# terms

id: PBO:0043329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 4","termid":"PBO:0043329"}


id: PBO:0069663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 940, pseudogene","termid":"PBO:0069663"}


id: GO:0047610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetylsalicylate + H2O = acetate + H+ + salicylate.","definition_xrefs":["EC:3.1.1.55","RHEA:11752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0003824","GO:0019213","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"acetylsalicylate deacetylase activity","secondary_identifiers":["KEGG_REACTION:R02942","MetaCyc:ACETYLSALICYLATE-DEACETYLASE-RXN"],"synonyms":[{"name":"acetylsalicylate O-acetylhydrolase activity","type":"related"},{"name":"acetylsalicylic acid esterase activity","type":"related"},{"name":"aspirin esterase activity","type":"related"},{"name":"aspirin hydrolase activity","type":"related"}],"termid":"GO:0047610"}


id: PBO:0034091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of_positively_regulating","termid":"PBO:0034091"}


id: PBO:0071062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 64","termid":"PBO:0071062"}


id: PBO:0048105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FTX transcript, XIST regulator","termid":"PBO:0048105"}


id: PBO:0083335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the essential uncharacterized ORF YDR412W that is implicated in rRNA processing","termid":"PBO:0083335"}


id: PBO:0058088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4305","termid":"PBO:0058088"}


id: MONDO:1011978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central retinal degeneration, non-human animal","secondary_identifiers":["OMIA:000867"],"termid":"MONDO:1011978","xrefs":{"Monarch":{"xref_id":"1011978"}}}


id: PR:O74893
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S20 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04938","PANTHER:PTHR11700:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.09","secondary_identifiers":["UniProtKB:O74893"],"synonyms":[{"name":"Spom972h-RPS20","type":"exact"}],"termid":"PR:O74893"}


id: PBO:0052980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LACTB2 antisense RNA 1","termid":"PBO:0052980"}


id: PR:Q9C0Y6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADPH-dependent curcumin reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01239","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-type alcohol dehydrogenase-like protein PB24D3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.08c","secondary_identifiers":["UniProtKB:Q9C0Y6"],"synonyms":[{"name":"Spom972h-curA","type":"exact"}],"termid":"PR:Q9C0Y6"}


id: GO:0047748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5beta-cholestane-3alpha,7alpha,12alpha-triol + 5 H+ + 3 O2 + 6 reduced [adrenodoxin] = (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate + 4 H2O + 6 oxidized [adrenodoxin].","definition_xrefs":["RHEA:34631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cholestanetetraol 26-dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-13690","EC:1.14.15.15"],"synonyms":[{"name":"5beta-cholestane-3alpha,7alpha,12alpha,26-tetraol:NAD+ 26-oxidoreductase activity","type":"exact"},{"name":"5beta-cholestane-3alpha,7alpha,12alpha,26-tetrol dehydrogenase activity","type":"exact"},{"name":"TEHC-NAD oxidoreductase activity","type":"exact"},{"name":"cholestanetetrol 26-dehydrogenase activity","type":"exact"}],"termid":"GO:0047748"}


id: PBO:0080510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WARS2 intronic transcript 1","termid":"PBO:0080510"}


id: GO:0030226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an apolipoprotein to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"apolipoprotein receptor activity","termid":"GO:0030226"}


id: PBO:0070661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 32","termid":"PBO:0070661"}


id: PBO:0060085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 32","termid":"PBO:0060085"}


id: PBO:0055267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2694","termid":"PBO:0055267"}


id: GO:1902570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a nucleolus.","definition_xrefs":["PMID:22809626","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nucleolus","synonyms":[{"name":"protein localisation in nucleolus","type":"exact"},{"name":"protein localisation to nucleolus","type":"exact"},{"name":"protein localization in nucleolus","type":"exact"}],"termid":"GO:1902570"}


id: PBO:0062539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 4","termid":"PBO:0062539"}


id: PBO:0045657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled segment polarity protein 1 pseudogene 1","termid":"PBO:0045657"}


id: PBO:0035864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4_acetylation_during_vegetative_growth","termid":"PBO:0035864"}


id: GO:0010952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of peptidase activity, the hydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteolysis","termid":"GO:0045862"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidase activity","termid":"GO:0010952"}


id: GO:0018106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-histidine to form peptidyl-1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine) or peptidyl-3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine).","definition_xrefs":["RESID:AA0036","RESID:AA0035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine phosphorylation","termid":"GO:0018106"}


id: GO:0047809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + A = AH(2) + pyruvate.","definition_xrefs":["RHEA:15089","EC:1.1.99.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-2-hydroxy-acid dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00297","MetaCyc:D-2-HYDROXY-ACID-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(R)-2-hydroxy-acid:(acceptor) 2-oxidoreductase activity","type":"related"},{"name":"2-hydroxy acid dehydrogenase activity","type":"related"}],"termid":"GO:0047809"}


id: PATO:0000433
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A parental quality inhering in a bearer by virtue of exhibiting the characteristic of a father.","definition_xrefs":["WordNet:WordNet"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000433 paternal (obsolete PATO:0000433)","termid":"PATO:0000433"}


id: GO:0044651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to a host epithelial cell via adhesion molecules, general stickiness etc., either directly or indirectly.","definition_xrefs":["GOC:jl","PMID:10066176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host epithelial cell","termid":"GO:0044651"}


id: GO:2000511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of granzyme A production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"regulates","term_name":"granzyme A production","termid":"GO:0035746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of granzyme A production","termid":"GO:2000511"}


id: PBO:0090972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Srp1 family splicing factor","termid":"PBO:0090972"}


id: GO:0016673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.8.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulphur group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016673"}


id: PBO:0065798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing like","termid":"PBO:0065798"}


id: PBO:0116207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase, implicated in vacuole related processes","termid":"PBO:0116207"}


id: PBO:0043965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin lambda 1","termid":"PBO:0043965"}


id: GO:0070222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sulfide oxidation process that proceeds via the reaction catalyzed by sulfide dehydrogenase.","definition_xrefs":["MetaCyc:PWY-5274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfide oxidation","termid":"GO:0019418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfide oxidation, using sulfide dehydrogenase","synonyms":[{"name":"sulphide oxidation, using sulfide dehydrogenase","type":"exact"}],"termid":"GO:0070222"}


id: MOD:00320
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-glutamic acid residue by a thioether bond to form 4-(S-L-cysteinyl)-L-glutamic acid.","definition_xrefs":["ChEBI:20293","PubMed:11555656","RESID:AA0315","PubMed:11717396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"4-(S-L-cysteinyl)-L-glutamic acid","synonyms":[{"name":"(2S,3S,7R)-2,7-diamino-4-carboxy-5-thiaoctanedioic acid","type":"exact"},{"name":"(2S,4S)-2-amino-4-[(R)-2-amino-2-carboxyethyl]sulfanylpentanedioic acid","type":"exact"},{"name":"4-(L-cystein-S-yl)-L-glutamic acid","type":"exact"},{"name":"CROSSLNK 4-cysteinyl-glutamic acid (Cys-Glu)","type":"exact"}],"termid":"MOD:00320"}


id: GO:0120244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a terminal acetylenic compound, involving a terminal acetylenic compound, a compound which contains a terminal alkyne moiety in which which a carbon of the carbon-carbon triple bond (aka C#C) moiety is attached to a hydrogen atom.","definition_xrefs":["DOI:10.1007/978-1-4615-4913-0_3","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylenic compound metabolic process","termid":"GO:0120246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terminal acetylenic compound metabolic process","synonyms":[{"name":"terminal alkyne substituted compound metabolic process","type":"exact"},{"name":"terminal alkyne substituted compound metabolism","type":"exact"}],"termid":"GO:0120244"}


id: GO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage between the LSU-rRNA and the 4.5S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. Note that the use of the word tetracistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0002103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"endonucleolytic cleaveage between LSU-rRNA and 4.5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0002105"}


id: PR:O13909
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C11.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C11.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.01","synonyms":[{"name":"Spom972h-SPAC23C11.01","type":"exact"}],"termid":"PR:O13909"}


id: GO:0004576
data:
  {"annotated_genes":["SJAG_04127"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004579"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a oligosaccharyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04127":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"oligosaccharyl transferase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"oligosaccharide transferase activity","type":"exact"}],"termid":"GO:0004576","terms_by_termid":{"GO:0004579":null}}


id: PBO:0034819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export factor Sac32 (predicted)","termid":"PBO:0034819"}


id: PBO:0077776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM40 pseudogene 3","termid":"PBO:0077776"}


id: PBO:0066062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap guanine nucleotide exchange factor 6","termid":"PBO:0066062"}


id: FYPO:0001800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is abolished, and the protein is instead detected distributed throughout the plasma membrane and/or cell cortex.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during vegetative growth","termid":"FYPO:0001585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to cell tip, with protein distributed in plasma membrane or cortex","synonyms":[{"name":"abolished protein localisation to cell tip, with protein distributed in plasma membrane or cortex","type":"exact"},{"name":"abolished protein localization to cell end, with protein distributed in plasma membrane or cortex","type":"exact"},{"name":"abolished protein localization to cell tip, with protein distributed in cell cortex","type":"narrow"},{"name":"abolished protein localization to cell tip, with protein distributed in cell membrane or cortex","type":"exact"},{"name":"abolished protein localization to cell tip, with protein distributed in plasma membrane","type":"narrow"},{"name":"abolished protein localization to cell tip, with protein distributed in plasma membrane or cortex during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cell tip, with protein distributed in plasma membrane or cortex, during vegetative growth","type":"exact"},{"name":"protein localization to cell tip abolished, with protein distributed in plasma membrane or cortex","type":"exact"}],"termid":"FYPO:0001800"}


id: PBO:0065838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 3","termid":"PBO:0065838"}


id: FYPO:0001413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sulfide (S2-, also called acid labile sulfide) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered cellular sulfide level","termid":"FYPO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular sulfide level","synonyms":[{"name":"increased cellular acid labile sulfide level","type":"exact"},{"name":"increased cellular sulfide accumulation","type":"related"},{"name":"increased cellular sulfide ion level","type":"exact"},{"name":"increased cellular sulfide level during mitotic cell cycle","type":"related"},{"name":"increased cellular sulfide level during vegetative growth","type":"exact"},{"name":"increased cellular sulphide level","type":"exact"}],"termid":"FYPO:0001413"}


id: PR:O94700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endothelial differentiation-related factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02913","PANTHER:PTHR10245:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiprotein-bridging factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.17","secondary_identifiers":["UniProtKB:O94700"],"synonyms":[{"name":"Spom972h-EDF1","type":"exact"}],"termid":"PR:O94700"}


id: FYPO:0006504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell forms two or more shmoos, usually in succession, without fusing with a partner cell. Cell fusion may or may not subsequently occur.","definition_xrefs":["PomBase:mah","PMID:29453312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000301"],"is_obsolete":false,"name":"multiple shmoo formation","synonyms":[{"name":"formation of multiple mating projections","type":"exact"},{"name":"formation of multiple shmoos","type":"exact"},{"name":"multiple mating projection assembly","type":"exact"}],"termid":"FYPO:0006504"}


id: PBO:0016091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin family protein Plp2 (predicted)","termid":"PBO:0016091"}


id: PBO:0059487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide reductase B2","termid":"PBO:0059487"}


id: PBO:0111949
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain","termid":"PBO:0111949"}


id: FYPO:0007355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell contains more Smp foci than normal.","definition_xrefs":["PomBase:mah","PMID:31811152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Smp foci","synonyms":[{"name":"increased number of Sme2 foci","type":"narrow"},{"name":"increased number of Smp dots","type":"exact"}],"termid":"FYPO:0007355"}


id: GO:1903468
data:
  {"annotated_genes":["SJAG_03160","SJAG_03695","SJAG_02074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103637,112346,117578],"is_not":false,"summary":null,"term":"GO:1903468"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA replication initiation involved in mitotic DNA replication.","definition_xrefs":["PMID:1234","GOC:mtg_cell_cycle","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication initiation","termid":"GO:0032298"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle DNA replication","termid":"GO:1903465"},{"relation_name":"is_a","term_name":"regulation of mitotic DNA replication initiation","termid":"GO:1903466"},{"relation_name":"positively_regulates","term_name":"mitotic DNA replication initiation","termid":"GO:1902975"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02074":null,"SJAG_03160":null,"SJAG_03695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006260","GO:0007049","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of DNA replication initiation involved in mitotic DNA replication","type":"narrow"},{"name":"activation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"narrow"},{"name":"positive regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"up regulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"up regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"up-regulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"up-regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"upregulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"upregulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1903468","terms_by_termid":{"GO:1903468":null}}


id: GO:0002134
data:
  {"annotated_genes":["SJAG_03453","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91200,92018],"is_not":false,"summary":null,"term":"GO:0002134"}]},"cv_name":"molecular_function","definition":"Binding to UTP, uridine 5'-triphosphate.","definition_xrefs":["GOC:hjd","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide binding","termid":"GO:0032557"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"UTP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002134","terms_by_termid":{"GO:0002134":null}}


id: GO:1990324
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXVI) chains.","definition_xrefs":["GOC:bhm","PMID:17876790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XXVI trimer","termid":"GO:1990324"}


id: MONDO:0014210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-hypotonia-spasticity-sleep disorder syndrome","secondary_identifiers":["UMLS:C3809672","Orphanet:356996","MEDGEN:816002","GARD:17541","DOID:0081202","OMIM:615493"],"synonyms":[{"name":"MRT37","type":"related"},{"name":"intellectual disability, autosomal recessive 37","type":"related"},{"name":"intellectual disability, autosomal recessive type 37","type":"exact"},{"name":"mental retardation, autosomal recessive 37","type":"related"},{"name":"mental retardation, autosomal recessive type 37","type":"exact"},{"name":"mental retardation, autosomal recessive, 37","type":"exact"}],"termid":"MONDO:0014210","xrefs":{"Monarch":{"xref_id":"0014210"}}}


id: GO:0097020
data:
  {"annotated_genes":["SJAG_00785","SJAG_02120"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77340,119107],"is_not":false,"summary":null,"term":"GO:0097020"}]},"cv_name":"molecular_function","definition":"Binding specifically to a substance (cargo) to deliver it to a COPII transport vesicle. Cargo receptors span a membrane (either the plasma membrane or a vesicle membrane), binding simultaneously to cargo molecules and coat adaptors, to efficiently recruit soluble proteins to nascent vesicles.","definition_xrefs":["GOC:rb","PMID:16957051","PMID:20236934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00785":null,"SJAG_02120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"COPII receptor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0097020","terms_by_termid":{"GO:0097020":null}}


id: GO:0140128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that specifically binds either to an unmodified histone H1 or a form modified by a post-translational modification on a specific residue. The most common PTMs on histones are methylation, acetylation and phosphorylation.","definition_xrefs":["PMID:17540172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone reader activity","termid":"GO:0140566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0140566"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0140566","GO:0060090"],"is_obsolete":false,"name":"histone H1 reader activity","termid":"GO:0140128"}


id: PBO:0070069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 26, pseudogene","termid":"PBO:0070069"}


id: GO:0080105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-methylthiopropyl-glucosinolate = 6-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"6-methylthiopropyl glucosinolate S-oxygenase activity","termid":"GO:0080105"}


id: PATO:0000608
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's affording blocked passage or view.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"closure","termid":"PATO:0000136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"closed","synonyms":[{"name":"blocked","type":"related"}],"termid":"PATO:0000608"}


id: MONDO:1011081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, horse","secondary_identifiers":["OMIA:001033-9796"],"termid":"MONDO:1011081","xrefs":{"Monarch":{"xref_id":"1011081"}}}


id: GO:0060637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the rate, frequency, or extent of lactation as a result of the secretion of a signal from the mammary fat and its reception by a mammary epithelial cell.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"is_a","term_name":"positive regulation of lactation","termid":"GO:1903489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of lactation by mesenchymal-epithelial cell signaling","synonyms":[{"name":"positive regulation of lactation by mesenchymal-epithelial cell signalling","type":"exact"}],"termid":"GO:0060637"}


id: PBO:0026834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_poly(U)_polymerase_activity","termid":"PBO:0026834"}


id: GO:0062056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a compound eye pigment cell, a cell of the retina containing screening pigments that functions to screen photoreceptors from light leaking from adjacent ommatidia.","definition_xrefs":["PMID:8929534","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye pigment cell differentiation","termid":"GO:0062056"}


id: PBO:0067968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 270","termid":"PBO:0067968"}


id: PBO:0088943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhoD-like superfamily","termid":"PBO:0088943"}


id: PBO:0072608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 3","termid":"PBO:0072608"}


id: PBO:0041921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 4","termid":"PBO:0041921"}


id: MONDO:0957541
data:
  {"annotated_genes":["SJAG_04772"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86714],"is_not":false,"summary":null,"term":"MONDO:0957541"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04772":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and speech delay, with or without seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070512","MEDGEN:1841290","OMIM:620455","UMLS:C5830654"],"termid":"MONDO:0957541","terms_by_termid":{"MONDO:0957541":null},"xrefs":{"Monarch":{"xref_id":"0957541"}}}


id: MONDO:1011750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular dysplasia and interface dermatitis, non-human animal","secondary_identifiers":["OMIA:001369"],"termid":"MONDO:1011750","xrefs":{"Monarch":{"xref_id":"1011750"}}}


id: MOD:00519
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:151","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc2Pent1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)Pent(1)","type":"related"},{"name":"Hex1HexNAc2Pent1","type":"related"}],"termid":"MOD:00519"}


id: GO:0006086
data:
  {"annotated_genes":["SJAG_00866","SJAG_02006","SJAG_03290","SJAG_03310","SJAG_02158","SJAG_01402","SJAG_03064"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73114,73746,74982,79415,87768,88198],"is_not":false,"summary":null,"term":"GO:0006086"},{"annotations":[75466],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate.","definition_xrefs":["GOC:dph","GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA biosynthetic process","termid":"GO:0006085"},{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_01402":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03310":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0055086"],"is_obsolete":false,"name":"pyruvate decarboxylation to acetyl-CoA","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PYRUVDEHYD-PWY","Reactome:R-HSA-9861559"],"synonyms":[{"name":"acetyl-CoA anabolism from pyruvate","type":"exact"},{"name":"acetyl-CoA biosynthetic process from pyruvate","type":"exact"},{"name":"acetyl-CoA formation from pyruvate","type":"exact"},{"name":"acetyl-CoA synthesis from pyruvate","type":"exact"},{"name":"oxidative decarboxylation of pyruvate","type":"exact"},{"name":"pyruvate decarboxylation","type":"narrow"},{"name":"pyruvate dehydrogenase pathway","type":"exact"}],"termid":"GO:0006086","terms_by_termid":{"GO:0006086":null,"GO:0010510":null}}


id: PBO:0108928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBL pseudogene 1","termid":"PBO:0108928"}


id: PBO:0069479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 746, pseudogene","termid":"PBO:0069479"}


id: GO:1904791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of shelterin complex assembly.","definition_xrefs":["GOC:BHF","GOC:nc","GOC:BHF_telomere","GOC:TermGenie","GO_REF:0000058","PMID:24270157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of shelterin complex assembly","termid":"GO:1904790"},{"relation_name":"negatively_regulates","term_name":"shelterin complex assembly","termid":"GO:0071573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"negative regulation of shelterin complex assembly","synonyms":[{"name":"down regulation of Pot1 complex assembly","type":"exact"},{"name":"down regulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"down regulation of shelterin complex formation","type":"exact"},{"name":"down regulation of telosome assembly","type":"exact"},{"name":"down-regulation of Pot1 complex assembly","type":"exact"},{"name":"down-regulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"down-regulation of shelterin complex formation","type":"exact"},{"name":"down-regulation of telosome assembly","type":"exact"},{"name":"downregulation of Pot1 complex assembly","type":"exact"},{"name":"downregulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"downregulation of shelterin complex formation","type":"exact"},{"name":"downregulation of telosome assembly","type":"exact"},{"name":"inhibition of Pot1 complex assembly","type":"narrow"},{"name":"inhibition of Pot1-Tpz1 complex assembly","type":"narrow"},{"name":"inhibition of shelterin complex formation","type":"narrow"},{"name":"inhibition of telosome assembly","type":"narrow"},{"name":"negative regulation of Pot1 complex assembly","type":"exact"},{"name":"negative regulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"negative regulation of shelterin complex formation","type":"exact"},{"name":"negative regulation of telosome assembly","type":"exact"}],"termid":"GO:1904791"}


id: MONDO:0013393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal 7q11.23 microdeletion syndrome is a rare chromosomal anomaly characterized by epilepsy, neurodevelopmental disorder variably including developmental delays and intellectual disabilities of variable severity, learning disability and neurobehavioral abnormalities (autism spectrum disorder, hyperactivity, impulsivity, aggression, self-abusive behaviors, depression).","definition_xrefs":["Orphanet:254351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 7","termid":"MONDO:0016906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal 7q11.23 microdeletion syndrome","secondary_identifiers":["UMLS:C3150999","OMIM:613729","MEDGEN:462349","GARD:17218"],"synonyms":[{"name":"chromosome 7q11.23 deletion syndrome, distal, 1.2-MB","type":"related"},{"name":"chromosome 7q11.23 deletion syndrome, distal, 1.2mb","type":"exact"},{"name":"distal chromosome 7Q11.23 deletion syndrome","type":"related"},{"name":"distal del(7)(q11.23)","type":"exact"},{"name":"distal monosomy 7q11.23","type":"exact"}],"termid":"MONDO:0013393","xrefs":{"Monarch":{"xref_id":"0013393"}}}


id: MONDO:1012985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune disease, non-human animal","termid":"MONDO:1012985","xrefs":{"Monarch":{"xref_id":"1012985"}}}


id: PBO:0071080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 82","termid":"PBO:0071080"}


