microdeletion syndrome","secondary_identifiers":["MEDGEN:1842589","UMLS:C5679639","GARD:17220","Orphanet:254525"],"synonyms":[{"name":"paternal del(14)(q32.2)","type":"exact"},{"name":"paternal monosomy 14q32.2","type":"exact"}],"termid":"MONDO:0016780","xrefs":{"Monarch":{"xref_id":"0016780"}}}


id: PBO:0060612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurochondrin","termid":"PBO:0060612"}


id: PBO:0041818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping protein regulator and myosin 1 linker 3","termid":"PBO:0041818"}


id: MONDO:0005703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Churg-Strauss syndrome (obsolete MONDO:0005703)","termid":"MONDO:0005703","xrefs":{"Monarch":{"xref_id":"0005703"}}}


id: PBO:0050984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 56","termid":"PBO:0050984"}


id: MOD:00389
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to N-formyl-L-proline.","definition_xrefs":["PubMed:5464655","PubMed:12051774","Unimod:122#N-term","RESID:AA0384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formyl-L-proline","synonyms":[{"name":"(2S)-1-formylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"1-formyl-2-pyrrolidinecarboxylic acid","type":"exact"},{"name":"1-formylproline","type":"exact"},{"name":"N-formyl-L-proline","type":"exact"},{"name":"N-formylated L-proline","type":"exact"},{"name":"NFoPro","type":"exact"}],"termid":"MOD:00389"}


