# terms

id: PBO:0088628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Spb1","termid":"PBO:0088628"}


id: MONDO:0018013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary membranoproliferative glomerulonephritis","termid":"MONDO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"non-immunoglobulin-mediated membranoproliferative glomerulonephritis","secondary_identifiers":["GARD:17507","UMLS:C4087273","Orphanet:329918","MEDGEN:1672497"],"synonyms":[{"name":"C3 glomerulopathy","type":"exact"},{"name":"non-Ig-mediated MPGN","type":"exact"},{"name":"non-Ig-mediated membranoproliferative glomerulonephritis","type":"exact"},{"name":"non-immunoglobulin-mediated MPGN","type":"exact"}],"termid":"MONDO:0018013","xrefs":{"Monarch":{"xref_id":"0018013"}}}


id: PBO:0004927
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TeTra Spanning protein","termid":"PBO:0004927"}


id: PBO:0045192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 5","termid":"PBO:0045192"}


id: PBO:0040511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin receptor 1B","termid":"PBO:0040511"}


id: PBO:0041694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caldesmon 1","termid":"PBO:0041694"}


id: GO:0141156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with production of cyclic AMP (cAMP) by adenylate cyclase (either transmembrane or soluble), which activates protein kinase A, and ends with activation of downstream effectors such as the transcription factor CREB that further transmit the signal within the cell.","definition_xrefs":["PMID:23209152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cAMP/PKA signal transduction","synonyms":[{"name":"PKA signaling","type":"broad"},{"name":"cAMP signaling","type":"broad"},{"name":"cAMP/PKA signaling cassette","type":"exact"},{"name":"protein kinase A signaling","type":"broad"}],"termid":"GO:0141156"}


id: PBO:0087803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored plasma membrane protein with a conserved CYSTM module; predicted to be palmitoylated; has similarity to hydrophilins, which are involved in the adaptive response to hyperosmotic conditions; YBR016W has a paralog, YDL012C, that arose from the whole genome duplication","termid":"PBO:0087803"}


id: PBO:0053177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEMD1 antisense RNA 1","termid":"PBO:0053177"}


id: PBO:0008887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mi at silenced MAT3 locus","termid":"PBO:0008887"}


id: FYECO:0000212
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethanol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ethanol","termid":"FYECO:0000212"}


id: MONDO:0007363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital contractural arachnodactyly (CCA, Beals syndrome) is a connective tissue disorder characterized by multiple flexion contractures, arachnodactyly, severe kyphoscoliosis, abnormal pinnae and muscular hypoplasia.","definition_xrefs":["Orphanet:115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"arthrogryposis","termid":"MONDO:0008779"},{"relation_name":"is_a","term_name":"Marfan and Marfan-related disorder","termid":"MONDO:0017310"},{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital contractural arachnodactyly","secondary_identifiers":["GARD:5899","NANDO:2201026","NORD:844","icd11.foundation:1376425921","OMIM:121050","NCIT:C129865","MESH:C536211","SCTID:205821003","UMLS:C0220668","ICD9:759.89","MEDGEN:67391","DOID:0111595"],"synonyms":[{"name":"Beals syndrome","type":"exact"},{"name":"Beals-Hecht syndrome","type":"exact"},{"name":"CCA","type":"exact"},{"name":"CCA syndrome","type":"exact"},{"name":"DA9","type":"related"},{"name":"Ear anomalies-contractures-dysplasia of bone with kyphoscoliosis","type":"related"},{"name":"arachnodactyly, contractural Beals type","type":"related"},{"name":"arthrogryposis, distal, type 9","type":"related"},{"name":"contractural arachnodactyly, congenital","type":"related"},{"name":"contractures, multiple with arachnodactyly","type":"related"},{"name":"distal arthrogryposis type 9","type":"exact"}],"termid":"MONDO:0007363","xrefs":{"Monarch":{"xref_id":"0007363"}}}


id: PBO:0036482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine specific carbamoyl-phosphate synthase Arg4","termid":"PBO:0036482"}


id: GO:0010015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of roots are generated and organized. The root is the usually underground part of a seed plant body that originates from the hypocotyl, functions as an organ of absorption, aeration, and food storage or as a means of anchorage and support.","definition_xrefs":["ISBN:0877797099","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ morphogenesis","termid":"GO:1905392"},{"relation_name":"part_of","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root morphogenesis","termid":"GO:0010015"}


id: GO:0043041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Activation of an amino acid for incorporation into a peptide by a nonribosomal process.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid activation","termid":"GO:0043038"},{"relation_name":"part_of","term_name":"nonribosomal peptide biosynthetic process","termid":"GO:0019184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"amino acid activation for nonribosomal peptide biosynthetic process","synonyms":[{"name":"nonribosomal amino acid activation","type":"related"}],"termid":"GO:0043041"}


id: GO:0160012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2E)-butenoyl-L-lysyl-[histone] + NAD+ = 2''-O-(2E)-but-2-enoyl-ADP-D-ribose + L-lysyl-[histone] + nicotinamide.","definition_xrefs":["PMID:28497810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone decrotonylase activity","termid":"GO:0160009"},{"relation_name":"is_a","term_name":"NAD-dependent protein decrotonylase activity","termid":"GO:0160011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016746","GO:0016740","GO:0140096","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"NAD-dependent histone decrotonylase activity","termid":"GO:0160012"}


id: PBO:0086825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL050c is not an essential gene","termid":"PBO:0086825"}


id: PBO:0026906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_swollen_binucleate_multiseptate_cell_with_central_constriction","termid":"PBO:0026906"}


id: FYPO:0008112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which any process of U6 snRNP complex assembly is abnormal.","definition_xrefs":["PMID:37403782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal U6 snRNP assembly","termid":"FYPO:0008112"}


id: GO:0051256
data:
  {"annotated_genes":["SJAG_04841","SJAG_03073","SJAG_01215","SJAG_04745","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77543,95113,97613,99555,109166],"is_not":false,"summary":null,"term":"GO:0051256"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the aggregation, arrangement and bonding together of a set of components forms the spindle midzone.","definition_xrefs":["GOC:vw","PMID:24239120","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle midzone assembly","termid":"GO:0051255"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic spindle elongation","termid":"GO:0000022"},{"relation_name":"part_of","term_name":"mitotic spindle assembly","termid":"GO:0090307"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_01613":null,"SJAG_03073":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0000070","GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"mitotic spindle midzone assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitotic spindle midzone biogenesis","type":"exact"},{"name":"mitotic spindle midzone biosynthesis","type":"exact"},{"name":"mitotic spindle midzone formation","type":"exact"},{"name":"spindle midzone assembly involved in mitosis","type":"exact"},{"name":"spindle midzone biogenesis involved in mitosis","type":"exact"},{"name":"spindle midzone formation involved in mitosis","type":"exact"}],"termid":"GO:0051256","terms_by_termid":{"GO:0051256":null}}


id: MOD:00139
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N2-succinyl-L-tryptophan.","definition_xrefs":["RESID:AA0130","PubMed:11857757","PubMed:12175151","PubMed:8471040","Unimod:64#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2-succinyl-L-tryptophan","synonyms":[{"name":"(2S)-2-(3-carboxypropanoyl)amino-3-(1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"(2S)-2-amino-(6,7-dihydro-6,7-dioxo-1H-indole)-3-propanoic acid","type":"exact"},{"name":"MOD_RES N2-succinyltryptophan","type":"exact"},{"name":"N2-succinyl-L-tryptophan","type":"exact"},{"name":"Succinic anhydride labeling reagent light form (N-term)","type":"related"},{"name":"Succinyl","type":"related"}],"termid":"MOD:00139"}


id: FYPO:0002105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal shape but is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell shape","termid":"FYPO:0001125"},{"relation_name":"is_a","term_name":"normal vegetative cell shape","termid":"FYPO:0001125"},{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable vegetative cell with normal cell shape","synonyms":[{"name":"inviable cell with normal cell shape during vegetative growth","type":"exact"},{"name":"inviable vegetative cell with normal cell shape during mitotic cell cycle","type":"related"},{"name":"lethal; vegetative cell with normal cell shape","type":"exact"}],"termid":"FYPO:0002105"}


id: PBO:0013771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA m(1)G methyltransferase Trm10","termid":"PBO:0013771"}


id: MONDO:0007569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythema nodosum, familial","secondary_identifiers":["MESH:C535510","MEDGEN:377045","OMIM:132990","UMLS:C1851503"],"synonyms":[{"name":"erythema nodosum, familial","type":"exact"},{"name":"familial erythema nodosum","type":"related"}],"termid":"MONDO:0007569","xrefs":{"Monarch":{"xref_id":"0007569"}}}


id: GO:0033867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + Fas-activated serine/threonine protein = ADP + Fas-activated serine/threonine phosphoprotein.","definition_xrefs":["EC:2.7.11.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0004672","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"Fas-activated serine/threonine kinase activity","secondary_identifiers":["MetaCyc:2.7.11.8-RXN"],"synonyms":[{"name":"ATP:Fas-activated serine/threonine protein phosphotransferase activity","type":"related"},{"name":"FAST","type":"related"},{"name":"FASTK","type":"related"},{"name":"STK10","type":"related"}],"termid":"GO:0033867"}


id: GO:0050423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiamine + 2 O2 = thiamine acetic acid + 2 H2O2.","definition_xrefs":["MetaCyc:THIAMIN-OXIDASE-RXN","EC:1.1.3.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"thiamine oxidase activity","secondary_identifiers":["RHEA:21280"],"synonyms":[{"name":"thiamin dehydrogenase activity","type":"related"},{"name":"thiamin oxidase activity","type":"exact"},{"name":"thiamin:oxygen 5-oxidoreductase activity","type":"related"},{"name":"thiamine dehydrogenase activity","type":"related"},{"name":"thiamine:oxygen 5-oxidoreductase activity","type":"related"}],"termid":"GO:0050423"}


id: PBO:0069683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 960, pseudogene","termid":"PBO:0069683"}


id: GO:0061371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the heart with respect to the left and right halves of the organism.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of heart left/right asymmetry","synonyms":[{"name":"determination of cardiac left/right asymmetry","type":"exact"}],"termid":"GO:0061371"}


id: GO:0005691
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U6atac, the Lsm2-8 heptameric ring complex, as well as several proteins that are unique to the U6atac snRNP, most of which remain associated with the U6atac snRNA both while the U6atac snRNP is free or assembled into the U4atac/U6atac snRNP or into a series of spliceosomal complexes.","definition_xrefs":["GOC:krc","ISBN:0879695897","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U6atac snRNP","synonyms":[{"name":"snRNP U6atac","type":"exact"}],"termid":"GO:0005691"}


id: MONDO:0017917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, complex hereditary spastic paraplegia disorder characterized by adulthood-onset of slowly progressive, bilateral, mainly lower limb spasticity and distal weakness associated with lower limb pain, hyperreflexia, and reduced vibration sense. Axonal neuropathy is frequently observed on electromyography and nerve conduction examination.","definition_xrefs":["Orphanet:320360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"maternally-inherited spastic paraplegia","secondary_identifiers":["GARD:21433","UMLS:C4755299","MEDGEN:1663227"],"synonyms":[{"name":"MT-ATP6-related mitochondrial spastic paraplegia","type":"exact"},{"name":"maternally-inherited SPG","type":"exact"}],"termid":"MONDO:0017917","xrefs":{"Monarch":{"xref_id":"0017917"}}}


id: PBO:0082607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that binds and regulates Hsp90 family chaperones; plays a role in determining prion variants; important for pp60v-src activity in yeast; homologous to the mammalian p23 proteins, and like p23 can regulate telomerase activity; protein abundance increases in response to DNA replication stress","termid":"PBO:0082607"}


id: PBO:0068142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 449","termid":"PBO:0068142"}


id: MONDO:0043519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A traumatic injury involving interruption of tissue cohesiveness that results from exposure to caustic chemicals, extreme heat, extreme cold or excessive radiation.","definition_xrefs":["NCIT:C34441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"injury","termid":"MONDO:0021178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"burn","secondary_identifiers":["ICD10CM:T20-T25","MESH:D002056","SCTID:125666000"],"synonyms":[{"name":"Burn","type":"exact"},{"name":"Burn(s)","type":"exact"},{"name":"burn","type":"exact"}],"termid":"MONDO:0043519","xrefs":{"Monarch":{"xref_id":"0043519"}}}


id: PBO:0086858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA exonuclease; possibly involved in pre-rRNA processing and ribosome assembly","termid":"PBO:0086858"}


id: GO:2000010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to the cell surface.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell surface","termid":"GO:2000008"},{"relation_name":"positively_regulates","term_name":"protein localization to cell surface","termid":"GO:0034394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell surface","synonyms":[{"name":"positive regulation of protein localisation at cell surface","type":"exact"},{"name":"positive regulation of protein localization at cell surface","type":"exact"}],"termid":"GO:2000010"}


id: PBO:0029101
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sulfate_import","termid":"PBO:0029101"}


id: PBO:0031870
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in Fungi","termid":"PBO:0031870"}


id: FYPO:0003223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone acetylation during vegetative growth","termid":"FYPO:0003221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K9 acetylation during vegetative growth","synonyms":[{"name":"normal histone H3 K9 acetylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9 acetylation during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003223"}


id: GO:0047697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-beta-alanopine + H2O + NAD+ = beta-alanine + H+ + NADH + pyruvate.","definition_xrefs":["RHEA:21684","EC:1.5.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"beta-alanopine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00906","MetaCyc:BETA-ALANOPINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"N-(D-1-carboxyethyl)-beta-alanine:NAD+ oxidoreductase (beta-alanine-forming)","type":"related"},{"name":"b-alanopine dehydrogenase activity","type":"exact"}],"termid":"GO:0047697"}


id: GO:0044264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving polysaccharides, polymers of more than 10 monosaccharide residues joined by glycosidic linkages, as carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular polysaccharide metabolic process (obsolete GO:0044264)","synonyms":[{"name":"cellular glycan metabolic process","type":"exact"},{"name":"cellular glycan metabolism","type":"exact"},{"name":"cellular polysaccharide metabolism","type":"exact"}],"termid":"GO:0044264"}


id: GO:1902262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in blood vessel morphogenesis.","definition_xrefs":["PMID:16163358","GOC:mtg_apoptosis","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in blood vessel morphogenesis","synonyms":[{"name":"apoptosis involved in patterning of blood vessels","type":"narrow"},{"name":"apoptotic cell death involved in patterning of blood vessels","type":"exact"},{"name":"apoptotic program involved in patterning of blood vessels","type":"narrow"},{"name":"apoptotic programmed cell death involved in patterning of blood vessels","type":"exact"},{"name":"programmed cell death by apoptosis involved in patterning of blood vessels","type":"exact"},{"name":"signaling (initiator) caspase activity involved in patterning of blood vessels","type":"related"},{"name":"type I programmed cell death involved in patterning of blood vessels","type":"narrow"}],"termid":"GO:1902262"}


id: GO:0015189
data:
  {"annotated_genes":["SJAG_02029","SJAG_03256","SJAG_03400","SJAG_04637","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79470,97686,100682,103118,110337],"is_not":false,"summary":null,"term":"GO:0015189"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-lysine from one side of a membrane to the other. L-lysine is 2,6-diaminohexanoic acid.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-lysine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005293"],"synonyms":[{"name":"L-lysine permease","type":"related"},{"name":"histidine/arginine/lysine/ornithine porter activity","type":"narrow"},{"name":"lysine permease activity","type":"related"}],"termid":"GO:0015189","terms_by_termid":{"GO:0015189":null}}


id: PBO:0044271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 11","termid":"PBO:0044271"}


id: PBO:0046901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 24 member B","termid":"PBO:0046901"}


id: GO:0017027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane receptor protein serine/threonine kinase receptor-associated protein activity (obsolete GO:0017027)","synonyms":[{"name":"transmembrane receptor protein serine/threonine kinase receptor-associated protein activity","type":"exact"}],"termid":"GO:0017027"}


id: MONDO:0006020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Zollinger-Ellison syndrome (obsolete MONDO:0006020)","synonyms":[{"name":"obsolete Zollinger-Ellison syndrome (disease)","type":"exact"}],"termid":"MONDO:0006020","xrefs":{"Monarch":{"xref_id":"0006020"}}}


id: FYPO:0006951
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of N(alpha),N(alpha)-dimethyl-L-histidines measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular N(alpha),N(alpha)-dimethyl-L-histidine level","synonyms":[{"name":"increased N(alpha),N(alpha)-dimethyl-L-histidine accumulation","type":"related"},{"name":"increased cellular N(alpha),N(alpha)-dimethyl-L-histidine level during mitotic cell cycle","type":"related"},{"name":"increased cellular N(alpha),N(alpha)-dimethyl-L-histidine level during vegetative growth","type":"exact"},{"name":"increased cellular dimethyl-histidine level","type":"exact"},{"name":"increased cellular dimethylhistidine level","type":"exact"}],"termid":"FYPO:0006951"}


id: PBO:0042932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell growth regulator with EF-hand domain 1","termid":"PBO:0042932"}


id: PBO:0066274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member H, pseudogene","termid":"PBO:0066274"}


id: PBO:0034315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_neural_circuit_with","termid":"PBO:0034315"}


id: PBO:0041391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 60","termid":"PBO:0041391"}


id: PBO:0042590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 3","termid":"PBO:0042590"}


id: PBO:0062550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily P member 1 pseudogene","termid":"PBO:0062550"}


id: MONDO:1012407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acral mutilation syndrome, non-human animal","termid":"MONDO:1011884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acral mutilation syndrome, dog","secondary_identifiers":["OMIA:001514-9615"],"termid":"MONDO:1012407","xrefs":{"Monarch":{"xref_id":"1012407"}}}


id: PBO:0057822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3142","termid":"PBO:0057822"}


id: FYPO:0003205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a primary septum that is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased septum thickness","termid":"FYPO:0006900"},{"relation_name":"output_of","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000032","FYPO:0000631"],"is_obsolete":false,"name":"decreased primary cell septum thickness","synonyms":[{"name":"decreased primary cell septum thickness during mitotic cell cycle","type":"related"},{"name":"decreased primary cell septum thickness during vegetative growth","type":"exact"},{"name":"decreased primary septum thickness","type":"exact"},{"name":"reduced primary cell septum thickness","type":"exact"},{"name":"thin primary septum","type":"exact"}],"termid":"FYPO:0003205"}


id: GO:0004535
data:
  {"annotated_genes":["SJAG_02540","SJAG_04407","SJAG_04519","SJAG_00966","SJAG_01836"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74654,77704,79303,108093,116906],"is_not":false,"summary":null,"term":"GO:0004535"}]},"cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage of poly(A) to 5'-AMP.","definition_xrefs":["EC:3.1.13.4","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-RNA exonuclease activity","termid":"GO:0000175"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00966":null,"SJAG_01836":null,"SJAG_02540":null,"SJAG_04407":null,"SJAG_04519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0004527","GO:0016788","GO:0016787","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"poly(A)-specific ribonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-429955","Reactome:R-HSA-9822311","Reactome:R-HSA-429992","Reactome:R-HSA-9822335","Reactome:R-HSA-430021","MetaCyc:3.1.13.4-RXN"],"synonyms":[{"name":"2',3'-exoribonuclease activity","type":"related"},{"name":"3'-exoribonuclease activity","type":"related"},{"name":"poly(A)-specific RNase activity","type":"exact"}],"termid":"GO:0004535","terms_by_termid":{"GO:0004535":null}}


id: GO:1900323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltotetraose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of maltotetraose transport","termid":"GO:1900321"},{"relation_name":"positively_regulates","term_name":"maltotetraose transport","termid":"GO:2001099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maltotetraose transport","synonyms":[{"name":"activation of maltotetraose transport","type":"narrow"},{"name":"up regulation of maltotetraose transport","type":"exact"},{"name":"up-regulation of maltotetraose transport","type":"exact"},{"name":"upregulation of maltotetraose transport","type":"exact"}],"termid":"GO:1900323"}


id: GO:0043527
data:
  {"annotated_genes":["SJAG_02637","SJAG_04890","SJAG_04181","SJAG_04848","SJAG_02386","SJAG_04680"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75266,74400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031515"},{"annotations":[104450,75781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043528"},{"annotations":[116015,119288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106143"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex involved in the methylation of specific nucleotides in tRNA.","definition_xrefs":["GOC:jl","PMID:9851972","PMID:24904644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null,"SJAG_04181":null,"SJAG_04680":null,"SJAG_04848":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tRNA methyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043527","terms_by_termid":{"GO:0031515":null,"GO:0043528":null,"GO:0106143":null}}


id: GO:1905222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which an atrioventricular canal is generated and organized.","definition_xrefs":["GOC:TermGenie","PMID:19703439","GO_REF:0000083","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"atrioventricular canal development","termid":"GO:0036302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular canal morphogenesis","synonyms":[{"name":"AV canal morphogenesis","type":"exact"},{"name":"AVC morphogenesis","type":"exact"},{"name":"atrial canal morphogenesis","type":"exact"},{"name":"atrio-ventricular canal morphogenesis","type":"exact"},{"name":"canalis atrioventricularis morphogenesis","type":"related"},{"name":"ependymal canal morphogenesis","type":"related"}],"termid":"GO:1905222"}


id: PBO:0046546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group FRD member 3","termid":"PBO:0046546"}


id: GO:0000492
data:
  {"annotated_genes":["SJAG_05223","SJAG_01567","SJAG_00752","SJAG_05679","SJAG_03036","SJAG_04355"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68283,73154,76653,80059,98269,104366],"is_not":false,"summary":null,"term":"GO:0000492"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and a box C/D snoRNA to form a box C/D small nucleolar ribonucleoprotein (snoRNP) complex.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small nucleolar ribonucleoprotein complex assembly","termid":"GO:0000491"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00752":null,"SJAG_01567":null,"SJAG_03036":null,"SJAG_04355":null,"SJAG_05223":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"box C/D snoRNP assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"box C/D small nucleolar ribonucleoprotein complex assembly","type":"exact"}],"termid":"GO:0000492","terms_by_termid":{"GO:0000492":null}}


id: PBO:0109194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitofissin Atg44","termid":"PBO:0109194"}


id: PBO:0058330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4704","termid":"PBO:0058330"}


id: PBO:0077382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 123","termid":"PBO:0077382"}


id: GO:0050643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-deacetylbaccatin III + acetyl-CoA = baccatin III + CoA.","definition_xrefs":["EC:2.3.1.167","RHEA:20137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"10-deacetylbaccatin III 10-O-acetyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.167-RXN","KEGG_REACTION:R06311"],"synonyms":[{"name":"acetyl-CoA:taxan-10beta-ol O-acetyltransferase","type":"broad"}],"termid":"GO:0050643"}


id: GO:0061790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial attachment of a dense core granule membrane to the plasma membrane.","definition_xrefs":["GOC:PARL","PMID:26575293","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"},{"relation_name":"part_of","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0140056","GO:0006810"],"is_obsolete":false,"name":"dense core granule docking","termid":"GO:0061790"}


id: GO:0098929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of spine apparatus membrane (obsolete GO:0098929)","termid":"GO:0098929"}


id: GO:0047282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-L-dihydrostreptose + streptidine 6-phosphate = O-(1->4)-alpha-L-dihydrostreptosyl-streptidine 6-phosphate + dTDP + H+.","definition_xrefs":["EC:2.4.2.27","RHEA:24392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"dTDP-dihydrostreptose-streptidine-6-phosphate dihydrostreptosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.2.27-RXN","KEGG_REACTION:R04222"],"synonyms":[{"name":"dTDP-L-dihydrostreptose:streptidine-6-phosphate dihydrostreptosyltransferase activity","type":"related"},{"name":"dTDPdihydrostreptose-streptidine-6-phosphate dihydrostreptosyltransferase activity","type":"related"},{"name":"thymidine diphosphodihydrostreptose-streptidine 6-phosphate dihydrostreptosyltransferase activity","type":"related"}],"termid":"GO:0047282"}


id: GO:0009151
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a purine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide metabolic process","termid":"GO:0009394"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine deoxyribonucleotide metabolism","type":"exact"}],"termid":"GO:0009151","terms_by_termid":{"GO:0035863":null}}