id: MONDO:0002012
data:
  {"annotated_genes":["SJAG_00947","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013661"},{"annotations":[87031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"}]},"cv_name":"mondo","definition":"A rare autosomal recessive inherited disorder caused by mutations of the MUT, MMAA, MMAB, MMADHC, and MCEE genes. It is characterized by abnormalities in the metabolism of lipids and proteins. Signs and symptoms usually appear early in life and vary from mild to life threatening. They include vomiting, dehydration, hypotonia, developmental delays, hepatomegaly, lethargy, intellectual disabilities, and chronic kidney disease.","definition_xrefs":["NCIT:C98986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn organic aciduria","termid":"MONDO:0000688"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00947":null,"SJAG_01199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"methylmalonic acidemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:42393006","DOID:14749","MEDGEN:120654","GARD:7033","ICD9:270.7","MESH:C537358","NANDO:1200793","NANDO:2200491","ICD10CM:E71.120","UMLS:C0268583"],"synonyms":[{"name":"METHYLMALONICACIDURIA due to methylmalonic CoA mutase deficiency","type":"narrow"},{"name":"METHYLMALONICACIDURIA, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin--Cbl A","type":"narrow"},{"name":"METHYLMALONICACIDURIA, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin--Cbl B","type":"narrow"},{"name":"methylmalonic acidemia, cblA type","type":"narrow"},{"name":"methylmalonic acidemia, cblB type","type":"narrow"},{"name":"methylmalonic aciduria","type":"exact"},{"name":"methylmalonic aciduria cblB type","type":"narrow"},{"name":"methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency","type":"narrow"},{"name":"methylmalonic aciduria mut type","type":"narrow"},{"name":"methylmalonic aciduria type cblA","type":"narrow"},{"name":"methylmalonic aciduria type cblB","type":"narrow"},{"name":"methylmalonic aciduria, mut type","type":"narrow"},{"name":"methylmalonic aciduria, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin, cblA type","type":"narrow"},{"name":"methylmalonic aciduria, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin, cblB type","type":"narrow"}],"termid":"MONDO:0002012","terms_by_termid":{"MONDO:0010184":null,"MONDO:0013661":null},"xrefs":{"Monarch":{"xref_id":"0002012"}}}


id: FYPO:0006018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer nuclear pore complexes than normal.","definition_xrefs":["PomBase:mah","PMID:28242692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased nuclear pore density","synonyms":[{"name":"decreased NPC density","type":"exact"},{"name":"decreased nuclear pore complex density","type":"exact"},{"name":"decreased nuclear pore density during mitotic cell cycle","type":"exact"},{"name":"decreased nuclear pore density during vegetative growth","type":"exact"},{"name":"nuclear pore complexes present in decreased number","type":"exact"},{"name":"nuclear pores present in decreased number","type":"exact"},{"name":"reduced nuclear pore density","type":"exact"}],"termid":"FYPO:0006018"}


id: PBO:0041180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 3 member A2","termid":"PBO:0041180"}


id: MONDO:0007902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of lichen planus that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lichen planus, familial","secondary_identifiers":["OMIM:151620","MEDGEN:372036","MESH:C563624","UMLS:C1835402"],"synonyms":[{"name":"hereditary lichen planus","type":"exact"},{"name":"lichen planus, familial","type":"exact"}],"termid":"MONDO:0007902","xrefs":{"Monarch":{"xref_id":"0007902"}}}


id: GO:0106418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + UDP-N-acetyl-alpha-D-muramate + L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate = ADP + phosphate + UDP-N-acetylmuramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate.","definition_xrefs":["PMID:17384195","PMID:8808921","RHEA:29563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramate-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate ligase activity","secondary_identifiers":["EC:6.3.2.45"],"synonyms":[{"name":"murein peptide ligase","type":"related"}],"termid":"GO:0106418"}


id: GO:0060754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of mast cell chemotaxis. Mast cell chemotaxis is the movement of a mast cell in response to an external stimulus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"regulation of mast cell chemotaxis","termid":"GO:0060753"},{"relation_name":"positively_regulates","term_name":"mast cell chemotaxis","termid":"GO:0002551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell chemotaxis","termid":"GO:0060754"}


id: FYPO:0004010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translation of one or more ribosomal proteins is decreased.","definition_xrefs":["PMID:2839305","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation","termid":"FYPO:0001798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased translation of ribosomal proteins during vegetative growth","synonyms":[{"name":"decreased translation of ribosomal proteins during mitotic cell cycle","type":"related"},{"name":"reduced translation of ribosomal proteins during vegetative growth","type":"exact"}],"termid":"FYPO:0004010"}


id: MONDO:0800364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX12 defect","termid":"MONDO:0100266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005244","MONDO:0019053","MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"peroxisome biogenesis disorder, complementation group 3","secondary_identifiers":["MEDGEN:356508","UMLS:C1866340"],"synonyms":[{"name":"CG3","type":"exact"}],"termid":"MONDO:0800364","xrefs":{"Monarch":{"xref_id":"0800364"}}}


id: PBO:0017036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug98","termid":"PBO:0017036"}


id: GO:0060259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the behavior associated with the intake of food.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"feeding behavior","termid":"GO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of feeding behavior","synonyms":[{"name":"regulation of feeding behaviour","type":"exact"}],"termid":"GO:0060259"}


id: FYPO:0003483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the nucleus, visible as foci or dots by microscopy, is abnormally localized such that fewer dots are observed than in normal (wild type) cells during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased punctate nuclear protein localization","termid":"FYPO:0002624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased punctate nuclear protein localization during cellular response to ionizing radiation","synonyms":[{"name":"decreased punctate nuclear protein localisation during cellular response to ionising radiation","type":"exact"},{"name":"decreased punctate nuclear protein localization during cellular response to IR","type":"exact"},{"name":"decreased punctate nuclear protein localization during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"decreased punctate nuclear protein localization during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced punctate nuclear protein localization during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003483"}


id: GO:1900706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of siderophore biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of siderophore biosynthetic process","termid":"GO:1900704"},{"relation_name":"positively_regulates","term_name":"siderophore biosynthetic process","termid":"GO:0019290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of siderophore biosynthetic process","synonyms":[{"name":"activation of siderochrome biosynthesis","type":"narrow"},{"name":"activation of siderochrome biosynthetic process","type":"narrow"},{"name":"activation of siderophore anabolism","type":"exact"},{"name":"activation of siderophore biosynthesis","type":"exact"},{"name":"activation of siderophore biosynthetic process","type":"narrow"},{"name":"activation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"activation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"activation of siderophore formation","type":"exact"},{"name":"activation of siderophore synthesis","type":"exact"},{"name":"positive regulation of siderochrome biosynthesis","type":"narrow"},{"name":"positive regulation of siderochrome biosynthetic process","type":"narrow"},{"name":"positive regulation of siderophore anabolism","type":"exact"},{"name":"positive regulation of siderophore biosynthesis","type":"exact"},{"name":"positive regulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"positive regulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"positive regulation of siderophore formation","type":"exact"},{"name":"positive regulation of siderophore synthesis","type":"exact"},{"name":"up regulation of siderochrome biosynthesis","type":"narrow"},{"name":"up regulation of siderochrome biosynthetic process","type":"narrow"},{"name":"up regulation of siderophore anabolism","type":"exact"},{"name":"up regulation of siderophore biosynthesis","type":"exact"},{"name":"up regulation of siderophore biosynthetic process","type":"exact"},{"name":"up regulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"up regulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"up regulation of siderophore formation","type":"exact"},{"name":"up regulation of siderophore synthesis","type":"exact"},{"name":"up-regulation of siderochrome biosynthesis","type":"narrow"},{"name":"up-regulation of siderochrome biosynthetic process","type":"narrow"},{"name":"up-regulation of siderophore anabolism","type":"exact"},{"name":"up-regulation of siderophore biosynthesis","type":"exact"},{"name":"up-regulation of siderophore biosynthetic process","type":"exact"},{"name":"up-regulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"up-regulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"up-regulation of siderophore formation","type":"exact"},{"name":"up-regulation of siderophore synthesis","type":"exact"},{"name":"upregulation of siderochrome biosynthesis","type":"narrow"},{"name":"upregulation of siderochrome biosynthetic process","type":"narrow"},{"name":"upregulation of siderophore anabolism","type":"exact"},{"name":"upregulation of siderophore biosynthesis","type":"exact"},{"name":"upregulation of siderophore biosynthetic process","type":"exact"},{"name":"upregulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"upregulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"upregulation of siderophore formation","type":"exact"},{"name":"upregulation of siderophore synthesis","type":"exact"}],"termid":"GO:1900706"}


id: MONDO:1012157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaesophagus that occurs in llama.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaesophagus, non-human animal","termid":"MONDO:1011660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, llama","secondary_identifiers":["OMIA:000631-9844"],"termid":"MONDO:1012157","xrefs":{"Monarch":{"xref_id":"1012157"}}}


id: MONDO:0100279
data:
  {"annotated_genes":["SJAG_02788","SJAG_04146"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87548,87547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013967"}]},"cv_name":"mondo","definition":"Any peroxisome biogenesis disorder in which the cause of the disease is a mutation in the PEX11B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02788":null,"SJAG_04146":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0006025","MONDO:0005244","MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX11B defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX11B related peroxisome biogenesis disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX11B defect","type":"exact"}],"termid":"MONDO:0100279","terms_by_termid":{"MONDO:0013967":null},"xrefs":{"Monarch":{"xref_id":"0100279"}}}


id: PBO:0028136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dense_body_present_in_nucleolus","termid":"PBO:0028136"}


id: PBO:0064362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyamine modulated factor 1","termid":"PBO:0064362"}


id: PBO:0062750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily K member 2","termid":"PBO:0062750"}


id: GO:0035680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a posterior lateral line neuromast hair cell progresses from its initial formation to its mature state. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell morphogenesis","termid":"GO:0035678"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast hair cell development","termid":"GO:0035677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast hair cell morphogenesis","termid":"GO:0035680"}


id: MONDO:0016954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 3q duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on thelong arm (q) of chromosome 3. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 3q duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Chromosome 3q duplication can be de novo or inherited from a parent with a chromosomal rearrangement such as a balanced translocation. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 3","termid":"MONDO:0016923"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 3","secondary_identifiers":["MESH:C536813","Orphanet:262851","MEDGEN:208636","icd11.foundation:1132834719","UMLS:C0795809","GARD:5345"],"synonyms":[{"name":"Duplication 3q","type":"related"},{"name":"chromosome 3, trisomy 3q","type":"related"},{"name":"chromosome 3q duplication","type":"related"},{"name":"partial duplication of chromosome 3q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 3","type":"exact"},{"name":"partial trisomy of chromosome 3q","type":"exact"},{"name":"trisomy 3q","type":"related"}],"termid":"MONDO:0016954","xrefs":{"Monarch":{"xref_id":"0016954"}}}


id: FYPO:0003761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A phenotype in which a spore germinates to produce a cell of normal morphology that undergoes one or two rounds of cell division, and all cells produced arrest the cell cycle with a septum separating a compartment with one nucleus and a second compartment with no nucleus, and then die.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable after spore germination, single or double cell division, arrest with anucleate cell (obsolete FYPO:0003761)","synonyms":[{"name":"inviable following spore germination, single or double cell division, arrest with anucleate cell","type":"exact"},{"name":"inviable germinated spore, single or double cell division, arrest with anucleate cell","type":"exact"}],"termid":"FYPO:0003761"}


id: GO:0032608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-beta due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interferon-beta production","secondary_identifiers":["GO:0035546","GO:0045350"],"synonyms":[{"name":"IFN-beta production","type":"exact"},{"name":"IFNB production","type":"exact"},{"name":"interferon-beta biosynthetic process","type":"narrow"},{"name":"interferon-beta secretion","type":"narrow"}],"termid":"GO:0032608"}


id: GO:0070571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuron projection regeneration, the regrowth of neuronal processes such as axons or dendrites following their loss or damage.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron projection development","termid":"GO:0010977"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of neuron projection regeneration","termid":"GO:0070570"},{"relation_name":"negatively_regulates","term_name":"neuron projection regeneration","termid":"GO:0031102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron projection regeneration","synonyms":[{"name":"growth cone collapse","type":"related"}],"termid":"GO:0070571"}


id: PBO:0005569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retromer complex subunit Vps35","termid":"PBO:0005569"}


id: SO:0001238
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The tanscription start site that is most frequently used for transcription of a gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"TSS","termid":"SO:0000315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major_TSS","synonyms":[{"name":"major TSS","type":"exact"},{"name":"major transcription start site","type":"exact"}],"termid":"SO:0001238"}


id: GO:0031759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an Edg-6 sphingosine 1-phosphate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial differentiation G protein-coupled receptor binding","termid":"GO:0031753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"Edg-6 sphingosine 1-phosphate receptor binding","synonyms":[{"name":"Edg-6 sphingosine 1-phosphate receptor ligand","type":"narrow"}],"termid":"GO:0031759"}


id: PBO:0004593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAseP RNAse MRP subunit Pop7 (predicted)","termid":"PBO:0004593"}


id: PBO:0069411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 672, pseudogene","termid":"PBO:0069411"}


id: PBO:0061006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHSL1 antisense RNA 1","termid":"PBO:0061006"}


id: PBO:0061241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP56 ribonucleoprotein pseudogene 2","termid":"PBO:0061241"}


id: PBO:0053957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1264","termid":"PBO:0053957"}


id: FYPO:0006422
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id: GO:0043507
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id: MONDO:0001514
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id: GO:1900226
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id: PBO:0003153
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id: GO:0071166
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id: MONDO:0000598
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A language disorder that involves an acquired impairment of any language modality such as producing or comprehending spoken or written language.","definition_xrefs":["DOID:0060046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"language disorder","termid":"MONDO:0004750"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aphasia","secondary_identifiers":["icd11.foundation:1167055901","ICD10CM:R47.01","UMLS:C0003537","MEDGEN:8159","MESH:D001037"],"termid":"MONDO:0000598","xrefs":{"Monarch":{"xref_id":"0000598"}}}


id: PBO:0046057
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit H","termid":"PBO:0046057"}


id: FYPO:0002804
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id: GO:0016788
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id: GO:0019616
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id: SO:0001221
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id: PomGeneEx:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is present at levels, or produced at rates, that vary under two or more sets of conditions or over a time course.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluctuates","synonyms":[{"name":"gene expression fluctuates","type":"exact"},{"name":"gene product level fluctuates","type":"exact"}],"termid":"PomGeneEx:0000008"}


id: PATO:0000117
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a bearer by virtue of the bearer's physical magnitude.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"size","termid":"PATO:0000117"}


id: MONDO:0958162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B lymphoblastic leukemia/lymphoma that is associated with DUX4 gene rearrangement.","definition_xrefs":["DOID:0081412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"B acute lymphoblastic leukemia with DUX4 rearrangement","secondary_identifiers":["MEDGEN:1848969","UMLS:C5855478","NCIT:C199232"],"termid":"MONDO:0958162","xrefs":{"Monarch":{"xref_id":"0958162"}}}


id: GO:0102780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + sitosterol + O2 + NADPH = (22alpha)-hydroxy-sitosterol + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sitosterol hydroxylase activity (obsolete GO:0102780)","termid":"GO:0102780"}


id: PBO:0091964
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously curated onto incorrect strand","termid":"PBO:0091964"}


id: MONDO:0013994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the TMEM231 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome with ocular defect","termid":"MONDO:0016364"},{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0020022"],"is_obsolete":false,"name":"Joubert syndrome 20","secondary_identifiers":["MEDGEN:767149","UMLS:C3554235","GARD:15887","OMIM:614970","DOID:0110989"],"synonyms":[{"name":"JBTS20","type":"exact"},{"name":"Joubert syndrome 20","type":"exact"},{"name":"Joubert syndrome caused by mutation in TMEM231","type":"exact"},{"name":"Joubert syndrome type 20","type":"exact"},{"name":"TMEM231 Joubert syndrome","type":"exact"}],"termid":"MONDO:0013994","xrefs":{"Monarch":{"xref_id":"0013994"}}}


id: FYPO:0008362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in a population contain variable numbers of lipid droplets. Some cells may contain more or less lipid droplets than normal, while others may lack any detectable lipid droplets.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"variable cellular lipid droplet content","termid":"FYPO:0008362"}


id: PBO:0088662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic protease, yapsin family, unknown specificity Yps1","termid":"PBO:0088662"}


id: GO:1905215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA binding.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA binding","synonyms":[{"name":"down regulation of RNA binding","type":"exact"},{"name":"down-regulation of RNA binding","type":"exact"},{"name":"downregulation of RNA binding","type":"exact"},{"name":"inhibition of RNA binding","type":"narrow"}],"termid":"GO:1905215"}


id: FYPO:0007717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to potassium chloride. Cells stop growing (and may die) at a concentration of potassium nitrate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to potassium nitrate","synonyms":[{"name":"hypersensitive to potassium nitrate","type":"exact"},{"name":"sensitive to KNO3","type":"exact"},{"name":"sensitive to potassium nitrate during mitotic cell cycle","type":"related"},{"name":"sensitive to potassium nitrate during vegetative growth","type":"exact"}],"termid":"FYPO:0007717"}


id: MONDO:0004915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0004915 (obsolete MONDO:0004915)","termid":"MONDO:0004915","xrefs":{"Monarch":{"xref_id":"0004915"}}}


id: PBO:0059920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 6","termid":"PBO:0059920"}


id: MONDO:0021659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm composed of a mixture of neuroendocrine cells with morphologic and immunohistochemical characteristics of carcinoid tumor and malignant glandular cells.","definition_xrefs":["NCIT:C4139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"combined carcinoid and adenocarcinoma","secondary_identifiers":["ICDO:8244/3","MESH:C538230","UMLS:C0334302","MEDGEN:83124","ICDO:8245/3"],"synonyms":[{"name":"adenocarcinoid neoplasm","type":"exact"},{"name":"adenocarcinoid tumor","type":"exact"},{"name":"adenocarcinoid tumour","type":"exact"},{"name":"combined carcinoid and adenocarcinoma","type":"exact"},{"name":"combined carcinoid neoplasm and adenocarcinoma","type":"exact"},{"name":"combined carcinoid tumor and adenocarcinoma","type":"exact"},{"name":"combined carcinoid tumour and adenocarcinoma","type":"exact"},{"name":"composite carcinoid","type":"exact"},{"name":"composite carcinoid neoplasm","type":"exact"},{"name":"composite carcinoid tumor","type":"exact"},{"name":"composite carcinoid tumour","type":"exact"},{"name":"mixed carcinoid neoplasm","type":"exact"},{"name":"mixed carcinoid tumor","type":"exact"},{"name":"mixed carcinoid tumour","type":"exact"}],"termid":"MONDO:0021659","xrefs":{"Monarch":{"xref_id":"0021659"}}}


id: MONDO:0012938
data:
  {"annotated_genes":["SJAG_00465","SJAG_02280"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87120,87121],"is_not":false,"summary":null,"term":"MONDO:0012938"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the RPL11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00465":null,"SJAG_02280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:612562","DOID:0111878","GARD:15569","MEDGEN:436451","NCIT:C176916","UMLS:C2675512","MESH:C567254"],"synonyms":[{"name":"DBA7","type":"related"},{"name":"Diamond-Blackfan Anaemia type 7","type":"exact"},{"name":"Diamond-Blackfan Anemia type 7","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in RPL11","type":"exact"},{"name":"Diamond-Blackfan anemia 7","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in RPL11","type":"exact"},{"name":"RPL11 Diamond-Blackfan anaemia","type":"exact"},{"name":"RPL11 Diamond-Blackfan anemia","type":"exact"}],"termid":"MONDO:0012938","terms_by_termid":{"MONDO:0012938":null},"xrefs":{"Monarch":{"xref_id":"0012938"}}}


id: PBO:0089622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Prp18","termid":"PBO:0089622"}


id: PBO:0005603
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.2.1.1","termid":"PBO:0005603"}


id: PBO:0057342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 526b","termid":"PBO:0057342"}


id: MONDO:1012696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A necrotizing encephalomyelopathy that occurs in calves of the Angus breed of cattle and is characterized by symmetrical degenerative lesions in the brain and spinal cord.","definition_xrefs":["PMID:15080447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necrotising myelopathy, non-human animal","termid":"MONDO:1011850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifocal symmetrical necrotizing encephalomyelopathy, Angus cattle","secondary_identifiers":["OMIA:001488-9913"],"termid":"MONDO:1012696","xrefs":{"Monarch":{"xref_id":"1012696"}}}


id: PBO:0034608
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_cells_with_1C_DNA_content","termid":"PBO:0034608"}


id: GO:0032185
data:
  {"annotated_genes":["SJAG_01143","SJAG_00514","SJAG_04375","SJAG_01658","SJAG_00118","SJAG_00663","SJAG_03146","SJAG_02683"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110998],"is_not":false,"summary":null,"term":"GO:0032185"},{"annotations":[100439,104236,72786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000921"},{"annotations":[117336,102083,70528,98145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031106"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising septin complexes and their associated proteins.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_01143":null,"SJAG_01658":null,"SJAG_02683":null,"SJAG_03146":null,"SJAG_04375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"septin cytoskeleton organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"septin cytoskeleton organisation","type":"exact"},{"name":"septin cytoskeleton organization and biogenesis","type":"related"}],"termid":"GO:0032185","terms_by_termid":{"GO:0000921":null,"GO:0031106":null,"GO:0032185":null}}


id: PBO:0031522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA-7-methylguanine_glycosylase_activity","termid":"PBO:0031522"}


id: GO:0002575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a basophil in response to an external stimulus.","definition_xrefs":["PMID:11292027","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte chemotaxis","termid":"GO:0071621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil chemotaxis","termid":"GO:0002575"}


id: GO:0008931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete murein DD-endopeptidase activity (obsolete GO:0008931)","synonyms":[{"name":"murein DD-endopeptidase activity","type":"exact"}],"termid":"GO:0008931"}


id: GO:0000463
data:
  {"annotated_genes":["SJAG_03425","SJAG_02427","SJAG_00882","SJAG_05223","SJAG_00722","SJAG_02374","SJAG_00749","SJAG_02275","SJAG_02830","SJAG_04289","SJAG_01581","SJAG_01606","SJAG_05190","SJAG_01551","SJAG_01821","SJAG_00752","SJAG_04108","SJAG_04492","SJAG_04669","SJAG_03789"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70718,71494,72643,72662,73594,73866,74147,74457,75345,75588,76269,78638,79109,80058,98270,98303],"is_not":false,"summary":null,"term":"GO:0000463"},{"annotations":[95297,92036,71873,104429],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of LSU-rRNA","termid":"GO:0000470"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00882":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01606":null,"SJAG_01821":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02427":null,"SJAG_02830":null,"SJAG_03425":null,"SJAG_03789":null,"SJAG_04108":null,"SJAG_04289":null,"SJAG_04492":null,"SJAG_04669":null,"SJAG_05190":null,"SJAG_05223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000463","terms_by_termid":{"GO:0000448":null,"GO:0000463":null}}


