# terms

id: MONDO:1011738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal metatarsal fistula, non-human animal","secondary_identifiers":["OMIA:000389"],"termid":"MONDO:1011738","xrefs":{"Monarch":{"xref_id":"1011738"}}}


id: MONDO:0800125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A necrotizing vasculitis characterized by widespread small-vessel giant cell angitis and extravascular granulomas.","definition_xrefs":["PMID:637044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necrotizing vasculitis","termid":"MONDO:0800113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disseminated visceral giant cell angiitis","synonyms":[{"name":"disseminated visceral giant cell arteristic","type":"exact"},{"name":"disseminated visceral giant cell arteritis","type":"exact"}],"termid":"MONDO:0800125","xrefs":{"Monarch":{"xref_id":"0800125"}}}


id: PBO:0084602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YLR391W was originally annotated as an independent ORF, but was completely contained in larger ORF YLR391W-A in the same frame, and was merged into it on 7-30-1997","termid":"PBO:0084602"}


id: MONDO:0012209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Branchiogenic deafness syndrome is a multiple congenital anomalies syndrome, described in one family to date, characterized by branchial cysts or fistulae; ear malformations; congenital hearing loss (conductive, sensorineural, and mixed); internal auditory canal hypoplasia; strabismus; trismus; abnormal fifth fingers; vitiliginous lesions, short stature; and mild learning disability. Renal and uretral abnormalities are absent.","definition_xrefs":["Orphanet:50815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branchiogenic deafness syndrome","secondary_identifiers":["UMLS:C1836673","GARD:16648","MEDGEN:322970","SCTID:717944002","MESH:C563780","OMIM:609166"],"synonyms":[{"name":"BRANCHIOGENIC-deafness syndrome","type":"related"},{"name":"MC)garbanC)-Loiselet syndrome","type":"exact"},{"name":"Mégarbané-Loiselet syndrome","type":"exact"}],"termid":"MONDO:0012209","xrefs":{"Monarch":{"xref_id":"0012209"}}}


id: PBO:0066155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB binding protein 7, chromatin remodeling factor","termid":"PBO:0066155"}


id: MONDO:0006155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the colon. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C5497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal neuroendocrine tumor G1","termid":"MONDO:0006162"},{"relation_name":"is_a","term_name":"neuroendocrine tumor of the colon, well differentiated, low or intermediate grade tumor","termid":"MONDO:0015067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colon neuroendocrine tumor G1","secondary_identifiers":["UMLS:C1333084","MEDGEN:234158","EFO:1000188"],"synonyms":[{"name":"carcinoid tumor of colon","type":"exact"},{"name":"carcinoid tumor of the colon","type":"exact"},{"name":"carcinoid tumour of colon","type":"exact"},{"name":"carcinoid tumour of the colon","type":"exact"},{"name":"colon NET G1","type":"exact"},{"name":"colon carcinoid tumor","type":"exact"},{"name":"colon carcinoid tumor (disease)","type":"exact"},{"name":"colon carcinoid tumour","type":"exact"},{"name":"colon carcinoid tumour (disease)","type":"exact"},{"name":"colon neuroendocrine neoplasm G1","type":"exact"},{"name":"colon neuroendocrine tumor G1","type":"exact"},{"name":"colon neuroendocrine tumor, well differentiated, low grade","type":"exact"},{"name":"colonic carcinoid tumor","type":"exact"},{"name":"colonic carcinoid tumour","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of colon","type":"exact"}],"termid":"MONDO:0006155","xrefs":{"Monarch":{"xref_id":"0006155"}}}


id: PBO:0000446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD protein-2 Cph2","termid":"PBO:0000446"}


id: PBO:0049585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 3","termid":"PBO:0049585"}


id: MONDO:0021294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the cardia of stomach.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cardia carcinoma","termid":"MONDO:0003834"},{"relation_name":"is_a","term_name":"stomach carcinoma in situ","termid":"MONDO:0004716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma in situ of gastric cardia","secondary_identifiers":["NCIT:C4428","UMLS:C0345795","SCTID:92560002","MEDGEN:91052"],"synonyms":[{"name":"carcinoma in situ of cardia of stomach","type":"exact"},{"name":"carcinoma in situ of the cardia of the stomach","type":"exact"},{"name":"carcinoma in situ of the gastric cardia","type":"exact"},{"name":"cardia of stomach carcinoma in situ","type":"exact"},{"name":"cardia of stomach in situ carcinoma","type":"exact"},{"name":"gastric cardia carcinoma in situ","type":"exact"},{"name":"gastric cardia carcinoma in situ aJCC v6 and v7","type":"exact"},{"name":"stage 0 cardia of stomach carcinoma","type":"exact"},{"name":"stage 0 gastric cardia carcinoma","type":"exact"}],"termid":"MONDO:0021294","xrefs":{"Monarch":{"xref_id":"0021294"}}}


id: PBO:0035769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_magnesium_level","termid":"PBO:0035769"}


id: FYPO:0003031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation takes place in cells that are not subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000301"],"is_obsolete":false,"name":"mating without nitrogen starvation","synonyms":[{"name":"conjugation without nitrogen starvation","type":"exact"},{"name":"mating in the absence of nitrogen starvation","type":"exact"},{"name":"mating without nitrogen depletion","type":"exact"},{"name":"mating without nitrogen deprivation","type":"exact"}],"termid":"FYPO:0003031"}


id: MONDO:0010116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thoracomelic dysplasia","secondary_identifiers":["MEDGEN:336441","icd11.foundation:1284518024","MESH:C564773","Orphanet:1803","UMLS:C1848863","OMIM:273740","GARD:10612"],"synonyms":[{"name":"'thoraco-limb' dysplasia","type":"related"},{"name":"Rivera-Perez-Salas syndrome","type":"exact"},{"name":"thoraco-limb dysplasia","type":"related"},{"name":"thoracolimb dysplasia, Rivera type","type":"exact"},{"name":"thoracomelic dysplasia","type":"exact"}],"termid":"MONDO:0010116","xrefs":{"Monarch":{"xref_id":"0010116"}}}


id: PBO:0060078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 25","termid":"PBO:0060078"}


id: PBO:0029968
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_gamma_radiation","termid":"PBO:0029968"}


id: GO:0090059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the protoxylem over time, from its formation to the mature structure. The protoxylem comprises the first formed elements of the primary xylem.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem development","termid":"GO:0010089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protoxylem development","termid":"GO:0090059"}


id: GO:0021782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a glial cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell development","termid":"GO:0021782"}


id: GO:0099563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modifies the structure/morphology of a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modification of synaptic structure","synonyms":[{"name":"synapse remodelling","type":"exact"}],"termid":"GO:0099563"}


id: PBO:0059618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 30","termid":"PBO:0059618"}


id: PR:O42665
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27D7.11c gene.","definition_xrefs":["UniProtKB:O42665","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized but2-like protein C27D7.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.11c","synonyms":[{"name":"Spom972h-SPAC27D7.11c","type":"exact"}],"termid":"PR:O42665"}


id: PBO:0089676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator family transmembrane transporter Mug111","termid":"PBO:0089676"}


id: PBO:0091115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aspartase, involved in protein processing","termid":"PBO:0091115"}


id: GO:0061223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesenchymal cell differentiation involved in kidney development","termid":"GO:0072161"},{"relation_name":"part_of","term_name":"mesonephric mesenchyme development","termid":"GO:0061219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchymal cell differentiation","termid":"GO:0061223"}


id: PBO:0048393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 2 like 1","termid":"PBO:0048393"}


id: PBO:0072376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 2","termid":"PBO:0072376"}


id: MONDO:0008601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride storage disease","termid":"MONDO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0002525"],"is_obsolete":false,"name":"triglyceride storage disease, type 1","secondary_identifiers":["MEDGEN:349897","MESH:C566031","UMLS:C1860821","OMIM:190420"],"synonyms":[{"name":"triglyceride storage disease, type I","type":"related"}],"termid":"MONDO:0008601","xrefs":{"Monarch":{"xref_id":"0008601"}}}


id: MONDO:0015425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lethal recessive chondrodysplasia is an extremely rare lethal form of chondrodysplasia characterized by severe micromelic dwarfism, short and incurved limbs with normal hands and feet, facial dysmorphism (disproportionately large skull, frontal prominence, slightly flattened nasal bridge and short neck), muscular hypotonia, hyperlaxity of the extremities, and a narrow thorax. Most patients die of respiratory distress during the first hours or weeks of life. There have been no further descriptions in the literature since 1988.","definition_xrefs":["Orphanet:1423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"chondrodysplasia","termid":"MONDO:0022723"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal recessive chondrodysplasia","secondary_identifiers":["UMLS:C4304745","GARD:3399","MEDGEN:930414","icd11.foundation:550352998","SCTID:719404009"],"synonyms":[{"name":"Maroteaux-Stanescu-Cousin syndrome","type":"exact"},{"name":"chondrodysplasia lethal recessive","type":"exact"}],"termid":"MONDO:0015425","xrefs":{"Monarch":{"xref_id":"0015425"}}}


id: GO:1904745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an Atg1/UKL1 kinase complex.","definition_xrefs":["GO_REF:0000079","GOC:dph","PMID:25139988","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"Atg1/ULK1 kinase complex assembly","synonyms":[{"name":"ATG1 kinase complex assembly","type":"exact"},{"name":"ATG1 kinase complex formation","type":"exact"},{"name":"ATG1-ATG13 complex assembly","type":"exact"},{"name":"ATG1-ATG13 complex formation","type":"exact"},{"name":"ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"Atg1p signalling complex assembly","type":"exact"},{"name":"Atg1p signalling complex formation","type":"exact"},{"name":"ULK1 signaling complex assembly","type":"exact"},{"name":"ULK1 signaling complex formation","type":"exact"},{"name":"ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"ULK1-ATG13-RB1CC1 complex formation","type":"exact"}],"termid":"GO:1904745"}


id: PBO:0075650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain containing 7","termid":"PBO:0075650"}


id: MONDO:0013468
data:
  {"annotated_genes":["SJAG_02163"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87108],"is_not":false,"summary":null,"term":"MONDO:0013468"}]},"cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the DHDDS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"DHDDS-related syndrome","termid":"MONDO:1010097"},{"relation_name":"is_a","term_name":"DHDDS-CDG","termid":"MONDO:1040054"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02163":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0024322","MONDO:0002320","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 59","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3151227","GARD:15724","DOID:0110352","OMIM:613861","MEDGEN:462577","ICD10CM:H35.5"],"synonyms":[{"name":"DHDDS retinitis pigmentosa","type":"exact"},{"name":"RP59","type":"exact"},{"name":"congenital disorder of glycosylation, type 1bb","type":"exact"},{"name":"congenital disorder of glycosylation, type Ibb","type":"related"},{"name":"retinitis pigmentosa 59","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in DHDDS","type":"exact"},{"name":"retinitis pigmentosa type 59","type":"exact"}],"termid":"MONDO:0013468","terms_by_termid":{"MONDO:0013468":null},"xrefs":{"Monarch":{"xref_id":"0013468"}}}


id: SO:0000739
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a plastid such as a chloroplast. The nucleomorph is the nuclei of the plastic.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleomorphic_sequence","synonyms":[{"name":"nucleomorphic sequence","type":"exact"}],"termid":"SO:0000739"}


id: MOD:01819
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-succinyl-L-lysine.","definition_xrefs":["PubMed:21151122","RESID:AA0545","PubMed:16582421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinylated residue","termid":"MOD:01029"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-succinyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-[(3-carboxypropanoyl)amino]hexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(3-carboxypropanoyl)azanyl]hexanoic acid","type":"exact"},{"name":"4-[[(5S)-5-amino-6-hydroxy-6-oxohexyl]amino]-4-oxobutanoate","type":"exact"},{"name":"MOD_RES N6-succinyllysine","type":"exact"},{"name":"N(epsilon)-(succinyl)lysine","type":"exact"},{"name":"N6-succinyl-L-lysine","type":"exact"},{"name":"succinyllysine","type":"exact"}],"termid":"MOD:01819"}


id: GO:0017149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein biosynthetic process inhibitor activity (obsolete GO:0017149)","synonyms":[{"name":"protein anabolism inhibitor activity","type":"exact"},{"name":"protein biosynthetic process inhibitor activity","type":"exact"},{"name":"protein formation inhibitor activity","type":"exact"},{"name":"protein synthesis inhibitor activity","type":"exact"}],"termid":"GO:0017149"}


id: PBO:0034386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_dendrite_location","termid":"PBO:0034386"}


id: GO:0071427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains messenger RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071427)","synonyms":[{"name":"mRNA-containing RNP export from nucleus","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071427"}


id: GO:0051070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactomannan, a polysaccharide composed of D-galactosyl and D-mannosyl. The mannosyl units form the backbone structure (a linear main chain) with the D-galactosyl as single side units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"galactomannan metabolic process","termid":"GO:0051069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"galactomannan biosynthetic process","synonyms":[{"name":"galactomannan anabolism","type":"exact"},{"name":"galactomannan biosynthesis","type":"exact"},{"name":"galactomannan formation","type":"exact"},{"name":"galactomannan synthesis","type":"exact"}],"termid":"GO:0051070"}


id: GO:0021611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the facial nerve. This process pertains to the initial formation of a structure from unspecified parts. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial ophthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dgh","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"facial nerve morphogenesis","termid":"GO:0021610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial nerve formation","synonyms":[{"name":"CN VII biosynthesis","type":"related"},{"name":"CN VII formation","type":"related"}],"termid":"GO:0021611"}


id: PR:O94379
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl32 gene.","definition_xrefs":["UniProtKB:O94379","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L32, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.13c","synonyms":[{"name":"Spom972h-mrpl32","type":"exact"}],"termid":"PR:O94379"}


id: GO:0031901
data:
  {"annotated_genes":["SJAG_01112","SJAG_01379","SJAG_00314"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80711,96228,100033],"is_not":false,"summary":null,"term":"GO:0031901"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an early endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"early endosome","termid":"GO:0005769"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00314":null,"SJAG_01112":null,"SJAG_01379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575","GO:0005768"],"is_obsolete":false,"name":"early endosome membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031901","terms_by_termid":{"GO:0031901":null}}


id: PBO:0083376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps 3' end of verified ORF SCW10/YMR305C","termid":"PBO:0083376"}


id: MONDO:0012736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any long QT syndrome in which the cause of the disease is a mutation in the CAV3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 9","secondary_identifiers":["MESH:C567515","UMLS:C2678485","DOID:0110650","OMIM:611818","GARD:10435","MEDGEN:395635"],"synonyms":[{"name":"CAV3 long QT syndrome","type":"exact"},{"name":"LQT9","type":"exact"},{"name":"long QT syndrome 2/9, digenic","type":"related"},{"name":"long QT syndrome 9","type":"exact"},{"name":"long QT syndrome 9, acquired, susceptibility to","type":"related"},{"name":"long QT syndrome caused by mutation in CAV3","type":"exact"},{"name":"long QT syndrome type 9","type":"exact"}],"termid":"MONDO:0012736","xrefs":{"Monarch":{"xref_id":"0012736"}}}


id: PBO:0034354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_tandem_paralogy_relationship_with","termid":"PBO:0034354"}


id: PBO:0030287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_sulfide_level","termid":"PBO:0030287"}


id: PBO:0091072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex E3 subunit Hrd1","termid":"PBO:0091072"}


id: PBO:0079781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A2, pseudogene","termid":"PBO:0079781"}


id: PBO:0043376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 6","termid":"PBO:0043376"}


id: PBO:0085737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in transcription-coupled nucleotide excision repair; repairs UV-induced DNA lesions; recruitment to DNA lesions is dependent on an elongating RNA polymerase II; homolog of human CSB protein","termid":"PBO:0085737"}


id: PBO:0047019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A22","termid":"PBO:0047019"}


id: PBO:0076447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 3","termid":"PBO:0076447"}


id: GO:1900480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of diacylglycerol biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"regulates","term_name":"diacylglycerol biosynthetic process","termid":"GO:0006651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of diacylglycerol biosynthetic process","synonyms":[{"name":"regulation of diacylglycerol anabolism","type":"exact"},{"name":"regulation of diacylglycerol biosynthesis","type":"exact"},{"name":"regulation of diacylglycerol formation","type":"exact"},{"name":"regulation of diacylglycerol synthesis","type":"exact"}],"termid":"GO:1900480"}


id: GO:0004655
data:
  {"annotated_genes":["SJAG_01372"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71981],"is_not":false,"summary":null,"term":"GO:0004655"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 5-aminolevulinate = 2 H2O + H+ + porphobilinogen.","definition_xrefs":["RHEA:24064","EC:4.2.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"porphobilinogen synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PORPHOBILSYNTH-RXN","Reactome:R-HSA-189439","KEGG_REACTION:R00036"],"synonyms":[{"name":"5-aminolevulinate hydro-lyase (adding 5-aminolevulinate and cyclizing)","type":"related"},{"name":"5-aminolevulinate hydro-lyase (adding 5-aminolevulinate and cyclizing; porphobilinogen-forming)","type":"related"},{"name":"5-levulinic acid dehydratase activity","type":"related"},{"name":"aminolevulinate dehydratase activity","type":"exact"},{"name":"aminolevulinic dehydratase activity","type":"related"},{"name":"delta-aminolevulinate dehydratase activity","type":"related"},{"name":"delta-aminolevulinic acid dehydrase activity","type":"related"},{"name":"delta-aminolevulinic acid dehydratase activity","type":"exact"},{"name":"delta-aminolevulinic dehydratase activity","type":"related"}],"termid":"GO:0004655","terms_by_termid":{"GO:0004655":null}}


id: MONDO:0800179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection of the joint that is a complication occurring in 1% to 2% of primary arthroplasties.","definition_xrefs":["PMID:33380199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial arthritis","termid":"MONDO:0004471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periprosthetic joint infection","termid":"MONDO:0800179","xrefs":{"Monarch":{"xref_id":"0800179"}}}


id: MONDO:0017561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital knee dislocation","termid":"MONDO:0017470"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital genu flexum","secondary_identifiers":["icd11.foundation:830907514","GARD:21226","Orphanet:295232","UMLS:C5681090","MEDGEN:1842651"],"termid":"MONDO:0017561","xrefs":{"Monarch":{"xref_id":"0017561"}}}


id: GO:0015653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycine betaine(out) + H+(out) = glycine betaine(in) + H+(in).","definition_xrefs":["TC:2.A.15.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine transmembrane transporter activity","termid":"GO:0015199"},{"relation_name":"is_a","term_name":"quaternary ammonium group:proton symporter activity","termid":"GO:0015652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glycine betaine:proton symporter activity","synonyms":[{"name":"glycine betaine:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015653"}


id: SO:0000775
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An adaptive island is a genomic island that provides an adaptive advantage to the host.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptive_island","synonyms":[{"name":"adaptive island","type":"exact"}],"termid":"SO:0000775"}


id: MONDO:0008350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonic stenosis and deafness","secondary_identifiers":["MEDGEN:357273","OMIM:178651","UMLS:C1867406"],"synonyms":[{"name":"pulmonic stenosis and deafness","type":"exact"}],"termid":"MONDO:0008350","xrefs":{"Monarch":{"xref_id":"0008350"}}}


id: MONDO:0015864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor characterized by the presence of at least two different germ cell components. The different germ cell components include choriocarcinoma, embryonal carcinoma, yolk sac tumor, teratoma, and seminoma. It occurs in the ovary, testis, and extragonadal sites including central nervous system and mediastinum.","definition_xrefs":["NCIT:C4290"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"extragonadal non-dysgerminomatous germ cell tumor","termid":"MONDO:0020539"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mixed germ cell tumor","secondary_identifiers":["UMLS:C0334524","NANDO:2200071","GARD:20202","MEDGEN:87257","ICDO:9085/3","DOID:3306","Orphanet:180234"],"synonyms":[{"name":"combined germ cell neoplasm","type":"exact"},{"name":"combined germ cell tumor","type":"exact"},{"name":"combined germ cell tumour","type":"exact"},{"name":"mixed germ cell cancer","type":"exact"},{"name":"mixed germ cell neoplasm","type":"exact"},{"name":"mixed germ cell tumor","type":"exact"}],"termid":"MONDO:0015864","xrefs":{"Monarch":{"xref_id":"0015864"}}}


id: PBO:0117393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reactive intermediate imine deaminase A","termid":"PBO:0117393"}


id: GO:0007235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of Ypd1 protein (obsolete GO:0007235)","synonyms":[{"name":"activation of Ypd1 protein","type":"exact"}],"termid":"GO:0007235"}


id: GO:0102262
data:
  {"annotated_genes":["SJAG_00174"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109941],"is_not":false,"summary":null,"term":"GO:0102262"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil16 in tRNA + NAD(P) = H+ + a uracil16 in tRNA + NAD(P)H.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0140098","GO:0140101","GO:0003824"],"is_obsolete":false,"name":"tRNA-dihydrouridine16 synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12454"],"termid":"GO:0102262","terms_by_termid":{"GO:0102262":null}}


id: SO:0002379
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for methylation_guide_snoRNA. A snoRNA that specifies the site of 2'-O-ribose methylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C_D_box_snoRNA_gene","termid":"SO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylation_guide_snoRNA_gene","synonyms":[{"name":"methylation guide snoRNA gene","type":"exact"}],"termid":"SO:0002379"}


id: PATO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue the bearer's disposition to having an affinity for water; it is readily absorbing or dissolving in water.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrophilicity","termid":"PATO:0001886"}


id: GO:0032301
data:
  {"annotated_genes":["SJAG_02226","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70138,73016],"is_not":false,"summary":null,"term":"GO:0032301"}]},"cv_name":"cellular_component","definition":"A heterodimer involved in the recognition and repair of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MSH2 and MSH6.","definition_xrefs":["PMID:11005803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02226":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MutSalpha complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"MMR complex","type":"broad"},{"name":"MSH2/MSH6 complex","type":"exact"}],"termid":"GO:0032301","terms_by_termid":{"GO:0032301":null}}


id: MONDO:0008538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A large vessel vasculitis predominantly involving the arteries originating from the aortic arch and especially the extracranial branches of the carotid arteries.","definition_xrefs":["Orphanet:397"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"granulomatous angiitis","termid":"MONDO:0002341"},{"relation_name":"is_a","term_name":"central nervous system vasculitis","termid":"MONDO:0003346"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temporal arteritis","secondary_identifiers":["MEDGEN:365495","NANDO:1200259","MedDRA:10018250","NCIT:C35065","NORD:805","ICD9:446.5","icd11.foundation:1929970386","UMLS:C1956391","NANDO:1200260","EFO:1001209","SCTID:400130008","GARD:9615","OMIM:187360","MedDRA:10043207","NANDO:1200258","DOID:13375"],"synonyms":[{"name":"GCA","type":"related"},{"name":"Giant Cell Arteritis","type":"exact"},{"name":"Horton disease","type":"exact"},{"name":"Horton's arteritis","type":"related"},{"name":"Horton's disease","type":"exact"},{"name":"Horton's giant cell arteritis","type":"related"},{"name":"Horton's temporal arteritis","type":"related"},{"name":"Horton’s disease","type":"related"},{"name":"Horton’s syndrome","type":"related"},{"name":"arteritis cranialis","type":"related"},{"name":"arteritis temporalis","type":"related"},{"name":"cranial arteritis","type":"related"},{"name":"giant cell arteritis","type":"exact"},{"name":"inflammation of temporal artery","type":"exact"},{"name":"polymyalgia rheumatica","type":"related"},{"name":"temporal arteritis","type":"exact"},{"name":"temporal artery inflammation","type":"exact"}],"termid":"MONDO:0008538","xrefs":{"Monarch":{"xref_id":"0008538"}}}