id: MONDO:0020157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic palpebral coloboma (obsolete MONDO:0020157)","secondary_identifiers":["Orphanet:98566"],"termid":"MONDO:0020157","xrefs":{"Monarch":{"xref_id":"0020157"}}}


id: GO:0048804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of female genitalia are generated and organized from the genital disc.","definition_xrefs":["GOC:sensu","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived genitalia morphogenesis","termid":"GO:0048805"},{"relation_name":"is_a","term_name":"female genitalia morphogenesis","termid":"GO:0048807"},{"relation_name":"part_of","term_name":"imaginal disc-derived female genitalia development","termid":"GO:0007486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived female genitalia morphogenesis","synonyms":[{"name":"female genital morphogenesis","type":"broad"}],"termid":"GO:0048804"}


id: PBO:0053090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 2B","termid":"PBO:0053090"}


id: GO:1905272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of proton-transporting ATP synthase activity, rotational mechanism.","definition_xrefs":["PMID:21106936","GO_REF:0000059","GOC:als","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of proton-transporting ATP synthase activity, rotational mechanism (obsolete GO:1905272)","synonyms":[{"name":"down regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"down regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"down regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"down regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"down regulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"down-regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"down-regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"down-regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"down-regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"down-regulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"downregulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"downregulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"downregulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"downregulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"downregulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"inhibition of H+-transporting ATP synthase activity","type":"narrow"},{"name":"inhibition of hydrogen ion translocating F-type ATPase activity","type":"narrow"},{"name":"inhibition of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"narrow"},{"name":"inhibition of hydrogen ion transporting two-sector ATPase activity","type":"narrow"},{"name":"inhibition of proton-transporting ATP synthase activity, rotational mechanism","type":"narrow"},{"name":"negative regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"negative regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"negative regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"negative regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:1905272"}


id: GO:0000987
data:
  {"annotated_genes":["SJAG_02138","SJAG_04813","SJAG_00266","SJAG_03473","SJAG_04092","SJAG_00802","SJAG_02956","SJAG_02326","SJAG_01062","SJAG_02938","SJAG_00861","SJAG_06599","SJAG_04036","SJAG_04191","SJAG_00210","SJAG_05337","SJAG_00304","SJAG_05288","SJAG_04839","SJAG_04421","SJAG_02406","SJAG_00792","SJAG_05153","SJAG_04009","SJAG_02052","SJAG_03918","SJAG_01930","SJAG_04584","SJAG_04388","SJAG_05006","SJAG_02472","SJAG_01725","SJAG_04381","SJAG_05247","SJAG_01583","SJAG_00693","SJAG_02709","SJAG_04855","SJAG_03622","SJAG_04249","SJAG_00421","SJAG_02218","SJAG_01441","SJAG_00124","SJAG_03538","SJAG_06576","SJAG_03183","SJAG_03735","SJAG_05339","SJAG_02311","SJAG_03911","SJAG_05343","SJAG_01694","SJAG_03346","SJAG_02048","SJAG_02252","SJAG_01307","SJAG_01243","SJAG_00698","SJAG_03143","SJAG_03354","SJAG_03120","SJAG_02569","SJAG_00386","SJAG_02730","SJAG_01343","SJAG_00664","SJAG_04712","SJAG_03879","SJAG_00979","SJAG_00037","SJAG_02149","SJAG_03484","SJAG_02810","SJAG_00926","SJAG_01157","SJAG_01740","SJAG_01916","SJAG_03519","SJAG_03388","SJAG_00987","SJAG_04749","SJAG_03241","SJAG_00163"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75405,96377,79853,72254,76257,104769,89808,111197,104273,116772,96911,90439,109501,112193,80790,92810,108948,79891,69682,72471,74433,77979,116910,80281,79968,75261,88799,89383,102366,72438,70463,88375,95082,97862,101807,102599,111180,111372,97864,97863,73088,103871,76147,92256,97700,95065,103014,93648,97259,107046,96027,106436,99828,97389,74736,111213,73425,98745,89135,97861,75203,74498,112233,118656,76659,100449,107889,80134,88744,113992,78735,72837,73753,115138,78412,74203,75924,97860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000978"},{"annotations":[107373,109123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"},{"annotations":[88530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000992"},{"annotations":[70165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"},{"annotations":[70166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001003"},{"annotations":[77894,95917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001006"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site, located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by some RNA polymerase. Cis-regulatory sites are often referred to as a sequence motifs, enhancers, or silencers.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":84,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00386":null,"SJAG_00421":null,"SJAG_00664":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01157":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01441":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01916":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02810":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03120":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03354":null,"SJAG_03388":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04249":null,"SJAG_04381":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04584":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05337":null,"SJAG_05339":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0000976","GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cis-regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001159","GO:0000986","GO:0001150","GO:0001158","GO:0035326"],"synonyms":[{"name":"bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase enhancer sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase upstream activating sequence (UAS) sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type cis-regulatory region sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"cis-regulatory region binding","type":"related"},{"name":"core promoter proximal region DNA binding","type":"narrow"},{"name":"core promoter proximal region sequence-specific DNA binding","type":"narrow"},{"name":"enhancer binding","type":"related"},{"name":"enhancer sequence-specific DNA binding","type":"related"},{"name":"eubacterial-type RNA polymerase regulatory transcription factor sequence-specific DNA binding","type":"narrow"},{"name":"promoter proximal region sequence-specific DNA binding","type":"narrow"},{"name":"proximal promoter sequence-specific DNA binding","type":"narrow"}],"termid":"GO:0000987","terms_by_termid":{"GO:0000978":null,"GO:0000992":null,"GO:0001002":null,"GO:0001003":null,"GO:0001006":null,"GO:0044377":null}}


id: MONDO:0009160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Ehlers-Danlos syndrome, type 6 (obsolete MONDO:0009160)","termid":"MONDO:0009160","xrefs":{"Monarch":{"xref_id":"0009160"}}}


id: PBO:0053939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1239","termid":"PBO:0053939"}


id: GO:0046640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alpha-beta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"regulates","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alpha-beta T cell proliferation","synonyms":[{"name":"regulation of alpha-beta T lymphocyte proliferation","type":"exact"},{"name":"regulation of alpha-beta T-cell proliferation","type":"exact"},{"name":"regulation of alpha-beta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046640"}


id: FYPO:0007501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly, arrangement of constituent parts, or disassembly of the horsetail-astral microtubule array is abnormal.","definition_xrefs":["PomBase:mah","GO:0032118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during meiotic cell cycle","termid":"FYPO:0007113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abnormal horsetail-astral microtubule organization","synonyms":[{"name":"abnormal horsetail-astral microtubule array organization","type":"exact"},{"name":"abnormal horsetail-astral microtubule organisation","type":"exact"},{"name":"abnormal horsetail-astral microtubule organization and biogenesis","type":"related"}],"termid":"FYPO:0007501"}


id: GO:0035393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 9 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 9 production","synonyms":[{"name":"CXCL9 production","type":"exact"},{"name":"MIG production","type":"exact"},{"name":"Monokine induced by gamma interferon production","type":"exact"}],"termid":"GO:0035393"}


id: FYPO:0000029
data:
  {"alleles_by_uniquename":{"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119704,119702,119703],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"FYPO:0000671"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome segregation is abnormal. Chromosome segregation begins with the alignment of chromosomes at the metaphase plate, includes sister chromatid separation, and ends when chromosomes have completed movement to the spindle poles.","definition_xrefs":["GO:0007059","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":3,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromosome segregation","references_by_uniquename":{"PMID:24184107":null},"secondary_identifiers":["FYPO:0000226"],"single_locus_annotated_genes":["SJAG_03449"],"single_locus_genotype_uniquenames":["man1delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"centromere function defective","type":"related"},{"name":"chromosome missegregation","type":"related"},{"name":"chromosome segregation defects","type":"exact"},{"name":"chromosome segregation: abnormal","type":"related"}],"termid":"FYPO:0000029","terms_by_termid":{"FYPO:0000671":null}}


id: PBO:0034023
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_approved_date","termid":"PBO:0034023"}


id: PBO:0012524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_formation_of","termid":"PBO:0012524"}


id: GO:0031146
data:
  {"annotated_genes":["SJAG_03651","SJAG_00192","SJAG_03219","SJAG_01068","SJAG_00651","SJAG_02162","SJAG_01022","SJAG_00341","SJAG_04573","SJAG_02651","SJAG_01617","SJAG_02822","SJAG_02591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72224,74558,80619,94689,95875,98098,98781,102425,104909,105190,107539,109393,117150],"is_not":false,"summary":null,"term":"GO:0031146"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by an SCF (Skp1/Cul1/F-box protein) complex, and mediated by the proteasome.","definition_xrefs":["PMID:15380083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00341":null,"SJAG_00651":null,"SJAG_01022":null,"SJAG_01068":null,"SJAG_01617":null,"SJAG_02162":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03651":null,"SJAG_04573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SCF-dependent proteasomal ubiquitin-dependent protein breakdown","type":"exact"},{"name":"SCF-dependent proteasomal ubiquitin-dependent protein catabolism","type":"exact"},{"name":"SCF-dependent proteasomal ubiquitin-dependent protein degradation","type":"exact"}],"termid":"GO:0031146","terms_by_termid":{"GO:0031146":null}}


id: MONDO:0016994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephalic osteodysplastic primordial dwarfism (MOPD) types 1 and 3 are characterized by intrauterine and postnatal growth retardation, microcephaly, facial dysmorphism, skeletal dysplasia, low-birth weight and brain anomalies. Although MOPD types 1 and 3 were originally described as two separate entities on the basis of radiological criteria (notably small differences in pelvic and long bone structure), later reports confirmed that the two forms represent different modes of expression of the same syndrome.","definition_xrefs":["Orphanet:2636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephalic osteodysplastic primordial dwarfism types I and III","secondary_identifiers":["UMLS:C4319565","GARD:5120","MEDGEN:1380769","SCTID:725461009"],"synonyms":[{"name":"MOPD 1","type":"related"},{"name":"MOPD types I and III","type":"exact"},{"name":"Taybi-Linder syndrome","type":"narrow"},{"name":"brachymelic primordial dwarfism","type":"related"},{"name":"cephaloskeletal dysplasia","type":"related"},{"name":"low-birth-weight dwarfism with skeletal dysplasia","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism type 1","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism types 1 and 3","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism, Taybi-Linder type","type":"exact"},{"name":"osteodysplastic primordial dwarfism type I","type":"related"},{"name":"primordial microcephalic dwarfism, Crachami type","type":"exact"}],"termid":"MONDO:0016994","xrefs":{"Monarch":{"xref_id":"0016994"}}}


id: MONDO:0030266
data:
  {"annotated_genes":["SJAG_00399"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86865],"is_not":false,"summary":null,"term":"MONDO:0030266"}]},"cv_name":"mondo","definition":"An autosomal recessive immunologic disorder with variable manifestations. One patient with infantile-onset of chronic cytomegalovirus (CMV) infection associated with severely decreased NK cells has been reported. Another family with 3 affected fetuses showing restrictive cardiomyopathy and hypoplasia of the spleen and thymus has also been reported.","definition_xrefs":["OMIM:619313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 80 with or without congenital cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1786417","UMLS:C5543344"],"synonyms":[{"name":"IMD80","type":"exact"},{"name":"MCM10 deficiency","type":"exact"},{"name":"immunodeficiency 80 with or without cardiomyopathy","type":"exact"},{"name":"immunodeficiency 80 with or without congenital cardiomyopathy","type":"exact"},{"name":"immunodeficiency with or without congenital cardiomyopathy","type":"exact"}],"termid":"MONDO:0030266","terms_by_termid":{"MONDO:0030266":null},"xrefs":{"Monarch":{"xref_id":"0030266"}}}


id: PBO:0039668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit sigma 1","termid":"PBO:0039668"}


id: GO:0071350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-15 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-15","termid":"GO:0070672"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-15","synonyms":[{"name":"cellular response to IL-15","type":"exact"}],"termid":"GO:0071350"}


id: GO:0036209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9beta-pimara-7,15-diene + 3 O2 + 3 reduced [NADPH-hemoprotein reductase] = 9beta-pimara-7,15-dien-19-oate + 4 H+ + 4 H2O + 3 oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["RHEA:31951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"9beta-pimara-7,15-diene oxidase activity","secondary_identifiers":["GO:0102609","EC:1.14.14.111","KEGG_REACTION:R09865","MetaCyc:RXN-15437"],"synonyms":[{"name":"9-beta-stemod-13(17)-ene oxidase activity","type":"related"}],"termid":"GO:0036209"}


id: GO:0001715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process that results in a cell becoming becomes capable of differentiating autonomously into an ectoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"ectodermal cell fate commitment","termid":"GO:0001712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal cell fate specification","synonyms":[{"name":"ectoderm cell fate specification","type":"exact"}],"termid":"GO:0001715"}


id: PBO:0080806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 2","termid":"PBO:0080806"}


id: PBO:0085904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may have a role in lipid metabolism, based on localization to lipid droplets; predicted to be palmitoylated","termid":"PBO:0085904"}


id: GO:0034599
data:
  {"annotated_genes":["SJAG_04953","SJAG_01292","SJAG_02592","SJAG_02249","SJAG_04403","SJAG_00668","SJAG_02485","SJAG_02858","SJAG_00419","SJAG_02945","SJAG_04036","SJAG_03330","SJAG_04311","SJAG_03303","SJAG_02515","SJAG_00365","SJAG_02573","SJAG_01216","SJAG_03924","SJAG_02135","SJAG_03653","SJAG_04788","SJAG_02044","SJAG_00027","SJAG_03903","SJAG_06621","SJAG_01084","SJAG_01199","SJAG_00984","SJAG_02433","SJAG_06611","SJAG_02495","SJAG_00996","SJAG_03414","SJAG_01734","SJAG_04632","SJAG_03896","SJAG_01162","SJAG_05181","SJAG_04399","SJAG_04125","SJAG_03166","SJAG_04823","SJAG_01855","SJAG_00141","SJAG_03828","SJAG_06622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64162,67478,68555,70658,73674,74040,75216,75539,76204,77182,77379,77914,79426,88903,90434,90533,91229,92499,93908,95897,96320,97947,102173,108111,109241,109242,109243,109244,109245,109246,109247,114771],"is_not":false,"summary":null,"term":"GO:0034599"},{"annotations":[109144,95531,117669,118591,105365,100322],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[89323,61027,65296,93480,89745,99597,74668,69223,58084],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxidative stress","termid":"GO:0006979"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00141":null,"SJAG_00365":null,"SJAG_00419":null,"SJAG_00668":null,"SJAG_00984":null,"SJAG_00996":null,"SJAG_01084":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_01734":null,"SJAG_01855":null,"SJAG_02044":null,"SJAG_02135":null,"SJAG_02249":null,"SJAG_02433":null,"SJAG_02485":null,"SJAG_02495":null,"SJAG_02515":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02858":null,"SJAG_02945":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03330":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03828":null,"SJAG_03896":null,"SJAG_03903":null,"SJAG_03924":null,"SJAG_04036":null,"SJAG_04125":null,"SJAG_04311":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_06611":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxidative stress","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-9707564","Reactome:R-HSA-3299685"],"synonyms":[{"name":"adaptive response to oxidative stress","type":"narrow"}],"termid":"GO:0034599","terms_by_termid":{"GO:0019430":null,"GO:0034599":null,"GO:0061692":null}}


id: GO:0099106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulates the activity of a channel via direct interaction with it. A channel catalyzes energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel regulator activity","termid":"GO:0016247"},{"relation_name":"regulates","term_name":"monoatomic ion channel activity","termid":"GO:0005216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0022857"},{"rel_name":"regulates","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0098772","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ion channel regulator activity","termid":"GO:0099106"}


id: MONDO:0016646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant optic atrophy and peripheral neuropathy (ADOAPN) is a form of autosomal dominant optic atrophy (ADOA), characterized by progressive and isolated visual loss in the first decade of life, decreased reflexes in the lower limbs and a mild cerebellar stance.","definition_xrefs":["Orphanet:250932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy","termid":"MONDO:0020250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0000426","MONDO:0005328","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"autosomal dominant optic atrophy and peripheral neuropathy","secondary_identifiers":["UMLS:C4273829","GARD:20686","MEDGEN:895207"],"termid":"MONDO:0016646","xrefs":{"Monarch":{"xref_id":"0016646"}}}


id: PBO:0079602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 F (putative)","termid":"PBO:0079602"}


id: PBO:0083001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-2-hydroxyglutarate dehydrogenase, and minor D-lactate dehydrogenase; mitochondrial matrix protein that oxidizes D-2-hydroxyglutarate (D-2HG), an oncometabolite, to alpha-ketoglutarate with a minor role in lactate catabolism; located in the mitochondrial matrix","termid":"PBO:0083001"}


id: PBO:0026722
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_oligomerization","termid":"PBO:0026722"}


id: GO:0018068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of protein tyrosine to L-2',4',5'-topaquinone, characteristic of the active site of copper amine oxidases.","definition_xrefs":["RESID:AA0147"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-2',4',5'-topaquinone biosynthetic process from peptidyl-tyrosine (obsolete GO:0018068)","synonyms":[{"name":"peptidyl-L-2',4',5'-topaquinone anabolism from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-2',4',5'-topaquinone formation from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-2',4',5'-topaquinone synthesis from peptidyl-tyrosine","type":"exact"}],"termid":"GO:0018068"}


id: PBO:0044517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled associated activator of morphogenesis 1","termid":"PBO:0044517"}


id: PBO:0030029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_adenylyl_cyclase_activity","termid":"PBO:0030029"}


id: MONDO:0044332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"Huntington disease-like syndrome","termid":"MONDO:0015548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"childhood-onset benign chorea with striatal involvement","secondary_identifiers":["MEDGEN:1798886","Orphanet:494541","GARD:17906","UMLS:C5567463"],"termid":"MONDO:0044332","xrefs":{"Monarch":{"xref_id":"0044332"}}}


id: MONDO:0975761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 126, susceptibility to","secondary_identifiers":["OMIM:620931"],"termid":"MONDO:0975761","xrefs":{"Monarch":{"xref_id":"0975761"}}}


id: MONDO:0032580
data:
  {"annotated_genes":["SJAG_00471"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86739],"is_not":false,"summary":null,"term":"MONDO:0032580"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648294","OMIM:618176","UMLS:C4748545","DOID:0080392","GARD:16299"],"synonyms":[{"name":"NEPHROTIC SYNDROME, TYPE 17","type":"related"},{"name":"NPHS17","type":"related"}],"termid":"MONDO:0032580","terms_by_termid":{"MONDO:0032580":null},"xrefs":{"Monarch":{"xref_id":"0032580"}}}


id: PBO:0065800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1A, member RAS oncogene family","termid":"PBO:0065800"}


id: PBO:0017089
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae COX18","termid":"PBO:0017089"}


id: GO:0097629
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94959],"is_not":false,"summary":null,"term":"GO:0097629"}]},"cv_name":"cellular_component","definition":"The component of the omegasome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf","PMID:18725538","PMID:24591649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"omegasome membrane","termid":"GO:1903349"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of omegasome membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to omegasome membrane","type":"exact"},{"name":"omegasome peripheral membrane","type":"related"}],"termid":"GO:0097629","terms_by_termid":{"GO:0097629":null}}


id: GO:0045033
data:
  {"annotated_genes":["SJAG_04315"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107005],"is_not":false,"summary":null,"term":"GO:0045033"}]},"cv_name":"biological_process","definition":"The acquisition of peroxisomes by daughter cells from the mother cell after replication. In Saccharomyces cerevisiae, the number of peroxisomes cells is fairly constant; a subset of the organelles are targeted and segregated to the bud in a highly ordered, vectorial process. Efficient segregation of peroxisomes from mother to bud is dependent on the actin cytoskeleton, and active movement of peroxisomes along actin filaments is driven by the class V myosin motor protein, Myo2p.","definition_xrefs":["PMID:11733545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome organization","termid":"GO:0007031"},{"relation_name":"is_a","term_name":"organelle inheritance","termid":"GO:0048308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007031","GO:0008150"],"is_obsolete":false,"name":"peroxisome inheritance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045033","terms_by_termid":{"GO:0045033":null}}


id: PBO:0040447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 10A (putative)","termid":"PBO:0040447"}


id: PBO:0088899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fen1 family nuclease, XP-G family","termid":"PBO:0088899"}


id: MONDO:0700166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sexually transmitted tumor arising from histiocytes and occurring in dogs.","definition_xrefs":["NCIT:C162473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venereal tumors, veterinary","termid":"MONDO:0025478"},{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine transmissible venereal tumor","termid":"MONDO:0700166","xrefs":{"Monarch":{"xref_id":"0700166"}}}


id: MONDO:0030930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without early-onset generalized epilepsy","secondary_identifiers":["OMIM:619157","GARD:18539","UMLS:C5436914","MEDGEN:1737097"],"synonyms":[{"name":"NEDEGE","type":"exact"}],"termid":"MONDO:0030930","xrefs":{"Monarch":{"xref_id":"0030930"}}}


id: GO:0110132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a CRISPR-cas system.","definition_xrefs":["PMID:30190307","PMID:30190308"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of CRISPR-cas system (obsolete GO:0110132)","termid":"GO:0110132"}


id: PBO:0063630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 8","termid":"PBO:0063630"}


id: FYPO:0003280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ion starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to copper ion starvation during vegetative growth","termid":"FYPO:0003197"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to copper ion starvation","termid":"FYPO:0006209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion starvation during vegetative growth","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion starvation during vegetative growth","type":"related"},{"name":"decreased RNA level during cellular response to copper ion depletion during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion deprivation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during copper ion starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to copper ion starvation during vegetative growth","type":"narrow"},{"name":"decreased transcript level during cellular response to copper ion starvation during vegetative growth","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0003280"}


id: GO:0002123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior induced by frustration and directed against an available target.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"irritable aggressive behavior","synonyms":[{"name":"irritable aggression","type":"exact"}],"termid":"GO:0002123"}


id: GO:0032969
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains MAPKSP1 (MP1, Map2k1ip1) and ROBLD3 (p14, Mapbpip), is anchored to late endosomes, and is involved in selective activation of the ERK1 in ERK/MAPK signaling.","definition_xrefs":["PMID:16227978","PMID:17496910","PMID:15263099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"late endosome membrane","termid":"GO:0031902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005768","GO:0032991","GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"endosomal scaffold complex","synonyms":[{"name":"MP1-p14 scaffolding complex","type":"exact"},{"name":"endosomal adaptor complex","type":"exact"}],"termid":"GO:0032969"}


id: PBO:0002859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin I light chain Cam2","termid":"PBO:0002859"}


id: PBO:0040878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 3","termid":"PBO:0040878"}


id: PBO:0055637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3076","termid":"PBO:0055637"}


id: MONDO:0023538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypopituitarism","termid":"MONDO:0005152"},{"relation_name":"is_a","term_name":"microphthalmia","termid":"MONDO:0021129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Kaplowitz-Bodurtha syndrome","secondary_identifiers":["MEDGEN:444037","UMLS:C2931361","MESH:C536893"],"synonyms":[{"name":"congenital hypopituitarism and microphthalmia","type":"related"},{"name":"hypopituitarism microphthalmia","type":"related"}],"termid":"MONDO:0023538","xrefs":{"Monarch":{"xref_id":"0023538"}}}


id: PBO:0004222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-end-recognizing protein Ubr1","termid":"PBO:0004222"}


id: MONDO:0000631
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"}]},"cv_name":"mondo","definition":"A neoplasm that arises from the bone or articular cartilage and does not invade adjacent tissues or metastasize to other anatomic sites.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign connective and soft tissue neoplasm","termid":"MONDO:0000654"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"is_obsolete":false,"name":"bone benign neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0684516","NCIT:C4880","SCTID:92027006","MEDGEN:146337","DOID:0060094","ICD9:213.9"],"synonyms":[{"name":"benign bone neoplasm","type":"exact"},{"name":"benign bone tumor","type":"exact"},{"name":"benign bone tumour","type":"exact"},{"name":"benign neoplasm of bone","type":"exact"},{"name":"benign neoplasm of the bone","type":"exact"},{"name":"benign osseous neoplasm","type":"exact"},{"name":"benign osseous tumor","type":"exact"},{"name":"benign osseous tumour","type":"exact"},{"name":"benign tumor of bone","type":"exact"},{"name":"benign tumor of the bone","type":"exact"},{"name":"benign tumour of bone","type":"exact"},{"name":"benign tumour of the bone","type":"exact"},{"name":"bone tissue benign neoplasm","type":"exact"}],"termid":"MONDO:0000631","terms_by_termid":{"MONDO:0010621":null},"xrefs":{"Monarch":{"xref_id":"0000631"}}}