id: FYPO:0007874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which exocytosis occurs to a lower extent than normal at the shmoo tip.","definition_xrefs":["PMID:34382996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal exocytosis","termid":"FYPO:0007873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased exocytosis at shmoo tip","synonyms":[{"name":"decreased exocytosis at mating projection tip","type":"exact"},{"name":"decreased exocytosis at shmoo projection","type":"exact"},{"name":"reduced exocytosis at shmoo tip","type":"exact"}],"termid":"FYPO:0007874"}


id: FYPO:0007450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to one or both cell tip(s), but remains there for a shorter time than normal.","definition_xrefs":["PMID:12789340","PMID:15809031","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal maintenance of protein location at cell tip during vegetative growth","termid":"FYPO:0005464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased maintenance of protein location in cell cortex of cell tip","synonyms":[{"name":"decreased maintenance of protein location in cell cortex of cell tip during mitotic cell cycle","type":"related"},{"name":"decreased maintenance of protein location in cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"reduced maintenance of protein location in cell cortex of cell tip","type":"exact"}],"termid":"FYPO:0007450"}


id: GO:0102217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: n ATP + n H2O + a 6-phosphogluco-maltodextrin = n AMP + n hydrogenphosphate + a poly-6-phosphogluco-maltodextrin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-phosphoglucan, water dikinase activity (obsolete GO:0102217)","termid":"GO:0102217"}


id: GO:0047969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxylate + H2O + O2 = H2O2 + H+ + oxalate.","definition_xrefs":["RHEA:14837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glyoxylate oxidase activity","secondary_identifiers":["KEGG_REACTION:R00466","Reactome:R-HSA-389862","EC:1.2.3.5","MetaCyc:GLYOXYLATE-OXIDASE-RXN"],"synonyms":[{"name":"glyoxylate:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047969"}


id: GO:0016438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + queuosine34 in tRNA(Asp) = GDP + H+ + O-4''-alpha-D-mannosylqueuosine34 in tRNA(Asp).","definition_xrefs":["RHEA:12885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0016740","GO:0140098","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"tRNA-queuosine(34) beta-mannosyltransferase activity","secondary_identifiers":["EC:2.4.1.110","MetaCyc:2.4.1.110-RXN"],"synonyms":[{"name":"GDP-mannose:tRNAAsp-queuosine O-5''-beta-D-mannosyltransferase activity","type":"related"},{"name":"tRNA-queuosine beta-mannosyltransferase activity","type":"broad"}],"termid":"GO:0016438"}


id: PBO:0119274
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YOR152C","termid":"PBO:0119274"}


id: PBO:0063418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 3A","termid":"PBO:0063418"}


id: PBO:0113319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the nonsense-mediated mRNA decay (NMD) pathway; acts as a scaffold protein bridging Nam7p and Upf3p; involved in telomere maintenance; contains an acidic domain and three middle domains of eukaryotic initiation factor 4G (mIF4G) with aspartic 59 of mIF4G-1 important for NMD activity and translation termination accuracy","termid":"PBO:0113319"}


id: GO:0001522
data:
  {"annotated_genes":["SJAG_04065","SJAG_03125","SJAG_03213","SJAG_03755","SJAG_03572","SJAG_02978","SJAG_04754","SJAG_01234","SJAG_00566","SJAG_00319","SJAG_01172","SJAG_00088","SJAG_00083"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65394,69196],"is_not":false,"summary":null,"term":"GO:0001522"},{"annotations":[75988,57318,106546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000455"},{"annotations":[78818,80463,76044,71090,73314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990481"},{"annotations":[78129,80467,90354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031118"},{"annotations":[74859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000454"},{"annotations":[106608,106547,114599,80468,78130,59270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031120"},{"annotations":[91549,76046,102807,78820,106548,73316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031119"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine within an RNA molecule.","definition_xrefs":["GOC:mah","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00088":null,"SJAG_00319":null,"SJAG_00566":null,"SJAG_01172":null,"SJAG_01234":null,"SJAG_02978":null,"SJAG_03125":null,"SJAG_03213":null,"SJAG_03572":null,"SJAG_03755":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Wikipedia:Pseudouridine","Wikipedia:Pseudouridylation"],"synonyms":[{"name":"pseudouridylation","type":"exact"}],"termid":"GO:0001522","terms_by_termid":{"GO:0000454":null,"GO:0000455":null,"GO:0001522":null,"GO:0031118":null,"GO:0031119":null,"GO:0031120":null,"GO:1990481":null}}


id: MONDO:0008340
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital ptosis is characterized by superior eyelid drop present at birth.","definition_xrefs":["Orphanet:91411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ptosis","termid":"MONDO:0000728"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ptosis, hereditary congenital, 1","secondary_identifiers":["OMIM:178300","SCTID:268163008","GARD:16798","MedDRA:10015996","UMLS:C1867438","DOID:0060261","HP:0007970","ICD9:743.61","MESH:C566737","MEDGEN:357987","NCIT:C27049"],"synonyms":[{"name":"PTOS1","type":"related"},{"name":"congenital eyelid ptosis","type":"exact"},{"name":"congenital ptosis","type":"exact"},{"name":"congenital ptosis (disease)","type":"exact"},{"name":"ptosis, congenital","type":"exact"},{"name":"ptosis, hereditary congenital 1","type":"related"},{"name":"ptosis, hereditary congenital, 1","type":"exact"}],"termid":"MONDO:0008340","xrefs":{"Monarch":{"xref_id":"0008340"}}}


id: FYPO:0001469
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the steady-state intracellular calcium ion (Ca2+) concentration increases to a greater extent than normal following an extracellular Ca2+ stimulus. Normally, a dose-dependent increased steady-state Ca2+ concentration is reached within 2-3 minutes of extracellular Ca2+ addition, and is sustained for several hours.","definition_xrefs":["PMID:21811607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal steady-state intracellular calcium level following extracellular calcium stimulus","termid":"FYPO:0001468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased steady-state intracellular calcium level following extracellular calcium stimulus","synonyms":[{"name":"greater increase in steady-state intracellular calcium level following extracellular calcium stimulus during vegetative growth","type":"exact"},{"name":"increased steady-state intracellular calcium level following extracellular calcium stimulus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001469"}


id: PBO:0081169
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 1","termid":"PBO:0081169"}


id: PBO:0001052
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere localized protein Cnl2","termid":"PBO:0001052"}


id: MONDO:0012622
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  {"annotated_genes":["SJAG_04094"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87268],"is_not":false,"summary":null,"term":"MONDO:0012622"}]},"cv_name":"mondo","definition":"This disease is characterized by progressive cerebellar ataxia with pyramidal and spinal cord dysfunction, associated with distinctive MRI anomalies and increased lactate in the abnormal white matter.","definition_xrefs":["Orphanet:137898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04094":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0004069"],"is_obsolete":false,"name":"leukoencephalopathy with brain stem and spinal cord involvement-high lactate syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:703537008","MEDGEN:370845","UMLS:C1970180","GARD:12652","MESH:C567009","NORD:1941","OMIM:611105"],"synonyms":[{"name":"LBSL","type":"exact"},{"name":"Leukoencephalopathy with Brain Stem and Spinal Cord Involvement and Lactate Elevation","type":"exact"},{"name":"leukoencephalopathy with brain stem and spinal cord involvement - high lactate","type":"related"},{"name":"leukoencephalopathy with brain stem and spinal cord involvement - lactate elevation","type":"related"},{"name":"leukoencephalopathy with brain stem and spinal cord involvement and lactate elevation","type":"related"},{"name":"leukoencephalopathy with brain stem and spinal cord involvement-high lactate syndrome","type":"exact"},{"name":"leukoencephalopathy with brain stem and spinal cord involvement-lactate elevation syndrome","type":"exact"},{"name":"leukoencephalopathy with brainstem and spinal cord involvement and lactate elevation","type":"related"},{"name":"mitochondrial aspartyl-tRNA synthetase deficiency","type":"related"}],"termid":"MONDO:0012622","terms_by_termid":{"MONDO:0012622":null},"xrefs":{"Monarch":{"xref_id":"0012622"}}}


id: MONDO:0014104
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  {"annotated_genes":["SJAG_01945"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85374],"is_not":false,"summary":null,"term":"MONDO:0014104"}]},"cv_name":"mondo","definition":"Any dysequilibrium syndrome in which the cause of the disease is a mutation in the ATP8A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, intellectual disability, and dysequilibrium","termid":"MONDO:0009133"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01945":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615268","UMLS:C3808977","MEDGEN:815307","DOID:0070559","GARD:15930"],"synonyms":[{"name":"ATP8A2 dysequilibrium syndrome","type":"exact"},{"name":"CAMRQ4","type":"related"},{"name":"cerebellar ataxia and intellectual disability with or without quadrupedal locomotion 4","type":"related"},{"name":"cerebellar ataxia and mental retardation with or without quadrupedal locomotion 4","type":"related"},{"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome 4","type":"exact"},{"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome type 4","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium syndrome 4","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium syndrome type 4","type":"exact"},{"name":"dysequilibrium syndrome caused by mutation in ATP8A2","type":"exact"}],"termid":"MONDO:0014104","terms_by_termid":{"MONDO:0014104":null},"xrefs":{"Monarch":{"xref_id":"0014104"}}}


id: GO:1990509
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex involved in the disassembly of Mago-Y14 from the spliced mRNA during first round of translation, independently of the translational machinery. Conserved from fission yeast to humans.","definition_xrefs":["GOC:bhm","PMID:14968132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PYM-mago-Y14 complex","synonyms":[{"name":"PYM-mago-RNA-binding protein 8A complex","type":"exact"},{"name":"wibg-mago-tsu complex","type":"exact"}],"termid":"GO:1990509"}


id: PBO:0090075
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex transmembrane subunit, C-terminal UBA domain Dsc2","termid":"PBO:0090075"}


id: GO:0000502
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  {"annotated_genes":["SJAG_00128","SJAG_03733","SJAG_01131","SJAG_01014","SJAG_02992","SJAG_02341","SJAG_04477","SJAG_04088","SJAG_03151","SJAG_02900","SJAG_00738","SJAG_04572","SJAG_00762","SJAG_03321","SJAG_02502","SJAG_00778","SJAG_04357","SJAG_00766","SJAG_01203","SJAG_04484","SJAG_04144","SJAG_03638","SJAG_01652","SJAG_05316","SJAG_04969","SJAG_04541","SJAG_03408","SJAG_00808","SJAG_02562","SJAG_04211","SJAG_00712","SJAG_04229","SJAG_04888","SJAG_04306","SJAG_01544","SJAG_01489"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110641],"is_not":false,"summary":null,"term":"GO:0000502"},{"annotations":[75501,72278,78721,73301,72878,75749,70154],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019773"},{"annotations":[57446,63677,61422,61824,64484,56994,69841],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019774"},{"annotations":[73991,73457,78484,79926,78759,77414,78301,79480,80203],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008540"},{"annotations":[62622,71637,78523,74604,99271,71742,74591,76810,73922,79696,111537,115459,73167],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008541"}]},"cv_name":"cellular_component","definition":"A large multisubunit complex which catalyzes protein degradation, found in eukaryotes, archaea and some bacteria. In eukaryotes, this complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core.","definition_xrefs":["GOC:rb","Wikipedia:Proteasome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"endopeptidase complex","termid":"GO:1905369"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00128":null,"SJAG_00712":null,"SJAG_00738":null,"SJAG_00762":null,"SJAG_00766":null,"SJAG_00778":null,"SJAG_00808":null,"SJAG_01014":null,"SJAG_01131":null,"SJAG_01203":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_01652":null,"SJAG_02341":null,"SJAG_02502":null,"SJAG_02562":null,"SJAG_02900":null,"SJAG_02992":null,"SJAG_03151":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_03638":null,"SJAG_03733":null,"SJAG_04088":null,"SJAG_04144":null,"SJAG_04211":null,"SJAG_04229":null,"SJAG_04306":null,"SJAG_04357":null,"SJAG_04477":null,"SJAG_04484":null,"SJAG_04541":null,"SJAG_04572":null,"SJAG_04888":null,"SJAG_04969":null,"SJAG_05316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"26S proteasome","type":"narrow"},{"name":"proteasome","type":"exact"}],"termid":"GO:0000502","terms_by_termid":{"GO:0000502":null,"GO:0008540":null,"GO:0008541":null,"GO:0019773":null,"GO:0019774":null}}


id: MONDO:0700133
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adenoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenoma, non-human","termid":"MONDO:0700133","xrefs":{"Monarch":{"xref_id":"0700133"}}}


id: GO:1905348
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id: PATO:0002006
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id: GO:0030561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of 2'-O-ribose methylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"RNA 2'-O-ribose methylation guide activity","termid":"GO:0030561"}


id: GO:0071806
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id: PBO:0045611
data:
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id: PBO:0014581
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutaric aciduria 2A","termid":"PBO:0014581"}


id: MONDO:1040043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the BBS1 gene.","definition_xrefs":["PMID:23847139","PMID:24026985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBS1-related ciliopathy","synonyms":[{"name":"BBS1-related ciliopathy","type":"exact"}],"termid":"MONDO:1040043","xrefs":{"Monarch":{"xref_id":"1040043"}}}


id: PBO:0108564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin Cnt5","termid":"PBO:0108564"}


id: PBO:0050241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 19","termid":"PBO:0050241"}


id: PBO:0075334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SORBS2 antisense RNA 1","termid":"PBO:0075334"}


id: MONDO:0013043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atypical hemolytic uremic syndrome with complement gene abnormality","termid":"MONDO:0035290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"atypical hemolytic-uremic syndrome with C3 anomaly","secondary_identifiers":["GARD:18555","MEDGEN:442875","Orphanet:93575","UMLS:C2752037","OMIM:612925"],"synonyms":[{"name":"AHUS5","type":"related"},{"name":"Ahus, susceptibility to, 5","type":"related"},{"name":"D-HUS with C3 anomaly","type":"exact"},{"name":"aHUS with C3 anomaly","type":"exact"},{"name":"atypical HUS with C3 anomaly","type":"exact"},{"name":"hemolytic uremic syndrome with DGKE deficiency","type":"exact"},{"name":"hemolytic uremic syndrome, atypical, susceptibility to, 5","type":"related"},{"name":"hemolytic uremic syndrome, atypical, susceptibility to, type 5","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhea with C3 anomaly","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhoea with C3 anomaly","type":"exact"},{"name":"susceptibility to atypical hemolytic uremic syndrome 5","type":"related"}],"termid":"MONDO:0013043","xrefs":{"Monarch":{"xref_id":"0013043"}}}


id: PBO:0080586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 11","termid":"PBO:0080586"}


id: GO:0050697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + trichloroethene = (Z)-1,2-dichloroethene + A + chloride + H+.","definition_xrefs":["RHEA:67992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"trichloroethene reductive dehalogenase activity","secondary_identifiers":["MetaCyc:TCEREDCHLOR-RXN","UM-BBD_enzymeID:r0350","UM-BBD_enzymeID:r0932"],"synonyms":[{"name":"1,1,2-trichloroethene reductive dehalogenase activity","type":"exact"},{"name":"1,1,2-trichloroethylene reductive dehalogenase activity","type":"exact"},{"name":"TCE-reductive dehalogenase activity","type":"exact"}],"termid":"GO:0050697"}


id: MONDO:0018907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, partly cystic, epithelial tumor of the sellar region, presumably derived from Rathke pouch epithelium. It affects mainly children and young adults. There are two clinicopathological forms: adamantinomatous craniopharyngioma and papillary craniopharyngioma. The most significant factor associated with recurrence is the extent of surgical resection, with lesions greater than 5 cm in diameter carrying a markedly worse prognosis. (Adapted from WHO)","definition_xrefs":["NCIT:C2964"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary endocrine growth disease","termid":"MONDO:0015514"},{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"squamous cell neoplasm","termid":"MONDO:0002532"},{"relation_name":"is_a","term_name":"sella turcica neoplasm","termid":"MONDO:0002720"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniopharyngioma","secondary_identifiers":["MEDGEN:41339","MESH:D003397","NANDO:2200091","NORD:1996","Orphanet:54595","GARD:10486","SCTID:189179009","DOID:3840","ICDO:9350/1","UMLS:C0010276","ICD9:237.0","EFO:1000209","MedDRA:10011318"],"synonyms":[{"name":"Adamantinomatous tumor","type":"related"},{"name":"Adamantinomatous tumour","type":"related"},{"name":"Dysodontogenic epithelial tumor","type":"related"},{"name":"Dysodontogenic epithelial tumour","type":"related"},{"name":"Rathke pouch neoplasm","type":"exact"},{"name":"Rathke pouch tumor","type":"exact"},{"name":"Rathke pouch tumour","type":"exact"},{"name":"Rathke's pouch neoplasm","type":"exact"},{"name":"Rathke's pouch tumor","type":"exact"},{"name":"Rathke's pouch tumour","type":"exact"},{"name":"craniopharyngeal duct tumor","type":"related"},{"name":"craniopharyngeal duct tumour","type":"related"},{"name":"craniopharyngioma (WHO grade I)","type":"exact"},{"name":"craniopharyngioma (morphologic abnormality)","type":"exact"},{"name":"craniopharyngioma, benign","type":"exact"},{"name":"cystoma","type":"related"},{"name":"neoplasm of Rathke's pouch","type":"exact"},{"name":"tumor of Rathke's pouch","type":"exact"},{"name":"tumour of Rathke's pouch","type":"exact"}],"termid":"MONDO:0018907","xrefs":{"Monarch":{"xref_id":"0018907"}}}


id: GO:0034940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-oxo-4,5-dihydropyrrole-2-carboxylate + 2 H2O = 2-oxoglutarate + NH3.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-oxo-4,5-dihydropyrrole-2-carboxylate amidase activity (obsolete GO:0034940)","termid":"GO:0034940"}


id: PBO:0043413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cap methyltransferase 2","termid":"PBO:0043413"}


id: GO:0010291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-beta-carotene + 4 H+ + 2 O2 + 4 reduced [2Fe-2S]-[ferredoxin] = all-trans-zeaxanthin + 2 H2O + 4 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["PMID:16492736","RHEA:30331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"beta-carotene 3-hydroxylase activity","secondary_identifiers":["EC:1.14.15.24","GO:0042411","MetaCyc:RXN1F-152"],"synonyms":[{"name":"beta-carotene hydroxylase activity","type":"narrow"},{"name":"carotene beta-ring hydroxylase activity","type":"related"}],"termid":"GO:0010291"}


id: FYPO:0003225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of microtubule polymerization, i.e. the addition of tubulin dimers to a microtubule, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:23051734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"},{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal rate of microtubule polymerization during vegetative growth","synonyms":[{"name":"normal microtubule polymerization rate","type":"exact"},{"name":"normal rate of microtubule growth","type":"related"},{"name":"normal rate of microtubule polymerisation","type":"exact"},{"name":"normal rate of microtubule polymerisation during vegetative growth","type":"exact"},{"name":"normal rate of microtubule polymerization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003225"}


id: FYPO:0000199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of long tract gene conversion is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased gene conversion during vegetative growth","termid":"FYPO:0005788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"increased long tract gene conversion","synonyms":[{"name":"DNA recombination defects, long tract gene conversion, increased","type":"exact"},{"name":"increased long tract gene conversion during mitotic cell cycle","type":"related"},{"name":"increased long tract gene conversion during vegetative growth","type":"exact"}],"termid":"FYPO:0000199"}


id: GO:0102166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + an N-acetyl-alpha-D-glucosaminyl-L-threonine-[glycoprotein] = N-acetyl-alpha-D-glucosaminide + a [protein]-L-threonine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-threonine O-N-acetyl-alpha-D-glucosaminase activity (obsolete GO:0102166)","termid":"GO:0102166"}


id: GO:0035595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside + H2O = 1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside + acetate. This reaction is the hydrolysis of an acetyl group from N-acetylglucosaminylinositol.","definition_xrefs":["RHEA:26180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0019213","GO:0016810"],"is_obsolete":false,"name":"N-acetylglucosaminylinositol deacetylase activity","secondary_identifiers":["EC:3.5.1.103","KEGG_REACTION:R09651","MetaCyc:RXN1G-2"],"synonyms":[{"name":"1-(2-acetamido-2-deoxy-alpha-D-glucopyranosyl)-1D-myo-inositol acetylhydrolase activity","type":"related"},{"name":"1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase activity","type":"related"},{"name":"GlcNAc-Ins deacetylase activity","type":"exact"},{"name":"N-acetyl-1D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase activity","type":"related"}],"termid":"GO:0035595"}


id: PBO:0045901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen-induced osteoclastogenesis regulator 1","termid":"PBO:0045901"}


id: PR:O13944
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An oxysterol-binding protein-related protein 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol-binding protein homolog C23H4.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.01c","secondary_identifiers":["UniProtKB:O13944"],"synonyms":[{"name":"Spom972h-OSBPL11","type":"exact"}],"termid":"PR:O13944"}


id: PBO:0087194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rpd3L histone deacetylase complex subunit; key transcriptional regulator of early meiotic genes; involved in chromatin remodeling and transcriptional repression via DNA looping; binds URS1 upstream regulatory sequence, represses transcription by recruiting conserved histone deacetylase Rpd3p (through co-repressor Sin3p) and chromatin-remodeling factor Isw2p; couples metabolic responses to nutritional cues with initiation and progression of meiosis","termid":"PBO:0087194"}


id: PBO:0074847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 37","termid":"PBO:0074847"}


id: PBO:0050459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox and leucine zipper encoding","termid":"PBO:0050459"}


id: MONDO:0021183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"deltaretrovirus infections","termid":"MONDO:0021184"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTLV-2 infection","secondary_identifiers":["SCTID:425740005","UMLS:C0020102","EFO:1001349","MEDGEN:42515","MESH:D015491"],"synonyms":[{"name":"HTLV II INFECT","type":"related"},{"name":"HTLV-2 infection","type":"exact"},{"name":"HTLV-II Infection","type":"related"},{"name":"HTLV-II Infections","type":"related"},{"name":"HTLV-II infection","type":"related"},{"name":"Human T lymphotropic Virus 2 Infection","type":"related"},{"name":"Human T lymphotropic Virus 2 Infections","type":"related"},{"name":"Human T-lymphotropic Virus 2 Infection","type":"related"},{"name":"Human T-lymphotropic Virus 2 Infections","type":"related"},{"name":"Human T-lymphotropic virus 2 infection","type":"related"},{"name":"INFECT HTLV II","type":"related"},{"name":"Infection, HTLV-II","type":"related"},{"name":"Infections, HTLV II","type":"related"},{"name":"Infections, HTLV-II","type":"related"}],"termid":"MONDO:0021183","xrefs":{"Monarch":{"xref_id":"0021183"}}}