id: GO:0042610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CD8, a receptor found on the surface of thymocytes and cytotoxic and suppressor T-lymphocytes.","definition_xrefs":["GOC:jl","MSH:D016827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"CD8 receptor binding","termid":"GO:0042610"}


id: PR:O14028
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial N(5)-glutamine methyltransferase mtq1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.05c","synonyms":[{"name":"Spom972h-SPAC29B12.05c","type":"exact"}],"termid":"PR:O14028"}


id: GO:0006038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cell wall chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in the walls of cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall chitin biosynthetic process (obsolete GO:0006038)","synonyms":[{"name":"cell wall chitin anabolism","type":"exact"},{"name":"cell wall chitin biosynthesis","type":"exact"},{"name":"cell wall chitin formation","type":"exact"},{"name":"cell wall chitin synthesis","type":"exact"}],"termid":"GO:0006038"}


id: PR:G2TRN0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4H3.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRN0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4H3.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.16","synonyms":[{"name":"Spom972h-SPAC4H3.16","type":"exact"}],"termid":"PR:G2TRN0"}


id: PBO:0043577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 1 chain","termid":"PBO:0043577"}


id: MONDO:0009017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneal degeneration, band-shaped spheroid","secondary_identifiers":["MEDGEN:347489","OMIM:217520","UMLS:C1857571"],"synonyms":[{"name":"corneal degeneration, band-shaped spheroid","type":"exact"}],"termid":"MONDO:0009017","xrefs":{"Monarch":{"xref_id":"0009017"}}}


id: GO:0010633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epithelial cell migration.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell migration","termid":"GO:0010632"},{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial cell migration","termid":"GO:0010633"}


id: MONDO:0006656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the aorta. Causes include trauma, infectious disorders, and connective tissue disorders.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortitis","secondary_identifiers":["MEDGEN:8154","NANDO:1200251","MedDRA:10002921","SCTID:70933002","DOID:519","EFO:1000816","MESH:D001025","NANDO:2200423","NCIT:C97085","UMLS:C0003509"],"synonyms":[{"name":"aorta inflammation","type":"exact"},{"name":"inflammation of aorta","type":"exact"}],"termid":"MONDO:0006656","xrefs":{"Monarch":{"xref_id":"0006656"}}}


id: GO:1903161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any pantothenate transmembrane transporter activity that is involved in pantothenate import into cell.","definition_xrefs":["ISBN:0-8249-3695-6","GO_REF:0000061","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete pantothenate transmembrane transporter activity involved in pantothenate import into cell (obsolete GO:1903161)","synonyms":[{"name":"pantothenate transmembrane transporter activity involved in pantothenate import into cell","type":"exact"},{"name":"vitamin B5 transmembrane transporter activity involved in pantothenate import into cell","type":"exact"}],"termid":"GO:1903161"}


id: GO:0008441
data:
  {"annotated_genes":["SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79322],"is_not":false,"summary":null,"term":"GO:0008441"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine 3',5'-bisphosphate + H2O = adenosine 5'-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidase activity","termid":"GO:0008252"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"3'(2'),5'-bisphosphate nucleotidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:10040","MetaCyc:325-BISPHOSPHATE-NUCLEOTIDASE-RXN","Reactome:R-HSA-176606","Reactome:R-HSA-8953499"],"synonyms":[{"name":"3'(2'),5' bisphosphate nucleotidase activity","type":"exact"},{"name":"3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase activity","type":"related"},{"name":"3'-phosphoadenylylsulfate 3'-phosphatase activity","type":"related"},{"name":"DPNPase activity","type":"related"},{"name":"adenosine-3'(2'),5'-bisphosphate 3'(2')-phosphohydrolase activity","type":"related"},{"name":"phosphoadenylate 3'-nucleotidase activity","type":"related"}],"termid":"GO:0008441","terms_by_termid":{"GO:0008441":null}}


id: PBO:0027301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_increase_in_RNA_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027301"}


id: MONDO:0859319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal recessive 8","secondary_identifiers":["MEDGEN:1824030","OMIM:620133","UMLS:C5774257"],"termid":"MONDO:0859319","xrefs":{"Monarch":{"xref_id":"0859319"}}}


id: FYPO:0006155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more mating mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Mating genes are normally transcribed during conjugation with cellular fusion (i.e. mating).","definition_xrefs":["PMID:19056896","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased level of mating gene mRNA during vegetative growth","synonyms":[{"name":"increased level of conjugation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of mating gene RNA during vegetative growth","type":"exact"},{"name":"increased level of mating gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of mating gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of mating with cellular fusion gene mRNA during vegetative growth","type":"exact"},{"name":"increased mating gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0006155"}


id: SO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA region enriched in DNA loop anchors and across which DNA loops occur less often than expected by chance.","definition_xrefs":["GREEKC:cl","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"},{"relation_name":"part_of","term_name":"topologically_associated_domain","termid":"SO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topologically_associated_domain_boundary","synonyms":[{"name":"TAD boundary","type":"exact"},{"name":"TAD_boundary","type":"exact"},{"name":"topologically associated domain boundary","type":"exact"}],"termid":"SO:0002305"}


id: PBO:0041054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7 pseudogene 5","termid":"PBO:0041054"}


id: PBO:0035701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_during_vegetative_growth","termid":"PBO:0035701"}


id: PBO:0080490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VWA8 antisense RNA 1 (head to head)","termid":"PBO:0080490"}


id: PR:O74956
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrps8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein subunit S8, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.10c","synonyms":[{"name":"Spom972h-mrps8","type":"exact"}],"termid":"PR:O74956"}


id: SO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the micronuclei of a cell.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micronuclear_sequence","synonyms":[{"name":"micronuclear sequence","type":"exact"}],"termid":"SO:0000084"}


id: PBO:0043072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 1 subunit","termid":"PBO:0043072"}


id: GO:0070772
data:
  {"annotated_genes":["SJAG_02665","SJAG_02289","SJAG_01236","SJAG_00638"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80608,88071,110295,113863],"is_not":false,"summary":null,"term":"GO:0070772"}]},"cv_name":"cellular_component","definition":"A phosphatidylinositol kinase complex that contains a phosphatidylinositol-3-phosphate 5-kinase subunit (Fab1p in yeast; PIKFYVE in mammals), a kinase activator, and a phosphatase, and may also contain additional proteins; it is involved in regulating the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate. In mammals the complex is composed of PIKFYVE, FIG4 and VAC14. In yeast it is composed of Atg18p, Fig4p, Fab1p, Vac14p and Vac7p.","definition_xrefs":["PMID:18950639","PMID:19158662","PMID:19037259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"vacuolar membrane","termid":"GO:0005774"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00638":null,"SJAG_01236":null,"SJAG_02289":null,"SJAG_02665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"PAS complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"autophagy-specific phosphatidylinositol 3-kinase complex","type":"related"}],"termid":"GO:0070772","terms_by_termid":{"GO:0070772":null}}


id: PBO:0048786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha 15","termid":"PBO:0048786"}


id: PBO:0086117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for degradation of unstable forms of cytochrome c; located in the mitochondria","termid":"PBO:0086117"}


id: GO:0046867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of carotenoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carotenoids are tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetraterpenoid transport","termid":"GO:0046866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"carotenoid transport","termid":"GO:0046867"}


id: PBO:0054935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2349","termid":"PBO:0054935"}


id: PBO:0074655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 44","termid":"PBO:0074655"}


id: PBO:0063712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5 pseudogene 1","termid":"PBO:0063712"}


id: GO:0061151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to its receptor on the surface of a target cell, which contributes to the segmentation of the renal system.","definition_xrefs":["GOC:yaf","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in renal system segmentation (obsolete GO:0061151)","synonyms":[{"name":"BMP signalling pathway involved in renal system segmentation","type":"exact"}],"termid":"GO:0061151"}


id: PBO:0038710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 4","termid":"PBO:0038710"}


id: MONDO:0019436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Childhood arthritis typically associated with psoriasis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile idiopathic arthritis","termid":"MONDO:0011429"},{"relation_name":"is_a","term_name":"psoriatic arthritis","termid":"MONDO:0011849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"psoriasis-related juvenile idiopathic arthritis","secondary_identifiers":["EFO:0009733","SCTID:239802003","Orphanet:85436","UMLS:C3714758","MEDGEN:811463","NCIT:C114361","ICD10EXP:L40.5+","GARD:10970","icd11.foundation:1473955563","ICD10EXP:M09.0*"],"synonyms":[{"name":"JPsA","type":"exact"},{"name":"juvenile psoriatic arthritis","type":"exact"},{"name":"psoriasis-related JIA","type":"exact"}],"termid":"MONDO:0019436","xrefs":{"Monarch":{"xref_id":"0019436"}}}


id: MONDO:1012129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin A deficiency, non-human animal","termid":"MONDO:1011726"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin A deficiency, gray wolf","secondary_identifiers":["OMIA:000552-9612"],"termid":"MONDO:1012129","xrefs":{"Monarch":{"xref_id":"1012129"}}}


id: MONDO:1011918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism, non-human animal","secondary_identifiers":["OMIA:000393"],"termid":"MONDO:1011918","xrefs":{"Monarch":{"xref_id":"1011918"}}}


id: GO:0006781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions that utilize succinyl-CoA in the synthesis of protoporphyrin IX.","definition_xrefs":["GOC:isa_complete","ISBN:0879010479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinyl-CoA metabolic process","termid":"GO:0006104"},{"relation_name":"is_a","term_name":"porphyrin-containing compound biosynthetic process","termid":"GO:0006779"},{"relation_name":"part_of","term_name":"uroporphyrinogen III biosynthetic process","termid":"GO:0006780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0033013"},{"rel_name":"part_of","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0033013","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"succinyl-CoA pathway","synonyms":[{"name":"biosynthesis of protoporphyrin IX via succinyl CoA","type":"exact"},{"name":"biosynthesis of protoporphyrin IX via succinyl-CoA","type":"exact"},{"name":"biosynthetic process of protoporphyrin IX via succinyl CoA","type":"exact"},{"name":"biosynthetic process of protoporphyrin IX via succinyl-CoA","type":"exact"},{"name":"succinyl CoA pathway","type":"exact"}],"termid":"GO:0006781"}


id: GO:0008294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate, stimulated by calcium-bound calmodulin.","definition_xrefs":["GOC:mah","PMID:1739965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase activity","termid":"GO:0004016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003674","GO:0009975","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"calcium- and calmodulin-responsive adenylate cyclase activity","secondary_identifiers":["Reactome:R-HSA-111930","Reactome:R-HSA-442715"],"synonyms":[{"name":"calcium- and calmodulin-responsive adenylyl cyclase activity","type":"exact"},{"name":"calcium/calmodulin-responsive adenylate cyclase activity","type":"exact"}],"termid":"GO:0008294"}


id: GO:0007221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of transcription of specific genes as a result of Notch signaling, mediated by the Notch intracellular domain.","definition_xrefs":["PMID:12651094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"part_of","term_name":"Notch signaling pathway","termid":"GO:0007219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0010467","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"positive regulation of transcription of Notch receptor target","secondary_identifiers":["Reactome:R-HSA-9013508"],"synonyms":[{"name":"N receptor target transcription factor activation","type":"related"},{"name":"Notch receptor target transcription factor activation","type":"related"}],"termid":"GO:0007221"}


id: GO:1901512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (-)-microperfuranone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"(-)-microperfuranone metabolic process","termid":"GO:1901510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(-)-microperfuranone biosynthetic process","synonyms":[{"name":"(-)-microperfuranone anabolism","type":"exact"},{"name":"(-)-microperfuranone biosynthesis","type":"exact"},{"name":"(-)-microperfuranone formation","type":"exact"},{"name":"(-)-microperfuranone synthesis","type":"exact"}],"termid":"GO:1901512"}


id: GO:0080088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of spermidine hydroxycinnamate conjugates.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine hydroxycinnamate conjugate biosynthetic process","termid":"GO:0080088"}


id: PBO:0086029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; YGR079W is not an essential gene","termid":"PBO:0086029"}


id: PBO:0046153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 1","termid":"PBO:0046153"}


id: GO:0050883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Involuntary movement caused by the application of a stimulus to an organism and a subsequent movement. The signal processing of this movement takes place in the spinal cord.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal movement","termid":"GO:0050881"},{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"musculoskeletal movement, spinal reflex action","termid":"GO:0050883"}


id: GO:0005596
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XIV) chains; type XIV collagen triple helices may link sheet-forming or fibrillar collagens to other structures.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XIV trimer","termid":"GO:0005596"}


id: GO:0039670
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A turret-like appendage formed at the vertices of an icosahedral capsid.","definition_xrefs":["GOC:jh2","PMID:20592081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid, decoration","termid":"GO:0098021"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, turret","termid":"GO:0039670"}


id: PBO:0059098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 4","termid":"PBO:0059098"}


id: MONDO:0011563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary gingival fibromatosis","termid":"MONDO:0016070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis, gingival, 2","secondary_identifiers":["MEDGEN:344226","MESH:C565323","OMIM:605544","UMLS:C1854181","GARD:2474"],"synonyms":[{"name":"GGF2","type":"related"},{"name":"GINGF2","type":"exact"},{"name":"HGF2","type":"related"},{"name":"fibromatosis gingival, hereditary, 2","type":"related"},{"name":"fibromatosis, gingival, 2","type":"exact"},{"name":"fibromatosis, gingival, hereditary, 2","type":"related"},{"name":"gingival fibromatosis, 2","type":"related"},{"name":"hereditary gingival fibromatosis, 2","type":"related"}],"termid":"MONDO:0011563","xrefs":{"Monarch":{"xref_id":"0011563"}}}


id: PBO:0045801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin receptor type B","termid":"PBO:0045801"}


id: PBO:0110320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha 1,4-galactosyltransferase (P1PK blood group)","termid":"PBO:0110320"}


id: PBO:0047000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A3, pseudogene","termid":"PBO:0047000"}


id: GO:0042631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of water.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to water deprivation","termid":"GO:0009414"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"cellular response to water stimulus","termid":"GO:0071462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to water deprivation","synonyms":[{"name":"cellular response to drought","type":"exact"}],"termid":"GO:0042631"}


id: MONDO:0011863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer aggressiveness quantitative trait locus on chromosome 19","secondary_identifiers":["OMIM:607592","UMLS:C1843533","MEDGEN:334432"],"synonyms":[{"name":"HPCqtl19","type":"related"},{"name":"prostate cancer aggressiveness QTL","type":"exact"},{"name":"prostate cancer aggressiveness quantitative trait locus on chromosome 19","type":"exact"},{"name":"prostate cancer aggressiveness quantitative trait locus on chromosome type 19","type":"exact"}],"termid":"MONDO:0011863","xrefs":{"Monarch":{"xref_id":"0011863"}}}


id: PBO:0058600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6732","termid":"PBO:0058600"}


id: PR:O74397
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asparagine synthetase domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase domain-containing protein C4F6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.11c","secondary_identifiers":["UniProtKB:O74397"],"synonyms":[{"name":"Spom972h-ASNSD1","type":"exact"}],"termid":"PR:O74397"}


id: PBO:0075465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 17","termid":"PBO:0075465"}


id: PBO:0073507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 2A","termid":"PBO:0073507"}


id: PBO:0049057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 62","termid":"PBO:0049057"}


id: GO:0047794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arogenate + NAD+ = L-tyrosine + NADH + CO2.","definition_xrefs":["EC:1.3.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyclohexadienyl dehydrogenase activity","secondary_identifiers":["RHEA:12256","MetaCyc:CYCLOHEXADIENYL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"L-arogenate:NAD(+) oxidoreductase activity","type":"related"},{"name":"L-arogenate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"L-arogenate:NAD+ oxidoreductase activity","type":"related"},{"name":"arogenate dehydrogenase activity","type":"related"},{"name":"arogenic dehydrogenase activity","type":"related"},{"name":"pretyrosine dehydrogenase activity","type":"related"}],"termid":"GO:0047794"}


id: MONDO:0021061
data:
  {"annotated_genes":["SJAG_04213","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87662,87661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A hereditary neoplastic syndrome in which tumors grow in the nervous system. There are typically 3 main types recognized, but other forms with uncertain etiology exist.","definition_xrefs":["Wikipedia:Neurofibromatosis","NCIT:C6727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"neurofibromatosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:237.7","ICD9:237.72","DOID:8712","ICD9:237.70","MESH:D017253","NANDO:1200226","NANDO:1200227","UMLS:C0162678","EFO:0008514","SCTID:19133005","ICDO:9540/1","ICD9:237.71","MEDGEN:58149","NANDO:2201003","NANDO:1200225","GARD:10420"],"synonyms":[{"name":"Recklinghausen's neurofibromatosis","type":"exact"},{"name":"acoustic neurofibromatosis","type":"exact"},{"name":"central Neurofibromatosis","type":"exact"},{"name":"neurofibromatosis","type":"exact"},{"name":"neurofibromatosis syndrome","type":"exact"},{"name":"neurofibromatosis type 2","type":"narrow"},{"name":"neurofibromatosis type 4","type":"narrow"},{"name":"neurofibromatosis type IV","type":"narrow"},{"name":"peripheral Neurofibromatosis","type":"exact"},{"name":"type IV neurofibromatosis of riccardi","type":"exact"},{"name":"von Reklinghausen disease","type":"exact"}],"termid":"MONDO:0021061","terms_by_termid":{"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0021061"}}}


id: PBO:0017864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I transcription termination factor/ RNA polymerase II transcription factor Reb1","termid":"PBO:0017864"}


id: MONDO:1011064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal hypoplasia, unilateral that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal hypoplasia, unilateral, non-human animal","termid":"MONDO:1010265"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal hypoplasia, unilateral, pig","secondary_identifiers":["OMIA:000855-9823"],"termid":"MONDO:1011064","xrefs":{"Monarch":{"xref_id":"1011064"}}}


id: PBO:0058381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4753","termid":"PBO:0058381"}


id: GO:0009990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell recognition involving the deposition of specific pathways in the extracellular matrix that guide migrating cells.","definition_xrefs":["ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix recognition","termid":"GO:0009989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"contact guidance","termid":"GO:0009990"}


id: GO:1905635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a FACT complex.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","PMID:20889714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"FACT complex assembly","synonyms":[{"name":"FACT complex formation","type":"exact"},{"name":"Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"Facilitates chromatin transcription complex formation","type":"exact"}],"termid":"GO:1905635"}


id: GO:1990109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recognition and rejection of pollen of one species by cells in the stigma of another species.","definition_xrefs":["PMID:21205670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recognition of pollen","termid":"GO:0048544"},{"relation_name":"part_of","term_name":"pollen-pistil interaction","termid":"GO:0009875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rejection of pollen from other species","synonyms":[{"name":"unilateral interspecific incompatibility","type":"exact"}],"termid":"GO:1990109"}


id: GO:1901633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle membrane organization.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle membrane organization","termid":"GO:1901632"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle membrane organization","termid":"GO:0048499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle membrane organization","synonyms":[{"name":"down regulation of SLMV biogenesis","type":"narrow"},{"name":"down regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"down regulation of synaptic vesicle membrane organization","type":"exact"},{"name":"down regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"down-regulation of SLMV biogenesis","type":"narrow"},{"name":"down-regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"down-regulation of synaptic vesicle membrane organization","type":"exact"},{"name":"down-regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"downregulation of SLMV biogenesis","type":"narrow"},{"name":"downregulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"downregulation of synaptic vesicle membrane organization","type":"exact"},{"name":"downregulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"inhibition of SLMV biogenesis","type":"narrow"},{"name":"inhibition of synaptic vesicle membrane organisation","type":"narrow"},{"name":"inhibition of synaptic vesicle membrane organization","type":"narrow"},{"name":"inhibition of synaptic vesicle membrane organization and biogenesis","type":"narrow"},{"name":"negative regulation of SLMV biogenesis","type":"narrow"},{"name":"negative regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"negative regulation of synaptic vesicle membrane organization and biogenesis","type":"related"}],"termid":"GO:1901633"}


id: GO:0071577
data:
  {"annotated_genes":["SJAG_04185","SJAG_01990","SJAG_03528","SJAG_01078","SJAG_00328","SJAG_01803","SJAG_02968","SJAG_00222"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78665],"is_not":false,"summary":null,"term":"GO:0071577"},{"annotations":[114647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"},{"annotations":[113520,104490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"},{"annotations":[94113,94112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140209"},{"annotations":[75092,104627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"}]},"cv_name":"biological_process","definition":"A process in which a zinc II ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transport","termid":"GO:0006829"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00328":null,"SJAG_01078":null,"SJAG_01803":null,"SJAG_01990":null,"SJAG_02968":null,"SJAG_03528":null,"SJAG_04185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"zinc ion transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-435354"],"synonyms":[{"name":"zinc II ion transmembrane transport","type":"exact"},{"name":"zinc ion membrane transport","type":"exact"},{"name":"zinc transmembrane transport","type":"exact"}],"termid":"GO:0071577","terms_by_termid":{"GO:0071577":null,"GO:0071578":null,"GO:0140147":null,"GO:0140209":null,"GO:1904257":null}}


id: GO:0045050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of protein insertion into the endoplasmic reticulum (ER) membrane in which stop-transfer membrane-anchor sequences become an ER membrane spanning helix.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into ER membrane","termid":"GO:0045048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"protein insertion into ER membrane by stop-transfer membrane-anchor sequence","synonyms":[{"name":"protein insertion into ER membrane, stop-transfer membrane-anchor sequence mediated","type":"exact"},{"name":"protein insertion into endoplasmic reticulum membrane by stop-transfer membrane-anchor sequence","type":"exact"},{"name":"protein-ER insertion by stop-transfer membrane-anchor sequence","type":"exact"},{"name":"protein-endoplasmic reticulum insertion by stop-transfer membrane-anchor sequence","type":"exact"},{"name":"stop-transfer membrane-anchor sequence mediated protein insertion into ER membrane","type":"exact"}],"termid":"GO:0045050"}


id: MONDO:0021528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the breast parenchyma in males.","definition_xrefs":["NCIT:C4620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of male breast","secondary_identifiers":["MEDGEN:83867","UMLS:C0347482","SCTID:92206006"],"synonyms":[{"name":"benign Male breast neoplasm","type":"exact"},{"name":"benign Male breast tumor","type":"exact"},{"name":"benign Male breast tumour","type":"exact"},{"name":"benign neoplasm of the Male breast","type":"exact"},{"name":"benign tumor of Male breast","type":"exact"},{"name":"benign tumor of the Male breast","type":"exact"},{"name":"benign tumour of Male breast","type":"exact"},{"name":"benign tumour of the Male breast","type":"exact"},{"name":"male breast benign neoplasm","type":"exact"}],"termid":"MONDO:0021528","xrefs":{"Monarch":{"xref_id":"0021528"}}}


id: GO:0090499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-carboxyhexanoyl-[ACP] methyl ester + H2O = 6-carboxyhexanoyl-[ACP] + H+ + methanol.","definition_xrefs":["RHEA:42700","PMID:23045647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"pimelyl-[acyl-carrier protein] methyl ester esterase activity","secondary_identifiers":["EC:3.1.1.85","MetaCyc:RXN-11483"],"synonyms":[{"name":"pimelyl-[acyl-carrier protein] methyl ester hydrolase activity","type":"related"}],"termid":"GO:0090499"}


id: PBO:0061186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Ser (TGA) 1-1","termid":"PBO:0061186"}


id: GO:1904620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dimethyl sulfoxide stimulus.","definition_xrefs":["GOC:TermGenie","PMID:12873812","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to dimethyl sulfoxide","termid":"GO:1904619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dimethyl sulfoxide","synonyms":[{"name":"cellular response to DMSO","type":"exact"}],"termid":"GO:1904620"}


id: PBO:0046857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas associated factor 1","termid":"PBO:0046857"}