id: PBO:0031232
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_mitotic_metaphase/anaphase_transition","termid":"PBO:0031232"}


id: GO:0140454
data:
  {"annotated_genes":["SJAG_00436"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105318],"is_not":false,"summary":null,"term":"GO:0140454"}]},"cv_name":"biological_process","definition":"The reversible aggregation of misfolded proteins and chaperones, formed to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00436":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"protein aggregate center assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PAC assembly","type":"broad"},{"name":"protein aggregate center formation","type":"exact"},{"name":"protein aggregate centre assembly","type":"exact"}],"termid":"GO:0140454","terms_by_termid":{"GO:0140454":null}}


id: MONDO:0008295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of porphyria cutanea tarda that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyria cutanea tarda","termid":"MONDO:0015104"},{"relation_name":"is_a","term_name":"acquired porphyria","termid":"MONDO:1030015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"sporadic porphyria cutanea tarda","secondary_identifiers":["OMIM:176090","Orphanet:443057","GARD:17749","icd11.foundation:1813031784","SCTID:402479002","UMLS:C1867968","MESH:C566768","MEDGEN:357391"],"synonyms":[{"name":"PCT, 'sporadic' type","type":"related"},{"name":"PCT, type 1","type":"related"},{"name":"acquired porphyria cutanea tarda","type":"exact"},{"name":"porphyria cutanea tarda type I","type":"exact"},{"name":"porphyria cutanea tarda, type 1","type":"related"},{"name":"porphyria cutanea tarda, type I","type":"related"}],"termid":"MONDO:0008295","xrefs":{"Monarch":{"xref_id":"0008295"}}}


id: GO:0001061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a bacterial-type specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial-type RNA polymerase activity (obsolete GO:0001061)","termid":"GO:0001061"}


id: GO:2000641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of early endosome to late endosome transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"early endosome to late endosome transport","termid":"GO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of early endosome to late endosome transport","termid":"GO:2000641"}


id: PBO:0031904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Tor1","termid":"PBO:0031904"}


id: PR:Q10449
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug157 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 157 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.16c","synonyms":[{"name":"Spom972h-mug157","type":"exact"}],"termid":"PR:Q10449"}


id: PBO:0050911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 2","termid":"PBO:0050911"}


id: MONDO:0022007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition resulting from the excessive retention of water with sodium depletion.","definition_xrefs":["MESH:D014869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"water intoxication","secondary_identifiers":["UMLS:C0043049","SCTID:71785001","MEDGEN:53061"],"synonyms":[{"name":"WATER INTOX","type":"related"},{"name":"Water Intoxication","type":"related"},{"name":"Water intoxication","type":"related"},{"name":"Water intoxication syndrome","type":"related"},{"name":"water intoxication syndrome","type":"exact"}],"termid":"MONDO:0022007","xrefs":{"Monarch":{"xref_id":"0022007"}}}


id: MONDO:0001099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Single or multiple, milk-containing nodules in the breast. It is caused by obstruction of the breast ducts during lactation. Needle aspiration of the milk is the treatment of choice.","definition_xrefs":["NCIT:C3515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast cyst","termid":"MONDO:0001011"},{"relation_name":"is_a","term_name":"lactation disease","termid":"MONDO:0045019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactocele","secondary_identifiers":["MESH:C535998","SCTID:42385006","UMLS:C0152243","DOID:10686","icd11.foundation:1987155556","ICD9:611.5","MEDGEN:101829"],"synonyms":[{"name":"Galactocoele","type":"related"},{"name":"galactocele","type":"exact"},{"name":"lacteal cyst","type":"related"}],"termid":"MONDO:0001099","xrefs":{"Monarch":{"xref_id":"0001099"}}}


id: GO:0042900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arabinose, a pentose monosaccharide that occurs in both D and L configurations, and as a polymer, from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transporter activity","termid":"GO:0015146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"arabinose transmembrane transporter activity","termid":"GO:0042900"}


id: PBO:0085975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; previously annotated as two separate ORFs, YDR474C and YDR475C, which were merged as a result of corrections to the systematic reference sequence; JIP4 has a paralog, YOR019W, that arose from the whole genome duplication","termid":"PBO:0085975"}


id: MONDO:0012425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Fuchs' endothelial dystrophy","termid":"MONDO:0005321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal dystrophy, fuchs endothelial, 2","secondary_identifiers":["GARD:18217","MESH:C535479","OMIM:610158","UMLS:C1857800","MEDGEN:347552"],"synonyms":[{"name":"FECD2","type":"exact"},{"name":"Fcd1 locus","type":"related"},{"name":"corneal dystrophy, Fuchs endothelial, 2","type":"related"},{"name":"corneal dystrophy, Fuchs endothelial, late-onset","type":"related"}],"termid":"MONDO:0012425","xrefs":{"Monarch":{"xref_id":"0012425"}}}


id: GO:0010508
data:
  {"annotated_genes":["SJAG_04249","SJAG_05000","SJAG_02433","SJAG_04496","SJAG_04435","SJAG_04502","SJAG_02765","SJAG_03851","SJAG_05289","SJAG_00704","SJAG_05346","SJAG_01184","SJAG_01716","SJAG_00824","SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73933,73953,80290,99201,99767,109981,112150,114885],"is_not":false,"summary":null,"term":"GO:0010508"},{"annotations":[108965,108875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[97948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[69289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903599"},{"annotations":[75784,106578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[89863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"positively_regulates","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00704":null,"SJAG_00824":null,"SJAG_01184":null,"SJAG_01716":null,"SJAG_02433":null,"SJAG_02765":null,"SJAG_03851":null,"SJAG_04249":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_05000":null,"SJAG_05289":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"positive regulation of autophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0010508","terms_by_termid":{"GO:0010508":null,"GO:0016239":null,"GO:0140501":null,"GO:1901098":null,"GO:1903599":null,"GO:2000786":null}}


id: PBO:0065122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCZ divergent transcript","termid":"PBO:0065122"}


id: MONDO:0005987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with nematodes of the genus toxascaris.","definition_xrefs":["MESH:D017227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ascaridida infectious disease","termid":"MONDO:0005656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxascariasis","secondary_identifiers":["DOID:3107","UMLS:C0040522","MEDGEN:21221"],"synonyms":[{"name":"Toxascaris caused disease or disorder","type":"exact"},{"name":"Toxascaris disease or disorder","type":"exact"},{"name":"Toxascaris infectious disease","type":"exact"}],"termid":"MONDO:0005987","xrefs":{"Monarch":{"xref_id":"0005987"}}}


id: GO:0070845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of misfolded polyubiquitinated proteins in a cell, including the movement of proteins between specific compartments or structures within a cell.","definition_xrefs":["GOC:mah","PMID:14675537","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"misfolded protein transport","termid":"GO:0070843"},{"relation_name":"is_a","term_name":"polyubiquitinated protein transport","termid":"GO:0070844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"polyubiquitinated misfolded protein transport","synonyms":[{"name":"misfolded polyubiquitinated protein transport","type":"related"},{"name":"polyubiquitylated misfolded protein transport","type":"exact"}],"termid":"GO:0070845"}


id: PR:P87308
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsb5 gene.","definition_xrefs":["UniProtKB:P87308","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein lsb5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.07","synonyms":[{"name":"Spom972h-lsb5","type":"exact"}],"termid":"PR:P87308"}


id: MONDO:0100442
data:
  {"annotated_genes":["SJAG_01526"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010723"}]},"cv_name":"mondo","definition":"A retinopathy caused by variants in the X-linked gene, RP2.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01526":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"RP2-related retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"RP2","type":"narrow"},{"name":"RP2 retinitis pigmentosa","type":"narrow"},{"name":"RP2 retinopathy","type":"exact"},{"name":"retinitis pigmentosa 2","type":"narrow"},{"name":"retinitis pigmentosa caused by mutation in RP2","type":"narrow"},{"name":"retinitis pigmentosa type 2","type":"narrow"}],"termid":"MONDO:0100442","terms_by_termid":{"MONDO:0010723":null},"xrefs":{"Monarch":{"xref_id":"0100442"}}}


id: PBO:0042974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD1 divergent transcript","termid":"PBO:0042974"}


id: PBO:0012025
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae Ypd1","termid":"PBO:0012025"}


id: PBO:0087321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Snf1p-related nutrient-responsive protein kinase; overexpression increases sodium and lithium tolerance, whereas gene disruption increases cation and low pH sensitivity and impairs potassium uptake, suggesting a role in regulation of Trk1p and/or Trk2p transporters; HAL5 has a paralog, KKQ8, that arose from the whole genome duplication","termid":"PBO:0087321"}


id: GO:0044320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leptin stimulus. Leptin is a hormone manufactured primarily in the adipocytes of white adipose tissue, and the level of circulating leptin is directly proportional to the total amount of fat in the body. It plays a key role in regulating energy intake and energy expenditure, including appetite and metabolism.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to leptin","termid":"GO:0044321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leptin stimulus","termid":"GO:0044320"}


id: PBO:0088501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial acylpyruvase Oaa1","termid":"PBO:0088501"}


id: MOD:00997
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclohexyl ester","synonyms":[{"name":"OcHex","type":"exact"}],"termid":"MOD:00997"}


id: PBO:0050581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 5","termid":"PBO:0050581"}


id: PBO:0046011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 6","termid":"PBO:0046011"}


id: PBO:0072406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 11","termid":"PBO:0072406"}


id: GO:0016678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a heme group acts as a hydrogen or electron donor and reduces an acceptor other than a nitrogenous group or oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on heme group of donors, other acceptors (obsolete GO:0016678)","synonyms":[{"name":"oxidoreductase activity, acting on haem group of donors, other acceptors","type":"exact"},{"name":"oxidoreductase activity, acting on heme group of donors, other acceptors","type":"exact"}],"termid":"GO:0016678"}


id: PR:O14170
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pop2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat-containing protein pop2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.03","synonyms":[{"name":"Spom972h-pop2","type":"exact"},{"name":"proteolysis factor sud1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14170"}


id: FYPO:0004266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cortical microtubule cytoskeleton does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"},{"relation_name":"is_a","term_name":"abnormal protein localization to cortical microtubule cytoskeleton","termid":"FYPO:0004265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to cortical microtubule cytoskeleton","synonyms":[{"name":"abolished protein localisation to cortical microtubule cytoskeleton","type":"exact"},{"name":"protein absent from cortical microtubule cytoskeleton","type":"related"},{"name":"protein localization to cortical microtubule cytoskeleton abolished","type":"exact"}],"termid":"FYPO:0004266"}


id: PBO:0041436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 40","termid":"PBO:0041436"}


id: PBO:0004667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L34 (predicted)","termid":"PBO:0004667"}


id: GO:2000975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pro-B cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphoid progenitor cell differentiation","termid":"GO:1905458"},{"relation_name":"is_a","term_name":"regulation of pro-B cell differentiation","termid":"GO:2000973"},{"relation_name":"positively_regulates","term_name":"pro-B cell differentiation","termid":"GO:0002328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pro-B cell differentiation","synonyms":[{"name":"positive regulation of pro-B cell development","type":"related"},{"name":"positive regulation of pro-B lymphocyte differentiation","type":"exact"}],"termid":"GO:2000975"}


id: FYPO:0004859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more polysaccharides measured in the cell wall is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"},{"relation_name":"is_a","term_name":"altered level of substance in cell wall during vegetative growth","termid":"FYPO:0002627"},{"relation_name":"output_of","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002946","FYPO:0001985"],"is_obsolete":false,"name":"increased cell wall polysaccharide level","synonyms":[{"name":"increased cell wall polysaccharide accumulation","type":"related"},{"name":"increased cell wall polysaccharide level during mitotic cell cycle","type":"related"},{"name":"increased cell wall polysaccharide level during vegetative growth","type":"exact"}],"termid":"FYPO:0004859"}


id: MONDO:0025459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral disease of cloven-hoofed animals caused by morbillivirus. It may be acute, subacute, or chronic with the major lesions characterized by inflammation and ulceration of the entire digestive tract. The disease was declared successfully eradicated worldwide in 2010.","definition_xrefs":["MESH:D012301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rinderpest","synonyms":[{"name":"cattle plague","type":"related"},{"name":"plague, cattle","type":"related"}],"termid":"MONDO:0025459","xrefs":{"Monarch":{"xref_id":"0025459"}}}


id: PBO:0078039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 29","termid":"PBO:0078039"}


id: PBO:0051846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 2","termid":"PBO:0051846"}


id: PBO:0049192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor AMPA type subunit 3","termid":"PBO:0049192"}


id: GO:0004519
data:
  {"annotated_genes":["SJAG_04091","SJAG_04198","SJAG_03994","SJAG_05212","SJAG_02621","SJAG_02156","SJAG_02556","SJAG_04006","SJAG_MIT07","SJAG_02828","SJAG_03952","SJAG_06613","SJAG_04519","SJAG_02790","SJAG_01551","SJAG_04527","SJAG_01569","SJAG_01936","SJAG_01260","SJAG_04885","SJAG_MIT05","SJAG_02374","SJAG_00400","SJAG_05373","SJAG_03328","SJAG_04019","SJAG_00306","SJAG_00623","SJAG_01581","SJAG_01832","SJAG_00754","SJAG_02708","SJAG_02553","SJAG_03796","SJAG_04907","SJAG_00772","SJAG_03962","SJAG_02547","SJAG_02039","SJAG_01884","SJAG_01476","SJAG_01173","SJAG_01262","SJAG_00955","SJAG_04587","SJAG_01076","SJAG_04916","SJAG_00997","SJAG_01471","SJAG_01623","SJAG_04435","SJAG_01433","SJAG_01979","SJAG_01948","SJAG_03689","SJAG_MIT06","SJAG_02031","SJAG_01648","SJAG_03675","SJAG_03234","SJAG_04582","SJAG_01044","SJAG_02298","SJAG_06022","SJAG_04752","SJAG_05237","SJAG_04183","SJAG_03425","SJAG_02594","SJAG_03539","SJAG_01463"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61075,64847,67725,74177,88473,100615,119340,119348,119349],"is_not":false,"summary":null,"term":"GO:0004519"},{"annotations":[119069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990599"},{"annotations":[74779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[80697,70472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042781"},{"annotations":[104475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990601"},{"annotations":[75956,73170,78701,66694,71661,74907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"},{"annotations":[59693,74774,78905,79536,95075,101493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008821"},{"annotations":[106266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033892"},{"annotations":[101495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106332"},{"annotations":[117112],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140656"},{"annotations":[118401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070551"},{"annotations":[89177],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060698"},{"annotations":[92042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990174"},{"annotations":[68100,73961,77047,60593,59956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004525"},{"annotations":[115613,118896,105985,71577,115700,95050,104876,105094,105984,97121,96832,113798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000171"},{"annotations":[102375,63765,115614,95051,68706,60630,97122,71581,104877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004526"},{"annotations":[70338,72748,116633,72239,63856,77176,109314,79781,107778,66934,113229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004521"},{"annotations":[76775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016891"},{"annotations":[78109],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061632"},{"annotations":[77323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008419"},{"annotations":[80582,88645,103263,76323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004523"},{"annotations":[79764,72236,110344,111137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000014"},{"annotations":[117982,79334,73276,71680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease 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id: MONDO:0000805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a snail food product.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete snail allergy (obsolete MONDO:0000805)","secondary_identifiers":["DOID:0060530"],"synonyms":[{"name":"allergy of snail food product","type":"exact"},{"name":"snail food product allergic disease","type":"exact"}],"termid":"MONDO:0000805","xrefs":{"Monarch":{"xref_id":"0000805"}}}


id: PATO:0000636
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally ventral structures.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventralized","termid":"PATO:0000636"}


id: GO:0046565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydroshikimate = 3,4-dihydroxybenzoate + H2O. 3,4-dihydroxybenzoate is also known as protocatechuate.","definition_xrefs":["EC:4.2.1.118","MetaCyc:DHSHIKIMATE-DEHYDRO-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"3-dehydroshikimate dehydratase activity","secondary_identifiers":["RHEA:24848"],"termid":"GO:0046565"}


id: PBO:0034736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs120","termid":"PBO:0034736"}


id: GO:0031721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a hemoglobin alpha chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemoglobin binding","termid":"GO:0030492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"hemoglobin alpha binding","termid":"GO:0031721"}


id: MONDO:1010618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly, non-human animal","termid":"MONDO:1010066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, sheep","secondary_identifiers":["OMIA:000645-9940"],"termid":"MONDO:1010618","xrefs":{"Monarch":{"xref_id":"1010618"}}}


id: GO:0051610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of serotonin into a cell, typically presynaptic neurons or glial cells. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin transport","termid":"GO:0006837"},{"relation_name":"is_a","term_name":"neurotransmitter reuptake","termid":"GO:0098810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"serotonin uptake","synonyms":[{"name":"5-HT uptake","type":"exact"},{"name":"5-hydroxytryptamine uptake","type":"exact"},{"name":"5HT uptake","type":"exact"},{"name":"serotonin import","type":"exact"}],"termid":"GO:0051610"}


id: GO:0019767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an immunoglobulin of the IgE isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","ISBN:0781735149","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin receptor activity","termid":"GO:0019763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"IgE receptor activity","termid":"GO:0019767"}


id: GO:0006751
data:
  {"annotated_genes":["SJAG_01612","SJAG_00903","SJAG_03316","SJAG_04858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74019,76984,78922,102576],"is_not":false,"summary":null,"term":"GO:0006751"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione metabolic process","termid":"GO:0006749"},{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00903":null,"SJAG_01612":null,"SJAG_03316":null,"SJAG_04858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"glutathione catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glutathione breakdown","type":"exact"},{"name":"glutathione catabolism","type":"exact"},{"name":"glutathione degradation","type":"exact"}],"termid":"GO:0006751","terms_by_termid":{"GO:0006751":null}}


id: SO:0001964
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified guanine DNA base feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_guanine","termid":"SO:0001964"}


id: FYPO:0001195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased polysaccharide level during vegetative growth","termid":"FYPO:0001080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased galactomannan level","synonyms":[{"name":"decreased cellular galactomannan level","type":"exact"},{"name":"decreased galactomannan accumulation","type":"related"},{"name":"decreased galactomannan level during mitotic cell cycle","type":"related"},{"name":"decreased galactomannan level during vegetative growth","type":"exact"},{"name":"reduced galactomannan level","type":"exact"}],"termid":"FYPO:0001195"}


id: GO:1901944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving miltiradiene.","definition_xrefs":["PMID:22027823","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"miltiradiene metabolic process","synonyms":[{"name":"miltiradiene metabolism","type":"exact"}],"termid":"GO:1901944"}


id: MONDO:0012652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of limb-girdle muscular dystrophy most often characterized by an adult onset (but ranging from 11 to 51 years) of mainly proximal lower limb weakness, with difficulties standing on tiptoes being one of the initial signs. Proximal upper limb and distal lower limb weakness is also common as well as atrophy of the quadriceps (most commonly), biceps brachii, and lower leg muscles. However, calf hypertrophy has also been reported in some cases. LGMD2L progresses slowly, with most patients remaining ambulatory until late adulthood.","definition_xrefs":["Orphanet:206549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2L","secondary_identifiers":["MESH:C566968","GARD:12536","UMLS:C1969785","OMIM:611307","DOID:0110284","MEDGEN:370102"],"synonyms":[{"name":"ANO5 autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"LGMD2L","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in ANO5","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2L","type":"related"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 12","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2L","type":"exact"}],"termid":"MONDO:0012652","xrefs":{"Monarch":{"xref_id":"0012652"}}}


id: PBO:0074246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 66 member 2","termid":"PBO:0074246"}


id: MONDO:0044200
data:
  {"annotated_genes":["SJAG_00677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014168"}]},"cv_name":"mondo","definition":"T-B+ severe combined immunodeficiency (SCID) is a group of rare monogenic primary immunodeficiency disorders characterized by a lack of functional peripheral T lymphocytes with presence of B lymphocytes, resulting in early-onset severe respiratory viral, bacterial or fungal infections, diarrhea and failure to thrive.","definition_xrefs":["Orphanet:317416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-B+ severe combined immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21405","UMLS:C5679894","MEDGEN:1842847"],"synonyms":[{"name":"T-B+ SCID","type":"exact"},{"name":"T-cell negative B-cell positive SCID","type":"exact"}],"termid":"MONDO:0044200","terms_by_termid":{"MONDO:0014168":null},"xrefs":{"Monarch":{"xref_id":"0044200"}}}


id: GO:1990644
data:
  {"annotated_genes":["SJAG_00207","SJAG_00646"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88349,111995],"is_not":false,"summary":null,"term":"GO:1990644"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that attaches the spindle microtubules to the kinetochore.","definition_xrefs":["PMID:20723757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"microtubule site clamp","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990644","terms_by_termid":{"GO:1990644":null}}


id: PBO:0034816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D family exosome subunit Cti1","termid":"PBO:0034816"}


id: GO:1902083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-cysteine S-nitrosylation.","definition_xrefs":["PMID:19198614","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of peptidyl-cysteine S-nitrosylation","termid":"GO:2000169"},{"relation_name":"negatively_regulates","term_name":"peptidyl-cysteine S-nitrosylation","termid":"GO:0018119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-cysteine S-nitrosylation","synonyms":[{"name":"down regulation of S-nitrosylation","type":"exact"},{"name":"down regulation of peptidyl-cysteine S-nitrosylation","type":"exact"},{"name":"down regulation of protein S-nitrosylation","type":"exact"},{"name":"down-regulation of S-nitrosylation","type":"exact"},{"name":"down-regulation of peptidyl-cysteine S-nitrosylation","type":"exact"},{"name":"down-regulation of protein S-nitrosylation","type":"exact"},{"name":"downregulation of S-nitrosylation","type":"exact"},{"name":"downregulation of peptidyl-cysteine S-nitrosylation","type":"exact"},{"name":"downregulation of protein S-nitrosylation","type":"exact"},{"name":"inhibition of S-nitrosylation","type":"exact"},{"name":"inhibition of peptidyl-cysteine S-nitrosylation","type":"narrow"},{"name":"inhibition of protein S-nitrosylation","type":"exact"},{"name":"negative regulation of S-nitrosylation","type":"exact"},{"name":"negative regulation of protein S-nitrosylation","type":"exact"}],"termid":"GO:1902083"}


id: GO:1904119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of otic vesicle morphogenesis.","definition_xrefs":["GOC:TermGenie","PMID:25677106","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of animal organ morphogenesis","termid":"GO:0110111"},{"relation_name":"is_a","term_name":"regulation of otic vesicle morphogenesis","termid":"GO:1904118"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"otic vesicle morphogenesis","termid":"GO:0071600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of otic vesicle morphogenesis","synonyms":[{"name":"down regulation of otic vesicle morphogenesis","type":"exact"},{"name":"down-regulation of otic vesicle morphogenesis","type":"exact"},{"name":"downregulation of otic vesicle morphogenesis","type":"exact"},{"name":"inhibition of otic vesicle morphogenesis","type":"narrow"}],"termid":"GO:1904119"}


id: PBO:0072079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 9","termid":"PBO:0072079"}


id: PBO:0050931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 10","termid":"PBO:0050931"}