id: PBO:0081146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP64 zinc finger protein pseudogene 1","termid":"PBO:0081146"}


id: PBO:0051896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 5","termid":"PBO:0051896"}


id: GO:0075285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of multicellular or syncytial spore via septations derived from meiosis. A multicellular or syncytial spore is a structure that can be used for dissemination, for survival of adverse conditions because of its heat and desiccation resistance, and/or for reproduction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual sporulation","termid":"GO:0034293"},{"relation_name":"is_a","term_name":"sporulation resulting in formation of a multicellular or syncytial spore","termid":"GO:0075283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"sexual sporulation resulting in formation of a multicellular or syncytial spore","termid":"GO:0075285"}


id: MONDO:0100102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any fetal akinesia deformation sequence in which the cause of the disease is a mutation in the RAPSN gene.","definition_xrefs":["OMIM:618388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fetal akinesia deformation sequence","termid":"MONDO:0008824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal akinesia deformation sequence 2","secondary_identifiers":["UMLS:C4760576","DOID:0111378","GARD:16495","MEDGEN:1678048"],"synonyms":[{"name":"FADS2","type":"exact"}],"termid":"MONDO:0100102","xrefs":{"Monarch":{"xref_id":"0100102"}}}


id: PBO:0091129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit Sap18","termid":"PBO:0091129"}


id: MONDO:0003878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A uveal melanoma that arises from the choroid. It is the most common primary malignant intraocular tumor. It usually affects Caucasians of northern European descent. It usually remains asymptomatic for a long period. When signs and symptoms occur, they include blurred vision, visual field loss, floaters, and ocular pain. Tumor size is the most important factor that relates to prognosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveal melanoma","termid":"MONDO:0006486"},{"relation_name":"is_a","term_name":"choroid cancer","termid":"MONDO:0006700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"malignant choroid melanoma","secondary_identifiers":["MEDGEN:138064","DOID:6438","UMLS:C0346388","SCTID:255021005","MONDO:0021436","NCIT:C4561"],"synonyms":[{"name":"choroid malignant melanoma","type":"exact"},{"name":"choroid melanoma","type":"exact"},{"name":"choroidal melanoma","type":"exact"},{"name":"malignant melanoma of choroid","type":"exact"},{"name":"malignant melanoma of the choroid","type":"exact"},{"name":"melanoma (disease) of optic choroid","type":"exact"},{"name":"melanoma of choroid","type":"exact"},{"name":"melanoma of the choroid","type":"exact"},{"name":"optic choroid melanoma","type":"exact"},{"name":"optic choroid melanoma (disease)","type":"exact"}],"termid":"MONDO:0003878","xrefs":{"Monarch":{"xref_id":"0003878"}}}


id: MONDO:0011885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disorder comprising tubulointerstitial nephritis and uveitis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"tubulointerstitial nephritis and uveitis syndrome","secondary_identifiers":["GARD:9252","OMIM:607665","MedDRA:10069039","NCIT:C123021","ICD10CM:N10","MedDRA:10069034","MEDGEN:334715","MESH:C536922","Orphanet:91500","UMLS:C1843273"],"synonyms":[{"name":"Dobrin syndrome","type":"exact"},{"name":"TINU","type":"related"},{"name":"TINU syndrome","type":"exact"},{"name":"TUBULOINTERSTITIAL nephritis with uveitis","type":"related"},{"name":"Tubulointerstitial nephritis and uveitis","type":"exact"},{"name":"acute Tubulointerstitial nephritis","type":"related"},{"name":"acute tubulointerstitial nephritis and uveitis syndrome","type":"exact"}],"termid":"MONDO:0011885","xrefs":{"Monarch":{"xref_id":"0011885"}}}


id: PBO:0051431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-12","termid":"PBO:0051431"}


id: GO:0018012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The trimethylation of the N-terminal alanine of proteins to form the derivative peptidyl-N,N,N-trimethyl-L-alanine.","definition_xrefs":["RESID:AA0062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-alanine methylation","termid":"GO:0018011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-alanine trimethylation","termid":"GO:0018012"}


id: GO:1904248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent of age-related resistance.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19694953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"age-related resistance","termid":"GO:0090644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of age-related resistance","synonyms":[{"name":"regulation of ARR","type":"exact"},{"name":"regulation of adult seedling resistance","type":"narrow"},{"name":"regulation of developmental resistance","type":"broad"},{"name":"regulation of flowering-induced resistance","type":"narrow"},{"name":"regulation of mature seedling resistance","type":"narrow"},{"name":"regulation of ontogenic resistance","type":"broad"},{"name":"regulation of senescence-induced resistance","type":"narrow"}],"termid":"GO:1904248"}


id: MONDO:0850080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic unicoronal and sagittal craniosynostosis","secondary_identifiers":["UMLS:C5680396","GARD:22477","Orphanet:620186","MEDGEN:1842804"],"termid":"MONDO:0850080","xrefs":{"Monarch":{"xref_id":"0850080"}}}


id: MONDO:0000415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An electroclinical syndrome with onset in adolescence and adulthood.","definition_xrefs":["DOID:0050705","PMID:20196795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy syndrome","termid":"MONDO:0015650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"adolescence-adult electroclinical syndrome","termid":"MONDO:0000415","xrefs":{"Monarch":{"xref_id":"0000415"}}}


id: FYPO:0005641
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which kinetochores become separated during the first meiotic nuclear division, and in which homologous chromosomes do not move towards the spindle poles at the same time during anaphase, but are eventually separated normally.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:21920317"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging chromosomes during meiosis I","termid":"FYPO:0004393"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"sister kinetochore dissociation in meiotic metaphase I, normal chromosome segregation in meiosis I, and sister chromatid non-disjunction in meiosis II","termid":"FYPO:0005633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation, lagging chromosomes, and normal chromosome separation","synonyms":[{"name":"abnormal chromosome segregation during first meiotic nuclear division with premature sister kinetochore separation, lagging chromosomes, and normal chromosome separation","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with precocious centromeric dissociation, lagging chromosomes, and normal chromosome separation","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation, lagging chromosomes, and normal chromosome segregation","type":"related"},{"name":"abnormal chromosome segregation during meiosis I with split kinetochores, lagging chromosomes, and normal chromosome separation","type":"related"}],"termid":"FYPO:0005641"}


id: GO:0075346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism adds one or more ubiquitin groups to a protein of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host protein by ubiquitination (obsolete GO:0075346)","synonyms":[{"name":"modification by symbiont of host protein by ubiquitinylation","type":"exact"},{"name":"modification by symbiont of host protein by ubiquitylation","type":"exact"}],"termid":"GO:0075346"}


id: PBO:0116701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P) dependent 3-beta-hydroxysteroid dehydrogenase NSDHL","termid":"PBO:0116701"}


id: MONDO:0014522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinal dystrophy and obesity","secondary_identifiers":["MEDGEN:863861","OMIM:616188","UMLS:C4015424"],"synonyms":[{"name":"RDOB","type":"related"},{"name":"retinal dystrophy and obesity","type":"exact"}],"termid":"MONDO:0014522","xrefs":{"Monarch":{"xref_id":"0014522"}}}


id: MONDO:0011297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nocturnal frontal lobe epilepsy that has material basis in variation in the chromosome region 15q24.","definition_xrefs":["PMID:9758605","DOID:0060683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-related hypermotor epilepsy","termid":"MONDO:0000030"},{"relation_name":"is_a","term_name":"autosomal dominant nocturnal frontal lobe epilepsy","termid":"MONDO:0020300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"autosomal dominant nocturnal frontal lobe epilepsy 2","secondary_identifiers":["GARD:15352","MEDGEN:351053","MESH:C566400","UMLS:C1864125","OMIM:603204"],"synonyms":[{"name":"ENFL2","type":"exact"},{"name":"autosomal dominant nocturnal frontal lobe epilepsy type 2","type":"exact"},{"name":"epilepsy, nocturnal frontal lobe, 2","type":"related"},{"name":"epilepsy, nocturnal frontal lobe, type 2","type":"exact"},{"name":"nocturnal frontal lobe epilepsy 2","type":"exact"}],"termid":"MONDO:0011297","xrefs":{"Monarch":{"xref_id":"0011297"}}}


id: PBO:0080735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing E3 ubiquitin protein ligase 1","termid":"PBO:0080735"}


id: PBO:0017963
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nim1 Interacting Factor","termid":"PBO:0017963"}


id: GO:0042110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell activation","synonyms":[{"name":"T lymphocyte activation","type":"exact"},{"name":"T-cell activation","type":"exact"},{"name":"T-lymphocyte activation","type":"exact"}],"termid":"GO:0042110"}


id: PBO:0052878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 8-3, pseudogene","termid":"PBO:0052878"}


id: GO:0005147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an oncostatin-M receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"oncostatin-M receptor binding","synonyms":[{"name":"oncostatin-M","type":"narrow"},{"name":"oncostatin-M receptor ligand","type":"narrow"}],"termid":"GO:0005147"}


id: GO:0005733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nucleolar RNA (obsolete GO:0005733)","synonyms":[{"name":"small nucleolar RNA","type":"exact"},{"name":"snoRNA","type":"exact"}],"termid":"GO:0005733"}


id: MOD:01913
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of an L-tryptophan residue with one chlorine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated tryptophan","termid":"MOD:01068"},{"relation_name":"is_a","term_name":"monochlorinated residue","termid":"MOD:01911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monochlorinated L-tryptophan","synonyms":[{"name":"Cl1Trp","type":"exact"}],"termid":"MOD:01913"}


id: GO:0034356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD) from the nicotinamide riboside (NR).","definition_xrefs":["PMID:17482543"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD biosynthesis via nicotinamide riboside salvage pathway (obsolete GO:0034356)","secondary_identifiers":["MetaCyc:PWY3O-4106","Reactome:R-HSA-197264"],"synonyms":[{"name":"NR salvage pathway","type":"exact"},{"name":"nicotinamide riboside salvage pathway","type":"exact"}],"termid":"GO:0034356"}


id: PBO:0088231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase","termid":"PBO:0088231"}


id: MONDO:0008012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monophalangy of great toe","secondary_identifiers":["MESH:C563570","MEDGEN:320429","OMIM:158100","UMLS:C1834753"],"synonyms":[{"name":"Monophalangy of great toe","type":"exact"}],"termid":"MONDO:0008012","xrefs":{"Monarch":{"xref_id":"0008012"}}}


id: GO:0018328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-histidine to form 3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine).","definition_xrefs":["RESID:AA0036"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via 3'-phospho-L-histidine (obsolete GO:0018328)","termid":"GO:0018328"}


id: MONDO:0029137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 74","secondary_identifiers":["DOID:0112165","OMIM:618140","MEDGEN:1648467","UMLS:C4748334","GARD:18151"],"synonyms":[{"name":"DFNA74","type":"narrow"},{"name":"deafness, autosomal dominant 74","type":"narrow"}],"termid":"MONDO:0029137","xrefs":{"Monarch":{"xref_id":"0029137"}}}


id: GO:0032652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-1 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-1 production","termid":"GO:0032612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-1 production","secondary_identifiers":["GO:0050704","GO:0045360"],"synonyms":[{"name":"regulation of IL-1 production","type":"exact"},{"name":"regulation of interleukin-1 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-1 secretion","type":"narrow"}],"termid":"GO:0032652"}


id: PBO:0038582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and BTB domain containing 2","termid":"PBO:0038582"}


id: GO:0061730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to C-rich, single-stranded, telomere-associated DNA.","definition_xrefs":["PMID:18329362","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded telomeric DNA binding","termid":"GO:0043047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"C-rich strand telomeric DNA binding","termid":"GO:0061730"}


id: PBO:0082240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of chaperonin-containing T-complex; complex mediates protein folding in the cytosol; involved in actin cytoskeleton maintenance; overexpression in neurons suppresses formation of pathogenic conformations of huntingtin protein","termid":"PBO:0082240"}


id: PBO:0060941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor, erythroid 2 like 3 pseudogene 1","termid":"PBO:0060941"}


id: PBO:0004825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C (predicted)","termid":"PBO:0004825"}


id: PBO:0046613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group MER34 member 1, envelope","termid":"PBO:0046613"}


id: PBO:0044073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage stimulation factor subunit 1","termid":"PBO:0044073"}


id: GO:0031341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell killing, the process in which a cell brings about the death of another cell, either in the same or a different organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell killing","termid":"GO:0001906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell killing","termid":"GO:0031341"}


id: GO:0098845
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An endosomal compartment that is part of the post-synapse. Only early and recycling endosomes are typically present in the postsynapse.","definition_xrefs":["PMID:20820847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737","GO:0005768"],"is_obsolete":false,"name":"postsynaptic endosome","termid":"GO:0098845"}


id: PBO:0003579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm10/Mdm12/Mmm1 complex subunit Mmm1 (predicted)","termid":"PBO:0003579"}


id: PBO:0061869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one cut homeobox 1","termid":"PBO:0061869"}


id: MONDO:0016501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hermansky-Pudlak syndrome with pulmonary fibrosis as a complication includes two types (HPS-1 and HPS-4) of Hermansky-Pudlak syndrome (HPS), a multi-system disorder characterized by oculocutaneous albinism, bleeding diathesis and, in some cases, pulmonary fibrosis or granulomatous colitis.","definition_xrefs":["Orphanet:231500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to childhood","termid":"MONDO:0017014"},{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome","termid":"MONDO:0019312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0005570"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome with pulmonary fibrosis","secondary_identifiers":["ICD10CM:E70.3","UMLS:C5679834","icd11.foundation:1086187623","MEDGEN:1843223","GARD:17168"],"synonyms":[{"name":"HPS with pulmonary fibrosis","type":"exact"}],"termid":"MONDO:0016501","xrefs":{"Monarch":{"xref_id":"0016501"}}}


id: MONDO:0005182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm characterized by the presence of cystic structures lined by serous epithelial cells in a fibrotic stroma. Most commonly the primary site is the ovary, but serous cystadenofibromas can occur in the pancreas as well.","definition_xrefs":["PMID:16025006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroma","termid":"MONDO:0005167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serous cystadenofibroma","secondary_identifiers":["EFO:0002510","NCIT:C40032"],"termid":"MONDO:0005182","xrefs":{"Monarch":{"xref_id":"0005182"}}}


id: MONDO:0005991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intermittent fever characterized by intervals of chills, fever, and splenomegaly each of which may last as long as 40 hours. It is caused by bartonella quintana and transmitted by the human louse.","definition_xrefs":["MESH:D014205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bartonellosis","termid":"MONDO:0005664"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trench fever","secondary_identifiers":["UMLS:C0040830","MEDGEN:21637","MedDRA:10044582","ICD10CM:A79.0","GARD:18862","icd11.foundation:1587737629","DOID:11101","ICD9:083.1","SCTID:82214002","EFO:0007519","Orphanet:64694"],"synonyms":[{"name":"Bartonella quintana caused disease or disorder","type":"exact"},{"name":"Bartonella quintana disease or disorder","type":"exact"},{"name":"Bartonella quintana infectious disease","type":"exact"},{"name":"His-Werner disease","type":"exact"},{"name":"Wolhynian fever","type":"exact"},{"name":"bartonellosis due to Bartonella quintana infection","type":"exact"},{"name":"fever, trench","type":"related"},{"name":"fevers, trench","type":"related"},{"name":"quintan fever","type":"exact"},{"name":"shin bone fever","type":"exact"},{"name":"tibialgic fever","type":"exact"},{"name":"trench fever","type":"exact"},{"name":"trench fevers","type":"related"}],"termid":"MONDO:0005991","xrefs":{"Monarch":{"xref_id":"0005991"}}}


id: GO:0061052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle hypertrophy","termid":"GO:0010614"},{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell differentiation","termid":"GO:0051154"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle tissue growth","termid":"GO:0055022"},{"relation_name":"is_a","term_name":"regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061050"},{"relation_name":"negatively_regulates","term_name":"cell growth involved in cardiac muscle cell development","termid":"GO:0061049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061052"}


id: PBO:0039770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AQP4 antisense RNA 1","termid":"PBO:0039770"}


id: GO:0051788
data:
  {"annotated_genes":["SJAG_00219","SJAG_04612","SJAG_00270","SJAG_03815","SJAG_02419","SJAG_00054","SJAG_01737","SJAG_01556","SJAG_03657","SJAG_00173","SJAG_05022","SJAG_00552","SJAG_02341","SJAG_04567","SJAG_03345","SJAG_01160","SJAG_04187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110313,104521,112596,71225,88417,110312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071218"},{"annotations":[113927,109946,110049,108313,110642],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071629"},{"annotations":[103722,88136,89602,113290],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180027"},{"annotations":[76898,111166],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071630"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a misfolded protein stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to topologically incorrect protein","termid":"GO:0035966"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00173":null,"SJAG_00219":null,"SJAG_00270":null,"SJAG_00552":null,"SJAG_01160":null,"SJAG_01556":null,"SJAG_01737":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_03815":null,"SJAG_04187":null,"SJAG_04567":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to misfolded protein","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0051788","terms_by_termid":{"GO:0071218":null,"GO:0071629":null,"GO:0071630":null,"GO:0180027":null}}


id: GO:1902568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eosinophil activation.","definition_xrefs":["GOC:TermGenie","PMID:16254138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of eosinophil activation","termid":"GO:1902566"},{"relation_name":"positively_regulates","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eosinophil activation","synonyms":[{"name":"activation of eosinophil activation","type":"narrow"},{"name":"up regulation of eosinophil activation","type":"exact"},{"name":"up-regulation of eosinophil activation","type":"exact"},{"name":"upregulation of eosinophil activation","type":"exact"}],"termid":"GO:1902568"}


id: PBO:0057468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 586","termid":"PBO:0057468"}


id: GO:0017117
data:
  {"annotated_genes":["SJAG_03219","SJAG_02822"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109386,110631],"is_not":false,"summary":null,"term":"GO:0017117"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses single-stranded DNA-dependent DNA helicase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02822":null,"SJAG_03219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"single-stranded DNA-dependent ATP-dependent DNA helicase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ssDNA-dependent ATP-dependent DNA helicase complex","type":"exact"}],"termid":"GO:0017117","terms_by_termid":{"GO:0017117":null}}


id: GO:0090235
data:
  {"annotated_genes":["SJAG_01805","SJAG_00082","SJAG_04280","SJAG_03126","SJAG_05290","SJAG_01837","SJAG_03048","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[112269,116311,105500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[111510,102696,116979,90342,94147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of metaphase plate congression, the alignment of chromosomes at the metaphase plate, a plane halfway between the poles of the spindle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"metaphase chromosome alignment","termid":"GO:0051310"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metaphase plate congression","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromosome congression","type":"exact"}],"termid":"GO:0090235","terms_by_termid":{"GO:0140429":null,"GO:1902424":null,"GO:1902425":null}}


id: PBO:0057371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548am","termid":"PBO:0057371"}


id: PBO:0047496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog A pseudogene 4","termid":"PBO:0047496"}


id: MONDO:0012063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulnar/fibula ray defect - brachydactyly syndrome is a very rare malformation syndrome characterized by ulnar hypoplasia associated with hypoplastic to absent fourth and/or fifth digits, fibular hypoplasia, short stature and facial dysmorphism.","definition_xrefs":["Orphanet:52056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulnar/fibula ray defect-brachydactyly syndrome","secondary_identifiers":["MEDGEN:324890","MESH:C563905","OMIM:608571","SCTID:719843001","GARD:16654","UMLS:C1837830"],"synonyms":[{"name":"Morava-Mehes syndrome","type":"exact"},{"name":"ulnar/fibular RAY defect and brachydactyly","type":"related"}],"termid":"MONDO:0012063","xrefs":{"Monarch":{"xref_id":"0012063"}}}


id: MONDO:0018980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrofacial dysostosis, Kennedy-Teebi type was reported as a new type of acrofacial dysostosis due to the presence of manifestations not usually seen in Nager syndrome (NS) such as microcephaly, blepharophimosis, microtia, a peculiar beakednose, cleft lip and palate, symmetrical involvement of the thumbs and great toes and developmental delay. It has since been suggested that these features can also be a part of the NS phenotype.","definition_xrefs":["Orphanet:64542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrofacial dysostosis, Kennedy-Teebi type","secondary_identifiers":["GARD:18859","MEDGEN:929763","UMLS:C4304094","SCTID:720427009"],"synonyms":[{"name":"Kennedy-Teebi syndrome","type":"exact"}],"termid":"MONDO:0018980","xrefs":{"Monarch":{"xref_id":"0018980"}}}


id: MONDO:0957196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A histone mutated tumor that is characterized by the presence of histone H3 K27M mutation located throughout the midline structures of the central nervous system.","definition_xrefs":["DOID:0080684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse intrinsic pontine glioma","termid":"MONDO:0006033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"diffuse midline glioma, H3 K27M-mutant","secondary_identifiers":["UMLS:C4289688","MEDGEN:927220","NCIT:C129309"],"termid":"MONDO:0957196","xrefs":{"Monarch":{"xref_id":"0957196"}}}


id: PBO:0032727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_following_normal_mitotic_chromosome_condensation","termid":"PBO:0032727"}


id: PBO:0047992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member I, pseudogene","termid":"PBO:0047992"}


id: MONDO:0956990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A suptratentorial ependymoma that is characterized by the presence of a fusion gene involving ZFTA gene.","definition_xrefs":["DOID:0081252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supratentorial ependymoma","termid":"MONDO:0850340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"supratentorial ependymoma, ZFTA fusion–positive","secondary_identifiers":["NCIT:C186350"],"termid":"MONDO:0956990","xrefs":{"Monarch":{"xref_id":"0956990"}}}


id: FYPO:0008205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during hypoxic stress.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to nucleus during hypoxia","termid":"FYPO:0008205"}


id: MONDO:0957815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay with or without epilepsy","secondary_identifiers":["MEDGEN:1848555","OMIM:620540","UMLS:C5882702"],"termid":"MONDO:0957815","xrefs":{"Monarch":{"xref_id":"0957815"}}}