id: FYPO:0001510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is viable, cell shape is altered, and cell size remains normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001121"},{"relation_name":"is_a","term_name":"viable vegetative cell with normal cell size","termid":"FYPO:0002176"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"viable vegetative cell, abnormal cell shape, normal cell size","synonyms":[{"name":"viable lumpy cell","type":"related"},{"name":"viable vegetative cell with abnormal cell shape and normal cell size","type":"related"},{"name":"viable vegetative cell, abnormal cell shape, normal cell length","type":"narrow"},{"name":"viable vegetative cell, abnormal cell shape, normal cell size during mitotic cell cycle","type":"related"},{"name":"viable, abnormal cell shape, normal cell size during vegetative growth","type":"exact"}],"termid":"FYPO:0001510"}


id: GO:0045579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of B cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell differentiation","termid":"GO:0045577"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte differentiation","termid":"GO:0045621"},{"relation_name":"is_a","term_name":"positive regulation of B cell activation","termid":"GO:0050871"},{"relation_name":"positively_regulates","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell differentiation","synonyms":[{"name":"activation of B cell differentiation","type":"narrow"},{"name":"positive regulation of B cell development","type":"related"},{"name":"positive regulation of B lymphocyte differentiation","type":"exact"},{"name":"positive regulation of B-cell differentiation","type":"exact"},{"name":"positive regulation of B-lymphocyte differentiation","type":"exact"},{"name":"stimulation of B cell differentiation","type":"narrow"},{"name":"up regulation of B cell differentiation","type":"exact"},{"name":"up-regulation of B cell differentiation","type":"exact"},{"name":"upregulation of B cell differentiation","type":"exact"}],"termid":"GO:0045579"}


id: PBO:0064649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRF interacting protein alpha 1","termid":"PBO:0064649"}


id: GO:0039576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host JAK1 (Janus Kinase 1).","definition_xrefs":["PMID:16188985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of JAK1 activity","secondary_identifiers":["VZ:784","GO:0039515"],"synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of JAK1 activity","type":"narrow"},{"name":"inhibition of host JAK activity by virus","type":"narrow"},{"name":"negative regulation by virus of host JAK","type":"narrow"},{"name":"negative regulation by virus of tyrosine phosphorylation of host STAT protein","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of JAK1 activity","type":"narrow"},{"name":"suppression by virus of host JAK1 activity","type":"narrow"},{"name":"suppression by virus of tyrosine phosphorylation of host STAT protein","type":"narrow"},{"name":"viral inhibition of tyrosine phosphorylation of host STAT protein","type":"narrow"}],"termid":"GO:0039576"}


id: MONDO:0013859
data:
  {"annotated_genes":["SJAG_00404"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86664],"is_not":false,"summary":null,"term":"MONDO:0013859"}]},"cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the AGK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00404":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 38","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3553494","MEDGEN:766408","DOID:0110245","OMIM:614691"],"synonyms":[{"name":"AGK early-onset non-syndromic cataract","type":"exact"},{"name":"CATC5","type":"exact"},{"name":"CTRCT38","type":"exact"},{"name":"autosomal recessive congenital cataract 5","type":"exact"},{"name":"cataract 38","type":"exact"},{"name":"cataract 38, autosomal recessive","type":"exact"},{"name":"cataract type 38","type":"exact"},{"name":"cataract, autosomal recessive congenital 5","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in AGK","type":"exact"}],"termid":"MONDO:0013859","terms_by_termid":{"MONDO:0013859":null},"xrefs":{"Monarch":{"xref_id":"0013859"}}}


id: MONDO:0006260
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A type of renal carcinoma affecting mostly young African-Americans. It is located in the medulla of the kidney, and follows an aggressive clinical course. Most reported cases have shown metastatic disease at the time of diagnosis.","definition_xrefs":["NCIT:C7572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"kidney medullary carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10064886","DOID:0070475","GARD:13175","MEDGEN:888108","EFO:1000314","NORD:1999","Orphanet:319319","ONCOTREE:MRC","UMLS:C4049328","MONDO:0017888"],"synonyms":[{"name":"Renal Medullary Carcinoma","type":"exact"},{"name":"carcinoma of renal medulla","type":"exact"},{"name":"kidney medullary carcinoma","type":"exact"},{"name":"renal medulla carcinoma","type":"exact"},{"name":"renal medullary carcinoma","type":"exact"}],"termid":"MONDO:0006260","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0006260"}}}


id: GO:1900687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gerfelin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of gerfelin biosynthetic process","termid":"GO:1900686"},{"relation_name":"negatively_regulates","term_name":"gerfelin biosynthetic process","termid":"GO:1900578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gerfelin biosynthetic process","synonyms":[{"name":"down regulation of gerfelin anabolism","type":"exact"},{"name":"down regulation of gerfelin biosynthesis","type":"exact"},{"name":"down regulation of gerfelin biosynthetic process","type":"exact"},{"name":"down regulation of gerfelin formation","type":"exact"},{"name":"down regulation of gerfelin synthesis","type":"exact"},{"name":"down-regulation of gerfelin anabolism","type":"exact"},{"name":"down-regulation of gerfelin biosynthesis","type":"exact"},{"name":"down-regulation of gerfelin biosynthetic process","type":"exact"},{"name":"down-regulation of gerfelin formation","type":"exact"},{"name":"down-regulation of gerfelin synthesis","type":"exact"},{"name":"downregulation of gerfelin anabolism","type":"exact"},{"name":"downregulation of gerfelin biosynthesis","type":"exact"},{"name":"downregulation of gerfelin biosynthetic process","type":"exact"},{"name":"downregulation of gerfelin formation","type":"exact"},{"name":"downregulation of gerfelin synthesis","type":"exact"},{"name":"inhibition of gerfelin anabolism","type":"exact"},{"name":"inhibition of gerfelin biosynthesis","type":"exact"},{"name":"inhibition of gerfelin biosynthetic process","type":"narrow"},{"name":"inhibition of gerfelin formation","type":"exact"},{"name":"inhibition of gerfelin synthesis","type":"exact"},{"name":"negative regulation of gerfelin anabolism","type":"exact"},{"name":"negative regulation of gerfelin biosynthesis","type":"exact"},{"name":"negative regulation of gerfelin formation","type":"exact"},{"name":"negative regulation of gerfelin synthesis","type":"exact"}],"termid":"GO:1900687"}


id: GO:0102382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: rebaudioside B + UDP-alpha-D-glucose = rebaudioside A + UDP.","definition_xrefs":["RHEA:61760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"rebaudioside B glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13518"],"termid":"GO:0102382"}


id: PBO:0034209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-differs_in_attribute_of","termid":"PBO:0034209"}


id: FYPO:0004472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is abolished, and the protein is instead present in the nucleolus, during a cellular response to latrunculin B.","definition_xrefs":["PomBase:al","PMID:18951025","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to latrunculin B","synonyms":[{"name":"abolished protein localisation to cytoplasm with protein mislocalised to nucleolus during cellular response to latrunculin B","type":"exact"},{"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to LatB","type":"exact"},{"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to latrunculin B during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to latrunculin B during vegetative growth","type":"exact"},{"name":"protein localization to cytoplasm abolished with protein mislocalized to nucleolus during cellular response to latrunculin B","type":"exact"}],"termid":"FYPO:0004472"}


id: PBO:0090777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear membrane organization protein Apq12","termid":"PBO:0090777"}


id: PR:O14349
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30D10.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP-specific 5'-nucleotidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.03c","synonyms":[{"name":"Spom972h-SPBC30D10.03c","type":"exact"}],"termid":"PR:O14349"}


id: PBO:0088084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing substrate adaptor for Cdc48p; ubiquitin regulatory X domain-containing protein that acts as a substrate recruiting cofactor for Cdc48p; positively regulates Glc7p PPase activity to promote growth and mitotic progression in complex with Cdc48p; ubiquitinated protein interactor involved in ER-associated degradation (ERAD); regulated by nuclear Ub-dependent degradation (INMAD pathway) independent of the Asi and Doa10 complexes; homolog of human p47 (NSFL1C)","termid":"PBO:0088084"}


id: MONDO:0022898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis intellectual disability heart defects","secondary_identifiers":["GARD:1600"],"termid":"MONDO:0022898","xrefs":{"Monarch":{"xref_id":"0022898"}}}


id: GO:1900696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of N',N'',N'''-triacetylfusarinine C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of N',N'',N'''-triacetylfusarinine C biosynthetic process","termid":"GO:1900695"},{"relation_name":"negatively_regulates","term_name":"N',N'',N'''-triacetylfusarinine C biosynthetic process","termid":"GO:1900551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of N',N'',N'''-triacetylfusarinine C biosynthetic process","synonyms":[{"name":"down regulation of N',N'',N'''-triacetylfusarinine C anabolism","type":"exact"},{"name":"down regulation of N',N'',N'''-triacetylfusarinine C biosynthesis","type":"exact"},{"name":"down regulation of N',N'',N'''-triacetylfusarinine C biosynthetic process","type":"exact"},{"name":"down regulation of N',N'',N'''-triacetylfusarinine C formation","type":"exact"},{"name":"down regulation of N',N'',N'''-triacetylfusarinine C synthesis","type":"exact"},{"name":"down-regulation of N',N'',N'''-triacetylfusarinine C anabolism","type":"exact"},{"name":"down-regulation of N',N'',N'''-triacetylfusarinine C biosynthesis","type":"exact"},{"name":"down-regulation of N',N'',N'''-triacetylfusarinine C biosynthetic process","type":"exact"},{"name":"down-regulation of N',N'',N'''-triacetylfusarinine C formation","type":"exact"},{"name":"down-regulation of N',N'',N'''-triacetylfusarinine C synthesis","type":"exact"},{"name":"downregulation of N',N'',N'''-triacetylfusarinine C anabolism","type":"exact"},{"name":"downregulation of N',N'',N'''-triacetylfusarinine C biosynthesis","type":"exact"},{"name":"downregulation of N',N'',N'''-triacetylfusarinine C biosynthetic process","type":"exact"},{"name":"downregulation of N',N'',N'''-triacetylfusarinine C formation","type":"exact"},{"name":"downregulation of N',N'',N'''-triacetylfusarinine C synthesis","type":"exact"},{"name":"inhibition of N',N'',N'''-triacetylfusarinine C anabolism","type":"exact"},{"name":"inhibition of N',N'',N'''-triacetylfusarinine C biosynthesis","type":"exact"},{"name":"inhibition of N',N'',N'''-triacetylfusarinine C biosynthetic process","type":"narrow"},{"name":"inhibition of N',N'',N'''-triacetylfusarinine C formation","type":"exact"},{"name":"inhibition of N',N'',N'''-triacetylfusarinine C synthesis","type":"exact"},{"name":"negative regulation of N',N'',N'''-triacetylfusarinine C anabolism","type":"exact"},{"name":"negative regulation of N',N'',N'''-triacetylfusarinine C biosynthesis","type":"exact"},{"name":"negative regulation of N',N'',N'''-triacetylfusarinine C formation","type":"exact"},{"name":"negative regulation of N',N'',N'''-triacetylfusarinine C synthesis","type":"exact"}],"termid":"GO:1900696"}


id: SO:1000048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal translocation with two breaks; two chromosome segments have simply been exchanged.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_translocation","termid":"SO:1000044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reciprocal_chromosomal_translocation","synonyms":[{"name":"reciprocal chromosomal translocation","type":"exact"}],"termid":"SO:1000048"}


id: GO:0141176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A small RNA-based gene silencing process in which Piwi-associated RNAs (piRNAs) guide de novo DNA methylation. This results in a heterochromatin assembly, a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:32674113","PMID:38359823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA methylation-dependent constitutive heterochromatin formation","termid":"GO:0006346"},{"relation_name":"is_a","term_name":"piRNA-mediated heterochromatin formation","termid":"GO:0140966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"gene silencing by piRNA-directed DNA methylation","termid":"GO:0141176"}


id: PBO:0084159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity uridine permease, localizes to the plasma membrane; also mediates low but significant transport of the cytotoxic nucleoside analog 5-fluorouridine; not involved in uracil transport; relative distribution to the vacuole increases upon DNA replication stress","termid":"PBO:0084159"}


id: PBO:0043149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 17","termid":"PBO:0043149"}


id: MONDO:0035562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"human prion disease","termid":"MONDO:0018926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"acquired human prion disease","secondary_identifiers":["UMLS:C5680357","MEDGEN:1842786","GARD:22328","Orphanet:576360"],"synonyms":[{"name":"infectious human prion disease","type":"exact"}],"termid":"MONDO:0035562","xrefs":{"Monarch":{"xref_id":"0035562"}}}


id: MONDO:0009433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypoplastic left heart syndrome in which the cause of the disease is a mutation in the GJA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoplastic left heart syndrome","termid":"MONDO:0004933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypoplastic left heart syndrome 1","secondary_identifiers":["UMLS:C4551854","MEDGEN:1646779","OMIM:241550"],"synonyms":[{"name":"GJA1 hypoplastic left heart syndrome","type":"exact"},{"name":"HLHS","type":"broad"},{"name":"HLHS1","type":"related"},{"name":"hypoplastic left heart syndrome 1","type":"exact"},{"name":"hypoplastic left heart syndrome caused by mutation in GJA1","type":"exact"},{"name":"hypoplastic left heart syndrome type 1","type":"exact"}],"termid":"MONDO:0009433","xrefs":{"Monarch":{"xref_id":"0009433"}}}


id: MONDO:0011995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cataract-congenital heart disease-neural tube defect syndrome is a multiple congenital anomaly syndrome characterized by sacral neural tube defects resulting in tethered cord, atrial and/or ventricular septal heart defects (that are detected in infancy), bilateral, symmetrical hyperopia, rapidly progressive early childhood cataracts, bilateral aphakic glaucoma, and abnormal facial features (low frontal hairline, small ears, short philtrum, prominent, widely spaced central incisors, and micrognathia). hypotonia, growth and developmental delay, seizures, and joint limitation are also reported.","definition_xrefs":["Orphanet:314993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract - congenital heart disease - neural tube defect syndrome","secondary_identifiers":["OMIM:608227","GARD:17440","UMLS:C1842363","MEDGEN:330832","MESH:C564271"],"synonyms":[{"name":"craniofacial abnormalities, cataracts, congenital heart disease, sacral neural tube defects, and growth and developintellectual disability","type":"related"},{"name":"craniofacial abnormalities, cataracts, congenital heart disease, sacral neural tube defects, and growth and developmental retardation","type":"related"}],"termid":"MONDO:0011995","xrefs":{"Monarch":{"xref_id":"0011995"}}}


id: GO:0009745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of sucrose.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar mediated signaling pathway","termid":"GO:0010182"},{"relation_name":"part_of","term_name":"cellular response to sucrose stimulus","termid":"GO:0071329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sucrose mediated signaling","synonyms":[{"name":"sucrose mediated signalling","type":"exact"}],"termid":"GO:0009745"}


id: GO:0009492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2Fe-2S electron transfer carrier (obsolete GO:0009492)","synonyms":[{"name":"2Fe-2S electron transfer carrier","type":"exact"}],"termid":"GO:0009492"}


id: PBO:0071018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 20","termid":"PBO:0071018"}


id: MONDO:1012917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in pigs due to a mutation in the PSEN1 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, PSEN1-related, pig","secondary_identifiers":["OMIA:002493-9823"],"termid":"MONDO:1012917","xrefs":{"Monarch":{"xref_id":"1012917"}}}


id: PBO:0042461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 3","termid":"PBO:0042461"}


id: PBO:0113502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase; catalyzes the final step in tRNA splicing, transferring the 2'-PO(4) from the splice junction to NAD(+), forming ADP-ribose 1''-2''cyclic phosphate and nicotinamide; ADP-ribosyltransferase that ADP-ribosylates 5'-phosphorylated ssDNA and ssRNAs; human and mouse orthologs complement the inviability of the yeast null mutant","termid":"PBO:0113502"}


id: PBO:0065520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 2","termid":"PBO:0065520"}


id: GO:0035656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The activity of linking kinesins, cytoplasmic proteins responsible for moving vesicles and organelles towards the distal end of microtubules, to melanosomes.","definition_xrefs":["PMID:19841138"],"gene_count":0,"genotype_count":0,"name":"obsolete kinesin-associated melanosomal adaptor activity (obsolete GO:0035656)","synonyms":[{"name":"kinesin-melanosome adaptor activity","type":"exact"}],"termid":"GO:0035656"}


id: PBO:0045039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIX domain containing 1","termid":"PBO:0045039"}


id: GO:0005740
data:
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id: FYPO:0000020
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id: PBO:0069101
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id: GO:0061220
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id: PBO:0002405
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id: GO:0102135
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id: MONDO:0010495
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id: PBO:0055908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 32","termid":"PBO:0055908"}


id: PBO:0061470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding factor 2 pseudogene 5","termid":"PBO:0061470"}


id: GO:1905652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of artery morphogenesis.","definition_xrefs":["GOC:BHF","GOC:rph","PMID:27389411","GOC:TermGenie","GOC:BHF_miRNA","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of artery morphogenesis","termid":"GO:1905651"},{"relation_name":"is_a","term_name":"negative regulation of blood vessel morphogenesis","termid":"GO:2000181"},{"relation_name":"negatively_regulates","term_name":"artery morphogenesis","termid":"GO:0048844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of artery morphogenesis","synonyms":[{"name":"down regulation of arterial morphogenesis","type":"exact"},{"name":"down regulation of arteriogenesis","type":"exact"},{"name":"down regulation of artery morphogenesis","type":"exact"},{"name":"down-regulation of arterial morphogenesis","type":"exact"},{"name":"down-regulation of arteriogenesis","type":"exact"},{"name":"down-regulation of artery morphogenesis","type":"exact"},{"name":"downregulation of arterial morphogenesis","type":"exact"},{"name":"downregulation of arteriogenesis","type":"exact"},{"name":"downregulation of artery morphogenesis","type":"exact"},{"name":"inhibition of arterial morphogenesis","type":"narrow"},{"name":"inhibition of arteriogenesis","type":"narrow"},{"name":"inhibition of artery morphogenesis","type":"narrow"},{"name":"negative regulation of arterial morphogenesis","type":"exact"},{"name":"negative regulation of arteriogenesis","type":"exact"}],"termid":"GO:1905652"}


id: FYPO:0007177
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119856],"is_not":false,"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[119845,119846,119853,119857],"is_not":false,"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex of a cell is abolished during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex during vegetative growth","termid":"FYPO:0002555"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":2,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abolished protein localization to medial cortex during mitotic interphase","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"abolished protein localisation to medial cortex during mitotic interphase","type":"exact"},{"name":"abolished protein localization to medial cortex during interphase during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortex during interphase of mitotic cell cycle","type":"exact"},{"name":"abolished protein localization to medial ring during mitotic interphase","type":"exact"},{"name":"protein localization to medial cortex abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0007177","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0007177":null}}


id: MOD:00502
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes three hydrogen atoms of a residue with three iodine atoms.","definition_xrefs":["PubMed:15627961","Unimod:131","OMSSA:116","PubMed:2026710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodinated residue","termid":"MOD:00755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triiodinated residue","synonyms":[{"name":"I3Res","type":"exact"},{"name":"Triiodo","type":"related"},{"name":"tri-Iodination","type":"related"},{"name":"triiodinationy","type":"exact"}],"termid":"MOD:00502"}


id: PBO:0063508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDS5 cohesin associated factor A","termid":"PBO:0063508"}


id: MONDO:0002552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord disorder","termid":"MONDO:0002545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular myelopathy","secondary_identifiers":["ICD10CM:G95.1","ICD9:336.1","MEDGEN:509629","SCTID:29774004","UMLS:C0154685","DOID:320"],"synonyms":[{"name":"vascular myelopathies","type":"exact"}],"termid":"MONDO:0002552","xrefs":{"Monarch":{"xref_id":"0002552"}}}


id: PBO:0050845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"islet cell autoantigen 1","termid":"PBO:0050845"}


id: PBO:0064101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIWIL2 divergent transcript","termid":"PBO:0064101"}


id: MONDO:0001470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma arising from the perianal skin.","definition_xrefs":["NCIT:C6925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin squamous cell carcinoma","termid":"MONDO:0002529"},{"relation_name":"is_a","term_name":"anal margin carcinoma","termid":"MONDO:0002941"},{"relation_name":"is_a","term_name":"anal squamous cell carcinoma","termid":"MONDO:0006082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"anal margin squamous cell carcinoma","secondary_identifiers":["ICD9:173.5","SCTID:255084004","DOID:12239","MEDGEN:278071","UMLS:C1412037"],"synonyms":[{"name":"anal margin squamous cell carcinoma","type":"exact"},{"name":"perianal skin squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of anal margin","type":"exact"},{"name":"squamous cell carcinoma of the anal margin","type":"exact"}],"termid":"MONDO:0001470","xrefs":{"Monarch":{"xref_id":"0001470"}}}


id: PBO:0072508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 37","termid":"PBO:0072508"}


id: PBO:0077324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 62","termid":"PBO:0077324"}


id: PBO:0080132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VANGL planar cell polarity protein 2","termid":"PBO:0080132"}


id: PBO:0091672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific Smp foci lncRNA Sme2, short isoform","termid":"PBO:0091672"}


id: MONDO:0019254
data:
  {"annotated_genes":["SJAG_00964","SJAG_03247","SJAG_04334","SJAG_01359","SJAG_04192","SJAG_02850","SJAG_01859","SJAG_00461","SJAG_04495","SJAG_00605","SJAG_03811","SJAG_04681","SJAG_03660","SJAG_00839","SJAG_02796","SJAG_04882","SJAG_02369","SJAG_02107","SJAG_03797","SJAG_02009","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013869"},{"annotations":[85818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007068"},{"annotations":[86953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012099"},{"annotations":[87414,87413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011534"},{"annotations":[86537,86538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010699"},{"annotations":[86366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014719"},{"annotations":[85470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014647"},{"annotations":[85510,85511,85512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013046"},{"annotations":[87585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010392"},{"annotations":[86195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009865"},{"annotations":[86033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[86536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[86844,86845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[86519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010299"},{"annotations":[86518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010298"},{"annotations":[87617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014674"},{"annotations":[85495,85496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007453"},{"annotations":[86818,86819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[86764,86765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"},{"annotations":[87593,87592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010395"},{"annotations":[86838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013171"},{"annotations":[85954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[86145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_00964":null,"SJAG_01359":null,"SJAG_01859":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02850":null,"SJAG_03247":null,"SJAG_03660":null,"SJAG_03797":null,"SJAG_03811":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04681":null,"SJAG_04882":null,"SJAG_06634":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of purine or pyrimidine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D011686","MedDRA:10037546","GARD:18980","UMLS:C0034139","ICD9:277.2","DOID:653","Orphanet:79224","MEDGEN:48263"],"synonyms":[{"name":"disorder of purine or pyrimidine metabolism","type":"related"},{"name":"inborn errors of purine-pyrimidine metabolism","type":"exact"},{"name":"inborn purine-pyrimidine metabolic disorder","type":"exact"},{"name":"purine-pyrimidine metabolic disorder","type":"related"}],"termid":"MONDO:0019254","terms_by_termid":{"MONDO:0007068":null,"MONDO:0007453":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009865":null,"MONDO:0009950":null,"MONDO:0010298":null,"MONDO:0010299":null,"MONDO:0010392":null,"MONDO:0010395":null,"MONDO:0010699":null,"MONDO:0011236":null,"MONDO:0011534":null,"MONDO:0012099":null,"MONDO:0013046":null,"MONDO:0013171":null,"MONDO:0013275":null,"MONDO:0013869":null,"MONDO:0014221":null,"MONDO:0014647":null,"MONDO:0014674":null,"MONDO:0014719":null,"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0019254"}}}