id: MONDO:0011740
data:
  {"annotated_genes":["SJAG_00260","SJAG_03920","SJAG_02398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85752,85753,85754],"is_not":false,"summary":null,"term":"MONDO:0011740"}]},"cv_name":"mondo","definition":"Carney-Stratakis syndrome is a recently described familial syndrome characterized by gastrointestinal stromal tumors (GIST) and paragangliomas, often at multiple sites.","definition_xrefs":["Orphanet:97286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple polyglandular tumor","termid":"MONDO:0015079"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"Carney-Stratakis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C564650","GARD:10643","DOID:0080533","NCIT:C94831","MEDGEN:376098","OMIM:606864","SCTID:722377004","UMLS:C1847319"],"synonyms":[{"name":"Carney dyad","type":"exact"},{"name":"Carney-Stratakis dyad","type":"exact"},{"name":"Carney-Stratakis dyad of paraganglioma and gastric stromal sarcoma","type":"related"},{"name":"Carney-Stratakis syndrome","type":"exact"},{"name":"gist-paraganglioma dyad","type":"exact"},{"name":"paraganglioma and gastric stromal sarcoma","type":"exact"},{"name":"paraganglioma and gastrointestinal stromal tumor","type":"related"},{"name":"paraganglioma and gastrointestinal stromal tumour","type":"related"},{"name":"paraganglioma and gist","type":"related"}],"termid":"MONDO:0011740","terms_by_termid":{"MONDO:0011740":null},"xrefs":{"Monarch":{"xref_id":"0011740"}}}


id: GO:0060696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of phospholipid catabolism, the chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"regulates","term_name":"phospholipid catabolic process","termid":"GO:0009395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phospholipid catabolic process","termid":"GO:0060696"}


id: GO:0019680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methylmalonyl-CoA, the L-enantiomer of 2-carboxypropanoyl-CoA.","definition_xrefs":["GOC:ai","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methylmalonyl-CoA metabolic process","termid":"GO:0046491"},{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0055086"],"is_obsolete":false,"name":"L-methylmalonyl-CoA biosynthetic process","secondary_identifiers":["MetaCyc:PWY0-43"],"synonyms":[{"name":"L-methylmalonyl-CoA anabolism","type":"exact"},{"name":"L-methylmalonyl-CoA biosynthesis","type":"exact"},{"name":"L-methylmalonyl-CoA formation","type":"exact"},{"name":"L-methylmalonyl-CoA synthesis","type":"exact"}],"termid":"GO:0019680"}


id: PBO:0018283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med21","termid":"PBO:0018283"}


id: GO:0046207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of trypanothione (N1,N6,-bis(glutathionyl)spermidine), an essential redox intermediate in intracellular thiol redox regulation which also plays a role in protecting against oxidative stress.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trypanothione metabolic process","termid":"GO:0046206"},{"relation_name":"is_a","term_name":"glutathione derivative catabolic process","termid":"GO:1901686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"trypanothione catabolic process","synonyms":[{"name":"trypanothione breakdown","type":"exact"},{"name":"trypanothione catabolism","type":"exact"},{"name":"trypanothione degradation","type":"exact"}],"termid":"GO:0046207"}


id: MONDO:0014755
data:
  {"annotated_genes":["SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86257],"is_not":false,"summary":null,"term":"MONDO:0014755"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple benign circumferential skin creases on limbs","termid":"MONDO:0007990"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02045":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin creases, congenital symmetric circumferential, 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112243","GARD:16156","OMIM:616734","MEDGEN:902880","UMLS:C4225225"],"synonyms":[{"name":"CSCSC2","type":"exact"},{"name":"MAPRE2 multiple benign circumferential skin creases on limbs","type":"exact"},{"name":"multiple benign circumferential skin creases on limbs caused by mutation in MAPRE2","type":"exact"},{"name":"skin creases, congenital symmetric circumferential, 2","type":"exact"},{"name":"skin creases, congenital symmetric circumferential, 2; CSCSC2","type":"exact"},{"name":"skin creases, congenital symmetric circumferential, type 2","type":"exact"},{"name":"symmetric circumferential skin creases, congenital, 2","type":"exact"}],"termid":"MONDO:0014755","terms_by_termid":{"MONDO:0014755":null},"xrefs":{"Monarch":{"xref_id":"0014755"}}}


id: PBO:0069820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1106, pseudogene","termid":"PBO:0069820"}


id: GO:0042122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"alginic acid metabolic process","termid":"GO:0042120"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"alginic acid catabolic process","synonyms":[{"name":"alginate catabolic process","type":"exact"},{"name":"alginate catabolism","type":"exact"},{"name":"alginic acid breakdown","type":"exact"},{"name":"alginic acid catabolism","type":"exact"},{"name":"alginic acid degradation","type":"exact"}],"termid":"GO:0042122"}


id: PBO:0036270
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae DBR1","termid":"PBO:0036270"}


id: MONDO:0002605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An angiomyolipoma arising from the liver.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiomyolipoma","termid":"MONDO:0002603"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatic angiomyolipoma","secondary_identifiers":["NCIT:C27485","UMLS:C1333962","DOID:3317","MEDGEN:272705"],"synonyms":[{"name":"liver PEComa","type":"exact"},{"name":"liver angiomyolipoma","type":"exact"}],"termid":"MONDO:0002605","xrefs":{"Monarch":{"xref_id":"0002605"}}}


id: FYPO:0002795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer, but larger, vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large vacuoles during vegetative growth","termid":"FYPO:0000123"},{"relation_name":"is_a","term_name":"vacuoles present in decreased numbers during vegetative growth","termid":"FYPO:0002793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"large vacuoles present in decreased numbers during vegetative growth","synonyms":[{"name":"enlarged vacuoles present in decreased numbers during vegetative growth","type":"exact"},{"name":"large vacuoles present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"large vacuoles present in reduced numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0002795"}


id: GO:1905872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell leading edge.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26324884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell leading edge","termid":"GO:1905871"},{"relation_name":"negatively_regulates","term_name":"protein localization to cell leading edge","termid":"GO:1902463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to cell leading edge","synonyms":[{"name":"down regulation of protein localisation in cell leading edge","type":"exact"},{"name":"down regulation of protein localisation to cell leading edge","type":"exact"},{"name":"down regulation of protein localization in cell leading edge","type":"exact"},{"name":"down regulation of protein localization to cell leading edge","type":"exact"},{"name":"down-regulation of protein localisation in cell leading edge","type":"exact"},{"name":"down-regulation of protein localisation to cell leading edge","type":"exact"},{"name":"down-regulation of protein localization in cell leading edge","type":"exact"},{"name":"down-regulation of protein localization to cell leading edge","type":"exact"},{"name":"downregulation of protein localisation in cell leading edge","type":"exact"},{"name":"downregulation of protein localisation to cell leading edge","type":"exact"},{"name":"downregulation of protein localization in cell leading edge","type":"exact"},{"name":"downregulation of protein localization to cell leading edge","type":"exact"},{"name":"inhibition of protein localisation in cell leading edge","type":"narrow"},{"name":"inhibition of protein localisation to cell leading edge","type":"narrow"},{"name":"inhibition of protein localization in cell leading edge","type":"narrow"},{"name":"inhibition of protein localization to cell leading edge","type":"narrow"},{"name":"negative regulation of protein localisation in cell leading edge","type":"exact"},{"name":"negative regulation of protein localisation to cell leading edge","type":"exact"},{"name":"negative regulation of protein localization in cell leading edge","type":"exact"}],"termid":"GO:1905872"}


id: PBO:0110409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAI1 cis-regulatory eRNA expressed in monocytes 1","termid":"PBO:0110409"}


id: GO:1902125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (+)-pinoresinol.","definition_xrefs":["PMID:8910615","PMID:9872995","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"lignan catabolic process","termid":"GO:0046273"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"(+)-pinoresinol metabolic process","termid":"GO:1902124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(+)-pinoresinol catabolic process","synonyms":[{"name":"(+)-pinoresinol breakdown","type":"exact"},{"name":"(+)-pinoresinol catabolism","type":"exact"},{"name":"(+)-pinoresinol degradation","type":"exact"}],"termid":"GO:1902125"}


id: GO:0047622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine + H2O = D-ribose + adenine.","definition_xrefs":["EC:3.2.2.7","MetaCyc:ADENOSINE-NUCLEOSIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleosidase activity","termid":"GO:0008477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"adenosine nucleosidase activity","secondary_identifiers":["RHEA:18669"],"synonyms":[{"name":"ANase activity","type":"related"},{"name":"N-ribosyladenine ribohydrolase activity","type":"related"},{"name":"adenosinase activity","type":"related"},{"name":"adenosine hydrolase activity","type":"related"},{"name":"adenosine ribohydrolase activity","type":"related"}],"termid":"GO:0047622"}


id: PBO:0058608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6740","termid":"PBO:0058608"}


id: GO:1901396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of transforming growth factor beta2 activation.","definition_xrefs":["GOC:TermGenie","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transforming growth factor beta2 activation (obsolete GO:1901396)","synonyms":[{"name":"down regulation of TGF-beta 2 activation","type":"exact"},{"name":"down regulation of TGFB2 activation","type":"exact"},{"name":"down regulation of TGFbeta 2 activation","type":"exact"},{"name":"down regulation of transforming growth factor beta2 activation","type":"exact"},{"name":"down-regulation of TGF-beta 2 activation","type":"exact"},{"name":"down-regulation of TGFB2 activation","type":"exact"},{"name":"down-regulation of TGFbeta 2 activation","type":"exact"},{"name":"down-regulation of transforming growth factor beta2 activation","type":"exact"},{"name":"downregulation of TGF-beta 2 activation","type":"exact"},{"name":"downregulation of TGFB2 activation","type":"exact"},{"name":"downregulation of TGFbeta 2 activation","type":"exact"},{"name":"downregulation of transforming growth factor beta2 activation","type":"exact"},{"name":"inhibition of TGF-beta 2 activation","type":"exact"},{"name":"inhibition of TGFB2 activation","type":"exact"},{"name":"inhibition of TGFbeta 2 activation","type":"exact"},{"name":"inhibition of transforming growth factor beta2 activation","type":"narrow"},{"name":"negative regulation of TGF-beta 2 activation","type":"exact"},{"name":"negative regulation of TGFB2 activation","type":"exact"},{"name":"negative regulation of TGFbeta 2 activation","type":"exact"}],"termid":"GO:1901396"}


id: PBO:0045292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 44","termid":"PBO:0045292"}


id: GO:1903284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutathione peroxidase activity.","definition_xrefs":["GOC:bf","GO_REF:0000059","GOC:PARL","PMID:23507046","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutathione peroxidase activity","termid":"GO:1903282"},{"relation_name":"is_a","term_name":"positive regulation of peroxidase activity","termid":"GO:2000470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glutathione peroxidase activity","synonyms":[{"name":"activation of GSH peroxidase activity","type":"narrow"},{"name":"activation of glutathione peroxidase activity","type":"narrow"},{"name":"activation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"narrow"},{"name":"activation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"activation of reduced glutathione peroxidase activity","type":"narrow"},{"name":"activation of selenium-glutathione peroxidase activity","type":"narrow"},{"name":"enhancement of GPX activity","type":"exact"},{"name":"positive regulation of GSH peroxidase activity","type":"exact"},{"name":"positive regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"positive regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"positive regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"positive regulation of selenium-glutathione peroxidase activity","type":"exact"},{"name":"up regulation of GSH peroxidase activity","type":"exact"},{"name":"up regulation of glutathione peroxidase activity","type":"exact"},{"name":"up regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"up regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"up regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"up regulation of selenium-glutathione peroxidase activity","type":"exact"},{"name":"up-regulation of GSH peroxidase activity","type":"exact"},{"name":"up-regulation of glutathione peroxidase activity","type":"exact"},{"name":"up-regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"up-regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"up-regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"up-regulation of selenium-glutathione peroxidase activity","type":"exact"},{"name":"upregulation of GSH peroxidase activity","type":"exact"},{"name":"upregulation of glutathione peroxidase activity","type":"exact"},{"name":"upregulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"upregulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"upregulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"upregulation of selenium-glutathione peroxidase activity","type":"exact"}],"termid":"GO:1903284"}


id: PBO:0054916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2330","termid":"PBO:0054916"}


id: PBO:0049910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexosaminidase subunit beta","termid":"PBO:0049910"}


id: GO:0102071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9,10-epoxy-18-hydroxystearate + H2O = 9,10,18-trihydroxystearate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 9,10-epoxy-18-hydroxystearate hydrolase activity (obsolete GO:0102071)","termid":"GO:0102071"}


id: GO:0050279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sepiapterin + H2O = xanthopterin-B2 + NH3.","definition_xrefs":["MetaCyc:SEPIAPTERIN-DEAMINASE-RXN","EC:3.5.4.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"sepiapterin deaminase activity","secondary_identifiers":["RHEA:14025"],"synonyms":[{"name":"sepiapterin aminohydrolase activity","type":"related"}],"termid":"GO:0050279"}


id: GO:0060823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contributes to the formation of the neural plate anterior/posterior pattern.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation (obsolete GO:0060823)","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:0060823"}


id: GO:0052331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cytolytic destruction of red blood cells, with the release of intracellular hemoglobin, in one organism by another, where two organisms are in a symbiotic interaction.","definition_xrefs":["UniProtKB-KW:KW-0354","GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete hemolysis in other organism involved in symbiotic interaction (obsolete GO:0052331)","synonyms":[{"name":"haemolysis in other organism involved in symbiotic interaction","type":"exact"},{"name":"hemolysin activity","type":"related"},{"name":"hemolysis by organism of RBCs in other organism during symbiotic interaction","type":"related"},{"name":"hemolysis by organism of erythrocytes in other organism during symbiotic interaction","type":"related"},{"name":"hemolysis by organism of red blood cells in other organism during symbiotic interaction","type":"related"},{"name":"hemolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"hemolysis of cells in other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0052331"}


id: PBO:0087676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the mitochondrial alpha-ketoglutarate dehydrogenase; recruits E3 subunit (Lpd1p) to the E1-E2 (Kgd1p, Kgd2p) core; exists in two forms derived from a single mRNA translated from two alternative start sites; has similarity to human mitochondrial ribosomal protein MRP-S36","termid":"PBO:0087676"}


id: PBO:0062915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2X 6 pseudogene","termid":"PBO:0062915"}


id: GO:0150136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-37 production.","definition_xrefs":["GOC:aruk","PMID:30362558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-37 production","termid":"GO:0150137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-37 production","synonyms":[{"name":"regulation of interleukin-37 biosynthetic process","type":"narrow"}],"termid":"GO:0150136"}


id: PBO:0091266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific arrestin family membrane adaptor Ste7","termid":"PBO:0091266"}


id: PBO:0048367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase, spermatogenic","termid":"PBO:0048367"}


id: PBO:0087486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cohesin loading factor (Scc2p-Scc4p); complex is required for the loading of cohesin complexes onto chromosomes; involved in establishing sister chromatid cohesion during double-strand break repair via phosphorylated histone H2AX","termid":"PBO:0087486"}


id: GO:0050315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: synephrine = (4-hydroxyphenyl)acetaldehyde + methylammonium.","definition_xrefs":["RHEA:32203","EC:4.2.1.88"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"synephrine dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03359","MetaCyc:SYNEPHRINE-DEHYDRATASE-RXN"],"synonyms":[{"name":"1-(4-hydroxyphenyl)-2-(methylamino)ethanol hydro-lyase (methylamine-forming)","type":"related"}],"termid":"GO:0050315"}


id: PBO:0036437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related GC kinase Nak1","termid":"PBO:0036437"}


id: PBO:0067844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 146","termid":"PBO:0067844"}


id: GO:0004694
data:
  {"annotated_genes":["SJAG_00169","SJAG_01942","SJAG_00690"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70302,72797,75582],"is_not":false,"summary":null,"term":"GO:0004694"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [eukaryotic translation initiation factor 2 alpha subunit] = ADP + [eukaryotic translation initiation factor 2 alpha subunit] phosphate.","definition_xrefs":["InterPro:IPR015516","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_01942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016301","GO:0016740","GO:0004672"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 2alpha kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0004694","terms_by_termid":{"GO:0004694":null}}


id: PBO:0014590
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rrm-containing protein, isolated from a synthetic lethal Mutant with Nab2","termid":"PBO:0014590"}


id: PBO:0013107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3B","termid":"PBO:0013107"}


id: MONDO:0001343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease in which the causes of the disease is a perturbation of the kidney leading to its dysfunction.","definition_xrefs":["MONDO:patterns/disease_by_dysfunctional_structure"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"impaired renal function disease","secondary_identifiers":["DOID:11705","ICD9:588.8","ICD9:588.9","ICD10CM:N25","SCTID:197663003","ICD9:588.89","UMLS:C0341677","MEDGEN:574572"],"synonyms":[{"name":"disease of kidney","type":"broad"},{"name":"kidney disease","type":"broad"}],"termid":"MONDO:0001343","xrefs":{"Monarch":{"xref_id":"0001343"}}}


id: PBO:0082645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of RNA polymerase transcription factor TFIIH holoenzyme; acts as dsDNA-dependent translocase in context of TFIIH, unwinds DNA strands during initiation and promotes transcription start site (TSS) scanning; has DNA-dependent ATPase/helicase activity; interacts functionally with TFIIB, has roles in TSS selection and gene looping to juxtapose initiation and termination regions; involved in DNA repair; relocalizes to cytosol under hypoxia; homolog of human ERCC3","termid":"PBO:0082645"}


id: GO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior associated with attempts to flee from a threat.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fear-induced aggressive behavior","synonyms":[{"name":"fear-induced aggression","type":"exact"}],"termid":"GO:0002122"}


id: MONDO:0016533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial visceral amyloidosis","termid":"MONDO:0007099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"apolipoprotein A-II amyloidosis","secondary_identifiers":["GARD:20631","UMLS:C5679845","MEDGEN:1842484","Orphanet:238269"],"synonyms":[{"name":"AApoAII amyloidosis","type":"exact"},{"name":"familial amyloid nephropathy due to apolipoprotein A-II variant","type":"exact"},{"name":"familial renal amyloidosis due to apolipoprotein A-II variant","type":"exact"},{"name":"hereditary amyloid nephropathy due to apolipoprotein A-II variant","type":"exact"},{"name":"hereditary renal amyloidosis due to apolipoprotein A-II variant","type":"exact"}],"termid":"MONDO:0016533","xrefs":{"Monarch":{"xref_id":"0016533"}}}


id: PBO:0034689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H4-K16_acetylation","termid":"PBO:0034689"}


id: PR:Q9UU99
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC23B6.04c gene.","definition_xrefs":["UniProtKB:Q9UU99","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C23B6.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC23B6.04c","synonyms":[{"name":"Spom972h-SPCC23B6.04c","type":"exact"}],"termid":"PR:Q9UU99"}


id: FYPO:0006612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is decreased at sequences that cause RNA polymerase to terminate transcription.","definition_xrefs":["PMID:29899453","SO:0002213","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin at transcription termination site","synonyms":[{"name":"decreased protein localisation to chromatin at transcription termination site","type":"exact"},{"name":"decreased protein localization to chromatin at transcription termination signal","type":"exact"},{"name":"decreased protein localization to chromatin at transcription termination site during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at transcription termination site during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at transcription termination site","type":"exact"}],"termid":"FYPO:0006612"}


id: MONDO:0001670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Resorption of calcified dental tissue, involving demineralization due to reversal of the cation exchange and lacunar resorption by osteoclasts. There are two types: external (as a result of tooth pathology) and internal (apparently initiated by a peculiar inflammatory hyperplasia of the pulp). (From Jablonski, Dictionary of Dentistry, 1992, p676)","definition_xrefs":["MESH:D014091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth hard tissue disease","termid":"MONDO:0002220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth resorption","secondary_identifiers":["MEDGEN:21587","SCTID:70931000","DOID:13240","UMLS:C0040451","ICD9:521.4"],"termid":"MONDO:0001670","xrefs":{"Monarch":{"xref_id":"0001670"}}}


id: GO:0061982
data:
  {"annotated_genes":["SJAG_01873","SJAG_01138","SJAG_02286","SJAG_01620","SJAG_04303","SJAG_00908","SJAG_03221","SJAG_01371","SJAG_01370","SJAG_04259","SJAG_00377","SJAG_02104","SJAG_03854","SJAG_02556","SJAG_02606","SJAG_00364","SJAG_07002","SJAG_00418","SJAG_03219","SJAG_03073","SJAG_05295","SJAG_05323","SJAG_01224","SJAG_04950","SJAG_02771","SJAG_05196","SJAG_02708","SJAG_05373","SJAG_00757","SJAG_03751","SJAG_04076","SJAG_05185","SJAG_04001","SJAG_03287","SJAG_01211","SJAG_03720","SJAG_00100","SJAG_01708","SJAG_03217","SJAG_03437","SJAG_01775","SJAG_02346","SJAG_01863","SJAG_02311","SJAG_00172","SJAG_03989","SJAG_05266","SJAG_05333","SJAG_03926","SJAG_02652","SJAG_00600","SJAG_03685","SJAG_03525","SJAG_04623","SJAG_00794","SJAG_03673","SJAG_02822","SJAG_01263","SJAG_03942","SJAG_01515","SJAG_01832","SJAG_03567","SJAG_01067","SJAG_04457","SJAG_02465","SJAG_01538","SJAG_00623","SJAG_01777","SJAG_01677","SJAG_04143","SJAG_02616","SJAG_00666","SJAG_02737","SJAG_02561","SJAG_02490","SJAG_04280","SJAG_01419","SJAG_00229","SJAG_01601","SJAG_00113","SJAG_04332","SJAG_01805","SJAG_01076","SJAG_05226","SJAG_03683","SJAG_00140","SJAG_00980","SJAG_02294","SJAG_04287","SJAG_01330","SJAG_01662","SJAG_00935","SJAG_03220","SJAG_00397","SJAG_03327","SJAG_02339","SJAG_02295","SJAG_02267","SJAG_05019","SJAG_02181","SJAG_00918","SJAG_04271","SJAG_03681","SJAG_05319","SJAG_01410","SJAG_04126","SJAG_01156","SJAG_01082","SJAG_00368","SJAG_01278","SJAG_01837","SJAG_02731","SJAG_00756","SJAG_03698","SJAG_04748","SJAG_05220","SJAG_02187","SJAG_05260","SJAG_01044","SJAG_03092","SJAG_02045","SJAG_03048","SJAG_03680","SJAG_02460","SJAG_00727","SJAG_02814"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59137],"is_not":false,"summary":null,"term":"GO:0061982"},{"annotations":[107970,117098,99379,88882,89503],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990918"},{"annotations":[114252,117243,101048,103279,111361,111710,97902,91334,91725,88098,95543,92183,103571],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030989"},{"annotations":[98944,108129,101652,114087,117361,88153,90626,94135,115840],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[79261,88099,108130,110860,111533],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007129"},{"annotations":[118010,117166,89702,92131],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045143"},{"annotations":[111534,106905,101750],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[89934,117362],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030999"},{"annotations":[108027,117543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007127"},{"annotations":[114801,106634],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[64705,90104],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[103132,90105,105424,87742,100245],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[99446,113534,114088,102111,116203,101591,108131,94139,104812,114802],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"},{"annotations":[79766,91811,89507,79592,95086,107039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042138"},{"annotations":[90677,109057,111435,105196,109954],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0010780"},{"annotations":[78909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[107972,110612],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0010772"},{"annotations":[106930,116360,91770],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033315"},{"annotations":[89635,100868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006311"},{"annotations":[110613,100869,88823,101838,79263,107973,97248,117403],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000709"},{"annotations":[92100,108060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000710"},{"annotations":[94222,110490],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051755"},{"annotations":[100966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902346"},{"annotations":[99382,107974,110614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000708"},{"annotations":[100870,79257,88824],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0010774"},{"annotations":[97047,117862,116246,117998],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045141"},{"annotations":[114293],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044821"},{"annotations":[100459,99016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[70953,78836],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0110031"},{"annotations":[73890],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0110032"},{"annotations":[114091],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[102692,108668],"is_not":false,"rel_names":["positively_regulates","regulates","part_of"],"summary":null,"term":"GO:1905263"},{"annotations":[100905,107040,89937,104643,91146,78198,69631,71443,79593,93022,104183,93095,100968,101462,105160,115841,91812],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007131"},{"annotations":[101655],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[116982],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[108457,79538,72050,110636,117599,75313,109392,74776,117749,77043],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000712"},{"annotations":[116536],"is_not":false,"rel_names":["part_of","regulates"],"summary":null,"term":"GO:0062209"},{"annotations":[110200,98952,91323,108133,90089,100844,98230,110626,109197,95894,114404,117218,94152,109453,101656,107817,110669,95648,113537,89485,116228,102752,105799],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"A process that contributes to the first meiotic division. The first meiotic division is the reductive division resulting in the separation of homologous chromosome pairs.","definition_xrefs":["PMID:29385397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":126,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00172":null,"SJAG_00229":null,"SJAG_00364":null,"SJAG_00368":null,"SJAG_00377":null,"SJAG_00397":null,"SJAG_00418":null,"SJAG_00600":null,"SJAG_00623":null,"SJAG_00666":null,"SJAG_00727":null,"SJAG_00756":null,"SJAG_00757":null,"SJAG_00794":null,"SJAG_00908":null,"SJAG_00918":null,"SJAG_00935":null,"SJAG_00980":null,"SJAG_01044":null,"SJAG_01067":null,"SJAG_01076":null,"SJAG_01082":null,"SJAG_01138":null,"SJAG_01156":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01263":null,"SJAG_01278":null,"SJAG_01330":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01515":null,"SJAG_01538":null,"SJAG_01601":null,"SJAG_01620":null,"SJAG_01662":null,"SJAG_01677":null,"SJAG_01708":null,"SJAG_01775":null,"SJAG_01777":null,"SJAG_01805":null,"SJAG_01832":null,"SJAG_01837":null,"SJAG_01863":null,"SJAG_01873":null,"SJAG_02045":null,"SJAG_02104":null,"SJAG_02181":null,"SJAG_02187":null,"SJAG_02267":null,"SJAG_02286":null,"SJAG_02294":null,"SJAG_02295":null,"SJAG_02311":null,"SJAG_02339":null,"SJAG_02346":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02490":null,"SJAG_02556":null,"SJAG_02561":null,"SJAG_02606":null,"SJAG_02616":null,"SJAG_02652":null,"SJAG_02708":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02771":null,"SJAG_02814":null,"SJAG_02822":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03092":null,"SJAG_03217":null,"SJAG_03219":null,"SJAG_03220":null,"SJAG_03221":null,"SJAG_03287":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03525":null,"SJAG_03567":null,"SJAG_03673":null,"SJAG_03680":null,"SJAG_03681":null,"SJAG_03683":null,"SJAG_03685":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_03751":null,"SJAG_03854":null,"SJAG_03926":null,"SJAG_03942":null,"SJAG_03989":null,"SJAG_04001":null,"SJAG_04076":null,"SJAG_04126":null,"SJAG_04143":null,"SJAG_04259":null,"SJAG_04271":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04303":null,"SJAG_04332":null,"SJAG_04457":null,"SJAG_04623":null,"SJAG_04748":null,"SJAG_04950":null,"SJAG_05019":null,"SJAG_05185":null,"SJAG_05196":null,"SJAG_05220":null,"SJAG_05226":null,"SJAG_05260":null,"SJAG_05266":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_05323":null,"SJAG_05333":null,"SJAG_05373":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiosis I cell cycle process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"first meiotic cell division","type":"exact"}],"termid":"GO:0061982","terms_by_termid":{"GO:0000707":null,"GO:0000708":null,"GO:0000709":null,"GO:0000710":null,"GO:0000712":null,"GO:0006311":null,"GO:0007127":null,"GO:0007129":null,"GO:0007131":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0030989":null,"GO:0030999":null,"GO:0031619":null,"GO:0032118":null,"GO:0032121":null,"GO:0033315":null,"GO:0042138":null,"GO:0044821":null,"GO:0045141":null,"GO:0045143":null,"GO:0051455":null,"GO:0051755":null,"GO:0061982":null,"GO:0062209":null,"GO:0070197":null,"GO:0110031":null,"GO:0110032":null,"GO:1902346":null,"GO:1904967":null,"GO:1905263":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990813":null,"GO:1990918":null,"GO:1990949":null}}