id: PBO:0077441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 176A","termid":"PBO:0077441"}


id: PBO:0011617
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_session","termid":"PBO:0011617"}


id: GO:0009658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chloroplast organization","synonyms":[{"name":"chloroplast organisation","type":"exact"},{"name":"chloroplast organization and biogenesis","type":"related"}],"termid":"GO:0009658"}


id: PBO:0081704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 625","termid":"PBO:0081704"}


id: GO:0009985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroflavonol(thiole) lyase activity (obsolete GO:0009985)","synonyms":[{"name":"dihydroflavonol(thiole) lyase activity","type":"exact"}],"termid":"GO:0009985"}


id: PBO:0054702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2111","termid":"PBO:0054702"}


id: MONDO:0033372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 63","secondary_identifiers":["OMIM:617976","UMLS:C4693810","DOID:0080426","MEDGEN:1646846"],"synonyms":[{"name":"DEE63","type":"exact"},{"name":"EIEE63","type":"exact"},{"name":"developmental and epileptic encephalopathy 63","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 63","type":"exact"}],"termid":"MONDO:0033372","xrefs":{"Monarch":{"xref_id":"0033372"}}}


id: GO:0070918
data:
  {"annotated_genes":["SJAG_03356","SJAG_02817","SJAG_02725","SJAG_02621","SJAG_01836","SJAG_03689","SJAG_04942","SJAG_01176","SJAG_02622","SJAG_01867"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88717,118395,118283,71528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990431"},{"annotations":[93170,118421,92205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043628"},{"annotations":[118398,71529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990432"},{"annotations":[72285,72034,116288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030422"}]},"cv_name":"biological_process","definition":"A process leading to the generation of a functional regulatory non-coding RNA.","definition_xrefs":["PMID:19239886","GOC:mah","PMID:15196465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"part_of","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_01836":null,"SJAG_01867":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02725":null,"SJAG_02817":null,"SJAG_03356":null,"SJAG_03689":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulatory ncRNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0031051"],"synonyms":[{"name":"gene silencing by RNA, production of guide RNA","type":"narrow"},{"name":"gene silencing by RNA, production of small RNA","type":"narrow"},{"name":"primary sncRNA processing","type":"narrow"},{"name":"production of small RNA involved in gene silencing by RNA","type":"narrow"},{"name":"small regulatory ncRNA maturation","type":"narrow"},{"name":"small regulatory ncRNA processing","type":"narrow"},{"name":"sncRNA processing","type":"narrow"},{"name":"sncRNA production","type":"narrow"}],"termid":"GO:0070918","terms_by_termid":{"GO:0030422":null,"GO:0043628":null,"GO:1990431":null,"GO:1990432":null}}


id: GO:0050970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that contribute to magnetoception in which an electrical stimulus is received and converted into a molecular signal. The stimulus is in the form of an induced electric field resulting from movement in a magnetic field.","definition_xrefs":["GOC:dos","GOC:dph","GOC:ai","GOC:tb","PMID:15886990","Wikipedia:Magnetoception"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of electrical stimulus involved in sensory perception","termid":"GO:0050963"},{"relation_name":"part_of","term_name":"magnetoreception by sensory perception of electrical stimulus","termid":"GO:0050978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in magnetoreception","synonyms":[{"name":"detection of electrical stimulus during magnetoreception","type":"related"},{"name":"magnetoception, sensory transduction of electrical stimulus","type":"exact"},{"name":"magnetoreception, detection of electrical stimulus","type":"exact"},{"name":"magnetoreception, sensory detection of electrical stimulus","type":"exact"},{"name":"magnetoreception, sensory transduction of electrical stimulus","type":"exact"},{"name":"sensory detection of electrical stimulus during magnetoreception","type":"related"},{"name":"sensory transduction of electrical stimulus during magnetoreception","type":"related"}],"termid":"GO:0050970"}


id: PBO:0038708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 2","termid":"PBO:0038708"}


id: GO:0001113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the melting of the DNA hybrid of the core promoter region within the transcriptional closed complex of an RNA polymerase II preinitiation complex (PIC) to produce an open complex where the DNA duplex around the transcription initiation site is unwound to form the transcription bubble.","definition_xrefs":["GOC:txnOH","PMID:15020047","PMID:18280161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription open complex formation","termid":"GO:0001112"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"transcription open complex formation at RNA polymerase II promoter","synonyms":[{"name":"RNA polymerase II promoter melting","type":"exact"},{"name":"transcriptional open complex formation at RNA polymerase II promoter","type":"exact"}],"termid":"GO:0001113"}


id: PBO:0052128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily F member 1","termid":"PBO:0052128"}


id: GO:2000786
data:
  {"annotated_genes":["SJAG_05289","SJAG_03851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108875,108965],"is_not":false,"summary":null,"term":"GO:2000786"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of autophagic vacuole assembly.","definition_xrefs":["GOC:BHF","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"positive regulation of vacuole organization","termid":"GO:0044090"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"regulation of autophagosome assembly","termid":"GO:2000785"},{"relation_name":"positively_regulates","term_name":"autophagosome assembly","termid":"GO:0000045"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03851":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0006914"],"is_obsolete":false,"name":"positive regulation of autophagosome assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of PAS formation","type":"related"},{"name":"positive regulation of autophagic vacuole assembly","type":"exact"},{"name":"positive regulation of autophagic vacuole formation","type":"related"},{"name":"positive regulation of autophagosome biosynthesis","type":"exact"},{"name":"positive regulation of autophagosome formation","type":"exact"}],"termid":"GO:2000786","terms_by_termid":{"GO:2000786":null}}


id: PBO:0111438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar proton/calcium exchanger Vcx1","termid":"PBO:0111438"}


id: PBO:0049912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEXD intronic transcript 1","termid":"PBO:0049912"}


id: GO:0033100
data:
  {"annotated_genes":["SJAG_00411","SJAG_02629","SJAG_01009","SJAG_02165","SJAG_00545"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94292,105630,106828,108229],"is_not":false,"summary":null,"term":"GO:0033100"},{"annotations":[78149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990467"}]},"cv_name":"cellular_component","definition":"A Gcn5-independent multisubunit complex that catalyzes the acetylation of histone H3. The budding yeast complex includes Sas3p, Taf30p, and Yng1p.","definition_xrefs":["PMID:10817755","PMID:17157260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00411":null,"SJAG_00545":null,"SJAG_01009":null,"SJAG_02165":null,"SJAG_02629":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NuA3 histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033100","terms_by_termid":{"GO:0033100":null,"GO:1990467":null}}


id: GO:0044682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + H2O = 7,8-dihydroneopterin 2',3'-cyclic phosphate + diphosphate + formate + H+. This activity is part of the biosynthesis of methanopterin in Archaea, and requires Fe2+.","definition_xrefs":["PMID:17497938","RHEA:25860","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP cyclohydrolase activity","termid":"GO:0003933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"GTP cyclohydrolase IV activity","secondary_identifiers":["EC:3.5.4.39"],"synonyms":[{"name":"Fe(2+)-dependent archaeal-specific GTP cyclohydrolase activity","type":"exact"},{"name":"MptA activity","type":"narrow"},{"name":"archaeal-specific GTP cyclohydrolase activity","type":"exact"}],"termid":"GO:0044682"}


id: GO:0102836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-16:1-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-16:1-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:7948918"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-16:1-monogalactosyldiacylglyceroldesaturase activity (obsolete GO:0102836)","termid":"GO:0102836"}


id: PBO:0091033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd2","termid":"PBO:0091033"}


id: MONDO:0013574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutis laxa - Marfanoid syndrome","secondary_identifiers":["MESH:C563639","MEDGEN:96594","SCTID:254221009","icd11.foundation:467492754","UMLS:C0432335","OMIM:614100","Orphanet:171719","GARD:17069"],"synonyms":[{"name":"cutis laxa - Marfanoid syndrome","type":"exact"},{"name":"cutis laxa, neonatal, with MARFANOID phenotype","type":"related"}],"termid":"MONDO:0013574","xrefs":{"Monarch":{"xref_id":"0013574"}}}


id: FYPO:0000312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a normal germ tube, and undergoes septation, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with normal germ tube morphology","termid":"FYPO:0000310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination with normal, septated germ tube morphology","synonyms":[{"name":"inviable following spore germination with normal, septated germ tube morphology","type":"exact"},{"name":"inviable germinated spore with normal, septated germ tube morphology","type":"exact"},{"name":"lethal after spore germination with normal, septated germ tube morphology","type":"exact"}],"termid":"FYPO:0000312"}


id: PBO:0040115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 2","termid":"PBO:0040115"}


id: PBO:0038939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADH5 pseudogene 3","termid":"PBO:0038939"}


id: FYPO:0004556
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylcholine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phosphatidylcholine level","synonyms":[{"name":"decreased cellular PC level","type":"exact"},{"name":"decreased cellular phosphatidylcholine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylcholine level during vegetative growth","type":"exact"},{"name":"decreased phosphatidylcholine accumulation","type":"related"},{"name":"reduced cellular phosphatidylcholine level","type":"exact"}],"termid":"FYPO:0004556"}


id: MONDO:0012872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombophilia","termid":"MONDO:0100240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombophilia, familial, due to decreased release of tissue plasminogen activator","secondary_identifiers":["MESH:C567341","OMIM:612348","UMLS:C2676721","MEDGEN:393574","DOID:0111906"],"synonyms":[{"name":"THPH9","type":"exact"},{"name":"hyperfibrinolysis, familial, due to increased release of plat","type":"exact"},{"name":"hyperfibrinolysis, familial, due to increased release of tissue plasminogen activator","type":"related"},{"name":"thrombophilia, familial, due to decreased release of PLAT","type":"exact"},{"name":"thrombophilia, familial, due to decreased release of tissue plasminogen activator","type":"exact"}],"termid":"MONDO:0012872","xrefs":{"Monarch":{"xref_id":"0012872"}}}


id: GO:0016896
data:
  {"annotated_genes":["SJAG_01836","SJAG_01798","SJAG_04519","SJAG_04006","SJAG_02993","SJAG_00401","SJAG_03876","SJAG_02275","SJAG_04407","SJAG_03276","SJAG_00966","SJAG_04369","SJAG_00841","SJAG_04084","SJAG_03132","SJAG_01822","SJAG_04587","SJAG_04824","SJAG_00081","SJAG_03745","SJAG_04153","SJAG_06586","SJAG_04818","SJAG_02540"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63127,103987,102406,104725,99267,66768,90322,79861,105590,118611,70306,71233,74942,80018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[70339,73966,78165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[114736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[116906,108093,77704,74654,79303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[68756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within ribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 5' phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exonuclease activity","termid":"GO:0004532"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00401":null,"SJAG_00841":null,"SJAG_00966":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01836":null,"SJAG_02275":null,"SJAG_02540":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03276":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04519":null,"SJAG_04587":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0004527","GO:0003674","GO:0003824","GO:0140098","GO:0016787"],"is_obsolete":false,"name":"RNA exonuclease activity, producing 5'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.13.-","Reactome:R-HSA-429860"],"synonyms":[{"name":"exoribonuclease activity, producing 5' phosphomonoesters","type":"exact"},{"name":"exoribonuclease activity, producing 5'-phosphomonoesters","type":"exact"}],"termid":"GO:0016896","terms_by_termid":{"GO:0000175":null,"GO:0004534":null,"GO:0004535":null,"GO:0008859":null,"GO:1990838":null}}


id: MONDO:0002365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangiopericytoma arising from the kidney.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney hemangiopericytoma","secondary_identifiers":["MEDGEN:1847044","SCTID:254923001","NCIT:C4527","UMLS:C5848097","DOID:262"],"synonyms":[{"name":"hemangiopericytoma of kidney","type":"exact"},{"name":"hemangiopericytoma of the kidney","type":"exact"},{"name":"kidney hemangiopericytoma","type":"exact"},{"name":"kidney spindle cell tumor","type":"exact"},{"name":"kidney spindle cell tumour","type":"exact"},{"name":"renal hemangiopericytoma","type":"exact"}],"termid":"MONDO:0002365","xrefs":{"Monarch":{"xref_id":"0002365"}}}


id: MONDO:0002162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare malignant neoplasm that arises from the fallopian tube and is characterized by the presence of a benign epithelial component and a sarcomatous component.","definition_xrefs":["NCIT:C40125"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"fallopian tube carcinosarcoma","termid":"MONDO:0006207"},{"relation_name":"is_a","term_name":"fallopian tube cancer","termid":"MONDO:0002158"},{"relation_name":"is_a","term_name":"adenosarcoma","termid":"MONDO:0005636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fallopian tube adenosarcoma","secondary_identifiers":["UMLS:C1517121","DOID:1973","MEDGEN:275872"],"synonyms":[{"name":"adenosarcoma of fallopian tube","type":"exact"},{"name":"fallopian tube Mullerian adenosarcoma","type":"exact"},{"name":"fallopian tube Müllerian adenosarcoma","type":"exact"},{"name":"fallopian tube adenosarcoma","type":"exact"},{"name":"fallopian tube mullerian adenosarcoma","type":"exact"}],"termid":"MONDO:0002162","xrefs":{"Monarch":{"xref_id":"0002162"}}}


id: MONDO:0031632
data:
  {"annotated_genes":["SJAG_01058","SJAG_04085"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800438"},{"annotations":[86116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100217"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01058":null,"SJAG_04085":null},"genotype_count":0,"is_obsolete":false,"name":"developmental delay with short stature, dysmorphic facial features, and sparse hair","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310801","DOID:0070476","MEDGEN:934768","OMIMPS:616901"],"termid":"MONDO:0031632","terms_by_termid":{"MONDO:0100217":null,"MONDO:0800438":null},"xrefs":{"Monarch":{"xref_id":"0031632"}}}


id: GO:0080044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group from UDP-glucose to the 7-hydroxy group of a quercetin molecule.","definition_xrefs":["PMID:15352060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"quercetin 7-O-glucosyltransferase activity","termid":"GO:0080044"}


id: GO:0061988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chromosome organization process in which meiotic chromosomes in the germ cell nucleus cluster together to form a compact spherical structure called the karyosome.","definition_xrefs":["PMID:19696886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"part_of","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"karyosome formation","termid":"GO:0061988"}


id: PBO:0041568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 144","termid":"PBO:0041568"}


id: GO:0018464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxypimelyl-CoA + NAD+ = 3-oxopimelyl-CoA + H+ + NADH.","definition_xrefs":["EC:1.1.1.259","RHEA:11168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-hydroxypimeloyl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.259-RXN","KEGG_REACTION:R05305","UM-BBD_reactionID:r0196"],"synonyms":[{"name":"3-hydroxypimeloyl-CoA:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018464"}


id: PBO:0084930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein of the PUF family; binds to specific mRNAs, often in the 3' UTR; has broad specificity and binds to more than 1000 mRNAs (16% of the transcriptome); recruits the CCR4-NOT deadenylase complex to mRNAs along with Dhh1p and Dcp1p to promote deadenylation, decapping, and decay; also interacts with the Caf20p translational initiation repressor, affecting its mRNA target specificity","termid":"PBO:0084930"}


id: GO:0060460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the left lung are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung morphogenesis","termid":"GO:0060425"},{"relation_name":"part_of","term_name":"left lung development","termid":"GO:0060459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left lung morphogenesis","termid":"GO:0060460"}


id: PBO:0076861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 11","termid":"PBO:0076861"}


id: GO:1901742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-deoxystreptamine.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2-deoxystreptamine metabolic process","synonyms":[{"name":"2-deoxystreptamine metabolism","type":"exact"}],"termid":"GO:1901742"}


id: GO:0046571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-keto-4-methylthiobutyrate + aspartate = methionine + oxaloacetate.","definition_xrefs":["MetaCyc:R15-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartate-2-keto-4-methylthiobutyrate transaminase activity (obsolete GO:0046571)","termid":"GO:0046571"}


id: MONDO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A speech disorder characterized by frequent sound or syllable repetitions, sound prolongations, or other dysfluencies that are inappropriate for the individual's age.","definition_xrefs":["NCIT:C35043"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"articulation disorder","termid":"MONDO:0002903"},{"relation_name":"is_a","term_name":"speech disorder","termid":"MONDO:0004730"},{"relation_name":"is_a","term_name":"language disorder","termid":"MONDO:0004750"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stutter disorder","secondary_identifiers":["UMLS:C0038131","DOID:0060243","MEDGEN:20932","OMIMPS:184450"],"synonyms":[{"name":"familial persistent stuttering","type":"narrow"},{"name":"stammering","type":"exact"},{"name":"stutter","type":"exact"},{"name":"stuttering","type":"exact"},{"name":"stuttering, familial persistent","type":"narrow"}],"termid":"MONDO:0000723","xrefs":{"Monarch":{"xref_id":"0000723"}}}


id: FYPO:0005683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through prophase of mitosis is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of mitotic prophase","synonyms":[{"name":"delayed mitotic prophase progression","type":"related"},{"name":"increased duration of mitotic prophase during vegetative growth","type":"exact"},{"name":"increased duration of mitotic prophase progression","type":"exact"},{"name":"increased duration of prophase during mitotic cell cycle","type":"exact"},{"name":"prolonged mitotic prophase","type":"exact"}],"termid":"FYPO:0005683"}


id: PBO:0015233
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer","termid":"PBO:0015233"}


id: PBO:0108909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1191 pseudogene 3","termid":"PBO:0108909"}


id: PBO:0088522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd4","termid":"PBO:0088522"}


id: PBO:0077810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 binding protein 1","termid":"PBO:0077810"}


id: PBO:0088962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein, BUD22 family","termid":"PBO:0088962"}


id: MONDO:0957788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 18a, autosomal dominant","secondary_identifiers":["UMLS:C5882694","OMIM:620512","MEDGEN:1844217"],"termid":"MONDO:0957788","xrefs":{"Monarch":{"xref_id":"0957788"}}}


id: GO:0017145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types.","definition_xrefs":["GOC:jid","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell division","synonyms":[{"name":"stem cell renewal","type":"exact"}],"termid":"GO:0017145"}


id: GO:0102422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: curcumin 4'-O-beta-D-gentiotrioside + UDP-alpha-D-glucose = curcumin 4'-O-beta-D-gentiotetraside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete curcumin-4'-O-beta-D-gentiotrioside 1,6-glucosyltransferase activity (obsolete GO:0102422)","termid":"GO:0102422"}


id: PBO:0060028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 16","termid":"PBO:0060028"}


id: GO:0042276
data:
  {"annotated_genes":["SJAG_04190","SJAG_16460","SJAG_00611","SJAG_02667","SJAG_00573","SJAG_03906","SJAG_00153","SJAG_04089","SJAG_04791"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70784,73621,75416,78060,78329,96209,103192,104538],"is_not":false,"summary":null,"term":"GO:0042276"},{"annotations":[112068],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904332"}]},"cv_name":"biological_process","definition":"The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across the lesion. This process does not remove the replication-blocking lesions and causes an increase in the endogenous mutation level. For example, in E. coli, a low fidelity DNA polymerase, pol V, copies lesions that block replication fork progress. This produces mutations specifically targeted to DNA template damage sites, but it can also produce mutations at undamaged sites.","definition_xrefs":["GOC:elh","PMID:11485998","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translesion synthesis","termid":"GO:0019985"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00573":null,"SJAG_00611":null,"SJAG_02667":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"error-prone translesion synthesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5655862","Reactome:R-HSA-110312","Reactome:R-HSA-5656121"],"synonyms":[{"name":"error-prone postreplication DNA repair","type":"related"},{"name":"mutagenic PRR","type":"exact"},{"name":"mutagenic postreplication DNA repair","type":"related"}],"termid":"GO:0042276","terms_by_termid":{"GO:0042276":null,"GO:1904332":null}}


id: PBO:0087401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes; light sensing pathway component that accumulates in the nucleus in response to blue light; relative distribution to nucleus increases upon DNA replication stress","termid":"PBO:0087401"}


id: PBO:0065676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type V, pseudogene","termid":"PBO:0065676"}


id: PR:Q9USQ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sim3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USQ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NASP-related protein sim3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.15c","synonyms":[{"name":"CENP-A escort protein sim3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sim3","type":"exact"},{"name":"silencing in the middle of the centromere protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USQ4"}


id: PBO:0047864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(p16.2)","termid":"PBO:0047864"}


id: PBO:0036081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K36_methylation_during_vegetative_growth","termid":"PBO:0036081"}


id: GO:0031420
data:
  {"annotated_genes":["SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030955"}]},"cv_name":"molecular_function","definition":"Binding to an alkali metal ion; alkali metals are those elements in group Ia of the periodic table, with the exception of hydrogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion binding","termid":"GO:0046872"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0046872"],"is_obsolete":false,"name":"alkali metal ion binding","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0031420","terms_by_termid":{"GO:0030955":null}}


id: GO:0061887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The production of new individuals that contain some portion of genetic material inherited from one or more parent organisms, occurring within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:23460907","PMID:25713147"],"gene_count":0,"genotype_count":0,"name":"obsolete reproduction of symbiont in host (obsolete GO:0061887)","termid":"GO:0061887"}


id: GO:0055074
data:
  {"annotated_genes":["SJAG_04167","SJAG_04698","SJAG_04892","SJAG_04757","SJAG_03879","SJAG_03850","SJAG_02532","SJAG_01400","SJAG_02019","SJAG_04028","SJAG_01435","SJAG_03631","SJAG_00916","SJAG_04096","SJAG_03866","SJAG_02240","SJAG_03793"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[80611,113668,73924,118874,70532,71846,71428,80329,73918,78708,100237,109109,98433,75550,72694,73793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of calcium ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:ceb","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00916":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_02019":null,"SJAG_02240":null,"SJAG_02532":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_03879":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04167":null,"SJAG_04698":null,"SJAG_04757":null,"SJAG_04892":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"calcium ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of calcium ion concentration","type":"exact"}],"termid":"GO:0055074","terms_by_termid":{"GO:0006874":null,"GO:0032468":null}}


id: PR:Q9HDX1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mca1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDX1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein PB1A11.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A11.04c","synonyms":[{"name":"Spom972h-mca1","type":"exact"}],"termid":"PR:Q9HDX1"}