id: MONDO:0001449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of meningitis caused by lymphocytic choriomeningitis virus. mice and other rodents serve as the natural hosts, and infection in humans usually occurs through inhalation or ingestion of infectious particles. Clinical manifestations include an influenza-like syndrome followed by stiff neck, alterations of mentation, ataxia, and incontinence. Maternal infections may result in fetal malformations and injury, including neonatal hydrocephalus, aqueductal stenosis, chorioretinitis, and microcephaly. (From Joynt, Clinical Neurology, 1996, Ch26, pp1-3)","definition_xrefs":["MESH:D008216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Arenaviridae infectious disease","termid":"MONDO:0005650"},{"relation_name":"is_a","term_name":"viral meningitis","termid":"MONDO:0007015"},{"relation_name":"is_a","term_name":"viral infection of central nervous system","termid":"MONDO:0024318"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocytic choriomeningitis","secondary_identifiers":["ICD9:049.0","MEDGEN:44220","UMLS:C0024266","DOID:12155","ICD10CM:A87.2","icd11.foundation:307264938"],"synonyms":[{"name":"LCM","type":"exact"},{"name":"lymphocytic choriomeningitis mammarenavirus caused infectious meningitis","type":"exact"},{"name":"lymphocytic choriomeningitis mammarenavirus infectious meningitis","type":"exact"},{"name":"lymphocytic choriomeningitis virus encephalomyelitis","type":"exact"},{"name":"lymphocytic meningitis","type":"broad"},{"name":"lymphocytic meningoencephalitis","type":"exact"}],"termid":"MONDO:0001449","xrefs":{"Monarch":{"xref_id":"0001449"}}}


id: PBO:0067928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 230","termid":"PBO:0067928"}


id: FYPO:0003714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to Skb1-containing lateral cortical nodes is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:25009287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to lateral cortical node","termid":"FYPO:0003713"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to lateral cortical node, with protein mislocalised to cytoplasm","type":"exact"},{"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to lateral cortical node abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0003714"}


id: FYPO:0006005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring localization is normal (i.e. indistinguishable from wild type). Actomyosin contractile ring localization is the part of cytokinesis in which the actomyosin contractile ring is assembled and/or maintained in a specific location.","definition_xrefs":["PomBase:mah","GO:1902405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal actomyosin contractile ring organization","termid":"FYPO:0007827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal actomyosin contractile ring localization","synonyms":[{"name":"normal actomyosin contractile ring localisation","type":"exact"},{"name":"normal actomyosin contractile ring localization during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring localization during vegetative growth","type":"exact"},{"name":"normal actomyosin contractile ring positioning","type":"exact"},{"name":"normal cytokinetic contractile ring localization","type":"exact"},{"name":"normal mitotic actomyosin contractile ring localization","type":"exact"},{"name":"normal mitotic contractile ring localization","type":"exact"}],"termid":"FYPO:0006005"}


id: GO:0001780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of neutrophils such that the total number of neutrophils within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:12752675","GOC:add","GOC:pr","PMID:12960266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"},{"relation_name":"is_a","term_name":"myeloid cell homeostasis","termid":"GO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil homeostasis","termid":"GO:0001780"}


id: GO:1902205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-2-mediated signaling pathway.","definition_xrefs":["PMID:11909529","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-2-mediated signaling pathway","termid":"GO:0038110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-2-mediated signaling pathway","synonyms":[{"name":"regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"regulation of interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:1902205"}


id: MONDO:0019928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The 48,XXXY syndrome represents a chromosomal anomaly of the aneuploidic type characterized by the presence of two extra X chromosomes in males.","definition_xrefs":["Orphanet:96263"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"sex chromosome disorder of sex development","termid":"MONDO:0017975"},{"relation_name":"is_a","term_name":"tetrasomy","termid":"MONDO:0030502"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"48,XXXY syndrome","secondary_identifiers":["NCIT:C89799","ICD9:758.81","SCTID:78317008","MedDRA:10048228","MEDGEN:452344","UMLS:C0265498","GARD:5676"],"synonyms":[{"name":"48, XXXY syndrome","type":"exact"},{"name":"XXXY syndrome","type":"related"}],"termid":"MONDO:0019928","xrefs":{"Monarch":{"xref_id":"0019928"}}}


id: PBO:0081720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 649","termid":"PBO:0081720"}


id: MONDO:0041526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy disorder with abortive outcome","secondary_identifiers":["UMLS:C0156543","MEDGEN:102352","ICD10CM:O00-O08","SCTID:363681007"],"synonyms":[{"name":"IUFD","type":"exact"},{"name":"intrauterine fetal death","type":"exact"},{"name":"intrauterine fetal demise","type":"exact"},{"name":"pregnancy with abortive outcome","type":"related"},{"name":"stillbirth","type":"exact"}],"termid":"MONDO:0041526","xrefs":{"Monarch":{"xref_id":"0041526"}}}


id: PBO:0091062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid/polyamine transporter","termid":"PBO:0091062"}


id: PBO:0063472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 2","termid":"PBO:0063472"}


id: MOD:00109
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to L-valine amide.","definition_xrefs":["PubMed:2578459","PubMed:5465996","RESID:AA0100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine amide","synonyms":[{"name":"(2S)-2-amino-3-methylbutanamide","type":"exact"},{"name":"L-valine amide","type":"exact"},{"name":"MOD_RES Valine amide","type":"exact"},{"name":"ValN","type":"exact"},{"name":"valinamide","type":"exact"}],"termid":"MOD:00109"}


id: GO:0141079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont subverts an inflammasome-mediated signal transduction pathway in the host organism by initiating, promoting, or enhancing its activation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:34155776","PMID:25538194","PMID:30872531","PMID:28331908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated activation of host signal transduction pathway","termid":"GO:0052028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host inflammasome-mediated signal transduction","synonyms":[{"name":"perturbation of host inflammasome-mediated signal transduction","type":"broad"}],"termid":"GO:0141079"}


id: PBO:0054421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1817","termid":"PBO:0054421"}


id: MONDO:1012048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar cortical atrophy, non-human animal","termid":"MONDO:1011836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar cortical atrophy, sheep","secondary_identifiers":["OMIA:000177-9940"],"termid":"MONDO:1012048","xrefs":{"Monarch":{"xref_id":"1012048"}}}


id: MONDO:0034819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare familial intestinal malformation characterized by failure of the rotation of the developing gastrointestinal tract around the superior mesenteric artery during embryonic development, resulting in a spectrum of abnormalities of intestinal position and fixation. Patients most typically present in the neonatal period with midgut volvulus, which can lead to short bowel syndrome or even death. Signs and symptoms include bilious vomiting, feeding intolerance, failure to thrive, constipation, bloody stools, or intermittent apnea. The condition may also manifest later in life with complications like kinking or hernias and a broad range of intestinal symptoms. It can be an isolated finding or occur in association with other anomalies.","definition_xrefs":["Orphanet:508410"],"gene_count":0,"genotype_count":0,"name":"obsolete familial intestinal malrotation (obsolete MONDO:0034819)","termid":"MONDO:0034819","xrefs":{"Monarch":{"xref_id":"0034819"}}}


id: MONDO:0018406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare male infertility due to adrenal disorder of genetic origin (obsolete MONDO:0018406)","secondary_identifiers":["Orphanet:399994"],"termid":"MONDO:0018406","xrefs":{"Monarch":{"xref_id":"0018406"}}}


id: GO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the lens are generated and organized. The lens is a transparent structure in the eye through which light is focused onto the retina. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:dph","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"lens development in camera-type eye","termid":"GO:0002088"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens morphogenesis in camera-type eye","synonyms":[{"name":"lens morphogenesis","type":"exact"},{"name":"lens morphogenesis in camera-style eye","type":"exact"}],"termid":"GO:0002089"}


id: FYPO:0005791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a shmoo forms with normal morphology, but in an abnormal location.","definition_xrefs":["PMID:23200991","GO:0000753","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"developmental process phenotype","termid":"FYPO:0000679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000301"],"is_obsolete":false,"name":"abnormal shmoo directionality","synonyms":[{"name":"abnormal cell morphogenesis involved in conjugation with cellular fusion","type":"exact"},{"name":"abnormal shmoo orientation","type":"narrow"}],"termid":"FYPO:0005791"}


id: PBO:0049682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase","termid":"PBO:0049682"}


id: PBO:0077730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 18 pseudogene 2","termid":"PBO:0077730"}


id: GO:0039694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The replication of a viral RNA genome.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral genome replication","termid":"GO:0019079"},{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral RNA genome replication","termid":"GO:0039694"}


id: FYECO:0000104
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium containing a low concentration of glucose (~0.5%) as carbon source, salts and water.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low glucose MM","synonyms":[{"name":"low glucose minimal medium","type":"exact"}],"termid":"FYECO:0000104"}


id: GO:0042959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an alkanesulfonate from one side of a membrane to the other according to the reaction: ATP + H2O + alkanesulfonate(out) = ADP + phosphate + alkanesulfonate(in).","definition_xrefs":["PMID:10506196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"ATPase-coupled organic acid transmembrane transporter activity","termid":"GO:0033283"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type alkanesulfonate transporter transporter activity","synonyms":[{"name":"alkanesulfonate transmembrane transporter activity","type":"broad"},{"name":"alkanesulfonate transporter activity","type":"related"},{"name":"alkanesulphonate transporter activity","type":"exact"}],"termid":"GO:0042959"}


id: GO:0003434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the progression of a growth plate cartilage chondrocyte over time.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in growth plate cartilage chondrocyte development (obsolete GO:0003434)","synonyms":[{"name":"BMP signalling pathway involved in growth plate cartilage chondrocyte development","type":"exact"}],"termid":"GO:0003434"}


id: PBO:0074867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 51","termid":"PBO:0074867"}


id: PBO:0047166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 193 member B","termid":"PBO:0047166"}


id: PBO:0036000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_medial_cortical_node_condensation","termid":"PBO:0036000"}


id: PR:O74497
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC285.10c gene.","definition_xrefs":["UniProtKB:O74497","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain-containing protein C285.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.10c","synonyms":[{"name":"Spom972h-SPCC285.10c","type":"exact"}],"termid":"PR:O74497"}


id: MONDO:0011978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"CoQ-responsive OXPHOS deficiency","secondary_identifiers":["MESH:C535470","OMIM:608158","MEDGEN:334164","UMLS:C1842463"],"synonyms":[{"name":"CoQ-responsive OXPHOS deficiency","type":"exact"},{"name":"CoQ-responsive oxidative phosphorylation disorder","type":"exact"}],"termid":"MONDO:0011978","xrefs":{"Monarch":{"xref_id":"0011978"}}}


id: GO:0009528
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the plastid envelope; also faces the plastid stroma.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle inner membrane","termid":"GO:0019866"},{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid inner membrane","termid":"GO:0009528"}


id: GO:0021703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the locus ceruleus over time, from its formation to the mature structure. The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic.","definition_xrefs":["ISBN:0838580343","GOC:jid","GOC:dgh","GOC:dph","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locus ceruleus development","synonyms":[{"name":"locus caeruleus development","type":"exact"},{"name":"locus coeruleus development","type":"exact"}],"termid":"GO:0021703"}


id: PBO:0064474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLE4 pseudogene 1","termid":"PBO:0064474"}


id: PBO:0005564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC2 subunit Bit61","termid":"PBO:0005564"}


id: PBO:0109451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chibby 1, beta catenin antagonist","termid":"PBO:0109451"}


id: FYPO:0004863
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form microtubules that are longer than normal and are curved, i.e. follow a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"has_part","term_name":"curved microtubules","termid":"FYPO:0004862"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002399","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"long curved microtubules","synonyms":[{"name":"elongated curved microtubules","type":"exact"},{"name":"long curved microtubules during mitotic cell cycle","type":"related"},{"name":"long curved microtubules during vegetative growth","type":"exact"},{"name":"microtubule organization defects, long curved microtubules","type":"exact"}],"termid":"FYPO:0004863"}


id: PBO:0054375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1770","termid":"PBO:0054375"}


id: PBO:0068283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 subunit A","termid":"PBO:0068283"}


id: PBO:0055311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2739","termid":"PBO:0055311"}


id: PBO:0079083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon ATA) 1-1","termid":"PBO:0079083"}


id: PBO:0085776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein necessary for stability of L-A dsRNA-containing particles","termid":"PBO:0085776"}


id: PBO:0036341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human C2orf76 ortholog, implicated in mitochondrial organisation","termid":"PBO:0036341"}


id: GO:0002685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte migration.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"leukocyte migration","termid":"GO:0050900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte migration","synonyms":[{"name":"regulation of immune cell migration","type":"exact"},{"name":"regulation of leucocyte migration","type":"exact"}],"termid":"GO:0002685"}


id: PR:O94359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC428.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C428.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.12c","synonyms":[{"name":"Spom972h-SPBC428.12c","type":"exact"}],"termid":"PR:O94359"}


id: MONDO:0029051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive nail dysplasia is a rare, isolated nail anomaly characterized by claw-shaped, thick, hyperplastic, hard and hyperpigmented nails, subungual hyperkeratosis, onycholysis and slow nail growth. Variable degree of disease severity has been reported. [Orphanet:280654]","definition_xrefs":["Orphanet:280654"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive nail dysplasia (obsolete MONDO:0029051)","secondary_identifiers":["ICD10CM:Q84.6"],"termid":"MONDO:0029051","xrefs":{"Monarch":{"xref_id":"0029051"}}}


id: MONDO:0003154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the peripheral nerves.","definition_xrefs":["NCIT:C27507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system hemangioma","termid":"MONDO:0003241"},{"relation_name":"is_a","term_name":"benign neoplasm of peripheral nervous system","termid":"MONDO:0056804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangioma of peripheral nerve","secondary_identifiers":["DOID:482","UMLS:C1333956","MEDGEN:232595"],"synonyms":[{"name":"hemangioma of nerve","type":"exact"},{"name":"hemangioma of peripheral nerve","type":"exact"},{"name":"nerve hemangioma","type":"exact"}],"termid":"MONDO:0003154","xrefs":{"Monarch":{"xref_id":"0003154"}}}


id: MONDO:0015403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-involuting congenital hemangioma (NICH) is a rare type of infantile hemangioma, which is a tumor that forms from the abnormal growth of blood vessels in the skin. NICH looks like an oval,purplish mark or bump that can occur on any part of the body. NICH is present from birth (congenital) and increases in size as the child grows. Unlike other hemangiomas, NICH do not disappear spontaneously (involute).","definition_xrefs":["GARD:0010890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hemangioma","termid":"MONDO:0018715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-involuting congenital hemangioma","secondary_identifiers":["MEDGEN:698685","SCTID:703295003","Orphanet:141179","NCIT:C172208","UMLS:C1275417","GARD:10890"],"synonyms":[{"name":"NICH","type":"exact"},{"name":"noninvoluting congenital hemangioma","type":"exact"}],"termid":"MONDO:0015403","xrefs":{"Monarch":{"xref_id":"0015403"}}}


id: MONDO:0011757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"brachydactyly type A1","termid":"MONDO:0007215"},{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A1B","secondary_identifiers":["UMLS:C1846949","MEDGEN:339652","MESH:C564635","DOID:0110974","GARD:15407","OMIM:607004"],"synonyms":[{"name":"BDA1B","type":"exact"},{"name":"brachydactyly, type A1, B","type":"related"}],"termid":"MONDO:0011757","xrefs":{"Monarch":{"xref_id":"0011757"}}}


id: PBO:0055451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2883","termid":"PBO:0055451"}


id: MONDO:0019756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lobar holoprosencephaly is the mildest classical form of holoprosencephaly (HPE) characterized by separation of the right and left cerebral hemispheres and lateral ventricules with some continuity across the frontal neocortex, especially rostrally and ventrally.","definition_xrefs":["Orphanet:93924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lobar holoprosencephaly","secondary_identifiers":["GARD:16830","SCTID:253136007","UMLS:C0431362","icd11.foundation:121649206","MEDGEN:96559"],"termid":"MONDO:0019756","xrefs":{"Monarch":{"xref_id":"0019756"}}}


id: GO:0090501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The RNA metabolic process in which the phosphodiester bonds between ribonucleotides are cleaved by hydrolysis.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA phosphodiester bond hydrolysis (obsolete GO:0090501)","termid":"GO:0090501"}


id: PBO:0065347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin like 2C","termid":"PBO:0065347"}


id: PBO:0080967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB7C antisense RNA 1","termid":"PBO:0080967"}


id: GO:0072655
data:
  {"annotated_genes":["SJAG_04218","SJAG_00196","SJAG_04208","SJAG_01951","SJAG_02397","SJAG_02809","SJAG_00373","SJAG_03416","SJAG_04641","SJAG_00687","SJAG_07010","SJAG_04072","SJAG_03415","SJAG_02077","SJAG_02016","SJAG_01780","SJAG_02361","SJAG_01004","SJAG_05302","SJAG_04533","SJAG_01597","SJAG_02917","SJAG_04432","SJAG_05259","SJAG_02398","SJAG_01647","SJAG_03502","SJAG_03648","SJAG_04996","SJAG_03358","SJAG_03515","SJAG_00404","SJAG_01879","SJAG_01442","SJAG_01405","SJAG_02034","SJAG_01917","SJAG_02355","SJAG_00569","SJAG_01640","SJAG_02524","SJAG_01949","SJAG_01120","SJAG_04336","SJAG_05300","SJAG_02797","SJAG_03633","SJAG_01560","SJAG_04014","SJAG_01684","SJAG_01615","SJAG_00564","SJAG_03560"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97461,95388,98814],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160203"},{"annotations":[77536,77917],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0045041"},{"annotations":[97214,103009,107876,99750,112107,89881,99864,100638,88672,91236,99566,106494,107821,115533,103596,94856,105508,107898,117081,110184,117549],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0030150"},{"annotations":[107877,75972,78224,88998,113503,74345,116569,73837,103237,107899,90732],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0045039"},{"annotations":[58339,78903,74790,78644,78854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[59099,98555,98906,110354,110708,70313,76946,107878,112101],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0045040"},{"annotations":[78560,80557,70201,80326,102524,77196],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"},{"annotations":[98719,102774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006626"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to the mitochondrion or a part of the mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to mitochondrion","termid":"GO:0070585"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00373":null,"SJAG_00404":null,"SJAG_00564":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01004":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01647":null,"SJAG_01684":null,"SJAG_01780":null,"SJAG_01879":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02016":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02397":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_02797":null,"SJAG_02809":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03633":null,"SJAG_03648":null,"SJAG_04014":null,"SJAG_04072":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_07010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to mitochondrion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to mitochondrion","type":"exact"},{"name":"establishment of protein localization in mitochondrion","type":"exact"}],"termid":"GO:0072655","terms_by_termid":{"GO:0006626":null,"GO:0006627":null,"GO:0030150":null,"GO:0032979":null,"GO:0045039":null,"GO:0045040":null,"GO:0045041":null,"GO:0160203":null}}


id: PBO:0078077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAM2 antisense RNA 1 (head to head)","termid":"PBO:0078077"}


id: PBO:0069065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 312, pseudogene","termid":"PBO:0069065"}


id: GO:0061891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of calcium ions (Ca2+).","definition_xrefs":["PMID:16005298","PMID:28151650","PMID:17020874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sensor activity","termid":"GO:0140784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0140299","GO:0098772"],"is_obsolete":false,"name":"calcium ion sensor activity","termid":"GO:0061891"}


id: GO:0008898
data:
  {"annotated_genes":["SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76753],"is_not":false,"summary":null,"term":"GO:0008898"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + L-homocysteine = S-adenosyl-L-homocysteine + L-methionine.","definition_xrefs":["RHEA:21820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"S-adenosylmethionine-homocysteine S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"L-homocysteine S-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-homocysteine methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine homocysteine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine-homocysteine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine:homocysteine methyltransferase activity","type":"related"},{"name":"adenosylmethionine transmethylase activity","type":"related"},{"name":"adenosylmethionine:homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine transmethylase activity","type":"related"}],"termid":"GO:0008898","terms_by_termid":{"GO:0008898":null}}


id: PBO:0031544
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_targeting_to_vacuole","termid":"PBO:0031544"}


id: MONDO:0700176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that occurs in cats. It is associated with exposure to feline leukemia virus and feline immunodeficiency virus.","definition_xrefs":["NCIT:C132193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline lymphoma","secondary_identifiers":["OMIA:001733-9685"],"termid":"MONDO:0700176","xrefs":{"Monarch":{"xref_id":"0700176"}}}


id: PBO:0074022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 15","termid":"PBO:0074022"}


id: GO:0060074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that organizes a synapse so that it attains its fully functional state. Synaptic maturation plays a critical role in the establishment of effective synaptic connections in early development.","definition_xrefs":["GOC:ef","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"},{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synapse maturation","synonyms":[{"name":"synaptic maturation","type":"exact"}],"termid":"GO:0060074"}


id: GO:1905523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage migration.","definition_xrefs":["PMID:25749876","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of macrophage migration","termid":"GO:1905521"},{"relation_name":"positively_regulates","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage migration","synonyms":[{"name":"activation of macrophage migration","type":"narrow"},{"name":"up regulation of macrophage migration","type":"exact"},{"name":"up-regulation of macrophage migration","type":"exact"},{"name":"upregulation of macrophage migration","type":"exact"}],"termid":"GO:1905523"}


id: PR:O43087
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kms2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyogamy meiotic segregation protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.12","synonyms":[{"name":"Spom972h-kms2","type":"exact"}],"termid":"PR:O43087"}


id: GO:0098020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the viral tail that comprises the least common subunit type.","definition_xrefs":["GOC:bm"],"gene_count":0,"genotype_count":0,"name":"obsolete virus tail, minor subunit (obsolete GO:0098020)","synonyms":[{"name":"bacteriophage minor protein subunit","type":"narrow"},{"name":"minor tail protein","type":"related"}],"termid":"GO:0098020"}


id: PBO:0000276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF hand","termid":"PBO:0000276"}


id: PBO:0076172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1C member 3","termid":"PBO:0076172"}


id: PBO:0061855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin family member 5, pseudogene","termid":"PBO:0061855"}


id: PBO:0017590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-ATPase chaperone Atp11 (predicted)","termid":"PBO:0017590"}


id: PBO:0046673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ess-2 splicing factor homolog","termid":"PBO:0046673"}


id: RO:0002479
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p has part that occurs in c if and only if there exists some p1, such that p has_part p1, and p1 occurs in c.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_part_that_occurs_in","termid":"RO:0002479"}


id: PR:Q9P7J9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.06","synonyms":[{"name":"Spom972h-SPCC24B10.06","type":"exact"}],"termid":"PR:Q9P7J9"}


id: GO:0005655
data:
  {"annotated_genes":["SJAG_02553","SJAG_03796","SJAG_00306","SJAG_00955","SJAG_04916","SJAG_03234","SJAG_04582","SJAG_06613","SJAG_01623","SJAG_02547","SJAG_01369"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60628,63763,71536,71975,72009,91425,99812,104870,115607,115695,118891],"is_not":false,"summary":null,"term":"GO:0005655"}]},"cv_name":"cellular_component","definition":"A ribonuclease P complex located in the nucleolus of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. Eukaryotic nucleolar ribonuclease P complexes generally contain a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules.","definition_xrefs":["PMID:12045094","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multimeric ribonuclease P complex","termid":"GO:0030681"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00955":null,"SJAG_01369":null,"SJAG_01623":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03796":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005730","GO:0032991"],"is_obsolete":false,"name":"nucleolar ribonuclease P complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleolar RNase P complex","type":"exact"}],"termid":"GO:0005655","terms_by_termid":{"GO:0005655":null}}


id: GO:0160072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together an ubiquitin ligase and an ubiquitin ligase-substrate adaptor, permitting those molecules to function in a coordinated way.","definition_xrefs":["PMID:27664236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"ubiquitin ligase complex scaffold activity","synonyms":[{"name":"core protein activity for the CUL-RING ubiquitin ligase complex","type":"narrow"}],"termid":"GO:0160072"}