id: PBO:0080559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 4","termid":"PBO:0080559"}


id: MOD:00295
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-octanoyl-L-serine.","definition_xrefs":["RESID:AA0290","PubMed:12716131","PubMed:10604470","Unimod:426#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-octanoylated residue","termid":"MOD:00669"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-octanoyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(octanoyloxy)propanoic acid","type":"exact"},{"name":"L-serine octanoate ester","type":"exact"},{"name":"LIPID O-octanoyl serine","type":"exact"},{"name":"O-octanoyl-L-serine","type":"exact"},{"name":"O-octanoylated L-serine","type":"exact"},{"name":"O3-octanoyl-L-serine","type":"exact"},{"name":"OOctSer","type":"exact"},{"name":"Octanoyl","type":"related"},{"name":"octanoyl","type":"related"}],"termid":"MOD:00295"}


id: PBO:0058113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4328","termid":"PBO:0058113"}


id: FYPO:0001205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which alpha-glucosidase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal alpha-glucosidase activity","termid":"FYPO:0001183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished alpha-glucosidase activity","synonyms":[{"name":"alpha-glucosidase activity abolished","type":"exact"}],"termid":"FYPO:0001205"}


id: PBO:0039916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 16","termid":"PBO:0039916"}


id: PBO:0004922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN component scaffold protein Sid4","termid":"PBO:0004922"}


id: PBO:0076868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 14B, pseudogene","termid":"PBO:0076868"}


id: MONDO:0034109
data:
  {"annotated_genes":["SJAG_00228"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87460],"is_not":false,"summary":null,"term":"MONDO:0034109"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy with reduced type 2 muscle fibers","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5193081","OMIM:618414","GARD:17989","MEDGEN:1672638","DOID:0081346","Orphanet:544602"],"synonyms":[{"name":"myopathy, congenital, with fast-twitch (type II) fiber atrophy","type":"exact"},{"name":"myopathy, congenital, with fast-twitch (type II) fibre atrophy","type":"exact"}],"termid":"MONDO:0034109","terms_by_termid":{"MONDO:0034109":null},"xrefs":{"Monarch":{"xref_id":"0034109"}}}


id: GO:0030577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of Lands, a class of nuclear body that react against SP140 auto-antibodies.","definition_xrefs":["GOC:mah","PMID:10921892","PMID:8695863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Lands organization","synonyms":[{"name":"LYSP100-associated nuclear domain organization","type":"exact"},{"name":"Lands organisation","type":"exact"},{"name":"Lands organization and biogenesis","type":"related"}],"termid":"GO:0030577"}


id: MONDO:0000559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000559 (obsolete MONDO:0000559)","termid":"MONDO:0000559","xrefs":{"Monarch":{"xref_id":"0000559"}}}


id: PBO:0031714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_transport","termid":"PBO:0031714"}


id: MONDO:0013539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukotriene C4 synthase deficiency is an extremely rare fatal neurometabolic developmental disorder characterized clinically by muscular hypotonia, psychomotor retardation, failure to thrive, and microcephaly.","definition_xrefs":["Orphanet:79507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypotonia-failure to thrive-microcephaly syndrome","secondary_identifiers":["UMLS:C3279662","SCTID:717185008","GARD:16725","MESH:C565439","OMIM:614037","MEDGEN:481292"],"synonyms":[{"name":"LTC4 synthase deficiency","type":"exact"},{"name":"leukotriene C4 synthase deficiency","type":"exact"}],"termid":"MONDO:0013539","xrefs":{"Monarch":{"xref_id":"0013539"}}}


id: PBO:0080715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WRN RecQ like helicase","termid":"PBO:0080715"}


id: PBO:0000706
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.19","termid":"PBO:0000706"}


id: PBO:0074428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 28","termid":"PBO:0074428"}


id: MONDO:0005260
data:
  {"annotated_genes":["SJAG_02279"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87428],"is_not":false,"summary":null,"term":"MONDO:0005260"}]},"cv_name":"mondo","definition":"Persistent deficits in social interaction and communication and interaction as well as a markedly restricted repertoire of activity and interest as well as repetitive patterns of behavior.","definition_xrefs":["PMID:28879490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autism spectrum disorder","termid":"MONDO:0005258"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02279":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"autism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0000717","EFO:0003758","NCIT:C97161","ICD9:299.0","MESH:D001321","DOID:12849","UMLS:C0004352","OMIM:209850","MEDGEN:13966"],"synonyms":[{"name":"Kanner's syndrome","type":"exact"},{"name":"autism","type":"exact"},{"name":"autism (disease)","type":"exact"},{"name":"autism spectrum disorder","type":"broad"},{"name":"autism, susceptiblity to","type":"narrow"},{"name":"autistic disorder","type":"related"},{"name":"autistic disorder of childhood onset","type":"exact"},{"name":"childhood autism","type":"exact"},{"name":"infantile autism","type":"exact"}],"termid":"MONDO:0005260","terms_by_termid":{"MONDO:0005260":null},"xrefs":{"Monarch":{"xref_id":"0005260"}}}


id: MONDO:0010198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wernicke-Korsakoff syndrome is a brain disorder, due to thiamine deficiency that has been associated with both Wernicke's encephalopathy and Korsakoff syndrome. The term refers to two different syndromes, each representing a different stage of the disease. Wernicke's encephalopathy represents the 'acute' phase and Korsakoff's syndrome represents the 'chronic' phase. However, they are used interchangeable in many sites. Wernicke's encephalopathy is characterized by confusion, abnormal stance and gait (ataxia), and abnormal eye movements (nystagmus). Korsakoff's syndrome is observed in a small number of patients. It is a type of dementia, characterized by memory loss and confabulation (filling in of memory gaps with data the patient can readily recall) and involvement of the heart, vascular, and nervous system. Wernicke-Korsakoff syndrome mainly results from chronic alcohol use, but also from dietary deficiencies, prolonged vomiting, eating disorders, systemic diseases (cancer, AIDS, infections), bariatric surgery, transplants, or the effects of chemotherapy. Studies indicate that there may be some genetic predisposition for the disease.Treatment involves supplementing the diet with thiamine. Wernicke encephalopathy is an acute syndrome and requires emergency treatment to prevent death and neurologic complications. In cases where the diagnosis is not confirmed, patients should still be treated while additional evaluations are completed.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"nutritional deficiency disease","termid":"MONDO:0006873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wernicke-Korsakoff syndrome","secondary_identifiers":["UMLS:C0349464","DOID:10915","icd11.foundation:2017611840","NCIT:C35764","MEDGEN:83883","SCTID:69482004","OMIM:277730","MedDRA:10047913","MESH:C538669","EFO:1001242"],"synonyms":[{"name":"Korsakoff syndrome","type":"exact"},{"name":"Korsakoff's psychosis","type":"exact"},{"name":"Korsakoff's syndrome","type":"exact"},{"name":"Korsakov psychosis","type":"exact"},{"name":"Korsakov's psychosis","type":"exact"},{"name":"Wernicke encephalopathy","type":"related"},{"name":"Wernicke-Korsakoff syndrome","type":"exact"},{"name":"alcohol-induced encephalopathy","type":"related"},{"name":"transketolase defect","type":"related"}],"termid":"MONDO:0010198","xrefs":{"Monarch":{"xref_id":"0010198"}}}


id: MONDO:0009272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"German syndrome is an autosomal recessive arthrogryposis syndrome, described in 5 cases. Three of the four known families with affected children were Ashkenazi Jews. German syndrome is characterized by arthrogryposis, hypotonia-hypokinesia sequence, and lymphedema. Patients present distinct craniofacial appearance (tall forehead and ''carp''-shaped mouth, cleft palate), contractures, severe hypotonia manifesting as motor delay, and swallowing difficulties. The disease has a severe morbidity and mortality rate and survivors present a small stature, hypotonia, frequent upper respiratory infections, and psychomotor delay. There have been no further descriptions in the literature since 1987.","definition_xrefs":["Orphanet:2077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"fetal trimethadione syndrome","termid":"MONDO:0016009"},{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"German syndrome","secondary_identifiers":["MEDGEN:854357","OMIM:231080","UMLS:C3887495","SCTID:733037000","MESH:C562543","GARD:2462"],"synonyms":[{"name":"German syndrome","type":"exact"}],"termid":"MONDO:0009272","xrefs":{"Monarch":{"xref_id":"0009272"}}}


id: PBO:0113497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF4G and scaffold protein; subunit of the mRNA cap-binding protein complex (eIF4F) with eIF4E (Cdc33p) and eIF4A (Tif1p/Tif2p); stimulates the ATPase and helicase activities of eIF4A synergistically with eIF4G; required with eIF4E for Ded1p-mediated stimulation of mRNA recruitment during 48S preinitiation complex (PIC) assembly; association with Pab1p mediates poly(A) tail-stimulated translation; role in assembly of PET region in biogenesis of 60S ribosomal subunit","termid":"PBO:0113497"}


id: PR:O60085
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methionine aminopeptidase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03176","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.03","secondary_identifiers":["UniProtKB:O60085"],"synonyms":[{"name":"MAP 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MetAP 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-METAP2","type":"exact"},{"name":"peptidase M (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60085"}


id: PBO:0059218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 1","termid":"PBO:0059218"}


id: GO:0047766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-carbamoyl-L-serine + H2O + H+ = CO2 + 2 NH4 + pyruvate.","definition_xrefs":["EC:4.3.1.13","RHEA:15445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"carbamoyl-serine ammonia-lyase activity","secondary_identifiers":["KEGG_REACTION:R00213","MetaCyc:CARBAMOYL-SERINE-AMMONIA-LYASE-RXN"],"synonyms":[{"name":"O-carbamoyl-L-serine ammonia-lyase (decarboxylating; pyruvate-forming)","type":"related"},{"name":"O-carbamoyl-L-serine ammonia-lyase (pyruvate-forming)","type":"related"},{"name":"O-carbamoyl-L-serine deaminase activity","type":"related"},{"name":"carbamoylserine deaminase activity","type":"related"}],"termid":"GO:0047766"}


id: PBO:0077665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 11b","termid":"PBO:0077665"}


id: PBO:0087117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome biogenesis factor required for maturation of 18S rRNA; null mutant is sensitive to hydroxyurea and is delayed in recovering from alpha-factor arrest; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus","termid":"PBO:0087117"}


id: MONDO:0043512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Encephalopathy resulting from trauma.","definition_xrefs":["NCIT:C35542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traumatic encephalopathy","secondary_identifiers":["MEDGEN:536661","icd11.foundation:1673722101","UMLS:C0236959","SCTID:230282000"],"synonyms":[{"name":"dementia due to head trauma","type":"narrow"},{"name":"post-traumatic brain syndrome","type":"narrow"},{"name":"post-traumatic dementia","type":"narrow"},{"name":"traumatic encephalopathy","type":"exact"}],"termid":"MONDO:0043512","xrefs":{"Monarch":{"xref_id":"0043512"}}}


id: PBO:0042717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENATAC divergent transcript","termid":"PBO:0042717"}


id: PBO:0075819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slingshot protein phosphatase 3","termid":"PBO:0075819"}


id: FYPO:0007498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at one or more cohesin-associated regions (CARs) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PMID:31895039","PomBase:mah","PMID:27226485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"decreased chromatin binding at cohesin associated regions","synonyms":[{"name":"decreased chromatin binding at CARs","type":"exact"},{"name":"decreased chromatin binding at cohesin associated regions during mitotic cell cycle","type":"related"},{"name":"decreased chromatin binding at cohesin associated regions during vegetative growth","type":"exact"},{"name":"reduced chromatin binding at cohesin associated regions","type":"exact"}],"termid":"FYPO:0007498"}


id: PBO:0041205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Burkitt lymphoma variant rearranging region 1","termid":"PBO:0041205"}


id: MONDO:0001249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic infection of the conjunctiva and cornea caused by chlamydia trachomatis.","definition_xrefs":["MESH:D014141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlamydia trachomatis infectious disease","termid":"MONDO:0005701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trachoma","secondary_identifiers":["MEDGEN:52801","icd11.foundation:372424530","ICD9:076.1","UMLS:C0040592","ICD9:076.9","SCTID:2576002","ICD9:076.0","DOID:11265","ICD9:076"],"synonyms":[{"name":"active stage trachoma","type":"exact"},{"name":"trachoma dubium","type":"exact"}],"termid":"MONDO:0001249","xrefs":{"Monarch":{"xref_id":"0001249"}}}


id: GO:0045340
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mercury ion (Hg2+).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0046872"],"is_obsolete":false,"name":"mercury ion binding","synonyms":[{"name":"Hg ion binding","type":"exact"},{"name":"mercury binding","type":"exact"}],"termid":"GO:0045340"}


id: PBO:0000810
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside mannosyltransferase","termid":"PBO:0000810"}


id: SO:0001390
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified cysteine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_cysteine","secondary_identifiers":["MOD:00905"],"synonyms":[{"name":"ModCys","type":"exact"},{"name":"modified L cysteine","type":"exact"},{"name":"modified L-cysteine","type":"exact"}],"termid":"SO:0001390"}


id: GO:0006125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_electron_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin pathway (obsolete GO:0006125)","synonyms":[{"name":"thioredoxin pathway","type":"exact"},{"name":"thioredoxin reduction","type":"narrow"}],"termid":"GO:0006125"}


id: FYPO:0001797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translation is abnormal. Translation is the synthesis of a protein using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain.","definition_xrefs":["PomBase:mah","GO:0006412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation phenotype","termid":"FYPO:0000291"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal translation","synonyms":[{"name":"abnormal protein biosynthesis","type":"exact"},{"name":"abnormal protein synthesis","type":"exact"},{"name":"abnormal translation during mitotic cell cycle","type":"related"},{"name":"abnormal translation during vegetative growth","type":"exact"}],"termid":"FYPO:0001797"}


id: PBO:0056540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF.2 cell line derived transforming sequence","termid":"PBO:0056540"}


id: GO:0019478
data:
  {"annotated_genes":["SJAG_04827","SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80738],"is_not":false,"summary":null,"term":"GO:0019478"},{"annotations":[79298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-amino acids, the D-enantiomers of amino acids.","definition_xrefs":["GOC:jsg","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02496":null,"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"D-amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"D-amino acid breakdown","type":"exact"},{"name":"D-amino acid catabolism","type":"exact"},{"name":"D-amino acid degradation","type":"exact"}],"termid":"GO:0019478","terms_by_termid":{"GO:0019478":null,"GO:0036088":null}}


id: GO:0035146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of specific branches of a tubular system to form a continuous network.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"branching morphogenesis of an epithelial tube","termid":"GO:0048754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tube fusion","termid":"GO:0035146"}


id: PBO:0061008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"niban apoptosis regulator 1","termid":"PBO:0061008"}


id: MONDO:0035001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder of the visual organs (obsolete MONDO:0035001)","secondary_identifiers":["Orphanet:520814"],"termid":"MONDO:0035001","xrefs":{"Monarch":{"xref_id":"0035001"}}}


id: GO:1904329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myofibroblast contraction.","definition_xrefs":["PMID:19239477","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of myofibroblast contraction","termid":"GO:1904328"},{"relation_name":"negatively_regulates","term_name":"myofibroblast contraction","termid":"GO:1990764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myofibroblast contraction","synonyms":[{"name":"down regulation of MF contraction","type":"exact"},{"name":"down regulation of MFB contraction","type":"exact"},{"name":"down regulation of myofibroblast contraction","type":"exact"},{"name":"down-regulation of MF contraction","type":"exact"},{"name":"down-regulation of MFB contraction","type":"exact"},{"name":"down-regulation of myofibroblast contraction","type":"exact"},{"name":"downregulation of MF contraction","type":"exact"},{"name":"downregulation of MFB contraction","type":"exact"},{"name":"downregulation of myofibroblast contraction","type":"exact"},{"name":"inhibition of MF contraction","type":"narrow"},{"name":"inhibition of MFB contraction","type":"narrow"},{"name":"inhibition of myofibroblast contraction","type":"narrow"},{"name":"negative regulation of MF contraction","type":"exact"},{"name":"negative regulation of MFB contraction","type":"exact"}],"termid":"GO:1904329"}


id: PATO:0000379
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000379 relative frequency value (obsolete PATO:0000379)","termid":"PATO:0000379"}


id: PBO:0081718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 646 pseudogene 1","termid":"PBO:0081718"}


id: MOD:00833
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-glucosyl-asparagine.","definition_xrefs":["RESID:AA0421","PubMed:3410849","PubMed:1569073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylated residue","termid":"MOD:00433"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"N4-hexosylated asparagine","termid":"MOD:01346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-glucosyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-(D-glucopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"CARBOHYD N-linked (Glc)","type":"exact"},{"name":"CARBOHYD N-linked (Glc) asparagine","type":"exact"},{"name":"N4-(D-glucopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-asparagine-glucoside","type":"exact"},{"name":"N4-glucosyl-L-asparagine","type":"exact"},{"name":"N4-glucosylasparagine","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4GlcAsn","type":"exact"}],"termid":"MOD:00833"}


id: MONDO:0004229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the breast parenchyma and is characterized by cellular discohesion resulting in a pseudoangiosarcomatous pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell breast carcinoma","termid":"MONDO:0006056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"acantholytic variant squamous cell breast carcinoma","secondary_identifiers":["MEDGEN:274268","NCIT:C40359","DOID:7459","UMLS:C1519485"],"synonyms":[{"name":"squamous cell breast carcinoma, acantholytic variant","type":"exact"}],"termid":"MONDO:0004229","xrefs":{"Monarch":{"xref_id":"0004229"}}}


id: GO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a naive natural killer cell acquires the specialized features of an effector natural killer T cell as part of an immune response.","definition_xrefs":["GOC:add","PMID:11698225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell differentiation","termid":"GO:0001779"},{"relation_name":"is_a","term_name":"lymphocyte activation involved in immune response","termid":"GO:0002285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell differentiation involved in immune response","synonyms":[{"name":"NK cell differentiation during immune response","type":"related"},{"name":"natural killer cell development involved in immune response","type":"related"},{"name":"natural killer cell differentiation during immune response","type":"related"}],"termid":"GO:0002325"}


id: MONDO:1040006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neurodevelopmental disorder in which the cause of the disease is a variation in the CTR9 gene. This disorder is characterised by varying degrees of intellectual disability, neurodevelopmental delay, hypotonia, fatigability, behavioral abnormalities including autism spectrum disorder, anxiety and aggressive behavior, cardiac anomalies, and mild facial dysmorphism.","definition_xrefs":["PMID:35499524","PMID:35717577","PMID:35468861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"CTR9-related neurodevelopmental disorder","termid":"MONDO:1040006","xrefs":{"Monarch":{"xref_id":"1040006"}}}


id: PBO:0056624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 6","termid":"PBO:0056624"}


id: GO:0071333
data:
  {"annotated_genes":["SJAG_03081","SJAG_02444","SJAG_00472","SJAG_04026","SJAG_04312","SJAG_00574","SJAG_01754","SJAG_01254","SJAG_01699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116862,94566,109827,115834,109321,107161,102163,106811,106225],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular glucose homeostasis","termid":"GO:0001678"},{"relation_name":"is_a","term_name":"response to glucose","termid":"GO:0009749"},{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucose stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071333","terms_by_termid":{"GO:0010619":null}}


id: PBO:0065934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 8","termid":"PBO:0065934"}


id: PBO:0071137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 like 1","termid":"PBO:0071137"}


id: PBO:0063455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE11A antisense RNA 1","termid":"PBO:0063455"}


id: GO:0034498
data:
  {"annotated_genes":["SJAG_02750","SJAG_04219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71910,115526],"is_not":false,"summary":null,"term":"GO:0034498"}]},"cv_name":"biological_process","definition":"The directed movement of substances from early endosomes to the Golgi.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02750":null,"SJAG_04219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"early endosome to Golgi transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"PGE to Golgi transport","type":"exact"},{"name":"post-Golgi endosome to Golgi transport","type":"exact"}],"termid":"GO:0034498","terms_by_termid":{"GO:0034498":null}}


id: MOD:00959
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3,3',5,5'-TerTyr (Crosslink)","termid":"MOD:00959"}


id: GO:0008848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete enterobactin synthetase (obsolete GO:0008848)","synonyms":[{"name":"enterobactin synthetase","type":"exact"},{"name":"enterochelin synthetase activity","type":"exact"},{"name":"nonribosomal peptide synthetase","type":"related"}],"termid":"GO:0008848"}


id: PBO:0084113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase encoded by the Y' element of subtelomeric regions; highly expressed in the mutants lacking the telomerase component TLC1; potentially phosphorylated by Cdc28p","termid":"PBO:0084113"}