id: FYPO:0005595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a ceramide measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular ceramide level","synonyms":[{"name":"normal cellular ceramide accumulation","type":"related"},{"name":"normal cellular ceramide level during mitotic cell cycle","type":"related"},{"name":"normal cellular ceramide level during vegetative growth","type":"exact"}],"termid":"FYPO:0005595"}


id: MONDO:0014098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial partial lipodystrophy","termid":"MONDO:0020088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"CIDEC-related familial partial lipodystrophy","secondary_identifiers":["UMLS:C3808940","DOID:0070203","Orphanet:435651","GARD:13125","MEDGEN:815270","OMIM:615238"],"synonyms":[{"name":"CIDEC-related FPLD","type":"exact"},{"name":"CIDEC-related familial partial lipodystrophy","type":"exact"},{"name":"FPLD5","type":"exact"},{"name":"lipodystrophy, familial partial, associated with Cidec mutations","type":"related"},{"name":"lipodystrophy, familial partial, type 5","type":"related"}],"termid":"MONDO:0014098","xrefs":{"Monarch":{"xref_id":"0014098"}}}


id: PBO:0065226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 7, synaptic","termid":"PBO:0065226"}


id: MONDO:0044619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Propylthiouracil embryofetopathy is a rare teratologic disease characterized by variable congenital anomalies resulting from maternal treatment and prenatal exposure to propylthiouracil. Anomalies frequently encountered include ear malformations (e.g. accessory auricle, preauricular sinus/fistula/cyst), urinary system malformations (e.g. isolated unilateral kidney, congenital hydronephrosis), gastrointestinal anomalies (e.g. congenital bands with intestinal malrotation) and cardiac defects (e.g. situs inversus dextrocardia, cardiac outflow tract defects).","definition_xrefs":["Orphanet:485358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propylthiouracil embryofetopathy","secondary_identifiers":["MEDGEN:1798942","UMLS:C5567519"],"synonyms":[{"name":"PTU embryofetopathy","type":"exact"},{"name":"PTU embryopathy","type":"exact"},{"name":"propylthiouracil embryopathy","type":"exact"}],"termid":"MONDO:0044619","xrefs":{"Monarch":{"xref_id":"0044619"}}}


id: MONDO:0011587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 15q21-q22.","definition_xrefs":["DOID:0110254","PMID:11133359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset sutural cataract","termid":"MONDO:0020372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 25","secondary_identifiers":["OMIM:605728","UMLS:C1854021","MESH:C565301","GARD:18232","MEDGEN:340116"],"synonyms":[{"name":"CCSSO","type":"exact"},{"name":"CTRCT25","type":"exact"},{"name":"cataract 25","type":"exact"},{"name":"cataract type 25","type":"exact"},{"name":"cataract, central pouch-like, with sutural opacities","type":"related"},{"name":"cataract, central saccular, with sutural opacities","type":"related"},{"name":"central pouch-like cataract with sutural opacities","type":"exact"},{"name":"central saccular cataract with sutural opacities","type":"exact"}],"termid":"MONDO:0011587","xrefs":{"Monarch":{"xref_id":"0011587"}}}


id: MONDO:0007274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carpal displacement","secondary_identifiers":["MEDGEN:348468","OMIM:115400","UMLS:C1861847"],"synonyms":[{"name":"carpal bossing","type":"related"},{"name":"carpal displacement","type":"exact"}],"termid":"MONDO:0007274","xrefs":{"Monarch":{"xref_id":"0007274"}}}


id: FYPO:0002246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of glucose binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal monosaccharide binding","termid":"FYPO:0002245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased glucose binding","termid":"FYPO:0002246"}


id: GO:0061980
data:
  {"annotated_genes":["SJAG_02621","SJAG_04061","SJAG_03042"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89121,112521,118405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035197"}]},"cv_name":"molecular_function","definition":"Binding to a small regulatory RNA, a short RNA (usually 50-200 nt long) that is either independently transcribed or processed from a longer RNA by an RNAse enzyme.","definition_xrefs":["PMID:23475961","PMID:14622403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03042":null,"SJAG_04061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"regulatory RNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061980","terms_by_termid":{"GO:0035197":null}}


id: PATO:0001651
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A resistance to a stimulus which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"resistant to","termid":"PATO:0001178"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased resistance to","synonyms":[{"name":"decreased resistance","type":"exact"},{"name":"low resistance to","type":"exact"}],"termid":"PATO:0001651"}


id: PBO:0047339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillin 1","termid":"PBO:0047339"}


id: MONDO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the cardiovascular system.","definition_xrefs":["NCIT:C114940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"cardiovascular neoplasm","termid":"MONDO:0024757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cardiovascular cancer","secondary_identifiers":["DOID:176","MEDGEN:858066","UMLS:C3898472"],"synonyms":[{"name":"cancer of cardiovascular system","type":"exact"},{"name":"cardiovascular neoplasm","type":"broad"},{"name":"cardiovascular system cancer","type":"exact"},{"name":"cardiovascular tumors","type":"exact"},{"name":"cardiovascular tumours","type":"exact"},{"name":"malignant cardiovascular neoplasm","type":"exact"},{"name":"malignant cardiovascular system neoplasm","type":"exact"},{"name":"malignant neoplasm of cardiovascular system","type":"exact"}],"termid":"MONDO:0002100","xrefs":{"Monarch":{"xref_id":"0002100"}}}


id: PATO:0001414
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a catalyst by virtue of the amount of the catalyst's action.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catalytic activity","termid":"PATO:0001414"}


id: MONDO:0023165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"},{"relation_name":"is_a","term_name":"endosalpingiosis","termid":"MONDO:0001283"},{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"florid cystic endosalpingiosis of the uterus","secondary_identifiers":["MEDGEN:419405","MESH:C537064","UMLS:C2931410"],"synonyms":[{"name":"cystic endosalpingiosis of the uterus","type":"related"},{"name":"florid cystic endosalpingiosis","type":"related"},{"name":"intramural florid cystic endosalpingiosis in lower uterine segment of the uterus","type":"related"},{"name":"intramural florid cystic endosalpingiosis of the uterus","type":"related"}],"termid":"MONDO:0023165","xrefs":{"Monarch":{"xref_id":"0023165"}}}


id: GO:0120265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chromosome attachment to the nuclear envelope.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of chromosome attachment to the nuclear envelope","termid":"GO:0120264"},{"relation_name":"negatively_regulates","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of chromosome attachment to the nuclear envelope","synonyms":[{"name":"down regulation of chromosome attachment to the nuclear envelope","type":"exact"},{"name":"down-regulation of chromosome attachment to the nuclear envelope","type":"exact"},{"name":"downregulation of chromosome attachment to the nuclear envelope","type":"exact"},{"name":"inhibition of chromosome attachment to the nuclear envelope","type":"narrow"}],"termid":"GO:0120265"}


id: GO:0030002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of monoatomic anions within a cell. Monatomic anions (also called simple anions) are anions consisting of exactly one atom.","definition_xrefs":["GOC:ceb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic ion homeostasis","termid":"GO:0006873"},{"relation_name":"is_a","term_name":"monoatomic anion homeostasis","termid":"GO:0055081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular monoatomic anion homeostasis","synonyms":[{"name":"cellular anion homeostasis","type":"broad"},{"name":"cellular monoatomic anion homeostasis","type":"exact"}],"termid":"GO:0030002"}


id: PBO:0077418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 154","termid":"PBO:0077418"}


id: GO:0061202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-sculpted gamma-aminobutyric acid transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"},{"relation_name":"part_of","term_name":"clathrin-sculpted gamma-aminobutyric acid transport vesicle","termid":"GO:0061200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane","synonyms":[{"name":"clathrin sculpted GABA transport vesicle membrane","type":"exact"},{"name":"clathrin sculpted gamma-aminobutyric acid transport vesicle membrane","type":"exact"}],"termid":"GO:0061202"}


id: PBO:0001184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Pom34","termid":"PBO:0001184"}


id: MONDO:0100125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A perceptual disorder caused by intoxication with hallucinogen drugs, especially LSD. It is characterized by the recurrence of perceptive disturbances that first develop during intoxication. The contents of the perception and visual imagery range extensively and symptoms may include visual disturbances, hallucinations, and psychoses.","definition_xrefs":["PMID:29547576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perceptual disorders","termid":"MONDO:0024417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hallucinogen-persisting perception disorder","secondary_identifiers":["ICD10CM:F16.183","UMLS:C0236720","MEDGEN:536590"],"synonyms":[{"name":"hallucinogen abuse with hallucinogen persisting perception disorder","type":"narrow"}],"termid":"MONDO:0100125","xrefs":{"Monarch":{"xref_id":"0100125"}}}


id: PBO:0089051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase with rhodanese domain, unknown specificity","termid":"PBO:0089051"}


id: SO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non functional descendant of the coding portion of a coding transcript, part of a pseudogene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_region","termid":"SO:0000462"},{"relation_name":"part_of","term_name":"pseudogenic_transcript","termid":"SO:0000516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_CDS","synonyms":[{"name":"INSDC_feature:CDS","type":"broad"},{"name":"INSDC_qualifier:pseudo","type":"exact"},{"name":"pseudogenic CDS","type":"exact"}],"termid":"SO:0002087"}


id: PBO:0049337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2H2 family member C, copy 2","termid":"PBO:0049337"}


id: MONDO:0003075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinoblastoma involving both eyes. This occurs in the majority of patients with the inherited variant. A minority of patient with bilateral retinoblastoma were found to have involvement of the pineal gland as well.","definition_xrefs":["NCIT:C8713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"bilateral retinoblastoma","secondary_identifiers":["NANDO:2201038","DOID:4650","UMLS:C0854914","MEDGEN:163163"],"termid":"MONDO:0003075","xrefs":{"Monarch":{"xref_id":"0003075"}}}


id: PBO:0109380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 11","termid":"PBO:0109380"}


id: GO:1900522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to amylopectin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to amylopectin","termid":"GO:1900521"},{"relation_name":"negatively_regulates","term_name":"response to amylopectin","termid":"GO:0044591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to amylopectin","synonyms":[{"name":"down regulation of response to amylopectin","type":"exact"},{"name":"down-regulation of response to amylopectin","type":"exact"},{"name":"downregulation of response to amylopectin","type":"exact"},{"name":"inhibition of response to amylopectin","type":"narrow"}],"termid":"GO:1900522"}


id: PBO:0059315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L54","termid":"PBO:0059315"}


id: PBO:0052530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 3","termid":"PBO:0052530"}


id: MONDO:0032761
data:
  {"annotated_genes":["SJAG_04554"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87495],"is_not":false,"summary":null,"term":"MONDO:0032761"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04554":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 114","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22662","DOID:0111642","OMIM:618456","UMLS:C5193107","MEDGEN:1684024"],"synonyms":[{"name":"DFNB114","type":"narrow"},{"name":"deafness, autosomal recessive 114","type":"narrow"}],"termid":"MONDO:0032761","terms_by_termid":{"MONDO:0032761":null},"xrefs":{"Monarch":{"xref_id":"0032761"}}}


id: MONDO:0019538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia that is caused by stress.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired secondary polycythemia","termid":"MONDO:0016541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"Gaisbock syndrome","secondary_identifiers":["GARD:19104","SCTID:36874002","MedDRA:10042217","MEDGEN:745735","MedDRA:10053885","NCIT:C27174","Orphanet:90041","UMLS:C2242785","icd11.foundation:533704171","DOID:2838"],"synonyms":[{"name":"Gaisbock's syndrome","type":"exact"},{"name":"Gaisboeck's syndrome","type":"related"},{"name":"GaisböCK syndrome","type":"related"},{"name":"Pseudopolycythaemia","type":"related"},{"name":"Pseudopolycythemia","type":"related"},{"name":"polycythemia, emotional","type":"exact"},{"name":"stress erythrocytosis","type":"exact"},{"name":"stress polycythemia","type":"exact"}],"termid":"MONDO:0019538","xrefs":{"Monarch":{"xref_id":"0019538"}}}


id: GO:0031609
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proteasome core subcomplex that constitutes the two inner rings of the cytosolic proteasome core complex.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex, beta-subunit complex","termid":"GO:0019774"},{"relation_name":"part_of","term_name":"cytosolic proteasome core complex","termid":"GO:0031603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0005829","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cytosolic proteasome core complex, beta-subunit complex","termid":"GO:0031609"}


id: SO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR variant of exonic sequence of the 3' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3_prime_UTR_variant","termid":"SO:0001624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3_prime_UTR_exon_variant","synonyms":[{"name":"3 prime UTR exon variant","type":"exact"}],"termid":"SO:0002089"}


id: PBO:0057985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3911","termid":"PBO:0057985"}


id: MONDO:0008567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland papillary carcinoma","termid":"MONDO:0005075"},{"relation_name":"is_a","term_name":"familial nonmedullary thyroid carcinoma","termid":"MONDO:0017896"},{"relation_name":"is_a","term_name":"NKX2-1 related choreoathetosis and congenital hypothyroidism with or without pulmonary dysfunction","termid":"MONDO:0100520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid cancer, nonmedullary, 1","secondary_identifiers":["OMIM:188550","MEDGEN:1648293","UMLS:C4721429"],"synonyms":[{"name":"NMTC1","type":"related"},{"name":"familial nonmedullary thyroid cancer, papillary","type":"related"},{"name":"nonmedullary thyroid carcinoma, papillary","type":"related"},{"name":"papillary carcinoma of thyroid","type":"related"},{"name":"thyroid cancer, nonmedullary, 1","type":"exact"},{"name":"thyroid cancer, nonmedullary, type 1","type":"exact"}],"termid":"MONDO:0008567","xrefs":{"Monarch":{"xref_id":"0008567"}}}


id: GO:0021682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a nerve to attain its fully functional state.","definition_xrefs":["GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"nerve development","termid":"GO:0021675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nerve maturation","termid":"GO:0021682"}


id: GO:0004419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = acetoacetate + acetyl-CoA.","definition_xrefs":["RHEA:24404","EC:4.1.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA lyase activity","secondary_identifiers":["Reactome:R-HSA-6788597","MetaCyc:HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN","Reactome:R-HSA-74180","KEGG_REACTION:R01360"],"synonyms":[{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA acetoacetate-lyase (acetyl-CoA-forming)","type":"related"},{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA acetoacetate-lyase activity","type":"related"},{"name":"3-hydroxy-3-methylglutarate-CoA lyase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl CoA cleaving enzyme","type":"related"},{"name":"3-hydroxy-3-methylglutaryl coenzyme A lyase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA lyase activity","type":"related"},{"name":"HMG-CoA lyase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A lyase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A-cleaving enzyme","type":"related"}],"termid":"GO:0004419"}


id: MONDO:0021725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Abderhalden-Kaufmann-Lignac syndrome (obsolete MONDO:0021725)","termid":"MONDO:0021725","xrefs":{"Monarch":{"xref_id":"0021725"}}}


id: GO:0042541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"hemoglobin metabolic process","termid":"GO:0020027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemoglobin biosynthetic process","synonyms":[{"name":"haemoglobin biosynthesis","type":"exact"},{"name":"haemoglobin biosynthetic process","type":"exact"},{"name":"hemoglobin anabolism","type":"exact"},{"name":"hemoglobin biosynthesis","type":"exact"},{"name":"hemoglobin formation","type":"exact"},{"name":"hemoglobin synthesis","type":"exact"}],"termid":"GO:0042541"}


id: MONDO:0005593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic inflammatory process that affects the tissues that surround and support the teeth.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodontitis","termid":"MONDO:0005076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic periodontitis","secondary_identifiers":["ICD9:523.40","SCTID:5689008","icd11.foundation:1242548497","NCIT:C35326","ICD10CM:K05.3","MESH:D055113","EFO:0006343","ICD9:523.4"],"synonyms":[{"name":"periodontitis, chronic","type":"exact"}],"termid":"MONDO:0005593","xrefs":{"Monarch":{"xref_id":"0005593"}}}


id: MONDO:0000783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A fruit allergy triggered by Citrus sinensis plant fruit food product.","definition_xrefs":["DOID:0060508"],"gene_count":0,"genotype_count":0,"name":"obsolete orange allergy (obsolete MONDO:0000783)","synonyms":[{"name":"Citrus sinensis fruit allergy","type":"exact"},{"name":"orange allergy","type":"exact"}],"termid":"MONDO:0000783","xrefs":{"Monarch":{"xref_id":"0000783"}}}


id: PBO:0054924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2338","termid":"PBO:0054924"}


id: FYPO:0004243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to DNA damage","synonyms":[{"name":"decreased protein kinase activity in response to DNA damage","type":"related"},{"name":"reduced protein kinase activity during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0004243"}


id: PBO:0003438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf15","termid":"PBO:0003438"}


id: MOD:01398
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-propanoyl-L-lysine.","definition_xrefs":["PubMed:17684016","RESID:AA0475","Unimod:58#K","PubMed:17267393","PubMed:20715035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"propanoylated residue","termid":"MOD:01894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155","MOD:01875"],"is_obsolete":false,"name":"N6-propanoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(propanoylamino)hexanoic acid","type":"exact"},{"name":"2-amino-6-propionylaminocaproic acid","type":"exact"},{"name":"MOD_RES N6-propionyllysine","type":"exact"},{"name":"N(zeta)-propanoyllysine","type":"exact"},{"name":"N6-(1-oxopropyl)-L-lysine","type":"exact"},{"name":"N6-propanoyl-L-lysine","type":"exact"},{"name":"N6-propionyllysine","type":"exact"},{"name":"epsilon-propanoyl-L-lysine","type":"exact"},{"name":"epsilon-propionyl-L-lysine","type":"exact"}],"termid":"MOD:01398"}


id: GO:0009469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class II cytochrome c (obsolete GO:0009469)","synonyms":[{"name":"class II cytochrome c","type":"exact"}],"termid":"GO:0009469"}


id: PBO:0069061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 308, pseudogene","termid":"PBO:0069061"}


id: MONDO:0035534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive microcephalic primordial dwarfism characterized by congenital microcephaly and craniofacial features associated with a spectrum of limb abnormalities ranging from mild to severe. Short stature is frequently observed and often is severe.","definition_xrefs":["Orphanet:572761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DONSON-related microcephaly-short stature-limb abnormalities spectrum","secondary_identifiers":["MEDGEN:1814482","GARD:22314","UMLS:C5681722"],"termid":"MONDO:0035534","xrefs":{"Monarch":{"xref_id":"0035534"}}}


id: GO:0071945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates flagellum-dependent motility in bacteria by modulating the speed or direction of rotation of a rotary flagellar motor, mediated by interactions between the braking protein.","definition_xrefs":["GOC:jl","GOC:cilia","PMID:20371342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bacterial-type flagellum-dependent cell motility","termid":"GO:1902021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed","synonyms":[{"name":"regulation of bacterial-type flagellar cell motility by regulation of motor speed","type":"related"},{"name":"regulation of bacterial-type flagellum cell motility by regulation of motor speed","type":"exact"},{"name":"regulation of flagellar cell motility by regulation of motor speed","type":"broad"}],"termid":"GO:0071945"}


id: PBO:0002026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein Rad24","termid":"PBO:0002026"}


id: MONDO:0015638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign partial epilepsy of infancy with complex partial seizures is a rare infantile epilepsy syndrome characterized by complex partial seizures presenting with motion arrest, decreased responsiveness, staring, automatisms and mild clonic movements, with or without apneas, normal interictal EEG and focal, mostly temporal discharges in ictal EEG. Most often, seizures occur in clusters and have a good response to treatment. Psychomotor development is normal.","definition_xrefs":["Orphanet:166299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign non-familial infantile seizures","termid":"MONDO:0015637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign partial epilepsy of infancy with complex partial seizures","secondary_identifiers":["UMLS:C4749347","icd11.foundation:147618459","MEDGEN:1654146","GARD:20072"],"termid":"MONDO:0015638","xrefs":{"Monarch":{"xref_id":"0015638"}}}


id: PBO:0075180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 10","termid":"PBO:0075180"}


id: GO:0036322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of pancreatic polypeptide (PP) from a cell. Pancreatic polypeptide is a 36 amino acid polypeptide secreted by islets of Langerhans cells in the pancreas.","definition_xrefs":["GOC:cjm","PMID:12730894","Wikipedia:Pancreatic_polypeptide"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"pancreatic polypeptide secretion","synonyms":[{"name":"PP secretion","type":"narrow"}],"termid":"GO:0036322"}


id: GO:1904444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of Sertoli cell barrier.","definition_xrefs":["GO_REF:0000058","PMID:18057314","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"establishment of Sertoli cell barrier","termid":"GO:0097368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of Sertoli cell barrier","synonyms":[{"name":"regulation of establishment of BTB","type":"exact"},{"name":"regulation of establishment of SCB","type":"exact"},{"name":"regulation of establishment of blood-testis barrier","type":"exact"}],"termid":"GO:1904444"}


id: GO:0102585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthocyanin A3 + malonyl-CoA = anthocyanin A5 + CoA.","definition_xrefs":["PMID:17292360","RHEA:72871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-glucoside malonyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15331"],"termid":"GO:0102585"}


id: PATO:0001449
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the bearer's cartilage quantities.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Cartilaginous"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilaginous","termid":"PATO:0001449"}


id: PBO:0028318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitochondrial_fission_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028318"}


id: PBO:0047828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP1 antisense RNA 1","termid":"PBO:0047828"}


id: SO:0000793
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000793 engineered_DNA (obsolete SO:0000793)","termid":"SO:0000793"}


id: PBO:0076396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adaptor 3","termid":"PBO:0076396"}


id: GO:0030619
data:
  {"annotated_genes":["SJAG_04497","SJAG_04911","SJAG_03983","SJAG_05009"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73501,76415,77158,113588],"is_not":false,"summary":null,"term":"GO:0030619"}]},"cv_name":"molecular_function","definition":"Binding to a U1 small nuclear RNA (U1 snRNA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03983":null,"SJAG_04497":null,"SJAG_04911":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"U1 snRNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030619","terms_by_termid":{"GO:0030619":null}}


id: PBO:0067723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 21","termid":"PBO:0067723"}


id: PATO:0001360
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having thin filamentous extensions at its edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamentous","termid":"PATO:0001360"}


id: PBO:0028108
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_inositol_pentakisphosphate_level","termid":"PBO:0028108"}


id: PBO:0036495
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose metabolism cluster","termid":"PBO:0036495"}