id: FYPO:0006283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dihydroxylation of one or more proline residues in specific proteins, or at specific protein sites, does not occur.","definition_xrefs":["PomBase:mah","PMID:29083304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein-proline dihydroxylation during vegetative growth","synonyms":[{"name":"abolished protein-proline dihydroxylation during mitotic cell cycle","type":"related"},{"name":"abolished protein-proline dioxygenation during vegetative growth","type":"exact"},{"name":"protein-proline dihydroxylation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006283"}


id: GO:1901864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving capsorubin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"capsorubin metabolic process","synonyms":[{"name":"capsorubin metabolism","type":"exact"}],"termid":"GO:1901864"}


id: PBO:0031046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_anisomycin","termid":"PBO:0031046"}


id: PBO:0029749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cytosolic_calcium_level","termid":"PBO:0029749"}


id: FYPO:0003835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which horsetail movement is normal (i.e. indistinguishable from wild type). Horsetail movement is the oscillatory movement of the nucleus that takes place during meiotic prophase I.","definition_xrefs":["PomBase:mah","GO:0030989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"},{"relation_name":"is_a","term_name":"normal nucleus positioning","termid":"FYPO:0001389"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal horsetail movement","synonyms":[{"name":"normal dynein-driven meiotic oscillatory nuclear movement","type":"exact"},{"name":"normal horsetail nuclear movement","type":"exact"}],"termid":"FYPO:0003835"}


id: PR:O94653
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein BMS1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02379","PRO:DNx","PANTHER:PTHR12858:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein bms1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.06","secondary_identifiers":["UniProtKB:O94653"],"synonyms":[{"name":"Spom972h-BMS1","type":"exact"}],"termid":"PR:O94653"}


id: FYPO:0007822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which vacuoles are larger than normal in G0 phase.","definition_xrefs":["PMID:34147496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large vacuoles","termid":"FYPO:0007821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"large vacuoles during G0","synonyms":[{"name":"enlarged vacuoles during G0","type":"exact"},{"name":"large vacuoles during cell quiescence","type":"exact"},{"name":"large vacuoles during quiescence","type":"exact"}],"termid":"FYPO:0007822"}


id: GO:0090574
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase V promoter.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"RNA polymerase V transcription repressor complex","termid":"GO:0090574"}


id: PBO:0031651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_re-entry_into_mitotic_cell_cycle_after_pheromone_arrest","termid":"PBO:0031651"}


id: GO:0007638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior that is dependent upon the sensation of a mechanical stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"part_of","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanosensory behavior","synonyms":[{"name":"behavioral response to mechanical stimulus","type":"exact"},{"name":"behavioural response to mechanical stimulus","type":"exact"},{"name":"mechanosensory behaviour","type":"exact"}],"termid":"GO:0007638"}


id: PBO:0049370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA","termid":"PBO:0049370"}


id: GO:0044387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stopping, prevention, or reduction in frequency, rate or extent of protein kinase activity as a result of regulating the phosphorylation status of that protein kinase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein kinase activity by regulation of protein phosphorylation","termid":"GO:0044387"}


id: GO:0015187
data:
  {"annotated_genes":["SJAG_00626","SJAG_04984"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70288,78201],"is_not":false,"summary":null,"term":"GO:0015187"}]},"cv_name":"molecular_function","definition":"Enables the transfer of glycine from one side of a membrane to the other. Glycine is aminoethanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00626":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glycine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"glycine betaine/proline porter activity","type":"narrow"},{"name":"glycine transporter activity","type":"broad"},{"name":"proline/glycine/betaine:hydrogen/sodium symporter activity","type":"narrow"}],"termid":"GO:0015187","terms_by_termid":{"GO:0015187":null}}


id: PBO:0045725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 6 pseudogene 2","termid":"PBO:0045725"}


id: PBO:0018072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily protein","termid":"PBO:0018072"}


id: GO:1903682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell-cell adhesion involved in epithelium migration.","definition_xrefs":["GOC:als","GO_REF:0000058","PMID:18394891","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:1903681"},{"relation_name":"negatively_regulates","term_name":"epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:0090137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of epithelial cell-cell adhesion involved in epithelium migration","synonyms":[{"name":"down regulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"},{"name":"down-regulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"},{"name":"downregulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"},{"name":"inhibition of epithelial cell-cell adhesion involved in epithelium migration","type":"narrow"}],"termid":"GO:1903682"}


id: PBO:0075858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 6, pseudogene","termid":"PBO:0075858"}


id: PBO:0070276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 17","termid":"PBO:0070276"}


id: PR:G2TRT0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.04c gene.","definition_xrefs":["UniProtKB:G2TRT0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synembryn-like protein C3E7.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.04c","synonyms":[{"name":"Spom972h-SPBC3E7.04c","type":"exact"}],"termid":"PR:G2TRT0"}


id: MONDO:0021010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm of the skin arising from the lymphatic vessels.","definition_xrefs":["NCIT:C4490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangiosarcoma","termid":"MONDO:0006282"},{"relation_name":"is_a","term_name":"skin sarcoma","termid":"MONDO:0006414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"skin lymphangiosarcoma","secondary_identifiers":["ICD9:171.2","UMLS:C0346082","SCTID:62497000","MEDGEN:87536"],"synonyms":[{"name":"lymphangiosarcoma of Stewart and Treves","type":"exact"},{"name":"lymphangiosarcoma of skin","type":"exact"},{"name":"lymphangiosarcoma of the skin","type":"exact"},{"name":"skin lymphangiosarcoma","type":"exact"}],"termid":"MONDO:0021010","xrefs":{"Monarch":{"xref_id":"0021010"}}}


id: FYPO:0001935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of proton-transporting ATP synthase activity by a rotational mechanism is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"},{"relation_name":"is_a","term_name":"abnormal proton transport","termid":"FYPO:0005971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000138","FYPO:0005447","FYPO:0002114","FYPO:0000002","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal proton-transporting ATP synthase activity, rotational mechanism","synonyms":[{"name":"abnormal hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"abnormal mitochondrial proton-transporting ATP synthase activity","type":"narrow"},{"name":"abnormal proton-transporting ATP synthase activity","type":"related"}],"termid":"FYPO:0001935"}


id: PBO:0070399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ROS proto-oncogene 1, receptor tyrosine kinase","termid":"PBO:0070399"}


id: PBO:0062761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily P member 1 (gene/pseudogene)","termid":"PBO:0062761"}


id: PBO:0082458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ca2+-dependent cysteine protease; may cleave specific substrates during the stress response; regulates apoptosis upon H2O2 treatment; required for clearance of insoluble protein aggregates during normal growth; implicated in cell cycle dynamics and lifespan extension; undergoes autocatalytic processing; similar to mammalian metacaspases, but exists as a monomer due to an extra pair of anti-parallel beta-strands that block potential dimerization","termid":"PBO:0082458"}


id: PBO:0057014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 103b-1","termid":"PBO:0057014"}


id: GO:1990596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of an acetyl group from lysine at position 4 of the histone.","definition_xrefs":["PMID:20299449"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 deacetylation (obsolete GO:1990596)","termid":"GO:1990596"}


id: GO:0015500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (threonine or serine)(out) + Na+(out) = (threonine or serine)(in) + Na+(in).","definition_xrefs":["TC:2.A.23.4.1"],"gene_count":0,"genotype_count":0,"name":"obsolete threonine/serine:sodium symporter activity (obsolete GO:0015500)","synonyms":[{"name":"threonine/serine:sodium symporter activity","type":"exact"}],"termid":"GO:0015500"}


id: PBO:0113016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bacterially-derived sulfatase; required for use of alkyl sulfates as sulfur source","termid":"PBO:0113016"}


id: MONDO:0017730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metachromatic leukodystrophy, juvenile form","termid":"MONDO:0009591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0002039","MONDO:0002525","MONDO:0005559","MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"metachromatic leukodystrophy, adult form","secondary_identifiers":["MEDGEN:199625","GARD:21330","NANDO:1200081","NANDO:2201204","Orphanet:309271","SCTID:24326000","UMLS:C0751279"],"synonyms":[{"name":"MLD, adult form","type":"exact"},{"name":"arylsulfatase A deficiency, adult form","type":"exact"}],"termid":"MONDO:0017730","xrefs":{"Monarch":{"xref_id":"0017730"}}}


id: FYPO:0000756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to bafilomycin A1. Cells stop growing (and may die) at a concentration of bafilomycin A1 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to bafilomycin A1","synonyms":[{"name":"hypersensitive to bafilomycin A1","type":"exact"},{"name":"sensitive to bafilomycin A","type":"related"},{"name":"sensitive to bafilomycin A1 during mitotic cell cycle","type":"related"},{"name":"sensitive to bafilomycin A1 during vegetative growth","type":"exact"}],"termid":"FYPO:0000756"}


id: GO:1904174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone demethylase activity (H3-K4 specific).","definition_xrefs":["GOC:dph","GOC:TermGenie","GO_REF:0000059","PMID:24843136"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone demethylase activity (H3-K4 specific) (obsolete GO:1904174)","synonyms":[{"name":"down regulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"down-regulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"downregulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"inhibition of histone demethylase activity (H3-K4 specific)","type":"narrow"}],"termid":"GO:1904174"}


id: PBO:0036052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036052"}


id: MONDO:0007846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"KBG syndrome is a rare condition characterized by a typical facial dysmorphism, macrodontia of the upper central incisors, skeletal (mainly costovertebral) anomalies and developmental delay.","definition_xrefs":["Orphanet:2332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"KBG syndrome","secondary_identifiers":["MEDGEN:66317","UMLS:C0220687","NORD:1322","GARD:82","SCTID:711156009","ICD9:759.89","icd11.foundation:465550090","DOID:14780","MESH:C537015","OMIM:148050"],"synonyms":[{"name":"KBG syndrome","type":"exact"},{"name":"KBGS","type":"related"},{"name":"macrodontia, intellectual disability, characteristic facies, short stature, and skeletal anomalies","type":"related"},{"name":"macrodontia, mental retardation, characteristic facies, short stature, and skeletal anomalies","type":"related"},{"name":"short stature, characteristic facies, macrodontia, intellectual disability, and skeletal anomalies","type":"related"},{"name":"short stature, characteristic facies, macrodontia, mental retardation, and skeletal anomalies","type":"related"},{"name":"short stature-facial and skeletal anomalies-intellectual disability-macrodontia syndrome","type":"exact"}],"termid":"MONDO:0007846","xrefs":{"Monarch":{"xref_id":"0007846"}}}


id: RO:0002519
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has end sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"is_subsequence_of","termid":"RO:0002525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_end_sequence_of","termid":"RO:0002519"}


id: PBO:0002975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human WW domain binding protein-2 ortholog","termid":"PBO:0002975"}


id: PBO:0076507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 7","termid":"PBO:0076507"}


id: GO:0071751
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A polymeric IgA immunoglobulin complex that is complexed with one chain of secretory component (SC). Polymeric IgA is present in mucosal areas, having been transported via a transcytosis mechanism in mucosal epithelial cells relying on the polymeric Ig receptor, a portion of which then remains bound to the polymeric IgA as secretory component.","definition_xrefs":["ISBN:0781765196","GOC:add","PMID:16362985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymeric IgA immunoglobulin complex","termid":"GO:0071749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"secretory IgA immunoglobulin complex","synonyms":[{"name":"sIgA antibody","type":"exact"},{"name":"sIgA1 antibody","type":"narrow"},{"name":"secretory IgA antibody","type":"exact"}],"termid":"GO:0071751"}


id: PBO:0088947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Tyr-tRNA deacylase Dtd1","termid":"PBO:0088947"}


id: GO:0010127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions using mycothiol to convert an alkylating agent to an S-conjugate of mycothiol. The latter is cleaved to release mercapturic acid which is excreted from the cell.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"mycothiol-dependent detoxification","synonyms":[{"name":"mycothiol-dependent detoxification of alkylating agent","type":"narrow"}],"termid":"GO:0010127"}


id: PBO:0056819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 12","termid":"PBO:0056819"}


id: GO:0031616
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A centrosome from which one pole of a mitotic or meiotic spindle is organized.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centrosome","termid":"GO:0005813"},{"relation_name":"part_of","term_name":"spindle pole","termid":"GO:0000922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"spindle pole centrosome","termid":"GO:0031616"}


id: GO:0005731
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of a chromosome where nucleoli form during interphase, and where genes encoding the largest rRNA precursor transcript are tandemly arrayed.","definition_xrefs":["PMID:14504406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleolar chromatin","termid":"GO:0030874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005730","GO:0005634","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"nucleolus organizer region","secondary_identifiers":["Wikipedia:Nucleolus_organizer_region"],"synonyms":[{"name":"NOR","type":"exact"},{"name":"nucleolus organiser region","type":"exact"},{"name":"nucleolus organizer complex","type":"related"}],"termid":"GO:0005731"}


id: PBO:0017456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inheres_in_part_of","termid":"PBO:0017456"}


id: PBO:0066402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regenerating family member 4","termid":"PBO:0066402"}


id: GO:0035761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the dorsal motor nucleus of the vagus nerve to attain its fully functional state.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve development","termid":"GO:0021744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal motor nucleus of vagus nerve maturation","termid":"GO:0035761"}


id: PBO:0052502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 14","termid":"PBO:0052502"}


id: PBO:0034642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_arsenite_ion","termid":"PBO:0034642"}


id: PBO:0068884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 125, pseudogene","termid":"PBO:0068884"}


id: FYPO:0000837
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119847],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in any part of interphase. Includes normal and abnormal occurrences of arrest.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle arrest phenotype","termid":"FYPO:0004040"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"cell cycle arrest in mitotic interphase","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle arrest in interphase during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest in mitotic interphase during vegetative growth","type":"exact"},{"name":"interphase block","type":"related"},{"name":"mitotic cell cycle arrest in interphase","type":"exact"},{"name":"mitotic interphase cell cycle arrest","type":"exact"}],"termid":"FYPO:0000837","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: MOD:01602
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue, and an L-methionine residue to S-(L-lysyl)-L-methionine sulfilimine.","definition_xrefs":["RESID:AA0501","PubMed:12011424","PubMed:19729652","PubMed:15951440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"},{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(L-lysyl)-L-methionine sulfilimine","synonyms":[{"name":"(2S)-2-amino-6-([(E)-[(3S)-3-amino-3-carboxypropyl](methyl)-lambda(4)-sulfanylidene]amino)hexanoic acid","type":"exact"},{"name":"(E)-N6-([(3S)-3-amino-3-carboxypropyl](methyl)-lambda(4)-sulfanylidene)-L-lysine","type":"exact"},{"name":"S-(L-lysyl)-L-methionine sulfilimine","type":"exact"},{"name":"S-lysyl-methionine","type":"exact"}],"termid":"MOD:01602"}


id: PBO:0003245
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active site residues absent","termid":"PBO:0003245"}


id: MONDO:0012854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of bilateral microtia with severe to profound hearing impairment, and cleft palate.","definition_xrefs":["Orphanet:140963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral microtia-deafness-cleft palate syndrome","secondary_identifiers":["MESH:C567359","OMIM:612290","MEDGEN:382936","UMLS:C2676772","GARD:16966"],"synonyms":[{"name":"microtia with or without hearing impairment","type":"related"},{"name":"microtia with or without hearing impairment (AD)","type":"exact"},{"name":"microtia, hearing impairment, and cleft palate","type":"related"},{"name":"microtia, hearing impairment, and cleft palate (AR)","type":"exact"}],"termid":"MONDO:0012854","xrefs":{"Monarch":{"xref_id":"0012854"}}}


id: PBO:0086808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YER138W-A has a paralog, YBL107W-A, that arose from a single-locus duplication","termid":"PBO:0086808"}


id: PBO:0047731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1 like","termid":"PBO:0047731"}


id: GO:0033275
data:
  {"annotated_genes":["SJAG_00750"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117942],"is_not":false,"summary":null,"term":"GO:0033275"}]},"cv_name":"biological_process","definition":"The sliding movement of actin thin filaments and myosin thick filaments past each other.","definition_xrefs":["GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00750":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin-myosin filament sliding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament sliding","type":"related"}],"termid":"GO:0033275","terms_by_termid":{"GO:0033275":null}}


id: PBO:0073318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 1","termid":"PBO:0073318"}


id: PBO:0031841
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_endoplasmic_reticulum_morphology","termid":"PBO:0031841"}


id: GO:0043865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of methionine from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transmembrane transporter activity","termid":"GO:0000099"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"methionine transmembrane transporter activity","secondary_identifiers":["GO:1990240"],"synonyms":[{"name":"methionine importer","type":"related"},{"name":"methionine importer activity","type":"narrow"},{"name":"methionine importing activity","type":"narrow"},{"name":"methionine-importing activity","type":"narrow"}],"termid":"GO:0043865"}


id: MONDO:0007802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypospadias","termid":"MONDO:0005345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypospadias 3, autosomal","secondary_identifiers":["OMIM:146450","GARD:18184","MESH:C567191","MEDGEN:382538","UMLS:C2675154"],"synonyms":[{"name":"HYSP3","type":"related"},{"name":"hypospadias 3, autosomal","type":"exact"},{"name":"hypospadias 3, autosomal, multifactorial","type":"exact"}],"termid":"MONDO:0007802","xrefs":{"Monarch":{"xref_id":"0007802"}}}


id: PBO:0003406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein Ecl2","termid":"PBO:0003406"}


id: GO:0120254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an olefinic compound, any compound which contains a carbon-carbon double bond (aka C=C).","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olefinic compound metabolic process","synonyms":[{"name":"alkene substituted compound metabolic process","type":"exact"},{"name":"alkene substituted compound metabolism","type":"exact"}],"termid":"GO:0120254"}


id: MONDO:0043424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral, bacterial, fungal, or parasitic infectious process that affects the digestive system.","definition_xrefs":["NCIT:C35503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"digestive system infectious disorder","secondary_identifiers":["SCTID:715852004"],"synonyms":[{"name":"digestive system infection","type":"exact"},{"name":"gastrointestinal infection","type":"exact"},{"name":"gastrointestinal system infection","type":"exact"},{"name":"infection of gastrointestinal tract","type":"related"}],"termid":"MONDO:0043424","xrefs":{"Monarch":{"xref_id":"0043424"}}}


id: MONDO:0021474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the ear.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"ear neoplasm","termid":"MONDO:0021233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of ear","secondary_identifiers":["MEDGEN:138081","NCIT:C8417","UMLS:C0347354","SCTID:255181009"],"synonyms":[{"name":"aural neoplasms, benign","type":"exact"},{"name":"benign Ear neoplasm","type":"exact"},{"name":"benign Ear tumor","type":"exact"},{"name":"benign Ear tumour","type":"exact"},{"name":"benign neoplasm of the Ear","type":"exact"},{"name":"benign tumor of Ear","type":"exact"},{"name":"benign tumor of the Ear","type":"exact"},{"name":"benign tumour of Ear","type":"exact"},{"name":"benign tumour of the Ear","type":"exact"},{"name":"ear benign neoplasm","type":"exact"}],"termid":"MONDO:0021474","xrefs":{"Monarch":{"xref_id":"0021474"}}}


id: PBO:0000705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase Cid13","termid":"PBO:0000705"}


id: GO:0034823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citronellate + CoASH + ATP = citronellyl-CoA + AMP + PPi.","definition_xrefs":["UM-BBD_reactionID:r1157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"citronellyl-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R08088"],"termid":"GO:0034823"}


id: PBO:0088187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger protein containing five transmembrane domains; null mutant exhibits strongly fragmented vacuoles and sensitivity to brefeldin A, a drug which is known to affect intracellular transport","termid":"PBO:0088187"}


id: MONDO:0016656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 7","termid":"MONDO:0016906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7q31 microdeletion syndrome","secondary_identifiers":["UMLS:C4750783","Orphanet:251061","MEDGEN:1664416","GARD:20692"],"synonyms":[{"name":"Del(7)(q31)","type":"exact"},{"name":"monosomy 7q31","type":"exact"}],"termid":"MONDO:0016656","xrefs":{"Monarch":{"xref_id":"0016656"}}}


id: PBO:0045301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 3","termid":"PBO:0045301"}


id: GO:0072721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dithiothreitol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to dithiothreitol","termid":"GO:0072720"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dithiothreitol","synonyms":[{"name":"cellular response to 1,4-dithiothreitol","type":"exact"},{"name":"cellular response to DTT","type":"exact"}],"termid":"GO:0072721"}


id: PBO:0083759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential helicase component of heterohexameric MCM2-7 complexes; MCM2-7 complexes bind pre-replication complexes on DNA and melt DNA prior to replication; forms an Mcm4p-6p-7p subcomplex; shows nuclear accumulation in G1; homolog of S. pombe Cdc21p","termid":"PBO:0083759"}


id: GO:0003147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The characteristic movement of a cell from the dorsal ridge of the neural tube towards the heart and that contributes to heart formation.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell migration","termid":"GO:0001755"},{"relation_name":"is_a","term_name":"cell migration involved in heart formation","termid":"GO:0060974"},{"relation_name":"part_of","term_name":"cardiac neural crest cell development involved in heart development","termid":"GO:0061308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell migration involved in heart formation","termid":"GO:0003147"}


id: PBO:0028845
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_Mmi1_focus","termid":"PBO:0028845"}


id: PBO:0043404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 1","termid":"PBO:0043404"}


id: MONDO:1011665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal furunculosis, non-human animal","secondary_identifiers":["OMIA:001589"],"termid":"MONDO:1011665","xrefs":{"Monarch":{"xref_id":"1011665"}}}


id: PBO:0045862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1A lysine methyltransferase 1","termid":"PBO:0045862"}


id: GO:0047255
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: galactogen + UDP-galactose = 1,6-beta-D-galctosylgalactogen + UDP.","definition_xrefs":["EC:2.4.1.205","MetaCyc:2.4.1.205-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"galactogen 6-beta-galactosyltransferase activity","synonyms":[{"name":"1,6-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:galactogen beta-1,6-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:galactogen beta-1,6-D-galactosyltransferase activity","type":"related"},{"name":"beta-(1,6)-D-galactosyltransferase activity","type":"related"},{"name":"galactogen 6beta-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-galactogen galactosyltransferase activity","type":"related"}],"termid":"GO:0047255"}


id: GO:0031423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a hexon, the major protein component of the icosahedral capsid of an adenovirus.","definition_xrefs":["GOC:mah","PMID:12915569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hexon binding","termid":"GO:0031423"}


id: MONDO:0016837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"16p13.11 microduplication syndrome is a recently described syndrome associated with variable clinical features including behavioral abnormalities, developmental delay, congenital heart defects and skeletal anomalies.","definition_xrefs":["Orphanet:261243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 16","termid":"MONDO:0016949"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"16p13.11 microduplication syndrome","secondary_identifiers":["MEDGEN:930264","DECIPHER:80","UMLS:C4304595","GARD:20775","SCTID:719578005"],"synonyms":[{"name":"16p13.11 recurrent microduplication (neurocognitive disorder susceptibility locus)","type":"exact"},{"name":"dup(16)(p13.11)","type":"exact"},{"name":"trisomy 16p13.11","type":"exact"}],"termid":"MONDO:0016837","xrefs":{"Monarch":{"xref_id":"0016837"}}}


id: PBO:0051027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 7","termid":"PBO:0051027"}


id: MONDO:0800483
data:
  {"annotated_genes":["SJAG_00504"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007943"}]},"cv_name":"mondo","definition":"A congenital malformation syndrome characterized by mandibulofacial dysostosis and anterior upper-limb defects, though occasionally, lower-limb defects have also been reported. Intrafamilial variability has been observed along with phenotype variability and severity including shoulder and pelvic girdle hypoplasia, fibular hypoplasia and eleven ribs.","direct_ancestors":[{"relation_name":"is_a","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00504":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"SF3B4-related acrofacial dysostosis","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"SF3B4-related acrofacial dysostosis","type":"exact"}],"termid":"MONDO:0800483","terms_by_termid":{"MONDO:0007943":null},"xrefs":{"Monarch":{"xref_id":"0800483"}}}