id: MONDO:0957921
data:
  {"annotated_genes":["SJAG_02701"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86604],"is_not":false,"summary":null,"term":"MONDO:0957921"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Cornelia de Lange syndrome","termid":"MONDO:0016033"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02701":null},"genotype_count":0,"is_obsolete":false,"name":"Cornelia de Lange syndrome 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620568","UMLS:C5882712","DOID:0060970","MEDGEN:1848930"],"termid":"MONDO:0957921","terms_by_termid":{"MONDO:0957921":null},"xrefs":{"Monarch":{"xref_id":"0957921"}}}


id: GO:0061261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity, forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition","termid":"GO:0060231"},{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"part_of","term_name":"mesonephros morphogenesis","termid":"GO:0061206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","synonyms":[{"name":"mesonephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:0061261"}


id: PBO:0041388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 47","termid":"PBO:0041388"}


id: GO:0086046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which SA node cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"SA node cell action potential","termid":"GO:0086015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane depolarization during SA node cell action potential","synonyms":[{"name":"membrane depolarization involved in regulation of SA node cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization involved in regulation of SAN cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization involved in regulation of sinoatrial node cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization involved in regulation of sinus node cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:0086046"}


id: SO:0002166
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ref_miRNA (RefSeq-miRNA) sequence is assigned at the creation of a new mature miRNA entry in a database. The ref_miRNA sequence designation remains unchanged even if a different isomiR is later shown to be expressed at a higher level. A ref_miRNA can be produced by one or multiple pre-miRNA.","definition_xrefs":["PMID:26453491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA","termid":"SO:0000276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ref_miRNA","synonyms":[{"name":"RefSeq miRNA","type":"exact"},{"name":"RefSeq-miRNA","type":"exact"},{"name":"ref miRNA","type":"exact"}],"termid":"SO:0002166"}


id: PBO:0086957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of peroxisome abundance; peroxisomal membrane protein, remote homolog to several curvature-generating human proteins; functionally interacts with vesicle-budding-inducing ADP-ribosylation factor Arf1p","termid":"PBO:0086957"}


id: MONDO:0011284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unequal curvature of the refractive surfaces of the eye. Thus a point source of light cannot be brought to a point focus on the retina but is spread over a more or less diffuse area. This results from the radius of curvature in one plane being longer or shorter than the radius at right angles to it. (Dorland, 27th ed)","definition_xrefs":["MESH:D001251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"refractive error","termid":"MONDO:0004892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"astigmatism","secondary_identifiers":["DOID:11782","icd11.foundation:402558626","OMIM:603047","UMLS:C0004106","MEDGEN:2473","ICD9:367.2","SCTID:82649003","CSP:1116-1831","HP:0000483","ICD9:367.20"],"synonyms":[{"name":"astigmatism","type":"exact"},{"name":"astigmatism (disease)","type":"exact"}],"termid":"MONDO:0011284","xrefs":{"Monarch":{"xref_id":"0011284"}}}


id: MONDO:0003424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm composed of large cells with abundant eosinophilic granular cytoplasm. Representative examples include oncocytic adenomas of the thyroid gland, parathyroid gland, and pituitary gland.","definition_xrefs":["NCIT:C3759"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"oncocytic neoplasm","termid":"MONDO:0010795"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oncocytic adenoma","secondary_identifiers":["UMLS:C1510502","DOID:5389","ICDO:8290/0","EFO:1001079","MEDGEN:307150"],"synonyms":[{"name":"follicular adenoma, oxyphilic cell","type":"exact"},{"name":"oncocytic adenoma","type":"exact"},{"name":"oncocytoma","type":"exact"},{"name":"oxyphilic adenoma","type":"exact"}],"termid":"MONDO:0003424","xrefs":{"Monarch":{"xref_id":"0003424"}}}


id: GO:0045545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to syndecan, an integral membrane proteoglycan (250-300 kDa) associated largely with epithelial cells.","definition_xrefs":["GOC:go_curators","PMID:9355727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan binding","termid":"GO:0043394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"syndecan binding","termid":"GO:0045545"}


id: GO:0034368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a protein-lipid complex.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex remodeling","termid":"GO:0034367"},{"relation_name":"is_a","term_name":"protein-lipid complex organization","termid":"GO:0071825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-lipid complex remodeling","synonyms":[{"name":"protein-lipid complex remodelling","type":"exact"}],"termid":"GO:0034368"}


id: PBO:0088763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase","termid":"PBO:0088763"}


id: GO:0070059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to a stimulus indicating endoplasmic reticulum (ER) stress, and ends when the execution phase of apoptosis is triggered. ER stress usually results from the accumulation of unfolded or misfolded proteins in the ER lumen.","definition_xrefs":["GOC:mah","PMID:18701708","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","synonyms":[{"name":"ER stress-induced apoptosis","type":"exact"},{"name":"apoptosis in response to ER stress","type":"exact"},{"name":"apoptosis in response to endoplasmic reticulum stress","type":"broad"},{"name":"apoptosis triggered by ER stress","type":"exact"},{"name":"endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:0070059"}


id: GO:0034584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a piRNA, a Piwi-associated RNA, a 24- to 30-nucleotide RNA derived from repeat or complex DNA sequence elements and processed by a Dicer-independent mechanism.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory RNA binding","termid":"GO:0061980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"piRNA binding","synonyms":[{"name":"Piwi-associated RNA binding","type":"exact"}],"termid":"GO:0034584"}


id: PBO:0041650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit alpha2delta 4","termid":"PBO:0041650"}


id: GO:1905609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smooth muscle cell-matrix adhesion.","definition_xrefs":["GOC:TermGenie","PMID:14970114","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-matrix adhesion","termid":"GO:0001954"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell-matrix adhesion","termid":"GO:2000097"},{"relation_name":"positively_regulates","term_name":"smooth muscle cell-matrix adhesion","termid":"GO:0061302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of smooth muscle cell-matrix adhesion","synonyms":[{"name":"activation of smooth muscle cell-matrix adhesion","type":"narrow"},{"name":"up regulation of smooth muscle cell-matrix adhesion","type":"exact"},{"name":"up-regulation of smooth muscle cell-matrix adhesion","type":"exact"},{"name":"upregulation of smooth muscle cell-matrix adhesion","type":"exact"}],"termid":"GO:1905609"}


id: FYPO:0001378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular calcium level","termid":"FYPO:0001198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular calcium level during cellular response to salt stress","synonyms":[{"name":"increased calcium accumulation during cellular response to salt stress","type":"related"},{"name":"increased cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"increased cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001378"}


id: PBO:0083869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein containing five copies of the WD40 motif; controls cell cycle function, sulfur metabolism, and methionine biosynthesis as part of the ubiquitin ligase complex; interacts with and regulates Met4p, localizes within the nucleus; dissociation of Met30p from SCF complex in response to cadmium stress is regulated by Cdc48p","termid":"PBO:0083869"}


id: PBO:0112695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane phosphate exporter Spx2/Xpr1","termid":"PBO:0112695"}


id: FYPO:0002886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to heavy metal stress. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"normal transcription during cellular response to heavy metal stress","synonyms":[{"name":"normal transcription during cellular response to heavy metal stress during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to heavy metal stress during vegetative growth","type":"exact"},{"name":"normal transcription in response to heavy metal stress","type":"exact"}],"termid":"FYPO:0002886"}


id: GO:0070897
data:
  {"annotated_genes":["SJAG_02813","SJAG_00766","SJAG_02174","SJAG_03956","SJAG_04274","SJAG_01771","SJAG_00692","SJAG_00741","SJAG_01475","SJAG_02691","SJAG_03095","SJAG_01523","SJAG_01808","SJAG_03900","SJAG_04654","SJAG_03120","SJAG_02458","SJAG_03285","SJAG_03007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79924,90050],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045899"},{"annotations":[68843,77879,64205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001188"},{"annotations":[70861,72297,77612,77206,74844,75967,67585,71057,75296,94483,74047,71706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051123"},{"annotations":[103383,72161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070898"}]},"cv_name":"biological_process","definition":"The formation of a large multiprotein-DNA complex that self-assembles on gene promoter through the sequential recruitment of the general initiation factors that compose the preinitiation complex (PIC). The PIC engages the RNA polymerase on its DNA template strand and sparks polymerization of the first few RNA nucleotides.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00692":null,"SJAG_00741":null,"SJAG_00766":null,"SJAG_01475":null,"SJAG_01523":null,"SJAG_01771":null,"SJAG_01808":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_02691":null,"SJAG_02813":null,"SJAG_03007":null,"SJAG_03095":null,"SJAG_03120":null,"SJAG_03285":null,"SJAG_03900":null,"SJAG_03956":null,"SJAG_04274":null,"SJAG_04654":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0065003","GO:0008150","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"transcription preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0001126"],"synonyms":[{"name":"DNA-dependent transcriptional preinitiation complex assembly","type":"exact"},{"name":"DNA-templated transcriptional preinitiation complex assembly","type":"exact"},{"name":"bacterial-type RNA polymerase preinitiation complex assembly","type":"narrow"},{"name":"bacterial-type RNA polymerase transcription PIC formation","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional preinitiation complex formation","type":"narrow"},{"name":"transcription PIC biosynthesis","type":"broad"},{"name":"transcription PIC formation","type":"broad"},{"name":"transcriptional preinitiation complex formation","type":"broad"}],"termid":"GO:0070897","terms_by_termid":{"GO:0001188":null,"GO:0045899":null,"GO:0051123":null,"GO:0070898":null}}


id: PBO:0066102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS and EF-hand domain containing","termid":"PBO:0066102"}


id: PBO:0050650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class A member 6, pseudogene","termid":"PBO:0050650"}


id: PBO:0082185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alcohol acetyltransferase; may play a role in steroid detoxification; forms volatile esters during fermentation, which is important for brewing and winemaking","termid":"PBO:0082185"}


id: PATO:0000620
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally dorsal structures.","definition_xrefs":["PATOC:melissa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsalized","termid":"PATO:0000620"}


id: FYPO:0005885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to myxothiazol. Cells stop growing (and may die) at a concentration of myxothiazol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to myxothiazol","synonyms":[{"name":"hypersensitive to myxothiazol","type":"exact"},{"name":"sensitive to MXT","type":"exact"},{"name":"sensitive to myxothiazol during mitotic cell cycle","type":"related"},{"name":"sensitive to myxothiazol during vegetative growth","type":"exact"}],"termid":"FYPO:0005885"}


id: PBO:0011106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome C oxidase transmembrane region (subunit 2 variant)","termid":"PBO:0011106"}


id: MONDO:0022754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cytogenetic abnormality that refers to the allelic loss of all or part of the short arm of chromosome 17.","definition_xrefs":["NCIT:C36499"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Smith-Magenis syndrome","termid":"MONDO:0008434"},{"relation_name":"is_a","term_name":"partial deletion of chromosome 17","termid":"MONDO:0016879"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17p deletion","secondary_identifiers":["UMLS:C5679671","Orphanet:261965","MEDGEN:1842221","MESH:C538045","icd11.foundation:527787991","GARD:20817"],"synonyms":[{"name":"17p deletion","type":"related"},{"name":"17p monosomy","type":"related"},{"name":"17p- syndrome","type":"related"},{"name":"chromosome 17p deletion","type":"exact"},{"name":"chromosome 17p deletion syndrome","type":"related"},{"name":"del(17p)","type":"related"},{"name":"deletion 17p","type":"related"},{"name":"deletion 17p syndrome","type":"related"},{"name":"interstitial deletion 17p","type":"related"},{"name":"loss of chromosome 17p","type":"related"},{"name":"monosomy 17p","type":"related"},{"name":"partial deletion of chromosome 17p","type":"exact"},{"name":"partial deletion of the short arm of chromosome 17","type":"exact"},{"name":"partial monosomy 17p","type":"related"},{"name":"partial monosomy of chromosome 17p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 17","type":"exact"},{"name":"partial monosomy of the short arm of chromosome type 17","type":"exact"}],"termid":"MONDO:0022754","xrefs":{"Monarch":{"xref_id":"0022754"}}}


id: PBO:0048914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member I, pseudogene","termid":"PBO:0048914"}


id: PBO:0046838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 11","termid":"PBO:0046838"}


id: MONDO:0010699
data:
  {"annotated_genes":["SJAG_03811","SJAG_04882"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86537,86538],"is_not":false,"summary":null,"term":"MONDO:0010699"}]},"cv_name":"mondo","definition":"X-linked Charcot-Marie-Tooth disease type 5 is a rare, genetic, peripheral sensorimotor neuropathy characterized by an X-linked recessive inheritance pattern and the infancy- to childhood-onset of: 1) progressive distal muscle weakness and atrophy (first appearing and more prominent in the lower extremities than the upper) which usually manifests with foot drop and gait disturbance, 2) bilateral, profound, prelingual sensorineural hearing loss and 3) progressive optic neuropathy. Females are asymptomatic and do not display the phenotype.","definition_xrefs":["Orphanet:99014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type X","termid":"MONDO:0018994"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03811":null,"SJAG_04882":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease X-linked recessive 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1677","DOID:0110210","MEDGEN:374254","UMLS:C1839566","SCTID:763460007","GARD:114","OMIM:311070"],"synonyms":[{"name":"CMT5X","type":"exact"},{"name":"CMTX5","type":"exact"},{"name":"Charcot-Marie-Tooth disease X-linked recessive type 5","type":"exact"},{"name":"Charcot-Marie-Tooth disease, X-linked recessive, 5","type":"exact"},{"name":"Charcot-Marie-Tooth disease, X-linked recessive, 5, X-linked recessive","type":"exact"},{"name":"Charcot-Marie-Tooth disease, X-linked recessive, type 5","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy X type 5","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy X-linked recessive 5","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, X-linked recessive, 5","type":"exact"},{"name":"Rosenberg Chutorian Syndrome","type":"exact"},{"name":"Rosenberg-Chutorian syndrome","type":"exact"},{"name":"X-linked Charcot-Marie-Tooth disease type 5","type":"exact"},{"name":"familial opticoacoustic nerve degeneration and polyneuropathy","type":"exact"},{"name":"optic atrophy, polyneuropathy, and deafness","type":"exact"},{"name":"optic atrophy, sensorineural hearing loss and polyneuropathy","type":"exact"}],"termid":"MONDO:0010699","terms_by_termid":{"MONDO:0010699":null},"xrefs":{"Monarch":{"xref_id":"0010699"}}}


id: MONDO:0001728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Meniere disease","termid":"MONDO:0007972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active vestibular Meniere disease","secondary_identifiers":["MEDGEN:509991","SCTID:194350005","UMLS:C0155498","ICD9:386.03","DOID:13491"],"synonyms":[{"name":"active Meniere's disease, vestibular","type":"exact"},{"name":"active vestibular Meniere disease","type":"exact"},{"name":"active vestibular Meniere's disease","type":"exact"},{"name":"vestibular active Mnire's disease","type":"exact"}],"termid":"MONDO:0001728","xrefs":{"Monarch":{"xref_id":"0001728"}}}


id: GO:0015865
data:
  {"annotated_genes":["SJAG_00760","SJAG_04328","SJAG_02050","SJAG_00612","SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[63931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[101675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[101676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[58912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[58911,103169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[93247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The directed movement of a purine nucleotide, any compound consisting of a purine nucleoside esterified with (ortho)phosphate, into, out of or within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"purine nucleotide transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015865","terms_by_termid":{"GO:0015866":null,"GO:0140021":null,"GO:1903790":null,"GO:1990544":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null}}


id: GO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex that is located at the replication origins of a chromosome in the cytoplasm.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin recognition complex","termid":"GO:0000808"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic origin of replication recognition complex","synonyms":[{"name":"cytoplasmic ORC","type":"exact"},{"name":"prokaryotic ORC","type":"related"}],"termid":"GO:0000809"}


id: GO:1901841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of high voltage-gated calcium channel activity.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:12754254","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of voltage-gated calcium channel activity","termid":"GO:1901385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of high voltage-gated calcium channel activity","synonyms":[{"name":"regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"regulation of high voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:1901841"}


id: PBO:0073181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein K pseudogene 3","termid":"PBO:0073181"}


id: PBO:0088221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain","termid":"PBO:0088221"}


id: PBO:0056576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microspherule protein 1","termid":"PBO:0056576"}


id: PBO:0048237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 6","termid":"PBO:0048237"}


id: GO:0071773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bone morphogenetic protein (BMP) stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to BMP","termid":"GO:0071772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to BMP stimulus","synonyms":[{"name":"cellular response to bone morphogenetic protein stimulus","type":"exact"}],"termid":"GO:0071773"}


id: MONDO:0012623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 4","secondary_identifiers":["DOID:0081187","GARD:22547","MESH:C567008","UMLS:C1970179","MEDGEN:370844","OMIM:611107"],"synonyms":[{"name":"MRT4","type":"exact"},{"name":"intellectual disability, autosomal recessive 4","type":"exact"},{"name":"mental retardation, autosomal recessive 4","type":"related"},{"name":"mental retardation, autosomal recessive, 4","type":"exact"}],"termid":"MONDO:0012623","xrefs":{"Monarch":{"xref_id":"0012623"}}}


id: GO:0060493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesenchymal cell to an endodermal cell in the foregut and contributes to the formation of the lung bud.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inductive mesenchymal-endodermal cell signaling","termid":"GO:0060494"},{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling involved in lung development","termid":"GO:0060496"},{"relation_name":"is_a","term_name":"mesenchymal-endodermal cell signaling","termid":"GO:0060497"},{"relation_name":"part_of","term_name":"lung induction","termid":"GO:0060492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesenchymal-endodermal cell signaling involved in lung induction","synonyms":[{"name":"mesenchymal-endodermal cell signalling involved in lung induction","type":"exact"}],"termid":"GO:0060493"}


id: PBO:0070952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 7","termid":"PBO:0070952"}


id: PBO:0075437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member N2","termid":"PBO:0075437"}


id: GO:1900983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vindoline.","definition_xrefs":["PMID:23864440","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid indole alkaloid metabolic process","termid":"GO:0046447"},{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vindoline metabolic process","synonyms":[{"name":"vindoline metabolism","type":"exact"}],"termid":"GO:1900983"}


id: GO:0070062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.","definition_xrefs":["PMID:17641064","GOC:vesicles","PMID:24009894","PMID:19442504","PMID:15908444","GOC:BHF","PMID:22418571","PMID:19498381","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"extracellular exosome","synonyms":[{"name":"exosome","type":"exact"},{"name":"extracellular vesicular exosome","type":"exact"}],"termid":"GO:0070062"}


id: PBO:0047485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin 1 pseudogene 1","termid":"PBO:0047485"}


id: PBO:0058227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4517","termid":"PBO:0058227"}


id: MONDO:0017539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete postaxial polydactyly of toes, unilateral (obsolete MONDO:0017539)","secondary_identifiers":["Orphanet:295179"],"termid":"MONDO:0017539","xrefs":{"Monarch":{"xref_id":"0017539"}}}


id: PBO:0050209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 26","termid":"PBO:0050209"}


id: GO:0106375
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dNTP + H2O = 2'-deoxynucleoside + H+ + triphosphate.","definition_xrefs":["RHEA:46148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triphosphoric monoester hydrolase activity","termid":"GO:0016793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"deoxynucleoside triphosphate hydrolase activity","termid":"GO:0106375"}


id: PBO:0046245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL fatty acid elongase 2","termid":"PBO:0046245"}


id: PR:Q9US09
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A battenin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10981:SF0","PRO:DNx","OMA:SCHPO00846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein btn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.09c","secondary_identifiers":["UniProtKB:Q9US09"],"synonyms":[{"name":"Spom972h-CLN3","type":"exact"}],"termid":"PR:Q9US09"}


id: PBO:0055050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2465","termid":"PBO:0055050"}


id: PBO:0050864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ID2 antisense RNA 1","termid":"PBO:0050864"}


id: MONDO:0009005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lack of production of either functional C1r or C1s protein, due to a genetic defect. Approximately 60% of patients with a C1r/C1s deficiency will develop a severe systemic lupus erythematosus at an early age. Patients also present with frequent sinopulmonary infections often with Streptococcus pneumoniae.","definition_xrefs":["NCIT:C119991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"immunodeficiency due to a classical component pathway complement deficiency","termid":"MONDO:0015699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement component C1r/C1s deficiency","secondary_identifiers":["GARD:15155","UMLS:C3150274","icd11.foundation:448435460","MEDGEN:461624","OMIM:216950"],"synonyms":[{"name":"C1r/C1s deficiency","type":"related"},{"name":"complement component C1r/C1s deficiency","type":"exact"}],"termid":"MONDO:0009005","xrefs":{"Monarch":{"xref_id":"0009005"}}}


id: FYPO:0001561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-citrulline measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular citrulline level","synonyms":[{"name":"decreased cellular L-citrulline level","type":"exact"},{"name":"decreased cellular citrulline level during mitotic cell cycle","type":"related"},{"name":"decreased cellular citrulline level during vegetative growth","type":"exact"},{"name":"decreased citrulline accumulation","type":"related"},{"name":"reduced cellular citrulline level","type":"exact"}],"termid":"FYPO:0001561"}


id: GO:1905033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane repolarization during cardiac muscle cell action potential.","definition_xrefs":["GOC:BHF_miRNA","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:rph","GO_REF:0000058","PMID:23157812","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905031"},{"relation_name":"positively_regulates","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane repolarization during cardiac muscle cell action potential","synonyms":[{"name":"activation of membrane repolarization during cardiac muscle cell action potential","type":"narrow"},{"name":"up regulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1905033"}


id: MONDO:0013402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the NRL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 27","secondary_identifiers":["UMLS:C1834329","MESH:C563526","GARD:15700","OMIM:613750","MEDGEN:320323","DOID:0110397","ICD10CM:H35.5"],"synonyms":[{"name":"NRL retinitis pigmentosa","type":"exact"},{"name":"RP27","type":"exact"},{"name":"retinal Degeneration, autosomal recessive, Clumped pigment type","type":"related"},{"name":"retinitis pigmentosa 27","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in NRL","type":"exact"},{"name":"retinitis pigmentosa type 27","type":"exact"}],"termid":"MONDO:0013402","xrefs":{"Monarch":{"xref_id":"0013402"}}}


id: PBO:0084949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multigene complex, polymeric locus for maltose fermentation; encodes the MAL43 trans-acting MAL-activator, MAL41 maltose permease, and MAL42 maltase; on right arm of Chromosome XI, but not in strain S288C","termid":"PBO:0084949"}


id: PBO:0062297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 8","termid":"PBO:0062297"}


id: MONDO:0007909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial multiple lipomatosis is a rare, benign, genetic skin disease characterized by numerous, painless, encapsulated lipomas located in the subcutaneous adipose tissue of the trunk and extremities, with relative sparing of the neck and shoulders. Association with gastroduodenal lipomatosis, brain anomalies or lipomatosis, and refractory epilepsy has been reported.","definition_xrefs":["Orphanet:199276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system benign neoplasm","termid":"MONDO:0000652"},{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial multiple lipomatosis","secondary_identifiers":["ICD9:214.8","SCTID:766888002","GARD:12925","DOID:0070518","MESH:D000071070","MEDGEN:698553","UMLS:C1275273","ICD9:214.9","OMIM:151900"],"synonyms":[{"name":"lipoma","type":"related"},{"name":"lipomatosis, familial multiple","type":"related"},{"name":"lipomatosis, multiple","type":"related"}],"termid":"MONDO:0007909","xrefs":{"Monarch":{"xref_id":"0007909"}}}


id: GO:1900441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:1900440"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900742"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"narrow"}],"termid":"GO:1900441"}


id: PBO:0000615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase, URM1 activating enzyme (predicted)","termid":"PBO:0000615"}


id: PBO:0078772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-4","termid":"PBO:0078772"}


id: GO:2000461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of eukaryotic cell surface binding.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of eukaryotic cell surface binding (obsolete GO:2000461)","synonyms":[{"name":"negative regulation of eukaryotic cell surface binding","type":"exact"}],"termid":"GO:2000461"}


id: PBO:0091700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase","termid":"PBO:0091700"}


id: PBO:0068714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 3, pseudogene","termid":"PBO:0068714"}


id: GO:0030750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + putrescine = N-methylputrescine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:15037","EC:2.1.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"putrescine N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01153","MetaCyc:PUTRESCINE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:putrescine N-methyltransferase activity","type":"related"},{"name":"putrescine methyltransferase activity","type":"related"}],"termid":"GO:0030750"}