id: GO:0060210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The estrous cycle phase in which there is subsiding follicular function.","definition_xrefs":["ISBN:0721662544","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"estrous cycle phase","termid":"GO:0060206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metestrus","termid":"GO:0060210"}


id: PBO:0043320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP-Gly domain containing linker protein 2","termid":"PBO:0043320"}


id: PBO:0053324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 113","termid":"PBO:0053324"}


id: PBO:0080243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 6, pseudogene","termid":"PBO:0080243"}


id: GO:0050796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of insulin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"insulin secretion","termid":"GO:0030073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of insulin secretion","secondary_identifiers":["Reactome:R-HSA-422356"],"termid":"GO:0050796"}


id: PR:Q9USY3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein MAK10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04003","PANTHER:PTHR21373:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase, 35 NatC auxiliary subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.03","secondary_identifiers":["UniProtKB:Q9USY3"],"synonyms":[{"name":"N-terminal acetyltransferase C complex subunit mak10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NatC complex subunit mak10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NAA35","type":"exact"}],"termid":"PR:Q9USY3"}


id: GO:0030091
data:
  {"annotated_genes":["SJAG_00365","SJAG_01628","SJAG_00419"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65836,95898,113770],"is_not":false,"summary":null,"term":"GO:0030091"}]},"cv_name":"biological_process","definition":"The process of restoring a protein to its original state after damage by such things as oxidation or spontaneous decomposition of residues.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00365":null,"SJAG_00419":null,"SJAG_01628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein repair","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5676934"],"termid":"GO:0030091","terms_by_termid":{"GO:0030091":null}}


id: MONDO:0003619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute or chronic inflammation of the fallopian tube. It is most often caused by Neisseria gonorrhoeae and Chlamydia trachomatis infections. The infections usually originate in the vagina and ascend to the fallopian tube. Symptoms include abdominal, pelvic, and lower back pain, pain during ovulation and sexual intercourse, fever, nausea, and vomiting. Complications include infertility and ectopic pregnancy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pelvic inflammatory disease","termid":"MONDO:0000922"},{"relation_name":"is_a","term_name":"fallopian tube disorder","termid":"MONDO:0002156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salpingitis","secondary_identifiers":["MESH:D012488","MEDGEN:20646","NCIT:C26880","SCTID:88157006","DOID:5733","UMLS:C0036130"],"synonyms":[{"name":"fallopian tube inflammation","type":"exact"},{"name":"inflammation of fallopian tube","type":"exact"}],"termid":"MONDO:0003619","xrefs":{"Monarch":{"xref_id":"0003619"}}}


id: PBO:0089443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type (predicted)","termid":"PBO:0089443"}


id: PBO:0090962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein Sls1","termid":"PBO:0090962"}


id: GO:0044592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of pullulan stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pullulan","termid":"GO:0044592"}


id: SO:0000658
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat that is located at dispersed sites in the genome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dispersed_repeat","secondary_identifiers":["http://en.wikipedia.org/wiki/Interspersed_repeat"],"synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:dispersed","type":"exact"},{"name":"dispersed repeat","type":"exact"},{"name":"interspersed repeat","type":"exact"}],"termid":"SO:0000658"}


id: GO:0010956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of calcidiol 1-monooxygenase activity. Calcidiol 1-monooxygenase activity is the catalysis of the reaction: calcidiol + NADPH + H+ + O2 = calcitriol + NADP+ + H2O.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vitamin D biosynthetic process","termid":"GO:0010957"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"is_a","term_name":"negative regulation of monooxygenase activity","termid":"GO:0032769"},{"relation_name":"is_a","term_name":"regulation of calcidiol 1-monooxygenase activity","termid":"GO:0060558"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"negatively_regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"negative regulation of calcidiol 1-monooxygenase activity","termid":"GO:0010956"}


id: MONDO:0010007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microbrachycephaly-ptosis-cleft lip syndrome is characterized by the association of intellectual deficit, microbrachycephaly, hypotelorism, palpebral ptosis, a thin/long face, cleft lip, and anomalies of the lumbar vertebra, sacrum and pelvis. It has been described in two Brazilian sisters. Transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:2511"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microbrachycephaly-ptosis-cleft lip syndrome","secondary_identifiers":["MEDGEN:162914","GARD:3596","UMLS:C0796142","OMIM:268850"],"synonyms":[{"name":"Richieri Costa-Guion Almeida-Ramos syndrome","type":"exact"},{"name":"Richieri-COSTA/Guion-Almeida syndrome","type":"related"},{"name":"microbrachycephaly ptosis cleft lip","type":"related"},{"name":"sao Paulo MCA/Mr syndrome","type":"related"},{"name":"short stature, intellectual disability, eye anomalies, and cleft Lip/palate","type":"related"},{"name":"short stature, mental retardation, eye anomalies, and cleft Lip/palate","type":"related"}],"termid":"MONDO:0010007","xrefs":{"Monarch":{"xref_id":"0010007"}}}


id: MONDO:0015466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cranio-osteoarthropathy (COA) is a form of primary hypertrophic osteoarthropathy characterized by delayed closure of the cranial sutures and fontanels, digital clubbing, arthropathy, and periostosis.","definition_xrefs":["Orphanet:1525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypertrophic osteoarthropathy","termid":"MONDO:0016620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cranio-osteoarthropathy","secondary_identifiers":["icd11.foundation:225223076","MEDGEN:394824","UMLS:C2678439","SCTID:720753002","GARD:1564"],"synonyms":[{"name":"Currarino disease","type":"exact"},{"name":"Currarino idiopathic osteoarthropathy","type":"exact"},{"name":"Reginato-Schiapachasse syndrome","type":"exact"},{"name":"cranio osteoarthropathy","type":"related"}],"termid":"MONDO:0015466","xrefs":{"Monarch":{"xref_id":"0015466"}}}


id: PBO:0085888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in negative regulation of expression of spliceosome components PRP4 and PRP3; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085888"}


id: PBO:0083820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member and ortholog of mammalian WDR5","termid":"PBO:0083820"}


id: PR:Q10310
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug68 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 68 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.07","synonyms":[{"name":"Spom972h-mug68","type":"exact"}],"termid":"PR:Q10310"}


id: MONDO:0020748
data:
  {"annotated_genes":["SJAG_04277"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87214],"is_not":false,"summary":null,"term":"MONDO:0020748"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sitosterolemia","termid":"MONDO:0008863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"sitosterolemia 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618666","MEDGEN:1684715","DOID:0060983","GARD:16372","UMLS:C5231453"],"synonyms":[{"name":"STSL2","type":"exact"}],"termid":"MONDO:0020748","terms_by_termid":{"MONDO:0020748":null},"xrefs":{"Monarch":{"xref_id":"0020748"}}}


id: PBO:0004213
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated by mRNA stability","termid":"PBO:0004213"}


id: PBO:0086137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for mismatch repair in mitosis and meiosis; also required for crossing over during meiosis; forms a complex with Pms1p and Msh2p-Msh3p during mismatch repair; required for silencing at the silent mating-type loci and telomeres; human homolog is associated with hereditary non-polyposis colon cancer","termid":"PBO:0086137"}


id: MONDO:0001346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete distal muscular dystrophy (obsolete MONDO:0001346)","termid":"MONDO:0001346","xrefs":{"Monarch":{"xref_id":"0001346"}}}


id: PBO:0057812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3133","termid":"PBO:0057812"}


id: MONDO:0001035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypopyon","termid":"MONDO:0001036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hypopyon ulcer","secondary_identifiers":["ICD9:370.04","MEDGEN:509768","UMLS:C0155070","DOID:10442","SCTID:6395007"],"termid":"MONDO:0001035","xrefs":{"Monarch":{"xref_id":"0001035"}}}


id: PBO:0047236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member H","termid":"PBO:0047236"}


id: GO:0008316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the vitelline membrane of an egg. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of vitelline membrane","termid":"GO:0008316"}


id: PATO:0000745
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000745 behavioral quality value (obsolete PATO:0000745)","termid":"PATO:0000745"}


id: GO:0003239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the conus arteriosus is generated and organized. The conus arteriosus is a valved chamber with thick muscular walls stemming from the ventricle and connecting to the pulmonary trunk.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"},{"relation_name":"part_of","term_name":"conus arteriosus development","termid":"GO:0003238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conus arteriosus morphogenesis","termid":"GO:0003239"}


id: GO:0050975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a touch stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. The perception of touch in animals is mediated by mechanoreceptors in the skin and mucous membranes and is the sense by which contact with objects gives evidence as to certain of their qualities. Different types of touch can be perceived (for example, light, coarse, pressure and tickling) and the stimulus may be external or internal (e.g. the feeling of a full stomach).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of touch","secondary_identifiers":["Wikipedia:Touch"],"synonyms":[{"name":"perception of touch","type":"exact"},{"name":"tactile sense","type":"exact"},{"name":"taction","type":"exact"},{"name":"tactition","type":"exact"}],"termid":"GO:0050975"}


id: PBO:0054773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2185","termid":"PBO:0054773"}


id: FYPO:0000677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype in which protein localization to the prospore membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to prospore membrane","synonyms":[{"name":"abnormal protein localisation to prospore membrane","type":"exact"},{"name":"abnormal protein localization to forespore membrane","type":"exact"}],"termid":"FYPO:0000677"}


id: PBO:0059031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMP20 antisense RNA 1","termid":"PBO:0059031"}


id: GO:0018564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9H-carbazole + H+ + NAD(P)H + O2 = 2'-aminobiphenyl-2,3-diol + NAD(P)+.","definition_xrefs":["EC:1.14.12.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"carbazole 1,9a-dioxygenase [NAD(P)H] activity","secondary_identifiers":["UM-BBD_reactionID:r0456"],"synonyms":[{"name":"CARDO","type":"exact"},{"name":"carbazole 1,9alpha-dioxygenase activity","type":"exact"}],"termid":"GO:0018564"}


id: FYPO:0000147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of establishment or maintenance of cell polarity","termid":"FYPO:0000191"},{"relation_name":"is_a","term_name":"abnormal regulation of cell growth","termid":"FYPO:0001392"},{"relation_name":"is_a","term_name":"abnormal cell polarity","termid":"FYPO:0005568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005568"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005568","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal NETO","synonyms":[{"name":"abnormal NETO during vegetative growth","type":"exact"},{"name":"abnormal cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"abnormal new end take-off","type":"exact"},{"name":"abnormal switch from monopolar to bipolar cell growth","type":"exact"}],"termid":"FYPO:0000147"}


id: MONDO:0971142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesothelioma","termid":"MONDO:0006292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"diffused pleural mesothelioma","secondary_identifiers":["MEDGEN:1863751","UMLS:C5925095","Orphanet:675837"],"termid":"MONDO:0971142","xrefs":{"Monarch":{"xref_id":"0971142"}}}


id: MONDO:0100536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth agenesis","termid":"MONDO:0005486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth agenesis, selective, with orofacial cleft","secondary_identifiers":["UMLS:C1970117","MEDGEN:409991"],"termid":"MONDO:0100536","xrefs":{"Monarch":{"xref_id":"0100536"}}}


id: PBO:0068731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 2, pseudogene","termid":"PBO:0068731"}


id: GO:0102898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + levopimaradienol + NADPH + O2 = levopiramadiene-diol + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete levopimaradienol hydroxylase activity (obsolete GO:0102898)","termid":"GO:0102898"}


id: FYPO:0005234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which MCM complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:12604790","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished MCM complex binding","synonyms":[{"name":"MCM complex binding abolished","type":"exact"}],"termid":"FYPO:0005234"}


id: GO:0141146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of a host tissue. This can occur via the disruption of the extracellular matrix, or the detachment of cells from the extracellular matrix, or the dissociation of the cells composing that tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:26355030","PMID:11982763","PMID:14651638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host anatomical structure","termid":"GO:0052111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host tissue","synonyms":[{"name":"cytopathogenic effect","type":"related"}],"termid":"GO:0141146"}


id: PBO:0090138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES and SAM complex subunit Mdm10","termid":"PBO:0090138"}


id: GO:0140357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of heme from inside the vacuole across the vacuolar membrane and into the cytosol.","definition_xrefs":["PMID:28193844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"heme transmembrane transport","termid":"GO:0035351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"heme export from vacuole to cytoplasm","termid":"GO:0140357"}


id: GO:1903923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein processing in phagocytic vesicle.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:als","PMID:23325791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein processing","termid":"GO:0010954"},{"relation_name":"is_a","term_name":"regulation of protein processing in phagocytic vesicle","termid":"GO:1903921"},{"relation_name":"positively_regulates","term_name":"protein processing in phagocytic vesicle","termid":"GO:1900756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"positive regulation of protein processing in phagocytic vesicle","synonyms":[{"name":"activation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"activation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"activation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"narrow"},{"name":"activation of protein maturation by peptide bond cleavage in phagosome","type":"narrow"},{"name":"activation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"narrow"},{"name":"activation of protein maturation by peptide bond hydrolysis in phagosome","type":"narrow"},{"name":"activation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"activation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"activation of protein processing in phagocytic vesicle","type":"narrow"},{"name":"activation of protein processing in phagosome","type":"narrow"},{"name":"positive regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"positive regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"positive regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"positive regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"positive regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"positive regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"positive regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"positive regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"positive regulation of protein processing in phagosome","type":"exact"},{"name":"up regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"up regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"up regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"up regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"up regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"up regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"up regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"up regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"up regulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"up regulation of protein processing in phagosome","type":"exact"},{"name":"up-regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"up-regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"up-regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"up-regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"up-regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"up-regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"up-regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"up-regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"up-regulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"up-regulation of protein processing in phagosome","type":"exact"},{"name":"upregulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"upregulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"upregulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"upregulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"upregulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"upregulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"upregulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"upregulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"upregulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"upregulation of protein processing in phagosome","type":"exact"}],"termid":"GO:1903923"}


id: GO:1902393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of exodeoxyribonuclease activity.","definition_xrefs":["GOC:TermGenie","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of exodeoxyribonuclease activity (obsolete GO:1902393)","synonyms":[{"name":"down regulation of exodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of exodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of exodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of exodeoxyribonuclease activity","type":"narrow"}],"termid":"GO:1902393"}


id: PBO:0052403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 4","termid":"PBO:0052403"}


id: GO:0007060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle in a male.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"},{"relation_name":"part_of","term_name":"male meiotic nuclear division","termid":"GO:0007140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"male meiosis chromosome segregation","termid":"GO:0007060"}


id: FYPO:0007748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of spindle assembly during meiosis I is longer than normal. The total duration of spindle phases I (initial assembly and first stage of elongation) and II (in which elongation normally pauses, and which coincides with metaphase I) is increased due to prolongation of either or both phases.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis I","termid":"FYPO:0007745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of spindle assembly during meiosis I","synonyms":[{"name":"increased duration of meiosis I spindle assembly","type":"exact"},{"name":"increased duration of meiosis I spindle formation","type":"exact"},{"name":"increased duration of meiotic spindle assembly during meiosis I","type":"exact"},{"name":"increased duration of meiotic spindle formation during meiosis I","type":"exact"},{"name":"increased duration of spindle assembly phase I and II during meiosis I","type":"exact"},{"name":"prolonged meiosis I spindle assembly","type":"exact"},{"name":"prolonged meiosis I spindle formation","type":"exact"},{"name":"prolonged meiosis I spindle formation phase I and II","type":"exact"},{"name":"prolonged meiosis I spindle phase I and II","type":"exact"},{"name":"prolonged meiotic spindle assembly during meiosis I","type":"exact"},{"name":"prolonged meiotic spindle formation during meiosis I","type":"exact"}],"termid":"FYPO:0007748"}


id: PBO:0042849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 58","termid":"PBO:0042849"}


id: PBO:0087247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine kinase and DNA damage checkpoint effector; mediates cell cycle arrest via phosphorylation of Pds1p; phosphorylated by checkpoint signal transducer Mec1p; homolog of S. pombe and mammalian Chk1 checkpoint kinase","termid":"PBO:0087247"}


id: MONDO:0000548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive malignant neoplasm that arises from the ovary and is characterized by a predominance of clear and hobnail malignant epithelial cells.","definition_xrefs":["NCIT:C40077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant epithelial tumor of ovary","termid":"MONDO:0018364"},{"relation_name":"is_a","term_name":"ovarian clear cell tumor","termid":"MONDO:0021144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian clear cell cancer","secondary_identifiers":["DOID:0050934","MEDGEN:276544","UMLS:C1518230"],"synonyms":[{"name":"clear-cell ovarian carcinoma","type":"exact"},{"name":"malignant ovarian clear cell neoplasm","type":"exact"},{"name":"malignant ovarian clear cell tumor","type":"exact"},{"name":"malignant ovarian clear cell tumour","type":"exact"},{"name":"ovarian clear cell carcinoma","type":"related"}],"termid":"MONDO:0000548","xrefs":{"Monarch":{"xref_id":"0000548"}}}


id: PBO:0085222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pantothenate kinase, ATP:D-pantothenate 4'-phosphotransferase; catalyzes the first committed step in the universal biosynthetic pathway for synthesis of coenzyme A (CoA); transcriptionally regulated by Upc2p via a sterol response element","termid":"PBO:0085222"}


id: GO:0048295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching to IgE isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isotype switching","termid":"GO:0045830"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgE isotypes","termid":"GO:0048293"},{"relation_name":"positively_regulates","term_name":"isotype switching to IgE isotypes","termid":"GO:0048289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of isotype switching to IgE isotypes","synonyms":[{"name":"activation of isotype switching to IgE isotypes","type":"narrow"},{"name":"positive regulation of class switch recombination to IgE isotypes","type":"exact"},{"name":"positive regulation of class switching to IgE isotypes","type":"exact"},{"name":"positive regulation of isotype switch recombination to IgE isotypes","type":"exact"},{"name":"stimulation of isotype switching to IgE isotypes","type":"narrow"},{"name":"up regulation of isotype switching to IgE isotypes","type":"exact"},{"name":"up-regulation of isotype switching to IgE isotypes","type":"exact"},{"name":"upregulation of isotype switching to IgE isotypes","type":"exact"}],"termid":"GO:0048295"}


id: FYPO:0004100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, is elongated, and contains a nucleus with abnormal morphology.","definition_xrefs":["PMID:7957061","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"},{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, elongated cell","termid":"FYPO:0004603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000002","FYPO:0002403","FYPO:0005447","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, elongated cell with abnormal nuclear morphology","synonyms":[{"name":"inviable following spore germination, without cell division, elongated cell with abnormal chromosome morphology","type":"exact"},{"name":"inviable germinated spore, without cell division, elongated cell with abnormal chromosome morphology","type":"exact"},{"name":"lethal after spore germination, without cell division, elongated cell with abnormal nuclear morphology","type":"exact"}],"termid":"FYPO:0004100"}


id: GO:0010658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a striated muscle cell and result in its death. Striated muscle cells make up striated muscle fibers which are divided by transverse bands into striations.","definition_xrefs":["GOC:mtg_apoptosis","GOC:tb","CL:0000737","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell apoptotic process","termid":"GO:0010657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle cell apoptotic process","synonyms":[{"name":"striated muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010658"}


id: GO:0005321
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete high-density lipoprotein (obsolete GO:0005321)","synonyms":[{"name":"HDL","type":"exact"},{"name":"high-density lipoprotein","type":"exact"}],"termid":"GO:0005321"}


id: MONDO:0005275
data:
  {"annotated_genes":["SJAG_00169","SJAG_03125","SJAG_00566","SJAG_04114","SJAG_02805","SJAG_03689","SJAG_03626","SJAG_05979","SJAG_02194","SJAG_03855","SJAG_00570","SJAG_01159","SJAG_01836","SJAG_00229","SJAG_03453","SJAG_02206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010926"},{"annotations":[85419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"},{"annotations":[87157,87156,87688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[86554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[86702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"},{"annotations":[86915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957261"},{"annotations":[86914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957263"},{"annotations":[86683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957294"},{"annotations":[86514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013878"},{"annotations":[85644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014612"},{"annotations":[87477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030690"},{"annotations":[87421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009329"},{"annotations":[87400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100215"},{"annotations":[86216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100220"},{"annotations":[86192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014206"}]},"cv_name":"mondo","definition":"A disease involving the lung.","direct_ancestors":[{"relation_name":"is_a","term_name":"lower respiratory tract disorder","termid":"MONDO:0000270"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00229":null,"SJAG_00566":null,"SJAG_00570":null,"SJAG_01159":null,"SJAG_01836":null,"SJAG_02194":null,"SJAG_02206":null,"SJAG_02805":null,"SJAG_03125":null,"SJAG_03453":null,"SJAG_03626":null,"SJAG_03689":null,"SJAG_03855":null,"SJAG_04114":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"lung disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:7399","MESH:D008171","NCIT:C3198","UMLS:C0024115","DOID:850","SCTID:19829001","ICD9:518.89","EFO:0003818"],"synonyms":[{"name":"disease of lung","type":"exact"},{"name":"disease or disorder of lung","type":"exact"},{"name":"disorder of lung","type":"exact"},{"name":"lung disease","type":"exact"},{"name":"lung disease or disorder","type":"exact"},{"name":"lung disorder","type":"exact"},{"name":"lung disorders","type":"exact"},{"name":"pulmonary disease","type":"exact"},{"name":"pulmonary diseases","type":"exact"},{"name":"pulmonary disorder","type":"exact"},{"name":"pulmonary disorders","type":"exact"}],"termid":"MONDO:0005275","terms_by_termid":{"MONDO:0008903":null,"MONDO:0009329":null,"MONDO:0010926":null,"MONDO:0011014":null,"MONDO:0011871":null,"MONDO:0013878":null,"MONDO:0014206":null,"MONDO:0014612":null,"MONDO:0030690":null,"MONDO:0100215":null,"MONDO:0100220":null,"MONDO:0800029":null,"MONDO:0957261":null,"MONDO:0957263":null,"MONDO:0957294":null},"xrefs":{"Monarch":{"xref_id":"0005275"}}}


id: GO:1904596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of wound healing connective tissue replacement, which may be replaced with fibrotic material, that occurs as part of an inflammatory response.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:krc","PMID:18245812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of connective tissue replacement","termid":"GO:1905203"},{"relation_name":"regulates","term_name":"connective tissue replacement involved in inflammatory response wound healing","termid":"GO:0002248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of connective tissue replacement involved in inflammatory response wound healing","synonyms":[{"name":"regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"regulation of fibrosis during inflammatory response","type":"narrow"}],"termid":"GO:1904596"}