id: PBO:0086454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein; member of the fungal lipid-translocating exporter (LTE) family of proteins; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; YLR046C has a paralog, RTA1, that arose from the whole genome duplication","termid":"PBO:0086454"}


id: PBO:0044730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 12, pseudogene","termid":"PBO:0044730"}


id: PBO:0052005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"joining chain of multimeric IgA and IgM pseudogene 1","termid":"PBO:0052005"}


id: PBO:0047783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXD3 antisense RNA 1","termid":"PBO:0047783"}


id: PBO:0028836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_homologous_chromosome_pairing_at_cis-acting_homologous_chromosome_pairing_region","termid":"PBO:0028836"}


id: MONDO:0002723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cutaneous mastocytosis (obsolete MONDO:0002723)","synonyms":[{"name":"obsolete cutaneous mastocytosis (disease)","type":"exact"}],"termid":"MONDO:0002723","xrefs":{"Monarch":{"xref_id":"0002723"}}}


id: MONDO:0700336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cancer in which a carcinoma, usually of the digestive tract or female reproductive organs, has spread extensively throughout the peritoneum and causes tumors to grow on the peritoneum. Peritoneal carcinomatosis can happen in many types of cancer, but it is most common in people with cancers of the ovary, colon, rectum, stomach, pancreas, or appendix.","definition_xrefs":["PMID:24222942","NCIT:C27382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneum cancer","termid":"MONDO:0002087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peritoneal carcinomatosis","synonyms":[{"name":"abdominal carcinomatosis","type":"exact"},{"name":"carcinomatosis of the peritoneum","type":"exact"},{"name":"peritoneal carcinomatosis","type":"exact"}],"termid":"MONDO:0700336","xrefs":{"Monarch":{"xref_id":"0700336"}}}


id: MONDO:0014366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the ZMYND15 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 14","secondary_identifiers":["OMIM:615842","GARD:16020","UMLS:C4014454","MEDGEN:862891","DOID:0070179"],"synonyms":[{"name":"SPGF14","type":"related"},{"name":"ZMYND15 azoospermia","type":"exact"},{"name":"azoospermia caused by mutation in ZMYND15","type":"exact"},{"name":"spermatogenic failure 14","type":"exact"},{"name":"spermatogenic failure type 14","type":"exact"}],"termid":"MONDO:0014366","xrefs":{"Monarch":{"xref_id":"0014366"}}}


id: MONDO:0010888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The growth of endometrial tissue inside the muscular wall of the uterine corpus. Clinical manifestations include pain, dysmenorrhea, and menorrhagia.","definition_xrefs":["NCIT:C6996"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"endometriosis","termid":"MONDO:0005133"},{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenomyosis","secondary_identifiers":["MESH:D062788","OMIM:600458","UMLS:C5574708","DOID:288","icd11.foundation:171294592","ICD9:617.0","MEDGEN:1805484","ICD10CM:N80.0","SCTID:237115002"],"synonyms":[{"name":"adenomyosis of the uterus","type":"exact"},{"name":"adenomyosis of uterus","type":"exact"},{"name":"endometriosis (disease) of myometrium","type":"exact"},{"name":"endometriosis interna","type":"exact"},{"name":"endometriosis of myometrium","type":"exact"},{"name":"endometriosis of uterus","type":"exact"},{"name":"endometriosis, myometrium","type":"exact"},{"name":"myometrium endometriosis (disease)","type":"exact"},{"name":"uterine adenomyosis","type":"exact"},{"name":"uterine corpus adenomyosis","type":"exact"},{"name":"uterus corpus adenomyosis","type":"exact"}],"termid":"MONDO:0010888","xrefs":{"Monarch":{"xref_id":"0010888"}}}


id: PBO:0013760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic glutamate-tRNA ligase gus1 (predicted)","termid":"PBO:0013760"}


id: GO:0032407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MutSalpha mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex binding","termid":"GO:0032404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MutSalpha complex binding","termid":"GO:0032407"}


id: GO:0018241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of protein via the O5 atom of peptidyl-hydroxylysine, forming O5-glycosyl-L-hydroxylysine; the most common form is galactosyl hydroxylysine.","definition_xrefs":["RESID:AA0153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein O-linked glycosylation via hydroxylysine","synonyms":[{"name":"protein amino acid O-linked glycosylation via hydroxylysine","type":"exact"}],"termid":"GO:0018241"}


id: GO:0106099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 2-dehydro-3-deoxy-L-rhamnonate = pyruvate + (S)-lactaldehyde.","definition_xrefs":["GOC:imk","EC:4.1.2.53","PMID:18754683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-keto-3-deoxy-L-rhamnonate aldolase activity","secondary_identifiers":["RHEA:25784"],"termid":"GO:0106099"}


id: MONDO:0012884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 13","secondary_identifiers":["OMIM:612378","MEDGEN:382864","UMLS:C2676487"],"synonyms":[{"name":"SLEB13","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 13","type":"exact"}],"termid":"MONDO:0012884","xrefs":{"Monarch":{"xref_id":"0012884"}}}


id: PBO:0027378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_fragmented_nuclear_envelope_during_mitotic_telophase","termid":"PBO:0027378"}


id: GO:0034721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of a methyl group from a trimetylated lysine at position 4 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 demethylation, trimethyl-H3-K4-specific (obsolete GO:0034721)","synonyms":[{"name":"H3K4 demethylation (me3)","type":"exact"},{"name":"histone H3-K4 tridemethylation","type":"related"}],"termid":"GO:0034721"}


id: MONDO:0001698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatophytosis that involves the deep dermal layers.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"tinea corporis","termid":"MONDO:0001461"},{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tinea profunda","secondary_identifiers":["DOID:13368","MEDGEN:702632","SCTID:214600002","UMLS:C1279621"],"synonyms":[{"name":"Majocchi's granuloma","type":"related"},{"name":"deep seated dermatophytosis","type":"related"},{"name":"granuloma trichophyticum","type":"exact"}],"termid":"MONDO:0001698","xrefs":{"Monarch":{"xref_id":"0001698"}}}


id: FYPO:0002258
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more, but smaller, vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small vacuoles","termid":"FYPO:0002787"},{"relation_name":"is_a","term_name":"vacuoles present in increased numbers","termid":"FYPO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles present in increased numbers","synonyms":[{"name":"fragmented vacuoles","type":"related"},{"name":"small vacuoles present in greater numbers","type":"exact"},{"name":"vacuole organization defects, fragmented vacuoles","type":"related"},{"name":"vacuoles present in increased numbers, with decreased vacuole size","type":"exact"}],"termid":"FYPO:0002258"}


id: PBO:0053287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing 1","termid":"PBO:0053287"}


id: PBO:0089011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear export signal receptor Crm1","termid":"PBO:0089011"}


id: PBO:0034437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_diglyceride_level","termid":"PBO:0034437"}


id: GO:0018259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a covalent cross-link between RNA and a peptidyl-serine residue by the formation of O-(phospho-5'-5NA)-L-serine.","definition_xrefs":["RESID:AA0213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-protein covalent cross-linking","termid":"GO:0018144"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA-protein covalent cross-linking via peptidyl-serine","termid":"GO:0018259"}


id: GO:0043513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Heterodimeric hormone composed of an inhibin alpha subunit complexed with an inhibin beta-B subunit.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibin complex","termid":"GO:0043511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"inhibin B complex","termid":"GO:0043513"}


id: GO:0042575
data:
  {"annotated_genes":["SJAG_04879","SJAG_05239","SJAG_02658","SJAG_02627","SJAG_01823","SJAG_05197","SJAG_04877","SJAG_02818","SJAG_04994","SJAG_00611","SJAG_02172","SJAG_00153","SJAG_02908","SJAG_00814","SJAG_02667"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73205,70764,75648,75355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005658"},{"annotations":[75380,77247,71378,103137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043625"},{"annotations":[115706,107653,113868,110244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008622"},{"annotations":[63124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005760"},{"annotations":[103190,78061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016035"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses DNA polymerase activity and is involved in template directed synthesis of DNA.","definition_xrefs":["PMID:12045093","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_00814":null,"SJAG_01823":null,"SJAG_02172":null,"SJAG_02627":null,"SJAG_02658":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_04994":null,"SJAG_05197":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA polymerase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0042575","terms_by_termid":{"GO:0005658":null,"GO:0005760":null,"GO:0008622":null,"GO:0016035":null,"GO:0043625":null}}


id: MONDO:0021260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the sensory ganglion.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory ganglionopathy","synonyms":[{"name":"disease of sensory ganglion","type":"exact"},{"name":"disease or disorder of sensory ganglion","type":"exact"},{"name":"disorder of sensory ganglion","type":"exact"},{"name":"sensory ganglion disease","type":"exact"},{"name":"sensory ganglion disease or disorder","type":"exact"}],"termid":"MONDO:0021260","xrefs":{"Monarch":{"xref_id":"0021260"}}}


id: PBO:0117131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNB2 antisense RNA 1","termid":"PBO:0117131"}


id: MONDO:0011945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal Gaucher disease is the perinatal lethal form of Gaucher disease (GD).","definition_xrefs":["Orphanet:85212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Gaucher disease","termid":"MONDO:0018150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0005328","MONDO:0002525"],"is_obsolete":false,"name":"Gaucher disease perinatal lethal","secondary_identifiers":["UMLS:C1842704","DOID:0110960","MESH:C564306","OMIM:608013","GARD:10675","MEDGEN:374996","SCTID:870313002"],"synonyms":[{"name":"Gaucher disease collodion type","type":"exact"},{"name":"Gaucher disease perinatal lethal","type":"exact"},{"name":"Gaucher disease, collodion type","type":"exact"},{"name":"Gaucher disease, perinatal lethal","type":"exact"},{"name":"Gaucher disease, perinatal-lethal form","type":"exact"},{"name":"Gaucher's disease perinatal lethal","type":"exact"},{"name":"fetal Gaucher disease","type":"exact"},{"name":"foetal Gaucher disease","type":"exact"},{"name":"perinatal lethal Gaucher disease","type":"exact"}],"termid":"MONDO:0011945","xrefs":{"Monarch":{"xref_id":"0011945"}}}


id: GO:0090430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: caffeoyl-CoA + a saturated primary alcohol = an alkyl caffeate + CoA.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"caffeoyl-CoA: alcohol caffeoyl transferase activity","termid":"GO:0090430"}


id: GO:0019326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrotoluene, any methylbenzene molecule with NO2 group(s) attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrotoluene metabolic process","synonyms":[{"name":"nitrotoluene metabolism","type":"exact"}],"termid":"GO:0019326"}


id: PBO:0028208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_punctate_cytoplasmic_protein_localization","termid":"PBO:0028208"}


id: PR:Q9US35
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1039.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.06","synonyms":[{"name":"D-serine deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DSD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC1039.06","type":"exact"}],"termid":"PR:Q9US35"}


id: GO:0006741
data:
  {"annotated_genes":["SJAG_01582","SJAG_01566","SJAG_03946"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71445,78296,80207],"is_not":false,"summary":null,"term":"GO:0006741"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide phosphate (NADP+), a coenzyme that interconverts with its reduced form, NADPH, in many redox and biosynthetic reactions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"NADP metabolic process","termid":"GO:0006739"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide biosynthetic process","termid":"GO:0019359"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01566":null,"SJAG_01582":null,"SJAG_03946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"NADP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"NADP (oxidized) biosynthesis","type":"exact"},{"name":"NADP (oxidized) biosynthetic process","type":"exact"},{"name":"NADP (reduced) biosynthesis","type":"exact"},{"name":"NADP (reduced) biosynthetic process","type":"exact"},{"name":"NADP anabolism","type":"exact"},{"name":"NADP biosynthesis","type":"exact"},{"name":"NADP formation","type":"exact"},{"name":"NADP synthesis","type":"exact"},{"name":"NADPH biosynthesis","type":"exact"},{"name":"NADPH biosynthetic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate biosynthesis","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate biosynthetic process","type":"exact"},{"name":"oxidized NADP biosynthesis","type":"exact"},{"name":"oxidized NADP biosynthetic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate biosynthesis","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate biosynthetic process","type":"exact"},{"name":"reduced NADP biosynthesis","type":"exact"},{"name":"reduced NADP biosynthetic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate biosynthesis","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate biosynthetic process","type":"exact"}],"termid":"GO:0006741","terms_by_termid":{"GO:0006741":null}}


id: PBO:0081580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 507","termid":"PBO:0081580"}


id: PBO:0001520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap14","termid":"PBO:0001520"}


id: GO:0015780
data:
  {"annotated_genes":["SJAG_04162","SJAG_04406","SJAG_04697","SJAG_01177","SJAG_00434","SJAG_00339","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[72147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990570"},{"annotations":[75351,88709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"},{"annotations":[76348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072334"},{"annotations":[75478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015786"},{"annotations":[112681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"},{"annotations":[77960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990569"},{"annotations":[66569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of nucleotide-sugars into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00339":null,"SJAG_00434":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_04162":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"nucleotide-sugar transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleotide-sugar transport","type":"related"}],"termid":"GO:0015780","terms_by_termid":{"GO:0015786":null,"GO:0015790":null,"GO:0036085":null,"GO:0072334":null,"GO:0097624":null,"GO:0120112":null,"GO:1990569":null,"GO:1990570":null}}


id: GO:0072765
data:
  {"annotated_genes":["SJAG_02761","SJAG_01805","SJAG_04076","SJAG_00794","SJAG_02737","SJAG_03540","SJAG_01613","SJAG_02624","SJAG_05196","SJAG_00727","SJAG_01745","SJAG_03683","SJAG_02299","SJAG_02814","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098653"},{"annotations":[103131,91682,110270,117242,89933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072766"},{"annotations":[95647,102750,118449,100701,118963,116226,109450,94138,99545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"}]},"cv_name":"biological_process","definition":"A cellular localization process in which a centromere/kinetochore is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_00794":null,"SJAG_01613":null,"SJAG_01745":null,"SJAG_01805":null,"SJAG_02299":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03126":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"centromere localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of kinetochore localization","type":"exact"},{"name":"kinetochore localisation","type":"exact"},{"name":"kinetochore localization","type":"exact"}],"termid":"GO:0072765","terms_by_termid":{"GO:0072766":null,"GO:0098653":null,"GO:1990571":null}}


id: PBO:0076436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 12","termid":"PBO:0076436"}


id: GO:0008191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase inhibitor activity","termid":"GO:0004866"},{"relation_name":"negatively_regulates","term_name":"metalloendopeptidase activity","termid":"GO:0004222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"negatively_regulates","termid":"GO:0003824"},{"rel_name":"negatively_regulates","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"negatively_regulates","termid":"GO:0016787"},{"rel_name":"regulates","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"negatively_regulates","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0140096","GO:0098772","GO:0003674","GO:0016787","GO:0003824","GO:0140678","GO:0008233","GO:0030234","GO:0004857"],"is_obsolete":false,"name":"metalloendopeptidase inhibitor activity","synonyms":[{"name":"metalloprotease inhibitor","type":"narrow"},{"name":"metalloproteinase inhibitor","type":"narrow"}],"termid":"GO:0008191"}


id: PBO:0054149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1516","termid":"PBO:0054149"}


id: PBO:0040285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit beta 1","termid":"PBO:0040285"}


id: GO:0070192
data:
  {"annotated_genes":["SJAG_02606","SJAG_02286","SJAG_03287","SJAG_03683","SJAG_05226","SJAG_03685","SJAG_00756","SJAG_03698","SJAG_04143","SJAG_01777","SJAG_04950","SJAG_02761","SJAG_02814","SJAG_03161","SJAG_04508","SJAG_01538","SJAG_03540","SJAG_00207","SJAG_03092","SJAG_03926","SJAG_02624","SJAG_00646","SJAG_03680","SJAG_00727","SJAG_01613","SJAG_01805","SJAG_01263","SJAG_05196","SJAG_04076","SJAG_03048","SJAG_00678","SJAG_03989","SJAG_00794","SJAG_05260"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88210,94171],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[110860,88099,79261,108130,111533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007129"},{"annotations":[117362,89934],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030999"},{"annotations":[64705,90104],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[90105,105424,103132,87742,100245],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[118963,99545,95647,100701,116226,102750,109450,94138,118449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"},{"annotations":[72136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010032"},{"annotations":[88346,113535,111993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045144"},{"annotations":[117862,97047,117998,116246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045141"},{"annotations":[114293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"},{"annotations":[102706],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0062123"}]},"cv_name":"biological_process","definition":"A process of chromosome organization that is involved in a meiotic cell cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null,"SJAG_00678":null,"SJAG_00727":null,"SJAG_00756":null,"SJAG_00794":null,"SJAG_01263":null,"SJAG_01538":null,"SJAG_01613":null,"SJAG_01777":null,"SJAG_01805":null,"SJAG_02286":null,"SJAG_02606":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03092":null,"SJAG_03161":null,"SJAG_03287":null,"SJAG_03540":null,"SJAG_03680":null,"SJAG_03683":null,"SJAG_03685":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04143":null,"SJAG_04508":null,"SJAG_04950":null,"SJAG_05196":null,"SJAG_05226":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"chromosome organization involved in meiotic cell cycle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"chromosome organisation involved in meiosis","type":"exact"},{"name":"meiotic chromosome organization","type":"exact"}],"termid":"GO:0070192","terms_by_termid":{"GO:0007129":null,"GO:0010032":null,"GO:0030999":null,"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0045144":null,"GO:0051456":null,"GO:0062123":null,"GO:0070197":null,"GO:1990571":null}}


id: MONDO:0600024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of myositis that is caused by an inherited genomic modification in an individual, and has an unknown cause.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic inflammatory myopathy","termid":"MONDO:0600023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"familial idiopathic inflammatory myopathy","secondary_identifiers":["UMLS:C3888318","MESH:C000598744","MEDGEN:854861","OMIM:160750"],"synonyms":[{"name":"familial idiopathic myositis","type":"exact"}],"termid":"MONDO:0600024","xrefs":{"Monarch":{"xref_id":"0600024"}}}


id: PBO:0086695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; intron is predicted but not detected experimentally; YLR464W overlaps the verified gene YRF1-4/YLR466W and two dubious ORFs YLR463C and YLR465C","termid":"PBO:0086695"}


id: MONDO:0005185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An older, deprecated term that encompassed three major types of autoimmune or autoinflammatory arthritis in children: systemic-onset, pauciarticular, or polyarticular arthritis. The juvenile rheumatoid arthritis classification system has been replaced by the International League of Associations for Rheumatology (ILAR) juvenile idiopathic arthritis classification system.","definition_xrefs":["NCIT:C27179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatoid arthritis","termid":"MONDO:0008383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"chronic childhood arthritis","secondary_identifiers":["Wikipedia:Juvenile_idiopathic_arthritis","SCTID:410793008"],"synonyms":[{"name":"JRA","type":"exact"},{"name":"Juvenile rheumatoid arthritis","type":"exact"},{"name":"Juvenile rheumatoid arthritis (AQ)","type":"exact"}],"termid":"MONDO:0005185","xrefs":{"Monarch":{"xref_id":"0005185"}}}


id: PBO:0029180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-alpha,alpha-trehalase_activity_increase_abolished_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029180"}


id: PBO:0040645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAZ1A antisense RNA 1","termid":"PBO:0040645"}


id: FYPO:0001947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which progression through the mitotic cell cycle is arrested in anaphase under conditions where arrest does not normally occur, and sister chromatids have not separated. The unseparated chromosomes remain condensed.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal cell cycle arrest in mitotic anaphase, with unseparated sister chromatids (obsolete FYPO:0001947)","synonyms":[{"name":"abnormal cell cycle arrest in mitotic anaphase, with unseparated sister chromatids, during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic anaphase, with unseparated, condensed chromosomes","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic anaphase, with unseparated, condensed sister chromatids","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in anaphase, with unseparated sister chromatids","type":"exact"},{"name":"absence of chromosome separation, abnormal mitotic anaphase arrest with condensed chromosomes","type":"exact"}],"termid":"FYPO:0001947"}


id: GO:0070763
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of homodimer of the Notch ligand Delta1.","definition_xrefs":["PMID:12794186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Delta1 complex","synonyms":[{"name":"Delta1 homodimer complex","type":"exact"}],"termid":"GO:0070763"}


id: PBO:0074931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 98","termid":"PBO:0074931"}


id: PBO:0091592
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongated at Low PH","termid":"PBO:0091592"}


id: PBO:0038481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 6 (Langereis blood group)","termid":"PBO:0038481"}


id: PBO:0076105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 10","termid":"PBO:0076105"}


id: PBO:0050117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 27","termid":"PBO:0050117"}


id: MOD:00528
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a carbohydrate-like group composed of Hex1HexNAc1NeuAc2 linked through a glycosidic bond.","definition_xrefs":["Unimod:160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc2 glycosylated residue","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(2)","type":"related"},{"name":"Hex1HexNAc1NeuAc2","type":"related"}],"termid":"MOD:00528"}


id: GO:0140380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of psilocybin, a psychotropic tryptamine-derived natural product.","definition_xrefs":["PMID:28763571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0019748"],"is_obsolete":false,"name":"psilocybin biosynthetic process","termid":"GO:0140380"}


id: PBO:0081870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 812, pseudogene","termid":"PBO:0081870"}


id: PBO:0077705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin I2, fast skeletal type","termid":"PBO:0077705"}


id: PBO:0088105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uridine nucleosidase (uridine-cytidine N-ribohydrolase); cleaves N-glycosidic bonds in nucleosides; involved in the pyrimidine salvage and nicotinamide riboside salvage pathways","termid":"PBO:0088105"}


id: MONDO:0019711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis with predominant vertebral and costal involvement (obsolete MONDO:0019711)","secondary_identifiers":["Orphanet:93454","icd11.foundation:395969787"],"termid":"MONDO:0019711","xrefs":{"Monarch":{"xref_id":"0019711"}}}


id: PBO:0087612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; condensin reorganizes chromosomes during both mitosis and meiosis; essential SMC chromosomal ATPase family member that forms a subcomplex with Smc2p that has ATP-hydrolyzing and DNA-binding activity, but other condensin subunits are required for chromatin binding; required for clustering of tRNA genes at the nucleolus","termid":"PBO:0087612"}


id: PBO:0053506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 489","termid":"PBO:0053506"}


id: GO:0018379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The linkage of cytochromes and other heme proteins to heme via heme-bis-L-cysteine.","definition_xrefs":["RESID:AA0134"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c-heme linkage via heme-bis-L-cysteine (obsolete GO:0018379)","synonyms":[{"name":"cytochrome c-haem linkage via haem-bis-L-cysteine","type":"exact"}],"termid":"GO:0018379"}


id: PBO:0086753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; present in a region duplicated between chromosomes XIV and III; YCL001W-B has a paralog, DOM34, that arose from the whole genome duplication","termid":"PBO:0086753"}


id: PBO:0088060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase (E3); controls septin dynamics, spindle position checkpoint (SPOC) with ligase Dma2p by regulating recruitment of Elm1p to bud neck; regulates levels of eIF2 subunit Gcd11p, as well as abundance, localization, and ubiquitination of Cdk inhibitory kinase Swe1p; ubiquitinates cyclin Pcl1p; ortholog of human RNF8, similar to human Chfr; contains FHA, RING fingers; DMA1 has a paralog, DMA2, that arose from the whole genome duplication","termid":"PBO:0088060"}


id: PBO:0043941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod homeobox","termid":"PBO:0043941"}