id: MONDO:0020262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nervous system anomaly with eye involvement (obsolete MONDO:0020262)","secondary_identifiers":["Orphanet:98692"],"termid":"MONDO:0020262","xrefs":{"Monarch":{"xref_id":"0020262"}}}


id: SO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The coding exon that is most 3-prime on a given transcript.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_exon","termid":"SO:0000195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_coding_exon","synonyms":[{"name":"3' coding exon","type":"related"},{"name":"three prime coding exon","type":"exact"}],"termid":"SO:0000202"}


id: GO:0005654
data:
  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id: FYPO:0000561
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id: MONDO:1010496
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id: PBO:0015260
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id: PBO:0046323
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id: PBO:0045647
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id: GO:0102692
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id: PBO:0044633
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id: PBO:0076157
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id: PBO:0073521
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id: GO:1900257
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id: PBO:0079619
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id: GO:0010619
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id: PBO:0062084
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id: PBO:0091591
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id: PBO:0077151
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id: PBO:0086754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; proper regulation of expression during heat stress is sphingolipid-dependent; mCherry fusion protein localizes to the vacuole; YOR186W has a paralog, YLR297W, that arose from the whole genome duplication","termid":"PBO:0086754"}


id: GO:0071981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in exit from diapause. Diapause is a neurohormonally mediated, dynamic state of low metabolic activity. Associated characteristics of this form of dormancy include reduced morphogenesis, increased resistance to environmental extremes, and altered or reduced behavioral activity. Full expression develops in a species-specific manner, usually in response to a number of environmental stimuli that precede unfavorable conditions. Once diapause has begun, metabolic activity is suppressed even if conditions favorable for development prevail. Once initiated, only certain stimuli are capable of releasing the organism from this state, and this characteristic is essential in distinguishing diapause from hibernation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit from diapause","termid":"GO:0071981"}


id: PBO:0005784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIF complex alpha subunit Tfg1 (predicted)","termid":"PBO:0005784"}


id: PBO:0061083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 2","termid":"PBO:0061083"}


id: GO:0033688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of osteoblast proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"osteoblast proliferation","termid":"GO:0033687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of osteoblast proliferation","termid":"GO:0033688"}


id: FYPO:0000415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic sister chromatid segregation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0000631","FYPO:0001985","FYPO:0000337","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitotic sister chromatid segregation","synonyms":[{"name":"chromosome segregation: decreased","type":"broad"},{"name":"decreased chromosome segregation during vegetative growth","type":"exact"},{"name":"decreased mitotic chromosome segregation","type":"exact"},{"name":"decreased sister chromatid segregation during mitotic cell cycle","type":"related"},{"name":"reduced mitotic sister chromatid segregation","type":"exact"}],"termid":"FYPO:0000415"}


id: MONDO:1012880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Motor neuron disease that occurs in sheep due to a mutation in the TMCO6 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"motor neuron disease, non-human animal","termid":"MONDO:1011868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motor neuron disease, TMCO6-related, sheep","secondary_identifiers":["OMIA:002370-9940"],"termid":"MONDO:1012880","xrefs":{"Monarch":{"xref_id":"1012880"}}}


id: PBO:0031447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0031447"}


id: GO:1904384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium phosphate stimulus.","definition_xrefs":["PMID:24625659","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to salt","termid":"GO:1902075"},{"relation_name":"is_a","term_name":"response to sodium phosphate","termid":"GO:1904383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sodium phosphate","termid":"GO:1904384"}


id: PBO:0047170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 3","termid":"PBO:0047170"}


id: PBO:0062264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily F member 1","termid":"PBO:0062264"}


id: GO:0102219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: n ATP + n H2O + a 6-phosphogluco-amylopectin = n AMP + n hydrogenphosphate + a 6-phosphogluco-3-phosphogluco-amylopectin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphogluco-amylopectin water dikinase activity (obsolete GO:0102219)","termid":"GO:0102219"}


id: MONDO:0007512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal dysplasia syndrome with distinctive facial appearance and preaxial polydactyly of feet","secondary_identifiers":["UMLS:C1851851","OMIM:129540","MEDGEN:342107","MESH:C565067"],"synonyms":[{"name":"ectodermal dysplasia syndrome with distinctive facial appearance and preaxial polydactyly of feet","type":"exact"}],"termid":"MONDO:0007512","xrefs":{"Monarch":{"xref_id":"0007512"}}}


id: SO:0100016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The central, hydrophobic region of the signal peptide (approx 7-15 aa).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"},{"relation_name":"part_of","term_name":"signal_peptide","termid":"SO:0000418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"central_hydrophobic_region_of_signal_peptide","synonyms":[{"name":"H-region","type":"related"},{"name":"central hydrophobic region of signal peptide","type":"exact"},{"name":"central_hydrophobic_region","type":"related"}],"termid":"SO:0100016"}


id: GO:0097532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["GOC:rl","PMID:19170886","Wikipedia:Acid","GOC:BHF","PMID:10615049","GOC:aa","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"},{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress response to acid chemical","synonyms":[{"name":"response to acid stress","type":"broad"},{"name":"stress response to acid","type":"broad"}],"termid":"GO:0097532"}


id: MONDO:0013837
data:
  {"annotated_genes":["SJAG_04568"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86651],"is_not":false,"summary":null,"term":"MONDO:0013837"}]},"cv_name":"mondo","definition":"Deafness-encephaloneuropathy-obesity-valvulopathy syndrome is a rare mitochondrial disease with marked clinical variability typically characterized by encephalomyopathy, kidney disease (nephrotic syndrome), optic atrophy, early-onset deafness, pancytopenia, obesity, and cardiac disease (valvulopathy). Additionally, macrocephaly, intellectual disability, hyperlactatemia, elevated lactate/pyruvate ratio, insulin-dependent diabetes, livedo reticularis, liver dysfunction and seizures have also been associated.","definition_xrefs":["Orphanet:254898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme Q10 deficiency","termid":"MONDO:0018151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"deafness-encephaloneuropathy-obesity-valvulopathy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3553354","DOID:0070239","GARD:17230","MEDGEN:766268","OMIM:614651"],"synonyms":[{"name":"COQ10D2","type":"related"},{"name":"coenzyme Q10 deficiency, primary, 2","type":"related"},{"name":"coenzyme Q10 deficiency, primary, type 2","type":"exact"},{"name":"hearing loss-encephaloneuropathy-obesity-valvulopathy syndrome","type":"exact"}],"termid":"MONDO:0013837","terms_by_termid":{"MONDO:0013837":null},"xrefs":{"Monarch":{"xref_id":"0013837"}}}


id: PBO:0076811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEN1 subunit of CST complex","termid":"PBO:0076811"}


id: PBO:0005382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp2 (predicted)","termid":"PBO:0005382"}


id: GO:0110028
data:
  {"annotated_genes":["SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic spindle organization.","definition_xrefs":["PMID:17576815","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"mitotic spindle organization","termid":"GO:0007052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"positive regulation of mitotic spindle organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110028","terms_by_termid":{"GO:0110161":null}}


id: FYPO:0006001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to P-bodies does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to P-bodies","synonyms":[{"name":"abolished protein localisation to P-bodies","type":"exact"},{"name":"abolished protein localization to P-bodies during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to P-bodies during vegetative growth","type":"exact"},{"name":"abolished protein localization to P-body","type":"exact"},{"name":"abolished protein localization to cytoplasmic P-bodies","type":"exact"},{"name":"protein localization to P-bodies abolished","type":"exact"}],"termid":"FYPO:0006001"}


id: PBO:0005904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamic acid, mitochondrial","termid":"PBO:0005904"}


id: GO:0030960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of two peptidyl-tyrosines to form a 3'-(O4'-L-tyrosinyl)-L-tyrosine protein cross-link.","definition_xrefs":["PDB:1NGK","RESID:AA0368","PMID:12719529"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3'-(O4'-L-tyrosinyl)-L-tyrosine (obsolete GO:0030960)","termid":"GO:0030960"}


id: PBO:0108595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG2 interacting ribosome maturation factor","termid":"PBO:0108595"}


id: PBO:0082604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cobalamin-independent methionine synthase; involved in methionine biosynthesis and regeneration; requires a minimum of two glutamates on the methyltetrahydrofolate substrate, similar to bacterial metE homologs","termid":"PBO:0082604"}


id: GO:0046566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the 4,5-ring opening reaction: 3,4-dihydroxyphenylalanine + O2 = 4,5-seco-DOPA. 4,5-seco-DOPA spontaneously recyclizes to form betalamic acid.","definition_xrefs":["PMID:11711071"],"gene_count":0,"genotype_count":0,"name":"obsolete DOPA dioxygenase activity (obsolete GO:0046566)","synonyms":[{"name":"dihydroxyphenylalanine dioxygenase activity","type":"exact"}],"termid":"GO:0046566"}


id: GO:0070248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell death by apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte apoptotic process","termid":"GO:0070229"},{"relation_name":"is_a","term_name":"regulation of natural killer cell apoptotic process","termid":"GO:0070247"},{"relation_name":"negatively_regulates","term_name":"natural killer cell apoptotic process","termid":"GO:0070246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell apoptotic process","synonyms":[{"name":"down regulation of natural killer cell apoptosis","type":"exact"},{"name":"down-regulation of natural killer cell apoptosis","type":"exact"},{"name":"downregulation of natural killer cell apoptosis","type":"exact"},{"name":"inhibition of natural killer cell apoptosis","type":"narrow"},{"name":"negative regulation of NK cell apoptosis","type":"exact"},{"name":"negative regulation of natural killer cell apoptosis","type":"narrow"}],"termid":"GO:0070248"}


id: PBO:0070509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 8","termid":"PBO:0070509"}


id: PBO:0074589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 5A","termid":"PBO:0074589"}


id: GO:0043751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (polyphosphate)n + AMP = (polyphosphate)n-1 + ADP.","definition_xrefs":["PMID:11237733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"polyphosphate:AMP phosphotransferase activity","synonyms":[{"name":"PAP","type":"exact"},{"name":"PPT","type":"broad"}],"termid":"GO:0043751"}


id: PBO:0070718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 23","termid":"PBO:0070718"}


id: PBO:0053931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1230","termid":"PBO:0053931"}


id: GO:0015966
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97335],"is_not":false,"summary":null,"term":"GO:0015966"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diadenosine tetraphosphate, a derivative of the nucleoside adenosine with four phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate biosynthetic process","termid":"GO:0015960"},{"relation_name":"is_a","term_name":"diadenosine tetraphosphate metabolic process","termid":"GO:0015965"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"diadenosine tetraphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine tetraphosphate anabolism","type":"exact"},{"name":"diadenosine tetraphosphate biosynthesis","type":"exact"},{"name":"diadenosine tetraphosphate formation","type":"exact"},{"name":"diadenosine tetraphosphate synthesis","type":"exact"}],"termid":"GO:0015966","terms_by_termid":{"GO:0015966":null}}


id: PBO:0077327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 63C","termid":"PBO:0077327"}


id: PBO:0050023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DP beta 1","termid":"PBO:0050023"}


id: FYPO:0003419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of malate dehydrogenase (decarboxylating) (NAD+) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal malate dehydrogenase (decarboxylating) (NAD+) activity","termid":"FYPO:0002621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased malate dehydrogenase (decarboxylating) (NAD+) activity","synonyms":[{"name":"increased 'malic' enzyme activity","type":"related"},{"name":"increased (S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"increased NAD-linked malic enzyme activity","type":"related"},{"name":"increased NAD-malic enzyme activity","type":"broad"},{"name":"increased NAD-specific malic enzyme activity","type":"related"},{"name":"increased malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"}],"termid":"FYPO:0003419"}


id: PBO:0063982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 16","termid":"PBO:0063982"}


id: GO:1900458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of brassinosteroid mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:21855796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of brassinosteroid mediated signaling pathway","termid":"GO:1900457"},{"relation_name":"negatively_regulates","term_name":"brassinosteroid mediated signaling pathway","termid":"GO:0009742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of brassinosteroid mediated signaling pathway","synonyms":[{"name":"down regulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"down regulation of brassinosteroid mediated signalling","type":"exact"},{"name":"down-regulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"down-regulation of brassinosteroid mediated signalling","type":"exact"},{"name":"downregulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"downregulation of brassinosteroid mediated signalling","type":"exact"},{"name":"inhibition of brassinosteroid mediated signaling pathway","type":"narrow"},{"name":"inhibition of brassinosteroid mediated signalling","type":"exact"},{"name":"negative regulation of brassinosteroid mediated signalling","type":"exact"}],"termid":"GO:1900458"}


id: MONDO:0001848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of hypermature cataract formed by liquefaction of the cortex and sinking of the dense nucleus to the bottom of the capsular bag.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"senile cataract","termid":"MONDO:0004847"},{"relation_name":"is_a","term_name":"hypermature cataract","termid":"MONDO:0045049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Morgagni cataract","secondary_identifiers":["ICD9:366.18","DOID:13964","UMLS:C0152258","SCTID:264443002","MEDGEN:508950"],"synonyms":[{"name":"Morgagnian cataract","type":"exact"},{"name":"hypermature cataract","type":"broad"}],"termid":"MONDO:0001848","xrefs":{"Monarch":{"xref_id":"0001848"}}}


id: GO:1900577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gerfelin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"gerfelin metabolic process","termid":"GO:1900576"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"gerfelin catabolic process","synonyms":[{"name":"gerfelin breakdown","type":"exact"},{"name":"gerfelin catabolism","type":"exact"},{"name":"gerfelin degradation","type":"exact"}],"termid":"GO:1900577"}


id: RO:0002626
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kills","termid":"RO:0002626"}


id: PBO:0000115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIP water channel (predicted)","termid":"PBO:0000115"}


id: PBO:0064475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase gamma, catalytic subunit","termid":"PBO:0064475"}


id: PBO:0055268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2695","termid":"PBO:0055268"}


id: PBO:0017929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tricarboxylic acid transmembrane transporter (predicted)","termid":"PBO:0017929"}


id: PBO:0036109
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2B-K119_ubiquitination_during_vegetative_growth","termid":"PBO:0036109"}


id: PBO:0004397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ste13","termid":"PBO:0004397"}


id: MONDO:0002318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the trachea. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign neoplasm of trachea","termid":"MONDO:0021517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trachea leiomyoma","secondary_identifiers":["UMLS:C1336772","NCIT:C6049","DOID:248","SCTID:126703006","MEDGEN:237015"],"synonyms":[{"name":"leiomyoma of the trachea","type":"exact"},{"name":"leiomyoma of trachea","type":"exact"},{"name":"trachea leiomyoma","type":"exact"},{"name":"trachea neoplasm","type":"broad"},{"name":"tracheal leiomyoma","type":"exact"},{"name":"tracheal neoplasm","type":"broad"},{"name":"tracheal tumor","type":"broad"},{"name":"tracheal tumour","type":"broad"}],"termid":"MONDO:0002318","xrefs":{"Monarch":{"xref_id":"0002318"}}}


id: MONDO:0008551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A short-rib dysplasia characterized by thoracic dystrophy, laryngeal stenosis and a small pelvis.","definition_xrefs":["Orphanet:3317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thoracolaryngopelvic dysplasia","secondary_identifiers":["OMIM:187760","GARD:5184","icd11.foundation:337990406","MESH:C536517","OMIM:187770","SCTID:723556008","UMLS:C1861197","MEDGEN:349978"],"synonyms":[{"name":"Barnes syndrome","type":"exact"},{"name":"TLPD","type":"related"},{"name":"autosomal dominant thoracolaryngopelvic dysplasia","type":"related"},{"name":"thoracolaryngopelvic dysplasia","type":"exact"},{"name":"thoracopelvic dysostosis","type":"exact"}],"termid":"MONDO:0008551","xrefs":{"Monarch":{"xref_id":"0008551"}}}


id: PBO:0061909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily AA member 1 pseudogene","termid":"PBO:0061909"}


id: FYPO:0009033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of dihydrocoumarin than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to dihydrocoumarin","synonyms":[{"name":"resistance to dihydrocoumarin during mitotic cell cycle","type":"related"},{"name":"resistance to dihydrocoumarin during vegetative growth","type":"exact"},{"name":"resistant to dihydrocoumarin","type":"exact"}],"termid":"FYPO:0009033"}


id: PBO:0054292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1683","termid":"PBO:0054292"}


id: PBO:0017528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF5, Tif5(predicted)","termid":"PBO:0017528"}


id: FYPO:0006384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of endocytosis is decreased when the cell is subject to nitrogen starvation. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis","termid":"FYPO:0003886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of endocytosis during nitrogen starvation","synonyms":[{"name":"decreased rate of actin-mediated endocytosis during nitrogen starvation","type":"exact"},{"name":"decreased rate of endocytosis during nitrogen depletion","type":"exact"},{"name":"decreased rate of endocytosis during nitrogen deprivation","type":"exact"},{"name":"decreased rate of protein internalization during nitrogen starvation","type":"narrow"},{"name":"reduced rate of endocytosis during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006384"}


id: MONDO:0800153
data:
  {"annotated_genes":["SJAG_03266","SJAG_03398","SJAG_00412","SJAG_04577","SJAG_01461","SJAG_00635","SJAG_00695","SJAG_00392","SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008815"},{"annotations":[85411,85412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009376"},{"annotations":[87411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008988"},{"annotations":[85408,85407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009377"},{"annotations":[86061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008814"},{"annotations":[87173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"},{"annotations":[87382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010703"}]},"cv_name":"mondo","definition":"A disorder of amino acid metabolism that has its basis in the disruption of the urea cycle or an inherited hyperammonemia (any specific disease which causes an inherited increased concentration of ammonia in the blood).","direct_ancestors":[{"relation_name":"is_a","term_name":"urea cycle disorder","termid":"MONDO:0004739"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01461":null,"SJAG_03266":null,"SJAG_03398":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"urea cycle disorder or inherited hyperammonemia","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800153","terms_by_termid":{"MONDO:0008814":null,"MONDO:0008815":null,"MONDO:0008988":null,"MONDO:0009376":null,"MONDO:0009377":null,"MONDO:0010703":null,"MONDO:0011717":null},"xrefs":{"Monarch":{"xref_id":"0800153"}}}


id: GO:0034454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell by attachment to a centrosome.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule anchoring at microtubule organizing center","termid":"GO:0072393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"microtubule anchoring at centrosome","termid":"GO:0034454"}


id: MOD:00849
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a potassium atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium containing modified residue","synonyms":[{"name":"KRes","type":"exact"}],"termid":"MOD:00849"}


id: MONDO:0019751
data:
  {"annotated_genes":["SJAG_00321","SJAG_02763","SJAG_03151","SJAG_04118","SJAG_04541","SJAG_00853","SJAG_05239","SJAG_04380","SJAG_04290","SJAG_01884","SJAG_03596","SJAG_04865","SJAG_00400","SJAG_02039","SJAG_01474","SJAG_04969","SJAG_04569","SJAG_04077","SJAG_03805"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012429"},{"annotations":[85529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"},{"annotations":[85532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"},{"annotations":[85618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"},{"annotations":[87625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014629"},{"annotations":[87580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013944"},{"annotations":[86379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007483"},{"annotations":[86998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"},{"annotations":[87101,87102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[86244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012316"},{"annotations":[85427,85426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[87097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054698"},{"annotations":[86908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054700"},{"annotations":[85781,85782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054699"},{"annotations":[85481,85482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011462"},{"annotations":[86782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[86633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"},{"annotations":[86250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026777"},{"annotations":[86000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010523"}]},"cv_name":"mondo","definition":"A group of disorders of the innate immune system characterized by attacks of seemingly unprovoked inflammation without significant levels of either autoantibodies or autoreactive T cells more characteristic of autoimmune disease.","definition_xrefs":["PMID:23827249","NCIT:C119050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_00400":null,"SJAG_00853":null,"SJAG_01474":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_02763":null,"SJAG_03151":null,"SJAG_03596":null,"SJAG_03805":null,"SJAG_04077":null,"SJAG_04118":null,"SJAG_04290":null,"SJAG_04380":null,"SJAG_04541":null,"SJAG_04569":null,"SJAG_04865":null,"SJAG_04969":null,"SJAG_05239":null},"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3890737","NANDO:2100156","GARD:19234","MedDRA:10072220","MEDGEN:855741","Orphanet:93665","ICD10CM:M04-M04"],"termid":"MONDO:0019751","terms_by_termid":{"MONDO:0007483":null,"MONDO:0009849":null,"MONDO:0010523":null,"MONDO:0011462":null,"MONDO:0012316":null,"MONDO:0012429":null,"MONDO:0012471":null,"MONDO:0012472":null,"MONDO:0012481":null,"MONDO:0013766":null,"MONDO:0013818":null,"MONDO:0013944":null,"MONDO:0014007":null,"MONDO:0014629":null,"MONDO:0024541":null,"MONDO:0026777":null,"MONDO:0054698":null,"MONDO:0054699":null,"MONDO:0054700":null},"xrefs":{"Monarch":{"xref_id":"0019751"}}}


id: GO:1901581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of telomeric RNA transcription from RNA pol II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of telomeric RNA transcription from RNA pol II promoter (obsolete GO:1901581)","synonyms":[{"name":"down regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"down regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"down-regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"down-regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"downregulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"downregulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"inhibition of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"inhibition of telomeric RNA transcription from RNA pol II promoter","type":"narrow"},{"name":"negative regulation of telomeric RNA transcription from Pol II promoter","type":"exact"}],"termid":"GO:1901581"}


id: PBO:0076817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM3 antisense RNA 1","termid":"PBO:0076817"}


id: PATO:0001681
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality that inheres in a homogeneous substance containing 6.02 x 1023 atoms or molecules.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Molar_mass"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mass","termid":"PATO:0000125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molar mass","termid":"PATO:0001681"}


id: PBO:0058703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6831","termid":"PBO:0058703"}


id: GO:0102123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A4 + O2 + H+ + NAD(P)H = 16alpha,17-epoxy gibberellin A4 + H2O + NAD(P).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A4 16alpha,17 epoxidase activity (obsolete GO:0102123)","termid":"GO:0102123"}


id: MONDO:0000599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A learning disability that involves impaired written language ability such as impairments in handwriting, spelling, organization of ideas, and composition.","definition_xrefs":["DOID:0060047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning disability","termid":"MONDO:0004681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"writing disorder","secondary_identifiers":["MEDGEN:1843493","UMLS:C0860614"],"termid":"MONDO:0000599","xrefs":{"Monarch":{"xref_id":"0000599"}}}


id: MONDO:0002795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system embryonal tumor, not otherwise specified that occurs in adults.","definition_xrefs":["NCIT:C5411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system primitive neuroectodermal neoplasm","termid":"MONDO:0000640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult central nervous system primitive neuroectodermal neoplasm","secondary_identifiers":["UMLS:C1332196","DOID:3865","MEDGEN:231039"],"synonyms":[{"name":"adult CNS PNET","type":"exact"},{"name":"adult CNS primitive neuroectodermal neoplasm","type":"exact"},{"name":"adult CNS primitive neuroectodermal tumor","type":"exact"},{"name":"adult CNS primitive neuroectodermal tumour","type":"exact"},{"name":"adult central nervous system primitive neuroectodermal neoplasm","type":"exact"},{"name":"adult central nervous system primitive neuroectodermal tumor","type":"exact"},{"name":"adult central nervous system primitive neuroectodermal tumour","type":"exact"},{"name":"adult central primitive neuroectodermal neoplasm","type":"exact"},{"name":"adult central primitive neuroectodermal tumor","type":"exact"},{"name":"adult central primitive neuroectodermal tumour","type":"exact"},{"name":"central nervous system primitive neuroectodermal neoplasm of adults","type":"exact"}],"termid":"MONDO:0002795","xrefs":{"Monarch":{"xref_id":"0002795"}}}


id: PBO:0069550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 821, pseudogene","termid":"PBO:0069550"}


id: _global:gained
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X gained Y if X is a variant_of X' and Y part of X but not X'.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gained","termid":"_global:gained"}


id: PBO:0113426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Selective autophagy receptor involved in aggrephagy and proteaphagy; ubiquitin (Ub)-binding protein that functions as a Ub-Atg8p adaptor in Ub-dependent autophagy; serves as a proteaphagy receptor for inactivate 26S proteasomes; contains a CUE domain that binds K48-and K63-linked Ub chains and monoubiquitin, facilitating intramolecular monoubiquitination; human TOLLIP is a functional CUE-domain homolog, that complements a null mutant, rescuing the hypersensitivity of the null mutant to Htt-96Q","termid":"PBO:0113426"}