id: PBO:0109617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAGE family member 2 (pseudogene)","termid":"PBO:0109617"}


id: PBO:0064133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2","termid":"PBO:0064133"}


id: PBO:0043325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 2, pseudogene 1","termid":"PBO:0043325"}


id: MONDO:1010978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Huntington disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease, non-human animal","termid":"MONDO:1010231"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huntington disease, sheep","secondary_identifiers":["OMIA:000485-9940"],"termid":"MONDO:1010978","xrefs":{"Monarch":{"xref_id":"1010978"}}}


id: PBO:0055447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2878","termid":"PBO:0055447"}


id: PBO:0088833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase","termid":"PBO:0088833"}


id: GO:0039560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host IRF9 (interferon regulatory factor-9), a transcription factor involved in the innate immune response. For example, viral infection triggers binding of IRF9 to phosphorylated STAT1 and STAT2, forming the ISGF3 complex. The ISGF3 complex migrates to the nucleus and activates transcription of IFN-responsive genes.","definition_xrefs":["PMID:19109390","PMID:10388655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of host IRF9 activity","secondary_identifiers":["VZ:683"],"synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of host IRF9 activity","type":"narrow"},{"name":"inhibition of host IRF9 by virus","type":"narrow"},{"name":"inhibition of host interferon regulatory factor-9 by virus","type":"narrow"},{"name":"suppression by virus of host IRF9 activity","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of host IRF9 activity","type":"narrow"},{"name":"suppression by virus of host interferon regulatory factor 9 activity","type":"narrow"}],"termid":"GO:0039560"}


id: GO:0019426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the reduction of sulfate to thiosulfate via bisulfite.","definition_xrefs":["MetaCyc:P224-PWY"],"gene_count":0,"genotype_count":0,"name":"obsolete bisulfite reduction (obsolete GO:0019426)","synonyms":[{"name":"bisulphite reduction","type":"exact"}],"termid":"GO:0019426"}


id: PBO:0073643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 30, pseudogene","termid":"PBO:0073643"}


id: PBO:0108601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-positively_regulates_characteristic","termid":"PBO:0108601"}


id: PBO:0076063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm tail PG-rich repeat containing 1","termid":"PBO:0076063"}


id: GO:0016203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which a skeletal muscle attaches to its target (such as bone or body wall).","definition_xrefs":["GOC:sart","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"skeletal muscle organ development","termid":"GO:0060538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle attachment","termid":"GO:0016203"}


id: PBO:0031696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_import","termid":"PBO:0031696"}


id: PBO:0055939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 46","termid":"PBO:0055939"}


id: MOD:01051
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-nitrobenzoyl","synonyms":[{"name":"NBz","type":"exact"}],"termid":"MOD:01051"}


id: PBO:0079748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase L3","termid":"PBO:0079748"}


id: FYPO:0005015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which rRNA modification, the covalent alteration of one or more nucleotides within an rRNA molecule, is abnormal.","definition_xrefs":["GO:0000154","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"},{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"},{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal rRNA modification","synonyms":[{"name":"abnormal rRNA modification during mitotic cell cycle","type":"related"},{"name":"abnormal rRNA modification during vegetative growth","type":"exact"}],"termid":"FYPO:0005015"}


id: MONDO:0000324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial partial lipodystrophy (obsolete MONDO:0000324)","termid":"MONDO:0000324","xrefs":{"Monarch":{"xref_id":"0000324"}}}


id: MONDO:0002889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the orbit.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull cancer","termid":"MONDO:0002132"},{"relation_name":"is_a","term_name":"orbit neoplasm","termid":"MONDO:0024611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"orbital cancer","secondary_identifiers":["NCIT:C3290","DOID:4143","UMLS:C0153626","SCTID:127003006","ICD9:190.1","ICD9:239.89","MEDGEN:56314","EFO:0007408","NCIT:C3562"],"synonyms":[{"name":"cancer of orbit of skull","type":"exact"},{"name":"malignant neoplasm of orbit","type":"exact"},{"name":"malignant neoplasm of orbit of skull","type":"exact"},{"name":"malignant neoplasm of the orbit","type":"exact"},{"name":"malignant orbit neoplasm","type":"exact"},{"name":"malignant orbit of skull neoplasm","type":"exact"},{"name":"malignant orbit tumor","type":"exact"},{"name":"malignant orbit tumour","type":"exact"},{"name":"malignant orbital neoplasm","type":"exact"},{"name":"malignant orbital tumor","type":"exact"},{"name":"malignant orbital tumour","type":"exact"},{"name":"malignant tumor of orbit","type":"exact"},{"name":"malignant tumor of the orbit","type":"exact"},{"name":"malignant tumour of orbit","type":"exact"},{"name":"malignant tumour of the orbit","type":"exact"},{"name":"neoplasm of orbit proper","type":"broad"},{"name":"orbit cancer","type":"exact"},{"name":"orbit of skull cancer","type":"exact"},{"name":"orbital tumor","type":"broad"},{"name":"orbital tumour","type":"broad"}],"termid":"MONDO:0002889","xrefs":{"Monarch":{"xref_id":"0002889"}}}


id: GO:1904808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein oxidation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22719267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein oxidation","termid":"GO:1904806"},{"relation_name":"positively_regulates","term_name":"protein oxidation","termid":"GO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein oxidation","synonyms":[{"name":"activation of protein amino acid oxidation","type":"narrow"},{"name":"activation of protein oxidation","type":"narrow"},{"name":"positive regulation of protein amino acid oxidation","type":"exact"},{"name":"up regulation of protein amino acid oxidation","type":"exact"},{"name":"up regulation of protein oxidation","type":"exact"},{"name":"up-regulation of protein amino acid oxidation","type":"exact"},{"name":"up-regulation of protein oxidation","type":"exact"},{"name":"upregulation of protein amino acid oxidation","type":"exact"},{"name":"upregulation of protein oxidation","type":"exact"}],"termid":"GO:1904808"}


id: GO:0038006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a netrin signal and transmitting the signal from one side of the membrane to the other to contribute to the directed movement of a motile cell towards a higher concentration of netrin.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"netrin receptor activity","termid":"GO:0005042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"netrin receptor activity involved in chemoattraction","synonyms":[{"name":"attractive netrin receptor activity","type":"exact"},{"name":"netrin receptor activity involved in positive chemotaxis","type":"exact"}],"termid":"GO:0038006"}


id: GO:0010136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ureide, which is the organic form of nitrogen in nitrogen fixing and transporting plants with the release of ammonium.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"ureide metabolic process","termid":"GO:0010135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureide catabolic process","secondary_identifiers":["MetaCyc:URDEGR-PWY"],"synonyms":[{"name":"ureide breakdown","type":"exact"},{"name":"ureide catabolism","type":"exact"},{"name":"ureide degradation","type":"exact"}],"termid":"GO:0010136"}


id: PATO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elevation quality inhering in a bearer by virtue the bearer's being in a high position relative to another entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elevation","termid":"PATO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased elevation relative to","termid":"PATO:0002515"}


id: PBO:0059803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 29","termid":"PBO:0059803"}


id: MONDO:0000088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unusually early sexual maturity.","definition_xrefs":["NCIT:C79704"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare endocrine growth disease (obsolete MONDO:0019590)","termid":"MONDO:0019590"},{"relation_name":"is_a","term_name":"gonadal disorder","termid":"MONDO:0002259"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"precocious puberty","secondary_identifiers":["HP:0000826","ICD10CM:E30.1","MedDRA:10044701","NANDO:2100135","Orphanet:95708","MEDGEN:18752","UMLS:C0034013","ICD9:259.1","MESH:D011629","SCTID:400179000","MedDRA:10058084"],"synonyms":[{"name":"familial precocious puberty","type":"narrow"},{"name":"idiopathic sexual precocity","type":"narrow"},{"name":"pubertas praecox","type":"exact"},{"name":"sexual precocity","type":"exact"}],"termid":"MONDO:0000088","xrefs":{"Monarch":{"xref_id":"0000088"}}}


id: GO:0061956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The infiltration by sperm of the cumulus oophorus to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm.","definition_xrefs":["PMID:21380641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration of cumulus oophorus","synonyms":[{"name":"penetration of cumulus cells layer","type":"exact"},{"name":"penetration of cumulus mass","type":"exact"}],"termid":"GO:0061956"}


id: PBO:0047932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(12)(q13.1)","termid":"PBO:0047932"}


id: GO:0044563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant slowing of the activation kinetics of the activity of a voltage-gated potassium channel in the bitten/stung organism.","definition_xrefs":["GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in slowing of activation kinetics of voltage-gated potassium channel (obsolete GO:0044563)","synonyms":[{"name":"envenomation resulting in slowing of activation kinetics of voltage-gated potassium channel in other organism","type":"exact"},{"name":"voltage-dependence of activation shift (to the left)","type":"exact"}],"termid":"GO:0044563"}


id: PBO:0002494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sec7 domain protein, ARF GEF Sec72","termid":"PBO:0002494"}


id: PBO:0068983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 227, pseudogene","termid":"PBO:0068983"}


id: MONDO:0957875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal dominant","termid":"MONDO:0015362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal dominant 11","secondary_identifiers":["DOID:0081400","UMLS:C5882697","OMIM:620528","MEDGEN:1849676"],"termid":"MONDO:0957875","xrefs":{"Monarch":{"xref_id":"0957875"}}}


id: MONDO:0100158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of presentations resulting from biallelic protein-altering variation in CHRNG. Inactivation of the receptor during early development leads to prenatal hypo-akinesia; subsequent phenotypes are a consequence of this hypo-akinesia and are thought to be dependent upon timing and severity of the anomaly at the neuromuscular junction. A range of phenotypes varying in severity (including both lethal and non-lethal presentations) have been reported, but typically include joint contractures, pterygia, dysmorphic features, vertebral and thoracic anomalies, and additional variable abnormalities. There are no clear genotype-phenotype correlations between the lethal and non-lethal presentations of this spectrum; both inter- and intra-familial variability have been reported, with the same variants being observed in both lethal and non-lethal cases.","definition_xrefs":["PMID:16826520","PMID:22167768","PMID:16826531","PMID:30868735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple pterygium syndrome","termid":"MONDO:0017415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRNG-associated hypo-akinesia disorder of prenatal onset","termid":"MONDO:0100158","xrefs":{"Monarch":{"xref_id":"0100158"}}}


id: GO:0052054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of host protease activity, the catalysis of the hydrolysis of peptide bonds in a protein. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:dph","GOC:mtg_pamgo_17jul06","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host peptidase activity (obsolete GO:0052054)","synonyms":[{"name":"down regulation by symbiont of host protease activity","type":"narrow"},{"name":"down-regulation by symbiont of host protease activity","type":"narrow"},{"name":"downregulation by symbiont of host protease activity","type":"narrow"},{"name":"inhibition by symbiont of host protease activity","type":"narrow"},{"name":"inhibition of host protease activity","type":"narrow"},{"name":"negative regulation by symbiont of host protease activity","type":"narrow"}],"termid":"GO:0052054"}


id: GO:1901187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ephrin receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"ephrin receptor signaling pathway","termid":"GO:0048013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of ephrin receptor signaling pathway","synonyms":[{"name":"regulation of Eph receptor signaling pathway","type":"exact"},{"name":"regulation of Eph receptor signalling pathway","type":"exact"}],"termid":"GO:1901187"}


id: GO:0043508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of JUN kinase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAP kinase activity","termid":"GO:0043407"},{"relation_name":"is_a","term_name":"regulation of JUN kinase activity","termid":"GO:0043506"},{"relation_name":"is_a","term_name":"negative regulation of JNK cascade","termid":"GO:0046329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of JUN kinase activity","synonyms":[{"name":"down regulation of JNK activity","type":"exact"},{"name":"down-regulation of JNK activity","type":"exact"},{"name":"downregulation of JNK activity","type":"exact"},{"name":"inhibition of JNK activity","type":"narrow"},{"name":"negative regulation of JUNK activity","type":"exact"}],"termid":"GO:0043508"}


id: PBO:0091767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific HMG-box DNA-binding transcription factor Mc at silenced MAT3 locus","termid":"PBO:0091767"}


id: PBO:0076943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCF3 fusion partner","termid":"PBO:0076943"}


id: PBO:0082229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin, Ub-ligase adaptor for Rsp5p; regulates starvation- and substrate-induced Ub-dependent endocytosis of select plasma membrane localized amino acid transporters, recruiting Rsp5p to its targets; role in basal internalization and turnover of Ste2p, mating and zygote formation; recruits Rsp5p to Ste2p via its 2 PPXY motifs; inhibited by Npr1p-mediated phosphorylation, affecting cytosol and plasma membrane translocation; localization regulated by Rsp5p-dependent ubiquitination","termid":"PBO:0082229"}


id: MONDO:1010505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endocardial fibroelastosis that occurs in tiger.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial fibroelastosis, non-human animal","termid":"MONDO:1010027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocardial fibroelastosis, tiger","secondary_identifiers":["OMIA:001803-9694"],"termid":"MONDO:1010505","xrefs":{"Monarch":{"xref_id":"1010505"}}}


id: GO:0019003
data:
  {"annotated_genes":["SJAG_00807","SJAG_02004","SJAG_03581","SJAG_02374","SJAG_06588","SJAG_00514","SJAG_05210","SJAG_02390","SJAG_02605","SJAG_04464","SJAG_03002","SJAG_03089","SJAG_03246","SJAG_04771","SJAG_03453","SJAG_01025","SJAG_00858","SJAG_05184","SJAG_02027","SJAG_02819","SJAG_01415","SJAG_02063","SJAG_02529","SJAG_00143","SJAG_04982","SJAG_02486","SJAG_04615","SJAG_01030","SJAG_04837","SJAG_02493","SJAG_04491","SJAG_02248","SJAG_02833","SJAG_01576","SJAG_04653","SJAG_00064","SJAG_02422","SJAG_02471","SJAG_01659","SJAG_03705","SJAG_03142","SJAG_00216","SJAG_01309","SJAG_01367","SJAG_04666","SJAG_02645","SJAG_02160","SJAG_03600","SJAG_02368","SJAG_02307","SJAG_03488","SJAG_03704","SJAG_02831","SJAG_03678","SJAG_04010","SJAG_03361","SJAG_01699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72670,75534,92040,92770],"is_not":false,"summary":null,"term":"GO:0019003"},{"annotations":[72257,69026],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0005092"},{"annotations":[64814,62235,57456,74300,74275,75045,78577,79231,91537,66626,57309,94661,72419,72279,74543,69915,79856,98050,72753,80779,72703,77810,116802,68957,58111,91345,61302,69619,97637,63390,65352,99431,93116,108623,75750,92459,115837,78542,71906,57758,106732,56959,94387,57027,98294,78944,107313,70359],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0005085"},{"annotations":[76529],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0005093"},{"annotations":[111113,75682],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0005094"}]},"cv_name":"molecular_function","definition":"Binding to GDP, guanosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00143":null,"SJAG_00216":null,"SJAG_00514":null,"SJAG_00807":null,"SJAG_00858":null,"SJAG_01025":null,"SJAG_01030":null,"SJAG_01309":null,"SJAG_01367":null,"SJAG_01415":null,"SJAG_01576":null,"SJAG_01659":null,"SJAG_01699":null,"SJAG_02004":null,"SJAG_02027":null,"SJAG_02063":null,"SJAG_02160":null,"SJAG_02248":null,"SJAG_02307":null,"SJAG_02368":null,"SJAG_02374":null,"SJAG_02390":null,"SJAG_02422":null,"SJAG_02471":null,"SJAG_02486":null,"SJAG_02493":null,"SJAG_02529":null,"SJAG_02605":null,"SJAG_02645":null,"SJAG_02819":null,"SJAG_02831":null,"SJAG_02833":null,"SJAG_03002":null,"SJAG_03089":null,"SJAG_03142":null,"SJAG_03246":null,"SJAG_03361":null,"SJAG_03453":null,"SJAG_03488":null,"SJAG_03581":null,"SJAG_03600":null,"SJAG_03678":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_04010":null,"SJAG_04464":null,"SJAG_04491":null,"SJAG_04615":null,"SJAG_04653":null,"SJAG_04666":null,"SJAG_04771":null,"SJAG_04837":null,"SJAG_04982":null,"SJAG_05184":null,"SJAG_05210":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"GDP binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0019003","terms_by_termid":{"GO:0005085":null,"GO:0005092":null,"GO:0005093":null,"GO:0005094":null,"GO:0019003":null}}


id: PBO:0029327
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation_during_mitotic_S_phase","termid":"PBO:0029327"}


id: MONDO:0008132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leber plus disease","termid":"MONDO:0020478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"optic atrophy with demyelinating disease of CNS","secondary_identifiers":["DOID:0111756","MESH:C563496","GARD:15098","OMIM:165200","MEDGEN:322290","UMLS:C1833830"],"synonyms":[{"name":"optic atrophy with demyelinating disease of CNS","type":"exact"}],"termid":"MONDO:0008132","xrefs":{"Monarch":{"xref_id":"0008132"}}}


id: MONDO:0015119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bronchopulmonary tumor (obsolete MONDO:0015119)","secondary_identifiers":["Orphanet:101945"],"synonyms":[{"name":"rare bronchopulmonary tumor","type":"exact"}],"termid":"MONDO:0015119","xrefs":{"Monarch":{"xref_id":"0015119"}}}


id: MONDO:0016324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypertrophic cardiomyopathy (obsolete MONDO:0016324)","termid":"MONDO:0016324","xrefs":{"Monarch":{"xref_id":"0016324"}}}


id: PBO:0043543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin pseudogene 2","termid":"PBO:0043543"}


id: MONDO:0025062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A picornavirus infection producing symptoms similar to poliomyelitis in pigs.","definition_xrefs":["MESH:D004682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"enterovirus infectious disease, non-human animal","termid":"MONDO:0700210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalomyelitis, enzootic porcine","synonyms":[{"name":"Talfan disease","type":"related"},{"name":"Teschen disease","type":"related"},{"name":"disease, Talfan","type":"related"},{"name":"disease, Teschen","type":"related"},{"name":"enzootic porcine encephalomyelitis","type":"related"},{"name":"poliomyelitis, porcine","type":"related"},{"name":"porcine encephalomyelitis, enzootic","type":"related"},{"name":"porcine poliomyelitis","type":"related"}],"termid":"MONDO:0025062","xrefs":{"Monarch":{"xref_id":"0025062"}}}


id: MONDO:0011813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postaxial polydactyly type A","termid":"MONDO:0019673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, postaxial, type A3","secondary_identifiers":["GARD:18174","OMIM:607324","UMLS:C1846452","MEDGEN:337585","MESH:C564590"],"synonyms":[{"name":"PAPA3","type":"related"},{"name":"Papa3","type":"related"},{"name":"polydactyly, postaxial, type A3","type":"exact"},{"name":"postaxial polydactyly, type A3","type":"related"}],"termid":"MONDO:0011813","xrefs":{"Monarch":{"xref_id":"0011813"}}}


id: MONDO:1010494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, sheep","secondary_identifiers":["OMIA:001041-9940"],"termid":"MONDO:1010494","xrefs":{"Monarch":{"xref_id":"1010494"}}}


id: PBO:0027065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_transport_phenotype","termid":"PBO:0027065"}


id: MONDO:0009322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete halo nevi (obsolete MONDO:0009322)","secondary_identifiers":["OMIM:234300"],"termid":"MONDO:0009322","xrefs":{"Monarch":{"xref_id":"0009322"}}}


id: PBO:0077355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 95","termid":"PBO:0077355"}


id: PBO:0062431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 93 pseudogene","termid":"PBO:0062431"}


id: GO:0050065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + pyruvate = L-alanine + L-allysine.","definition_xrefs":["EC:2.6.1.71","RHEA:19393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"lysine-pyruvate 6-transaminase activity","secondary_identifiers":["KEGG_REACTION:R00453","MetaCyc:LYSINE--PYRUVATE-6-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"L-lysine:pyruvate aminotransferase activity","type":"related"},{"name":"Lys-AT","type":"related"},{"name":"lysine--pyruvate 6-aminotransferase activity","type":"exact"},{"name":"lysine-pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0050065"}


id: PBO:0078297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-2","termid":"PBO:0078297"}


id: PBO:0080713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing antisense to TP53","termid":"PBO:0080713"}


id: MONDO:0006325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from the structures of the eye or ocular adnexa.","definition_xrefs":["NCIT:C8562"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-cutaneous melanoma","termid":"MONDO:0006320"},{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"ocular melanoma","secondary_identifiers":["EFO:1000403","MEDGEN:107846","ONCOTREE:OM","UMLS:C0558356","DOID:1752"],"synonyms":[{"name":"OM","type":"related"},{"name":"eye melanoma","type":"exact"},{"name":"eye melanoma (disease)","type":"exact"},{"name":"eyeball of camera-type eye melanoma","type":"exact"},{"name":"eyeball of camera-type eye melanoma (disease)","type":"exact"},{"name":"melanoma (disease) of eyeball of camera-type eye","type":"exact"},{"name":"melanoma of eye","type":"exact"},{"name":"melanoma of the eye","type":"exact"},{"name":"ocular melanoma","type":"exact"}],"termid":"MONDO:0006325","xrefs":{"Monarch":{"xref_id":"0006325"}}}


id: PBO:0063242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 7","termid":"PBO:0063242"}


id: FYPO:0004067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a lower extent than normal.","definition_xrefs":["GO:0071619","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during mitotic cell cycle","type":"related"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 2 residues during vegetative growth","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0004067"}


id: PBO:0063935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PICALM interacting mitotic regulator","termid":"PBO:0063935"}


id: MONDO:0957008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"hereditary cerebral malformation","secondary_identifiers":["MEDGEN:1842500","Orphanet:269553","UMLS:C5679762","GARD:21004"],"synonyms":[{"name":"genetic cerebral malformation","type":"exact"}],"termid":"MONDO:0957008","xrefs":{"Monarch":{"xref_id":"0957008"}}}


id: PBO:0076327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptophysin like 1 pseudogene 1","termid":"PBO:0076327"}


id: PBO:0005047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug46","termid":"PBO:0005047"}


id: GO:0061516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a monocyte population by cell division.","definition_xrefs":["PMID:18467591","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte proliferation","termid":"GO:0061516"}