id: GO:0021830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of interneurons from the subpallium to the cortex during forebrain development.","definition_xrefs":["PMID:12626695","GOC:dph","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-independent telencephalic tangential interneuron migration","termid":"GO:0021843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"interneuron migration from the subpallium to the cortex","termid":"GO:0021830"}


id: GO:0070407
data:
  {"annotated_genes":["SJAG_00984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67484],"is_not":false,"summary":null,"term":"GO:0070407"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the oxidation of one or more amino acid residues in the protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein catabolic process","termid":"GO:0019941"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"oxidation-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"oxidation-dependent protein breakdown","type":"exact"},{"name":"oxidation-dependent protein catabolism","type":"exact"},{"name":"oxidation-dependent protein degradation","type":"exact"},{"name":"oxidation-dependent proteolysis","type":"exact"},{"name":"oxidized protein catabolic process","type":"exact"}],"termid":"GO:0070407","terms_by_termid":{"GO:0070407":null}}


id: PBO:0045892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 4","termid":"PBO:0045892"}


id: PBO:0079485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXN2 pseudogene 1","termid":"PBO:0079485"}


id: GO:1900987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of ajmaline.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete ajmaline catabolic process (obsolete GO:1900987)","synonyms":[{"name":"ajmaline breakdown","type":"exact"},{"name":"ajmaline catabolism","type":"exact"},{"name":"ajmaline degradation","type":"exact"}],"termid":"GO:1900987"}


id: GO:1903570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein kinase D signaling.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:20497126","GO_REF:0000058","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein kinase D signaling (obsolete GO:1903570)","synonyms":[{"name":"regulation of PKD signal transduction","type":"exact"},{"name":"regulation of PKD signaling cascade","type":"related"},{"name":"regulation of protein kinase D signal transduction","type":"exact"},{"name":"regulation of protein kinase D signaling cascade","type":"related"},{"name":"regulation of protein kinase D signalling cascade","type":"related"}],"termid":"GO:1903570"}


id: PBO:0079253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC23L antisense RNA 1","termid":"PBO:0079253"}


id: PBO:0056002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 1","termid":"PBO:0056002"}


id: MONDO:0000584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete B cell linker protein deficiency (obsolete MONDO:0000584)","termid":"MONDO:0000584","xrefs":{"Monarch":{"xref_id":"0000584"}}}


id: GO:0060045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation.","definition_xrefs":["GOC:dph","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle tissue growth","termid":"GO:0055023"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell proliferation","termid":"GO:0060043"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell proliferation","termid":"GO:0060038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell proliferation","synonyms":[{"name":"positive regulation of heart muscle cell proliferation","type":"related"}],"termid":"GO:0060045"}


id: MONDO:0033370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 61","secondary_identifiers":["MEDGEN:1639392","OMIM:617933","UMLS:C4693688","DOID:0080434"],"synonyms":[{"name":"DEE61","type":"exact"},{"name":"EIEE61","type":"exact"},{"name":"developmental and epileptic encephalopathy 61","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 61","type":"exact"}],"termid":"MONDO:0033370","xrefs":{"Monarch":{"xref_id":"0033370"}}}


id: GO:1900275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase C activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phospholipase C activity (obsolete GO:1900275)","synonyms":[{"name":"down regulation of lecithinase C activity","type":"related"},{"name":"down regulation of lipophosphodiesterase C","type":"related"},{"name":"down regulation of phosphatidase C","type":"related"},{"name":"down regulation of phospholipase C activity","type":"exact"},{"name":"down-regulation of lecithinase C activity","type":"related"},{"name":"down-regulation of lipophosphodiesterase C","type":"related"},{"name":"down-regulation of phosphatidase C","type":"related"},{"name":"down-regulation of phospholipase C activity","type":"exact"},{"name":"downregulation of lecithinase C activity","type":"related"},{"name":"downregulation of lipophosphodiesterase C","type":"related"},{"name":"downregulation of phosphatidase C","type":"related"},{"name":"downregulation of phospholipase C activity","type":"exact"},{"name":"inhibition of lecithinase C activity","type":"related"},{"name":"inhibition of lipophosphodiesterase C","type":"related"},{"name":"inhibition of phosphatidase C","type":"related"},{"name":"inhibition of phospholipase C activity","type":"narrow"},{"name":"negative regulation of lecithinase C activity","type":"related"},{"name":"negative regulation of lipophosphodiesterase C","type":"related"},{"name":"negative regulation of phosphatidase C","type":"related"}],"termid":"GO:1900275"}


id: MONDO:0008144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete osteochondritis dissecans (obsolete MONDO:0008144)","termid":"MONDO:0008144","xrefs":{"Monarch":{"xref_id":"0008144"}}}


id: GO:1901041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peptide antigen transport.","definition_xrefs":["GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002585"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of peptide antigen transport","termid":"GO:1901039"},{"relation_name":"positively_regulates","term_name":"peptide antigen transport","termid":"GO:0046968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of peptide antigen transport","synonyms":[{"name":"activation of peptide antigen transport","type":"narrow"},{"name":"up regulation of peptide antigen transport","type":"exact"},{"name":"up-regulation of peptide antigen transport","type":"exact"},{"name":"upregulation of peptide antigen transport","type":"exact"}],"termid":"GO:1901041"}


id: MONDO:0030448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 86","secondary_identifiers":["OMIM:619549","UMLS:C5561995","MEDGEN:1794205"],"synonyms":[{"name":"IMD86","type":"exact"}],"termid":"MONDO:0030448","xrefs":{"Monarch":{"xref_id":"0030448"}}}


id: PBO:0049353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 11","termid":"PBO:0049353"}


id: MOD:00539
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod 179 merged wth Unimod 447 remap to ??? modification from Unimod O-linked glycosylation","definition_xrefs":["Unimod:182"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00539 threonine reduced to aminobutynate (obsolete MOD:00539)","termid":"MOD:00539"}


id: PBO:0076009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1","termid":"PBO:0076009"}


id: GO:0072131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a kidney mesenchymal tissue are generated and organized. Kidney mesenchyme is the tissue made up of loosely connected mesenchymal cells in the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme morphogenesis","termid":"GO:0072132"},{"relation_name":"part_of","term_name":"kidney mesenchyme development","termid":"GO:0072074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney mesenchyme morphogenesis","termid":"GO:0072131"}


id: PBO:0086004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; YOR062C has a paralog, YKR075C, that arose from the whole genome duplication","termid":"PBO:0086004"}


id: GO:0001733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a galactosylceramide = adenosine 3',5'-bisphosphate + a galactosylceramidesulfate.","definition_xrefs":["PMID:10727929","RHEA:20613","EC:2.8.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose 3-O-sulfotransferase activity","termid":"GO:0050694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"galactosylceramide sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-9844587","MetaCyc:GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenosine-5'-phosphosulfate-cerebroside sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:galactosylceramide 3'-sulfotransferase activity","type":"related"},{"name":"GSase","type":"related"},{"name":"cerebroside sulfotransferase activity","type":"exact"},{"name":"galactocerebroside sulfotransferase activity","type":"related"},{"name":"galactolipid sulfotransferase activity","type":"related"},{"name":"galactosylceramide sulphotransferase activity","type":"exact"},{"name":"glycolipid sulfotransferase activity","type":"related"},{"name":"glycosphingolipid sulfotransferase activity","type":"related"}],"termid":"GO:0001733"}


id: PBO:0053688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 881","termid":"PBO:0053688"}


id: MONDO:0020831
data:
  {"annotated_genes":["SJAG_02618"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030077"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02618":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005267"],"is_obsolete":false,"name":"congenital vertebral-cardiac-renal anomalies syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1814457","OMIMPS:617660","GARD:17961","Orphanet:521438","UMLS:C5680183"],"synonyms":[{"name":"VCRL","type":"exact"},{"name":"vertebral, cardiac, renal, and limb defects syndrome","type":"exact"}],"termid":"MONDO:0020831","terms_by_termid":{"MONDO:0030077":null},"xrefs":{"Monarch":{"xref_id":"0020831"}}}


id: MONDO:0010138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypermetabolic syndrome caused by the elevation of thyroid hormone levels in the serum. Signs and symptoms include tachycardia, palpitations, tremor, weight loss, warm weather intolerance, and moist skin. Causes include Graves disease, toxic nodular goiter, toxic thyroid nodule, and lymphocytic thyroiditis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Graves disease","termid":"MONDO:0005364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"thyrotoxicosis","secondary_identifiers":["MEDGEN:11814","EFO:0009190","SCTID:90739004","DOID:7997","UMLS:C0040156","icd11.foundation:1470387017","ICD9:242.80","NCIT:C61469","ICD9:242.90","MESH:D013971","ICD9:242"],"synonyms":[{"name":"GRD","type":"related"},{"name":"GRD1","type":"related"},{"name":"Graves disease, susceptibility to, 1","type":"related"},{"name":"hyperthyroidism, autoimmune","type":"related"}],"termid":"MONDO:0010138","xrefs":{"Monarch":{"xref_id":"0010138"}}}


id: GO:0002093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that alters the size or shape of an auditory receptor cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"},{"relation_name":"part_of","term_name":"inner ear morphogenesis","termid":"GO:0042472"},{"relation_name":"part_of","term_name":"auditory receptor cell development","termid":"GO:0060117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell morphogenesis","synonyms":[{"name":"hair cell morphogenesis","type":"broad"}],"termid":"GO:0002093"}


id: MONDO:0100461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastrointestinal defects and immunodeficiency syndrome (obsolete MONDO:0100461)","termid":"MONDO:0100461","xrefs":{"Monarch":{"xref_id":"0100461"}}}


id: PBO:0046198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A3 family member B, pseudogene","termid":"PBO:0046198"}


id: PBO:0116978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO16 antisense RNA 1","termid":"PBO:0116978"}


id: GO:1903744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterograde synaptic vesicle transport.","definition_xrefs":["GOC:kmv","PMID:25329901","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle transport along microtubule","termid":"GO:1901610"},{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle transport","termid":"GO:1902805"},{"relation_name":"is_a","term_name":"regulation of anterograde synaptic vesicle transport","termid":"GO:1903742"},{"relation_name":"positively_regulates","term_name":"anterograde synaptic vesicle transport","termid":"GO:0048490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of anterograde synaptic vesicle transport","synonyms":[{"name":"activation of anterograde synaptic vesicle transport","type":"narrow"},{"name":"up regulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"up-regulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"upregulation of anterograde synaptic vesicle transport","type":"exact"}],"termid":"GO:1903744"}


id: GO:0003939
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73019],"is_not":false,"summary":null,"term":"GO:0003939"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-iditol + NAD+ = L-sorbose + NADH + H+. Acts on a number of sugar alcohols, including (but not limited to) L-iditol, D-glucitol, D-xylitol, and D-galactitol.","definition_xrefs":["EC:1.1.1.14","PMID:13373783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-iditol 2-dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:L-IDITOL-2-DEHYDROGENASE-RXN","Reactome:R-HSA-5652195"],"synonyms":[{"name":"L-iditol (sorbitol) dehydrogenase activity","type":"related"},{"name":"L-iditol:NAD oxidoreductase activity","type":"related"},{"name":"L-iditol:NAD+ 5-oxidoreductase activity","type":"related"},{"name":"NAD+-dependent sorbitol dehydrogenase activity","type":"related"},{"name":"NAD-dependent sorbitol dehydrogenase activity","type":"related"},{"name":"NAD-sorbitol dehydrogenase","type":"related"},{"name":"glucitol dehydrogenase activity","type":"related"},{"name":"polyol dehydrogenase activity","type":"broad"},{"name":"sorbitol dehydrogenase activity","type":"related"}],"termid":"GO:0003939","terms_by_termid":{"GO:0003939":null}}


id: GO:0004481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid = S-adenosyl-L-homocysteine + phospholipid methylene fatty acid.","definition_xrefs":["EC:2.1.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylene-fatty-acyl-phospholipid synthase activity","secondary_identifiers":["MetaCyc:2.1.1.16-RXN","RHEA:17549"],"synonyms":[{"name":"S-adenosyl-L-methionine:unsaturated-phospholipid methyltransferase (methenylating)","type":"related"},{"name":"cyclopropane synthetase activity","type":"broad"},{"name":"unsaturated-phospholipid methyltransferase activity","type":"broad"}],"termid":"GO:0004481"}


id: PBO:0066059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap guanine nucleotide exchange factor 4","termid":"PBO:0066059"}


id: PBO:0028587
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unstable_protein_localization_to_growing_cell_tip","termid":"PBO:0028587"}


id: PBO:0003697
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sfr1 assembly at DNA damage sites is dependent on Rhp51","termid":"PBO:0003697"}


id: PBO:0067996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 298","termid":"PBO:0067996"}


id: MONDO:0002883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with neuroendocrine differentiation that arises from the small or large intestine. It includes well differentiated neuroendocrine tumors (low and intermediate grade) and poorly differentiated neuroendocrine carcinomas (high grade).","definition_xrefs":["NCIT:C5695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal neoplasm","termid":"MONDO:0021118"},{"relation_name":"is_a","term_name":"digestive system neuroendocrine neoplasm","termid":"MONDO:0024503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal neuroendocrine neoplasm","secondary_identifiers":["MEDGEN:233567","UMLS:C1334231","DOID:4119"],"synonyms":[{"name":"intestinal neuroendocrine benign tumor","type":"related"},{"name":"intestinal neuroendocrine benign tumour","type":"related"},{"name":"intestinal neuroendocrine neoplasm","type":"exact"},{"name":"intestine NET","type":"exact"},{"name":"intestine neuroendocrine neoplasm","type":"exact"},{"name":"intestine neuroendocrine tumor","type":"exact"},{"name":"intestine neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"intestine neuroendocrine tumour","type":"exact"},{"name":"neuroendocrine neoplasm of intestine","type":"exact"},{"name":"neuroendocrine neoplasm of the intestine","type":"exact"},{"name":"neuroendocrine tumor of intestine","type":"exact"},{"name":"neuroendocrine tumour of intestine","type":"exact"}],"termid":"MONDO:0002883","xrefs":{"Monarch":{"xref_id":"0002883"}}}


id: PBO:0047999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 1","termid":"PBO:0047999"}


id: GO:1901972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA-5-methylcytosine glycosylase activity.","definition_xrefs":["PMID:23316050","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA-5-methylcytosine glycosylase activity (obsolete GO:1901972)","synonyms":[{"name":"activation of DNA-5-methylcytosine glycosylase activity","type":"narrow"},{"name":"up regulation of DNA-5-methylcytosine glycosylase activity","type":"exact"},{"name":"up-regulation of DNA-5-methylcytosine glycosylase activity","type":"exact"},{"name":"upregulation of DNA-5-methylcytosine glycosylase activity","type":"exact"}],"termid":"GO:1901972"}


id: MONDO:0004243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelioid sarcoma of the proximal type involving the vulva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal-type epithelioid sarcoma","termid":"MONDO:0004244"},{"relation_name":"is_a","term_name":"vulva sarcoma","termid":"MONDO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar proximal-type epithelioid sarcoma","secondary_identifiers":["NCIT:C40319","MEDGEN:276995","DOID:7491","UMLS:C1520093"],"termid":"MONDO:0004243","xrefs":{"Monarch":{"xref_id":"0004243"}}}


id: PBO:0080034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 20","termid":"PBO:0080034"}


id: GO:0046476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of a monosaccharide (or derivative) by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramide metabolic process","termid":"GO:0006677"},{"relation_name":"is_a","term_name":"glycosphingolipid biosynthetic process","termid":"GO:0006688"},{"relation_name":"is_a","term_name":"ceramide biosynthetic process","termid":"GO:0046513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glycosylceramide biosynthetic process","synonyms":[{"name":"glycosylceramide anabolism","type":"exact"},{"name":"glycosylceramide biosynthesis","type":"exact"},{"name":"glycosylceramide formation","type":"exact"},{"name":"glycosylceramide synthesis","type":"exact"}],"termid":"GO:0046476"}


id: FYPO:0004022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in metaphase under conditions where arrest does not normally occur, with polar microtubules that are longer than normal.","definition_xrefs":["PMID:16079915","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"long polar microtubules","termid":"FYPO:0004021"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic metaphase","termid":"FYPO:0000620"},{"relation_name":"is_a","term_name":"long polar microtubules","termid":"FYPO:0004021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002399","FYPO:0005447","FYPO:0000631","FYPO:0000054"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic metaphase with long polar microtubules","synonyms":[{"name":"abnormal cell cycle arrest in metaphase with long polar microtubules during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic metaphase with condensed chromosomes and long polar microtubules","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic metaphase with elongated polar microtubules","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic metaphase with long polar microtubules during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in metaphase with long polar microtubules","type":"exact"},{"name":"abolished mitotic metaphase/anaphase transition with long polar microtubules","type":"related"}],"termid":"FYPO:0004022"}


id: GO:2001232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to prospore membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to plasma membrane","termid":"GO:1903078"},{"relation_name":"is_a","term_name":"regulation of protein localization to prospore membrane","termid":"GO:2001231"},{"relation_name":"positively_regulates","term_name":"protein localization to prospore membrane","termid":"GO:1902657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to prospore membrane","synonyms":[{"name":"positive regulation of protein localisation to prospore membrane","type":"exact"},{"name":"positive regulation of protein targeting to FSM","type":"related"},{"name":"positive regulation of protein targeting to ascospore-type prospore membrane","type":"related"},{"name":"positive regulation of protein targeting to forespore membrane","type":"related"},{"name":"positive regulation of protein targeting to prospore membrane","type":"related"},{"name":"positive regulation of protein-prospore membrane targeting","type":"related"}],"termid":"GO:2001232"}


id: MONDO:0020048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Internal carotid artery (ICA) agenesis (uni or bilateral) is a developmental defect that may be asymptomatic or lead to cerebrovascular lesions. It is a rare malformation, with only around hundred cases reported in the literature. When symptoms are present, they are caused by cerebrovascular insufficiency, compression of the brain by vessels that dilate to compensate for the absence of the ICA, or the presence of an aneurysm. Associated intracranial aneurysms occur in 25 to 35% of patients and are often responsible for intracranial hemorrhage, which may present as the initial symptom. The absence of the ICA is the result of either agenesis or aplasia. The term agenesis is used when both the ICA and its bony canal are absent, whereas there is some evidence of carotid canals in cases of aplasia. The absence of the ICA can be detected by angiography or by computerized tomography.","definition_xrefs":["Orphanet:981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal carotid agenesis","secondary_identifiers":["icd11.foundation:368564890","GARD:3012","MEDGEN:928576","UMLS:C4302907","SCTID:722004001"],"synonyms":[{"name":"agenesis of the internal carotid artery","type":"related"},{"name":"internal carotid artery agenesis","type":"related"}],"termid":"MONDO:0020048","xrefs":{"Monarch":{"xref_id":"0020048"}}}


id: PBO:0072891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strawberry notch homolog 2","termid":"PBO:0072891"}


id: SO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A part of a primary transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"},{"relation_name":"part_of","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary_transcript_region","synonyms":[{"name":"primary transcript region","type":"exact"}],"termid":"SO:0000835"}


id: PBO:0086419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase activating protein (GAP) with a role in exocytosis; stimulates Gyp5p GAP activity on Ypt1p, colocalizes with Gyp5p at sites of polarized growth; interacts with Gyp5p, Rvs161p, and Rvs167p; involved in recruiting Rvs167p to the bud tip during polarized growth; increases in abundance and relocalizes from bud neck to cytoplasm upon DNA replication stress; GYL1 has a paralog, GYP5, that arose from the whole genome duplication","termid":"PBO:0086419"}


id: GO:0021835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that result in the migration of interneuron precursors up a concentration gradient towards the olfactory bulb.","definition_xrefs":["PMID:12626695","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"embryonic olfactory bulb interneuron precursor migration","termid":"GO:0021831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction involved in embryonic olfactory bulb interneuron precursor migration","synonyms":[{"name":"positive chemotaxis involved in embryonic olfactory bulb interneuron precursor migration","type":"exact"}],"termid":"GO:0021835"}


id: PBO:0056765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 16, N6-methyladenosine","termid":"PBO:0056765"}


id: GO:0032988
data:
  {"annotated_genes":["SJAG_00597","SJAG_03301","SJAG_02560","SJAG_00206","SJAG_05025"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57266,78898,88119,75303,104833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000390"}]},"cv_name":"biological_process","definition":"The disaggregation of a protein-RNA complex into its constituent components.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"is_a","term_name":"protein-RNA complex organization","termid":"GO:0071826"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00206":null,"SJAG_00597":null,"SJAG_02560":null,"SJAG_03301":null,"SJAG_05025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-RNA complex disassembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA-protein complex disassembly","type":"exact"},{"name":"RNP complex disassembly","type":"exact"},{"name":"ribonucleoprotein complex disassembly","type":"exact"}],"termid":"GO:0032988","terms_by_termid":{"GO:0000390":null}}


id: MOD:00445
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-homoarginine, such as reaction with O-methylisourea.","definition_xrefs":["PubMed:11821862","PubMed:11078590","OMSSA:53","PubMed:11085420","Unimod:52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-homoarginine","synonyms":[{"name":"Guanidination","type":"related"},{"name":"Guanidinyl","type":"related"},{"name":"guanidinationk","type":"exact"}],"termid":"MOD:00445"}


id: PBO:0036089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_following_cellular_response_to_UV","termid":"PBO:0036089"}


id: PATO:0002115
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's containing fibrin.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinoid","termid":"PATO:0002115"}


id: GO:0052049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a type III secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type III secretion system (obsolete GO:0052049)","termid":"GO:0052049"}


id: GO:0032549
data:
  {"annotated_genes":["SJAG_04410","SJAG_03578","SJAG_00637","SJAG_04030"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61141,62650,64390],"is_not":false,"summary":null,"term":"GO:0032549"},{"annotations":[115992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905108"}]},"cv_name":"molecular_function","definition":"Binding to a ribonucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked to ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside binding","termid":"GO:0001882"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_03578":null,"SJAG_04030":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ribonucleoside binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0032549","terms_by_termid":{"GO:0032549":null,"GO:1905108":null}}


id: GO:0009162
data:
  {"annotated_genes":["SJAG_01974","SJAG_01055","SJAG_03771","SJAG_04627","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76131,117479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009159"},{"annotations":[70277,79842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[70276,79815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a deoxyribonucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate metabolic process","termid":"GO:0009123"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_01974":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"deoxyribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009162","terms_by_termid":{"GO:0006226":null,"GO:0006231":null,"GO:0009159":null}}


id: PBO:0085464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted tail-anchored plasma membrane protein; contains conserved CYSTM module; related proteins in other organisms may be involved in response to stress; N- and C-terminal fusion proteins localize to the cell periphery; YDR034W-B has a paralog, YBR056W-A, that arose from the whole genome duplication","termid":"PBO:0085464"}


id: MONDO:0007850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of KID syndrome.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"KID syndrome","termid":"MONDO:0018781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"autosomal dominant keratitis-ichthyosis-hearing loss syndrome","secondary_identifiers":["UMLS:C0265336","DOID:0060871","MEDGEN:120536","OMIM:148210"],"synonyms":[{"name":"KID syndrome, autosomal dominant","type":"exact"},{"name":"autosomal dominant KID syndrome","type":"exact"},{"name":"autosomal dominant keratitis-ichthyosis-deafness syndrome","type":"narrow"},{"name":"keratitis-ichthyosis -deafness syndrome","type":"exact"},{"name":"keratitis-ichthyosis-deafness syndrome, autosomal dominant","type":"narrow"}],"termid":"MONDO:0007850","xrefs":{"Monarch":{"xref_id":"0007850"}}}