id: FYPO:0006147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA transcribed from early meiotic genes measured in a cell is lower than normal during a cellular response to copper ion starvation during the meiotic cell cycle. Early meiotic genes are normally transcribed during pre-meiotic S phase and recombination.","definition_xrefs":["PMID:24569997","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of early meiotic gene mRNA during cellular response to copper ion starvation during meiotic cell cycle","synonyms":[{"name":"decreased level of early meiosis gene mRNA during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"},{"name":"decreased level of early meiotic gene RNA during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"},{"name":"decreased level of early meiotic gene transcripts during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006147"}


id: PBO:0038450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0038450"}


id: PBO:0084649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor CTP synthase isozyme (see also URA7); catalyzes the ATP-dependent transfer of the amide nitrogen from glutamine to UTP, forming CTP, the final step in de novo biosynthesis of pyrimidines; involved in phospholipid biosynthesis; capable of forming cytoplasmic filaments termed cytoophidium, especially during conditions of glucose depletion; URA8 has a paralog, URA7, that arose from the whole genome duplication","termid":"PBO:0084649"}


id: GO:0018221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent attachment of a palmitoyl group to an oxygen (O) atom in a serine residue to form peptidyl-O-palmitoyl-L-serine.","definition_xrefs":["RESID:AA0080"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine palmitoylation (obsolete GO:0018221)","synonyms":[{"name":"peptidyl-serine O-palmitoylation","type":"exact"}],"termid":"GO:0018221"}


id: PBO:0057992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3916","termid":"PBO:0057992"}


id: PBO:0063440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE6B antisense RNA 1","termid":"PBO:0063440"}


id: GO:0033025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"regulates","term_name":"mast cell apoptotic process","termid":"GO:0033024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell apoptotic process","synonyms":[{"name":"regulation of mast cell apoptosis","type":"narrow"}],"termid":"GO:0033025"}


id: GO:0008650
data:
  {"annotated_genes":["SJAG_03773","SJAG_03332","SJAG_00722"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75962,76281,79107],"is_not":false,"summary":null,"term":"GO:0008650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a uridine in rRNA + S-adenosyl-L-methionine = a 2'-O-methyluridine in rRNA + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:54152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (uridine) methyltransferase activity","termid":"GO:0016436"},{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_03332":null,"SJAG_03773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"rRNA (uridine-2'-O-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6793127"],"termid":"GO:0008650","terms_by_termid":{"GO:0008650":null}}


id: GO:0080158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a chloroplast ribulose bisphosphate carboxylase (RubisCO) complex. Includes the synthesis of the constituent protein molecules, and those protein modifications that are involved in synthesis or assembly of the complex.","definition_xrefs":["PMID:20561259"],"gene_count":0,"genotype_count":0,"name":"obsolete chloroplast ribulose bisphosphate carboxylase complex biogenesis (obsolete GO:0080158)","termid":"GO:0080158"}


id: PBO:0075368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 6","termid":"PBO:0075368"}


id: PBO:0062190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily Q member 2 (gene/pseudogene)","termid":"PBO:0062190"}


id: PBO:0002873
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.-","termid":"PBO:0002873"}


id: FYPO:0007635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 16 of histone H4 in regions containing protein coding genes occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K16 acetylation during vegetative growth","termid":"FYPO:0007632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H4-K16 acetylation at protein coding gene during vegetative growth","synonyms":[{"name":"increased histone H4-K16 acetylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"increased histone H4K16 acetylation at protein coding gene during vegetative growth","type":"exact"},{"name":"increased histone H4K16 acetylation at protein-coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007635"}


id: GO:0061486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fructose from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["PMID:10735857","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"high-affinity fructose transmembrane transporter activity","synonyms":[{"name":"high affinity fructose transmembrane transporter activity","type":"exact"}],"termid":"GO:0061486"}


id: MONDO:0016050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thiamine-responsive encephalopathy (obsolete MONDO:0016050)","termid":"MONDO:0016050","xrefs":{"Monarch":{"xref_id":"0016050"}}}


id: PBO:0045400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 2","termid":"PBO:0045400"}


id: PBO:0082097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"73 kDa subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; relocates to the cytosol under hypoxic conditions; deletion mutants are temperature-sensitive; SNF12 has a paralog, RSC6, that arose from the whole genome duplication","termid":"PBO:0082097"}


id: PBO:0000454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DHHC type","termid":"PBO:0000454"}


id: GO:0050164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + CoA + NADP+ = CO2 + NADPH + succinyl-CoA.","definition_xrefs":["RHEA:21400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxoglutarate dehydrogenase [NAD(P)+] activity","termid":"GO:0034601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxoglutarate dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.2.1.52","KEGG_REACTION:R00265","MetaCyc:OXOGLUTARATE-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"2-oxoglutarate:NADP+ 2-oxidoreductase (CoA-succinylating)","type":"related"}],"termid":"GO:0050164"}


id: GO:0009154
data:
  {"annotated_genes":["SJAG_06622","SJAG_05314","SJAG_02481","SJAG_04870","SJAG_02135","SJAG_04048","SJAG_00839","SJAG_00461","SJAG_03660","SJAG_04495","SJAG_02785","SJAG_02107","SJAG_03828","SJAG_02945","SJAG_02009","SJAG_02369","SJAG_03373","SJAG_03903","SJAG_00027","SJAG_02796","SJAG_00605","SJAG_00685","SJAG_04192","SJAG_06621","SJAG_01310","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[116680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[78210,95352,109697,106147,116652,103954,98590,105777,109702,109698,105776,109701,109699,105778,109703,103698,109700,106146,94863,98318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[76377,73408],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[70420],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a purine ribonucleotide, a compound consisting of ribonucleoside (a purine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"},{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"ribonucleotide catabolic process","termid":"GO:0009261"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleotide breakdown","type":"exact"},{"name":"purine ribonucleotide catabolism","type":"exact"},{"name":"purine ribonucleotide degradation","type":"exact"}],"termid":"GO:0009154","terms_by_termid":{"GO:0006110":null,"GO:0006198":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:1901911":null}}


id: PBO:0038361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-parasitoid_of","termid":"PBO:0038361"}


id: GO:0021979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The differentiation of cells that will contribute to the structure and function of the hypothalamus.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","GOC:jid","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"hypothalamus development","termid":"GO:0021854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus cell differentiation","termid":"GO:0021979"}


id: GO:1903982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases the length of a microvillus.","definition_xrefs":["PMID:22114352","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of microvillus length","termid":"GO:0032532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microvillus length","synonyms":[{"name":"down regulation of regulation of microvillus length","type":"exact"},{"name":"down-regulation of regulation of microvillus length","type":"exact"},{"name":"downregulation of regulation of microvillus length","type":"exact"},{"name":"inhibition of regulation of microvillus length","type":"narrow"}],"termid":"GO:1903982"}


id: PBO:0048146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 6 pseudogene 2","termid":"PBO:0048146"}


id: MOD:00116
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-diacylglycerol-L-cysteine.","definition_xrefs":["PubMed:4575979","PubMed:9056182","Unimod:377#C","PubMed:10896212","RESID:AA0107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"},{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:01155","MOD:00905"],"is_obsolete":false,"name":"S-diacylglycerol-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-[(2S)-2-((9Z)-9-octadecenoyloxy)-3-(hexadecanoyloxy)propyl]sulfanylpropanoic acid","type":"exact"},{"name":"2-amino-3-[(S)-2-((Z)-9-octadecenoyloxy)-3-(hexadecanoyloxy)propyl]thiopropanoic acid","type":"exact"},{"name":"Diacylglycerol","type":"related"},{"name":"LIPID S-diacylglycerol cysteine","type":"exact"},{"name":"S-(1-2'-oleoyl-3'-palmitoyl-glycerol)cysteine","type":"exact"},{"name":"S-(2',3'-diacylglycerol)-L-cysteine","type":"exact"},{"name":"S-diacylglycerol-L-cysteine","type":"exact"},{"name":"SAcyl2GlyceroCys","type":"exact"},{"name":"diacylglycerol","type":"related"}],"termid":"MOD:00116"}


id: PBO:0055961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 74B","termid":"PBO:0055961"}


id: GO:0070984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SET domain of a protein. SET domains are named after three Drosophila proteins that contain this domain: Su(var), E(z) and trithorax. SET domains are associated with histone lysine methylation.","definition_xrefs":["Pfam:PF00856","GOC:sart","PMID:12575990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"SET domain binding","synonyms":[{"name":"SET binding","type":"exact"}],"termid":"GO:0070984"}


id: GO:0061699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of a glutaryl group (CO-CH2-CH2--CH2-CO) from a glutarylated lysine residue in a peptide or protein.","definition_xrefs":["GOC:dph","PMID:24703693"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine deglutarylation (obsolete GO:0061699)","termid":"GO:0061699"}


id: GO:0046171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of octanol, the 8-carbon alcohol with the formula C8H17OH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octanol metabolic process","termid":"GO:0006070"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"fatty alcohol biosynthetic process","termid":"GO:1903175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"octanol biosynthetic process","synonyms":[{"name":"octanol anabolism","type":"exact"},{"name":"octanol biosynthesis","type":"exact"},{"name":"octanol formation","type":"exact"},{"name":"octanol synthesis","type":"exact"}],"termid":"GO:0046171"}


id: PBO:0083425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YAL027W and the verified gene DRS2","termid":"PBO:0083425"}


id: PBO:0066190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 12","termid":"PBO:0066190"}


id: MONDO:1012747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any canine hereditary ataxia that occurs in dogs due to a mutation in the RAB24 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary ataxia, non-human animal","termid":"MONDO:1012959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine hereditary ataxia, RAB24-related, dog","secondary_identifiers":["OMIA:001913-9615"],"synonyms":[{"name":"ataxia, cerebellar, juvenile to adolescent, RAB24-related, dog","type":"exact"},{"name":"canine hereditary ataxia","type":"related"}],"termid":"MONDO:1012747","xrefs":{"Monarch":{"xref_id":"1012747"}}}


id: MONDO:0014083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal agammaglobulinemia in which the cause of the disease is a mutation in the PIK3R1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal agammaglobulinemia","termid":"MONDO:0011096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"agammaglobulinemia 7, autosomal recessive","secondary_identifiers":["MEDGEN:767603","GARD:15918","UMLS:C3554689","DOID:0081139","OMIM:615214"],"synonyms":[{"name":"AGM7","type":"related"},{"name":"PIK3R1 autosomal agammaglobulinemia","type":"exact"},{"name":"agammaglobulinemia 7, autosomal recessive","type":"exact"},{"name":"agammaglobulinemia, autosomal recessive, due to PIK3R1 defect","type":"related"},{"name":"autosomal agammaglobulinemia caused by mutation in PIK3R1","type":"exact"}],"termid":"MONDO:0014083","xrefs":{"Monarch":{"xref_id":"0014083"}}}


id: GO:0033717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + acceptor = 2-dehydro-D-gluconate + reduced acceptor.","definition_xrefs":["RHEA:12769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gluconate dehydrogenase activity","termid":"GO:0008875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"gluconate 2-dehydrogenase (acceptor) activity","secondary_identifiers":["MetaCyc:GLUCONATE-2-DEHYDROGENASE-RXN","EC:1.1.99.3"],"synonyms":[{"name":"2-ketogluconate reductase activity","type":"broad"},{"name":"D-gluconate dehydrogenase activity","type":"related"},{"name":"D-gluconate dehydrogenase, 2-keto-D-gluconate-yielding activity","type":"related"},{"name":"D-gluconate:(acceptor) 2-oxidoreductase activity","type":"related"},{"name":"D-gluconate:acceptor 2-oxidoreductase activity","type":"related"},{"name":"gluconate oxidase activity","type":"related"},{"name":"gluconic acid dehydrogenase activity","type":"related"},{"name":"gluconic dehydrogenase activity","type":"related"}],"termid":"GO:0033717"}


id: FYPO:0004037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to mercury ions is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during cellular response to mercury ion","synonyms":[{"name":"decreased protein accumulation during cellular response to mercury ion","type":"related"},{"name":"decreased protein level during cellular response to mercury","type":"exact"},{"name":"decreased protein level during cellular response to mercury ion during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to mercury ion during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to mercury ion","type":"exact"}],"termid":"FYPO:0004037"}


id: PBO:0036499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get2","termid":"PBO:0036499"}


id: GO:0042583
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specialized secretory vesicle found in the cells of adrenal glands and various other organs, which is concerned with the synthesis, storage, metabolism, and secretion of epinephrine and norepinephrine.","definition_xrefs":["PMID:19158310","PMID:1961743","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"chromaffin granule","termid":"GO:0042583"}


id: PomGeneEx:0000026
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRD","definition":"A qualifier that indicates that the fraction of ribosomes that are translating each codon of an mRNA is higher under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah","PMID:29432178","PMID:33313903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased","termid":"PomGeneEx:0000002"},{"relation_name":"is_a","term_name":"ribosomal density","termid":"PomGeneEx:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal density increased","synonyms":[{"name":"increased ribosomal density","type":"exact"},{"name":"ribosome density increased","type":"exact"},{"name":"ribosome occupancy increased","type":"exact"}],"termid":"PomGeneEx:0000026"}


id: GO:0048660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle cell proliferation.","definition_xrefs":["GOC:ebc","CL:0000192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"smooth muscle cell proliferation","termid":"GO:0048659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle cell proliferation","synonyms":[{"name":"regulation of SMC proliferation","type":"exact"}],"termid":"GO:0048660"}


id: PBO:0087504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of GPI-GlcNAc transferase involved in synthesis of GlcNAc-PI; N-acetylglucosaminyl phosphatidylinositol (GlcNAc-PI) is the first intermediate in glycosylphosphatidylinositol (GPI) anchor synthesis; shares similarity with mammalian PIG-P","termid":"PBO:0087504"}


id: PBO:0064521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit B","termid":"PBO:0064521"}


id: PBO:0048794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha o1","termid":"PBO:0048794"}


id: PBO:0070131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 45 pseudogene","termid":"PBO:0070131"}


id: MONDO:0015619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A urogenital tract malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic urogenital tract malformation (obsolete MONDO:0015619)","secondary_identifiers":["Orphanet:165704"],"synonyms":[{"name":"isolated urogenital tract malformation","type":"exact"},{"name":"nonsyndromic urogenital tract malformation","type":"exact"}],"termid":"MONDO:0015619","xrefs":{"Monarch":{"xref_id":"0015619"}}}


id: MONDO:0005092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive, poorly differentiated invasive adenocarcinoma characterized by the presence of malignant glandular cells in which the nucleus is pressed to one side by the presence of intracytoplasmic mucus. It may arise from the stomach, small and large intestine, ampulla of Vater, appendix, gallbladder, pancreas, lung, bladder, breast, and prostate gland.","definition_xrefs":["NCIT:C3774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"signet ring cell carcinoma","secondary_identifiers":["MESH:D018279","MEDGEN:61663","DOID:3493","ICDO:8490/3","UMLS:C0206696","EFO:0000698"],"synonyms":[{"name":"signet ring carcinoma","type":"exact"},{"name":"signet ring carcinoma NOS (morphologic abnormality)","type":"exact"},{"name":"signet ring cell adenocarcinoma","type":"exact"},{"name":"signet ring cell carcinoma","type":"exact"},{"name":"signet ring cell carcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0005092","xrefs":{"Monarch":{"xref_id":"0005092"}}}


id: PR:Q9USY4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abp2 gene.","definition_xrefs":["UniProtKB:Q9USY4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARS-binding protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.02","synonyms":[{"name":"Spom972h-abp2","type":"exact"}],"termid":"PR:Q9USY4"}


id: GO:0110035
data:
  {"annotated_genes":["SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102598],"is_not":false,"summary":null,"term":"GO:0110035"}]},"cv_name":"molecular_function","definition":"The activity of binding selectively, and in a sequence-specific manner, a replication fork barrier found in rDNA spacers, and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.","definition_xrefs":["PMID:27035982","GOC:al","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rDNA spacer replication fork barrier binding","termid":"GO:0043110"},{"relation_name":"is_a","term_name":"sequence-specific DNA binding, bending","termid":"GO:0044374"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"rDNA spacer replication fork barrier binding, bending","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110035","terms_by_termid":{"GO:0110035":null}}


id: GO:0070523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD+ = an 11-oxosteroid + NADH + H+.","definition_xrefs":["PMID:15761036","RHEA:53116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"11-beta-hydroxysteroid dehydrogenase [NAD(P)+] activity","termid":"GO:0003845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"11-beta-hydroxysteroid dehydrogenase (NAD+) activity","secondary_identifiers":["Wikipedia:11beta-hydroxysteroid_dehydrogenase"],"termid":"GO:0070523"}


id: PR:Q09794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CAD protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00290","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ura1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.06c","secondary_identifiers":["UniProtKB:Q09794"],"synonyms":[{"name":"Spom972h-CAD","type":"exact"}],"termid":"PR:Q09794"}


id: GO:0120099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as a chaperone or scaffold for centriolar proteins during the maturation of the procentriole. Some of its members may become integrated into the growing centriole. Examples are the CPAP(CENPJ)-STIL complex, CEP192-PLK4 complex or CEP152-PLK4 complex in vertebrates.","definition_xrefs":["PMID:21059844","PMID:22020124","PMID:24997597","GOC:bhm","PMID:17576815","PMID:18207742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"procentriole replication complex","termid":"GO:0120099"}


id: PBO:0052870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-14, pseudogene","termid":"PBO:0052870"}


id: GO:0070621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the epidermal growth factor receptor (EGFR), Grb2, the adaptor protein SHC and the guanine nucleotide exchange factor Sos (or an ortholog thereof, such as mSos1), and is involved in linking EGFR activation to the p21-Ras pathway.","definition_xrefs":["PMID:8940013","GOC:mah","PMID:7798267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"EGFR-Shc-Grb2-Sos complex","termid":"GO:0070621"}


id: PBO:0071589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 6","termid":"PBO:0071589"}


id: GO:0033842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acetyl-beta-D-glucosaminyl derivative + UDP-N-acetyl-alpha-D-galactosamine = an N-acetyl-beta-D-galactosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + UDP + H+.","definition_xrefs":["RHEA:20493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acetyl-beta-glucosaminyl-derivative 4-beta-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["EC:2.4.1.244","MetaCyc:2.4.1.244-RXN"],"synonyms":[{"name":"N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity","type":"exact"},{"name":"UDP-N-acetyl-D-galactosamine:N-acetyl-D-glucosaminyl-group beta-1,4-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"beta1,4-N-acetylgalactosaminyltransferase III activity","type":"related"},{"name":"beta1,4-N-acetylgalactosaminyltransferase IV activity","type":"related"},{"name":"beta1,4-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"beta4GalNAc-T3","type":"related"},{"name":"beta4GalNAc-T4","type":"related"}],"termid":"GO:0033842"}


id: PBO:0070954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 9","termid":"PBO:0070954"}


id: PATO:0002449
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and mid-line surface of an organism relative to another entity.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior to","termid":"PATO:0001633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posteromedial to","termid":"PATO:0002449"}


id: PR:O13960
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecm33 gene.","definition_xrefs":["UniProtKB:O13960","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein ecm33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1705.03c","synonyms":[{"name":"Spom972h-ecm33","type":"exact"}],"termid":"PR:O13960"}


id: FYPO:0002706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cordycepin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to cordycepin","synonyms":[{"name":"resistance to cordycepin during mitotic cell cycle","type":"related"},{"name":"resistance to cordycepin during vegetative growth","type":"exact"},{"name":"resistant to cordycepin","type":"exact"}],"termid":"FYPO:0002706"}


id: PBO:0055813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipin 1","termid":"PBO:0055813"}


id: GO:0080140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving jasmonic acid.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"regulates","term_name":"jasmonic acid metabolic process","termid":"GO:0009694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of jasmonic acid metabolic process","termid":"GO:0080140"}


id: PBO:0060095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 42","termid":"PBO:0060095"}


id: PBO:0071603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 20","termid":"PBO:0071603"}


id: PBO:0058829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8059","termid":"PBO:0058829"}


id: PBO:0052224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 2","termid":"PBO:0052224"}


id: PBO:0086400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative divalent metal ion transporter involved in iron homeostasis; transcriptionally regulated by metal ions; member of the Nramp family of metal transport proteins; protein abundance increases in response to DNA replication stress","termid":"PBO:0086400"}


id: MONDO:0003268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor composed of two or more glial cell types (astrocytes, ependymal cells, and oligodendrocytes).","definition_xrefs":["NCIT:C3903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed glioma","secondary_identifiers":["SCTID:443937008","MEDGEN:75477","DOID:5076","UMLS:C0259783","ICDO:9382/3"],"synonyms":[{"name":"glioma, mixed","type":"exact"},{"name":"glioma, mixed, malignant","type":"exact"},{"name":"mixed glial neoplasm","type":"exact"},{"name":"mixed glial tumor","type":"exact"},{"name":"mixed glial tumour","type":"exact"},{"name":"mixed glioma","type":"exact"},{"name":"mixed glioma (morphologic abnormality)","type":"exact"},{"name":"mixed gliomas","type":"exact"},{"name":"mixed neuroglial neoplasm","type":"exact"},{"name":"mixed neuroglial tumor","type":"exact"},{"name":"mixed neuroglial tumour","type":"exact"}],"termid":"MONDO:0003268","xrefs":{"Monarch":{"xref_id":"0003268"}}}


id: PBO:0065642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 20C, pseudogene","termid":"PBO:0065642"}


id: PBO:0066880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 180","termid":"PBO:0066880"}


id: PBO:0059903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 26","termid":"PBO:0059903"}


id: MONDO:0007191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, relapsing, multisystemic vasculitis characterized by mucocutaneous lesions, as well as articular, vascular, ocular and central nervous system manifestations.","definition_xrefs":["Orphanet:117"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete predominantly large-vessel vasculitis (obsolete MONDO:0015488)","termid":"MONDO:0015488"},{"relation_name":"excluded_subClassOf","term_name":"obsolete inflammatory and autoimmune disease with epilepsy (obsolete MONDO:0015657)","termid":"MONDO:0015657"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic diseases with anterior uveitis (obsolete MONDO:0017259)","termid":"MONDO:0017259"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic diseases with posterior uveitis (obsolete MONDO:0017260)","termid":"MONDO:0017260"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic diseases with panuveitis (obsolete MONDO:0017261)","termid":"MONDO:0017261"},{"relation_name":"excluded_subClassOf","term_name":"obsolete autoinflammatory syndrome with skin involvement (obsolete MONDO:0017370)","termid":"MONDO:0017370"},{"relation_name":"excluded_subClassOf","term_name":"obsolete unclassified autoinflammatory syndrome (obsolete MONDO:0017957)","termid":"MONDO:0017957"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Behcet disease","secondary_identifiers":["UMLS:C0004943","SCTID:310701003","OMIM:109650","MEDGEN:2568","GARD:848","ICD9:136.1","NANDO:1200284","NCIT:C34416","MedDRA:10004213","icd11.foundation:1668927157","EFO:0003780","MESH:D001528","NANDO:2200422","DOID:13241"],"synonyms":[{"name":"Adamantiades-Behcet disease","type":"exact"},{"name":"BD","type":"related"},{"name":"Bechet syndrome","type":"exact"},{"name":"Behcet disease","type":"exact"},{"name":"Behcet syndrome","type":"exact"},{"name":"Behcet's disease","type":"related"},{"name":"Behcet's syndrome","type":"exact"},{"name":"Behet's syndrome","type":"exact"},{"name":"Behçet disease","type":"exact"},{"name":"Behçet syndrome","type":"exact"},{"name":"Behçet's disease","type":"related"},{"name":"Behçet's syndrome","type":"exact"},{"name":"Behçet-Adamantiades syndrome","type":"exact"},{"name":"Behçet’s disease","type":"related"},{"name":"Morbus Behçet's syndrome","type":"exact"},{"name":"silk road disease","type":"exact"},{"name":"triple symptom complex","type":"exact"}],"termid":"MONDO:0007191","xrefs":{"Monarch":{"xref_id":"0007191"}}}