id: MONDO:0013591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple epiphyseal dysplasia in which the cause of the disease is a mutation in the COL9A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia due to collagen 9 anomaly","termid":"MONDO:0015627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"epiphyseal dysplasia, multiple, 6","secondary_identifiers":["MEDGEN:436517","GARD:13376","OMIM:614135","UMLS:C2675767","DOID:0070301"],"synonyms":[{"name":"COL9A1 multiple epiphyseal dysplasia (disease)","type":"exact"},{"name":"EDM6","type":"related"},{"name":"epiphyseal dysplasia, multiple, 6","type":"exact"},{"name":"epiphyseal dysplasia, multiple, type 6","type":"exact"},{"name":"multiple epiphyseal dysplasia (disease) caused by mutation in COL9A1","type":"exact"},{"name":"multiple epiphyseal dysplasia 6","type":"related"}],"termid":"MONDO:0013591","xrefs":{"Monarch":{"xref_id":"0013591"}}}


id: PBO:0016986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 protein binding protein Mug184","termid":"PBO:0016986"}


id: PBO:0038575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abraxas 1, BRCA1 A complex subunit","termid":"PBO:0038575"}


id: MONDO:1012644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any von Willebrand disease that occurs in pigs and is characterized by no detectable or a severe quantitative deficiency of the glycoprotein von Willebrand factor (vWF) due to a mutation in the VWF gene.","definition_xrefs":["OMIA:001058-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Von Willebrand disease, pig","termid":"MONDO:1011615"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand disease III, pig","termid":"MONDO:1012644","xrefs":{"Monarch":{"xref_id":"1012644"}}}


id: FYPO:0001840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at a higher frequency than normal during the vegetative growth phase of the life cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"increased minichromosome loss","termid":"FYPO:0001859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased minichromosome loss during vegetative growth","synonyms":[{"name":"increased minichromosome loss during mitotic cell cycle","type":"related"},{"name":"mitotic minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0001840"}


id: PBO:0049539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 3","termid":"PBO:0049539"}


id: GO:0050314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,3-diaminopropane + S-adenosylmethioninamine = S-methyl-5'-thioadenosine + bis(3-aminopropyl)amine + H+.","definition_xrefs":["RHEA:23244","EC:2.5.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"sym-norspermidine synthase activity","secondary_identifiers":["KEGG_REACTION:R03271","MetaCyc:SYM-NORSPERMIDINE-SYNTHASE-RXN"],"synonyms":[{"name":"S-adenosylmethioninamine:propane-1,3-diamine 3-aminopropyltransferase activity","type":"related"}],"termid":"GO:0050314"}


id: GO:0075148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of signal transduction in response to host (obsolete GO:0075148)","synonyms":[{"name":"positive regulation of symbiont signal transduction in response to host","type":"exact"}],"termid":"GO:0075148"}


id: PBO:0050265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 43","termid":"PBO:0050265"}


id: MONDO:0045029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Deuteromycetes infectious disease (obsolete MONDO:0045029)","secondary_identifiers":["SCTID:59258008"],"synonyms":[{"name":"infection by Deuteromycetes","type":"exact"},{"name":"infection caused by Deuteromycetes","type":"related"}],"termid":"MONDO:0045029","xrefs":{"Monarch":{"xref_id":"0045029"}}}


id: FYPO:0004935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during exit from mitosis is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during exit from mitosis","synonyms":[{"name":"decreased RNA accumulation during exit from mitosis","type":"related"},{"name":"decreased RNA level during exit from mitosis during mitotic cell cycle","type":"exact"},{"name":"decreased RNA level during exit from mitosis during vegetative growth","type":"exact"},{"name":"decreased RNA level during mitotic M/G1 transition","type":"related"},{"name":"decreased RNA level during mitotic exit","type":"exact"},{"name":"decreased transcript level during exit from mitosis","type":"exact"},{"name":"reduced RNA level during exit from mitosis","type":"exact"}],"termid":"FYPO:0004935"}


id: GO:0070913
data:
  {"annotated_genes":["SJAG_03454","SJAG_01480"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88700,91204],"is_not":false,"summary":null,"term":"GO:0070913"}]},"cv_name":"cellular_component","definition":"A heterodimeric nucleotide-excision repair complex that is involved in transcription-coupled repair. The subunits are known as Ddb1 and Wdr21 in S. pombe; Ddb1 contains a motif called the DDB-box that interacts with adaptor proteins for DDB1/cullin 4 ubiquitin ligases.","definition_xrefs":["PMID:18794354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01480":null,"SJAG_03454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"Ddb1-Wdr21 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070913","terms_by_termid":{"GO:0070913":null}}


id: GO:0016029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded compartment that is found at the base of the rhabdomere and contains stored calcium, InsP3 receptors and smooth endoplasmic reticulum Ca2+-ATPase.","definition_xrefs":["PMID:8646774","PMID:11707492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum subcompartment","termid":"GO:0098827"},{"relation_name":"is_a","term_name":"smooth endoplasmic reticulum cisterna","termid":"GO:0120082"},{"relation_name":"part_of","term_name":"rhabdomere","termid":"GO:0016028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"subrhabdomeral cisterna","synonyms":[{"name":"SMC","type":"related"},{"name":"submicrovillar cisterna","type":"exact"}],"termid":"GO:0016029"}


id: GO:0031908
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of a glyoxysome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal matrix","termid":"GO:0005782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005777","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"glyoxysomal lumen","termid":"GO:0031908"}


id: PBO:0083654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease involved in processing DNA; acts during recombination, repair; promotes template switching during break-induced replication (BIR), causing non-reciprocal translocations (NRTs); cleaves branched structures in complex with Slx1p; involved in interstrand cross-link repair, Rad1p/Rad10p-dependent removal of 3'-nonhomologous tails during DSBR via single-strand annealing; relative distribution to nuclear foci increases upon DNA replication stress; FANCP-related factor","termid":"PBO:0083654"}


id: MONDO:0011725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 Crigler-Najjar syndrome (CNS2) is a hereditary disorder of bilirubin metabolism characterized by unconjugated hyperbilirubinemia due to reduced and inducible activity of hepatic bilirubin glucuronosyltransferase (GT). CNS2 is a milder form of CNS than CNS1.","definition_xrefs":["Orphanet:79235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Crigler-Najjar syndrome","termid":"MONDO:0009044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Crigler-Najjar syndrome type 2","secondary_identifiers":["MedDRA:10011387","icd11.foundation:846453488","UMLS:C2931132","MESH:C536213","GARD:8683","MEDGEN:419718","OMIM:606785","SCTID:68067009"],"synonyms":[{"name":"Arias syndrome","type":"exact"},{"name":"Crigler Najjar syndrome, type 2","type":"related"},{"name":"Crigler-Najjar syndrome, type 2","type":"related"},{"name":"Crigler-Najjar syndrome, type II","type":"related"},{"name":"UGT deficiency type 2","type":"exact"},{"name":"bilirubin uridinediphosphate glucuronosyltransferase deficiency type 2","type":"exact"},{"name":"bilirubin-UGT deficiency type 2","type":"exact"},{"name":"hereditary unconjugated hyperbilirubinemia type 2","type":"exact"},{"name":"hyperbilirubinemia, Crigler-Najjar type 2","type":"related"}],"termid":"MONDO:0011725","xrefs":{"Monarch":{"xref_id":"0011725"}}}


id: PBO:0052082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin interacting protein","termid":"PBO:0052082"}


id: PBO:0111859
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain","termid":"PBO:0111859"}


id: MONDO:0001844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of uterine corpus leiomyoma characterized by extensive myxoid degeneration of the neoplasm connective tissue stroma.","definition_xrefs":["NCIT:C40166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine corpus leiomyoma","termid":"MONDO:0007886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus myxoid leiomyoma","secondary_identifiers":["MEDGEN:275558","DOID:13956","UMLS:C1519860"],"termid":"MONDO:0001844","xrefs":{"Monarch":{"xref_id":"0001844"}}}


id: PBO:0108701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp1","termid":"PBO:0108701"}


id: PBO:0056336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 19","termid":"PBO:0056336"}


id: GO:0061686
data:
  {"annotated_genes":["SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103942],"is_not":false,"summary":null,"term":"GO:0061686"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (hercynine) + O2 = hercynylcysteine sulfoxide + H2O.","definition_xrefs":["PMID:24828577","GOC:dph","RHEA:42704","PMID:4276459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hercynylcysteine sulfoxide synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.21.3.10"],"synonyms":[{"name":"hercynylcysteine S-oxide synthase","type":"exact"},{"name":"hercynylcysteine sulfoxide synthase","type":"exact"}],"termid":"GO:0061686","terms_by_termid":{"GO:0061686":null}}


id: GO:0032310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a prostaglandin, any of a group of biologically active metabolites which contain a cyclopentane ring, from a cell or a tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin transport","termid":"GO:0015732"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"is_a","term_name":"icosanoid secretion","termid":"GO:0032309"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"prostaglandin secretion","synonyms":[{"name":"prostacyclin secretion","type":"narrow"}],"termid":"GO:0032310"}


id: GO:0002802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antifungal peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide secretion","termid":"GO:0002796"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide secretion","termid":"GO:0002800"},{"relation_name":"is_a","term_name":"positive regulation of antifungal peptide production","termid":"GO:0002804"},{"relation_name":"positively_regulates","term_name":"antifungal peptide secretion","termid":"GO:0002782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006810","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of antifungal peptide secretion","synonyms":[{"name":"activation of antifungal peptide secretion","type":"narrow"},{"name":"stimulation of antifungal peptide secretion","type":"narrow"},{"name":"up regulation of antifungal peptide secretion","type":"exact"},{"name":"up-regulation of antifungal peptide secretion","type":"exact"},{"name":"upregulation of antifungal peptide secretion","type":"exact"}],"termid":"GO:0002802"}


id: FYPO:0005911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the repair of double-strand breaks formed as part of meiotic recombination begins later than normal.","definition_xrefs":["PomBase:mah","PMID:19023408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination double-strand break repair","termid":"FYPO:0005139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0005447","FYPO:0000293","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of meiotic recombination double-strand break repair","synonyms":[{"name":"delayed meiotic recombination double-strand break repair","type":"exact"},{"name":"delayed onset of DSB repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"delayed onset of double-strand break repair during meiotic recombination","type":"exact"},{"name":"delayed onset of double-strand break repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"delayed onset of meiotic DNA double-strand break repair","type":"exact"}],"termid":"FYPO:0005911"}


id: GO:0075335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its adenylate cyclase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of symbiont adenylate cyclase-mediated signal transduction in response to host (obsolete GO:0075335)","termid":"GO:0075335"}


id: PBO:0056564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex binding protein","termid":"PBO:0056564"}


id: PBO:0055017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2432","termid":"PBO:0055017"}


id: GO:1905256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of RNA binding transcription factor activity.","definition_xrefs":["GOC:TermGenie","GOC:bf","GO_REF:0000059","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of RNA binding transcription factor activity (obsolete GO:1905256)","synonyms":[{"name":"down regulation of RNA binding transcription factor activity","type":"exact"},{"name":"down-regulation of RNA binding transcription factor activity","type":"exact"},{"name":"downregulation of RNA binding transcription factor activity","type":"exact"},{"name":"inhibition of RNA binding transcription factor activity","type":"narrow"}],"termid":"GO:1905256"}


id: MONDO:0018012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tetanus (obsolete MONDO:0018012)","termid":"MONDO:0018012","xrefs":{"Monarch":{"xref_id":"0018012"}}}


id: PBO:0083702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER associated glutathione S-transferase; capable of homodimerization; glutathione transferase for Yvc1p vacuolar cation channel; expression induced during the diauxic shift and throughout stationary phase; functional overlap with Gtt2p, Grx1p, and Grx2p","termid":"PBO:0083702"}


id: PBO:0057046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 135a-1","termid":"PBO:0057046"}


id: PBO:0071775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 3","termid":"PBO:0071775"}


id: PBO:0070163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 77 pseudogene","termid":"PBO:0070163"}


id: PBO:0045014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disco interacting protein 2 homolog C","termid":"PBO:0045014"}


id: MONDO:0014043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephalic primordial dwarfism due to ZNF335 deficiency is characterized by severe antenatal microencephaly, simplified gyration, agenesis of the corpus callosum, absence of basal ganglia (very rare), pontocerebellar atrophy and involvement of the white matter with secondary cerebral atrophy. Congenital cataract, choanal atresia, multiple arthrogryposis and spastic tetraparesis can occur.","definition_xrefs":["Orphanet:329228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephalic primordial dwarfism due to ZNF335 deficiency","secondary_identifiers":["UMLS:C3554499","MEDGEN:767413","OMIM:615095","GARD:17498","DOID:0070294","SCTID:724141003"],"synonyms":[{"name":"MCPH10","type":"related"},{"name":"microcephalic primordial dwarfism, Walsh type","type":"exact"},{"name":"microcephaly 10, primary, autosomal recessive","type":"related"},{"name":"primary autosomal recessive microcephaly 10","type":"related"}],"termid":"MONDO:0014043","xrefs":{"Monarch":{"xref_id":"0014043"}}}


id: GO:0045652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of megakaryocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell differentiation","termid":"GO:0045637"},{"relation_name":"regulates","term_name":"megakaryocyte differentiation","termid":"GO:0030219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of megakaryocyte differentiation","secondary_identifiers":["Reactome:R-HSA-8936459"],"termid":"GO:0045652"}


id: PBO:0055403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2833","termid":"PBO:0055403"}


id: PBO:0065951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD17 pseudogene 2","termid":"PBO:0065951"}


id: MONDO:0013455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the MYOZ2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 16","secondary_identifiers":["DOID:0110322","UMLS:C3151204","OMIM:613838","MEDGEN:462554"],"synonyms":[{"name":"CMH16","type":"exact"},{"name":"MYOZ2 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 16","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 16","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 16","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 16","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in MYOZ2","type":"exact"},{"name":"hypertrophic cardiomyopathy type 16","type":"exact"}],"termid":"MONDO:0013455","xrefs":{"Monarch":{"xref_id":"0013455"}}}


id: PBO:0113102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase involved in rDNA replication and Ty1 transposition; binds to and suppresses DNA damage at G4 motifs in vivo; relieves replication fork pauses at telomeric regions; deletion or inactivation of helicase function suppresses chromosome instability (CIN) associated with centromere or kinetochore defects; structurally and functionally related to Pif1p","termid":"PBO:0113102"}


id: PBO:0051840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor substrate 2","termid":"PBO:0051840"}


id: GO:0102906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = (-)-7-epi-alpha-selinene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.86","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"7-epi-alpha-selinene synthase activity","secondary_identifiers":["RHEA:30383","MetaCyc:RXN-8609"],"termid":"GO:0102906"}


id: PBO:0071772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2 pseudogene 5","termid":"PBO:0071772"}


id: FYPO:0006675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed during conjugation in which a pattern of transcriptional regulation that normally differs between parental genomes has the opposite parental specificity compared to normal. For example, a gene that is normally transcribed first from the P (h+) parental genome is instead transcribed from the M (h-) genome earlier.","definition_xrefs":["PMID:30089908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"reversed parental genome-dependent asymmetric transcription","synonyms":[{"name":"reversed asymmetric transcription from parental genomes","type":"exact"},{"name":"reversed parental genome-dependent transcriptional asymmetry","type":"exact"}],"termid":"FYPO:0006675"}


id: PBO:0059828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription termination factor 2","termid":"PBO:0059828"}


id: PBO:0070696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8 pseudogene 5","termid":"PBO:0070696"}


id: MONDO:0004604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of classical Hodgkin lymphoma with scattered Hodgkin and Reed-Sternberg cells and a nodular or less often diffuse cellular background consisting of small lymphocytes and with an absence of neutrophils and eosinophils. (WHO, 2008)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic Hodgkin lymphoma","termid":"MONDO:0009348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Hodgkin's lymphoma, lymphocytic-histiocytic predominance","secondary_identifiers":["ONCOTREE:LRCHL","ICD9:201.4","icd11.foundation:352299041","GARD:19593","Orphanet:98845","MedDRA:10020231","SCTID:118607005","DOID:8543","UMLS:C1266194","ICDO:9651/3","NCIT:C6913","MEDGEN:224769"],"synonyms":[{"name":"Hodgkin lymphoma, lymphocyte-rich","type":"exact"},{"name":"Hodgkin lymphoma, lymphocytic-histiocytic predominance","type":"exact"},{"name":"Hodgkin's disease, lymphocyte predominance","type":"exact"},{"name":"Hodgkin's disease, lymphocyte predominance [obs]","type":"exact"},{"name":"LRCHL","type":"exact"},{"name":"classic Hodgkin lymphoma, lymphocyte-rich type","type":"exact"},{"name":"lymphocyte rich Hodgkin lymphoma","type":"exact"},{"name":"lymphocyte rich Hodgkin's disease","type":"exact"},{"name":"lymphocyte rich Hodgkin's lymphoma","type":"exact"},{"name":"lymphocyte rich classical Hodgkin lymphoma","type":"exact"},{"name":"lymphocyte rich classical Hodgkin's disease","type":"exact"},{"name":"lymphocyte rich classical Hodgkin's lymphoma","type":"exact"},{"name":"lymphocyte-rich Classic Hodgkin lymphoma","type":"exact"},{"name":"lymphocyte-rich classical Hodgkin lymphoma","type":"exact"},{"name":"lymphocyte-rich classical Hodgkin's lymphoma","type":"exact"}],"termid":"MONDO:0004604","xrefs":{"Monarch":{"xref_id":"0004604"}}}


id: GO:0120039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a plasma membrane bounded cell projection are generated and organized.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection morphogenesis","termid":"GO:0048858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasma membrane bounded cell projection morphogenesis","termid":"GO:0120039"}


id: PBO:0039814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 4 pseudogene 5","termid":"PBO:0039814"}


id: PBO:0064874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 32","termid":"PBO:0064874"}


id: MOD:01243
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a C-terminal residue to the potassium carboxylate salt.","definition_xrefs":["Unimod:530#C-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopotassium salt","termid":"MOD:01072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium carboxylate C-terminal residue","synonyms":[{"name":"Cation:K","type":"related"},{"name":"Replacement of proton by potassium","type":"related"}],"termid":"MOD:01243"}


id: GO:0045234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a palmitoleyl group to a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"protein palmitoleylation","secondary_identifiers":["GO:0045235"],"synonyms":[{"name":"protein amino acid palmitoleylation","type":"exact"}],"termid":"GO:0045234"}


id: MONDO:0006682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting the brachial plexus. It results in severe pain in the upper extremity and shoulder, upper arm weakness and loss of sensation in the upper arm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuritis","termid":"MONDO:0002122"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"brachial plexus neuritis","secondary_identifiers":["EFO:1000843","MESH:D020968","NCIT:C84600","MedDRA:10073002","DOID:3689","SCTID:26609002","MEDGEN:113170","SCTID:72893007","ICD9:723.4","UMLS:C0221759"],"synonyms":[{"name":"acute brachial neuritis","type":"related"},{"name":"acute brachial neuritis syndrome","type":"related"},{"name":"acute brachial radiculitis syndrome","type":"related"},{"name":"acute shoulder neuritis","type":"related"},{"name":"brachial nerve plexus neuritis","type":"exact"},{"name":"brachial neuritis","type":"exact"},{"name":"idiopathic neuralgic amyotrophy","type":"related"},{"name":"neuritis of brachial nerve plexus","type":"exact"},{"name":"parsonage Turner syndrome","type":"related"},{"name":"parsonage-Aldren-Turner syndrome","type":"exact"}],"termid":"MONDO:0006682","xrefs":{"Monarch":{"xref_id":"0006682"}}}


id: PBO:0047959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(22)(q12.2)","termid":"PBO:0047959"}


id: GO:0098914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the atrial cardiomyocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"is_a","term_name":"atrial cardiac muscle cell membrane repolarization","termid":"GO:0099624"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during atrial cardiac muscle cell action potential","synonyms":[{"name":"atrial repolarization","type":"related"},{"name":"electrocardiogram QRS complex","type":"related"}],"termid":"GO:0098914"}


id: PBO:0081695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 618","termid":"PBO:0081695"}


id: PATO:0001630
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being distributed or spread over a considerable extent.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dispersed","termid":"PATO:0001630"}


id: MONDO:0013792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bleeding into one or both cerebral hemispheres including the basal ganglia and the cerebral cortex. It is often associated with hypertension and craniocerebral trauma.","definition_xrefs":["MESH:D002543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracerebral hemorrhage","secondary_identifiers":["UMLS:C2937358","MEDGEN:423648","EFO:0005669","ICD9:431","SCTID:274100004"],"synonyms":[{"name":"stroke, hemorrhagic","type":"exact"}],"termid":"MONDO:0013792","xrefs":{"Monarch":{"xref_id":"0013792"}}}


id: GO:0032043
data:
  {"annotated_genes":["SJAG_01948"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90719],"is_not":false,"summary":null,"term":"GO:0032043"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mitochondrial DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA catabolic process","termid":"GO:0006308"},{"relation_name":"is_a","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"mitochondrial DNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial DNA breakdown","type":"exact"},{"name":"mitochondrial DNA catabolism","type":"exact"},{"name":"mitochondrial DNA degradation","type":"exact"},{"name":"mtDNA breakdown","type":"exact"},{"name":"mtDNA catabolic process","type":"exact"},{"name":"mtDNA catabolism","type":"exact"},{"name":"mtDNA degradation","type":"exact"}],"termid":"GO:0032043","terms_by_termid":{"GO:0032043":null}}


id: GO:0086027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from an AV node cardiac muscle cell to a bundle of His cardiomyocyte.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cardiac conduction","termid":"GO:0086019"},{"relation_name":"is_a","term_name":"AV node cell to bundle of His cell communication","termid":"GO:0086067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"AV node cell to bundle of His cell signaling","synonyms":[{"name":"AV node cell to bundle of His cell signalling","type":"exact"},{"name":"atrioventricular node to bundle of His cell signaling","type":"exact"}],"termid":"GO:0086027"}


id: MONDO:0016230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete simple vascular malformation (obsolete MONDO:0016230)","secondary_identifiers":["Orphanet:211243"],"termid":"MONDO:0016230","xrefs":{"Monarch":{"xref_id":"0016230"}}}


id: PBO:0079791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A12, pseudogene","termid":"PBO:0079791"}


id: PBO:0043155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 23","termid":"PBO:0043155"}


id: GO:0042647
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a proplastid to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid nucleoid","termid":"GO:0042646"},{"relation_name":"part_of","term_name":"proplastid stroma","termid":"GO:0009571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"proplastid nucleoid","termid":"GO:0042647"}


id: PBO:0087732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the signal peptidase complex (SPC); SPC cleaves the signal sequence from proteins targeted to the endoplasmic reticulum (ER); homolog of the SPC12 subunit of mammalian signal peptidase complex; protein abundance increases in response to DNA replication stress","termid":"PBO:0087732"}


id: PBO:0085256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein required for autophagy and CVT; required for cytoplasm-to-vacuole targeting (Cvt) pathway and efficient macroautophagy; cycles between the phagophore assembly site (PAS) and non-PAS locations; forms a complex with Atg9p and Atg27p","termid":"PBO:0085256"}


id: PBO:0074382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG5 nonsense mediated mRNA decay factor","termid":"PBO:0074382"}


id: MONDO:0018724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022","MONDO:0005497"],"is_obsolete":false,"name":"X-linked intellectual disability-cerebellar hypoplasia-spondylo-epiphyseal dysplasia syndrome","secondary_identifiers":["MEDGEN:1811349","UMLS:C5687848","Orphanet:459070","GARD:17815"],"termid":"MONDO:0018724","xrefs":{"Monarch":{"xref_id":"0018724"}}}


id: MONDO:0021078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"},{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glandular papilloma","secondary_identifiers":["NCIT:C6880","MEDGEN:482986","UMLS:C3282896"],"synonyms":[{"name":"glandular papilloma","type":"exact"}],"termid":"MONDO:0021078","xrefs":{"Monarch":{"xref_id":"0021078"}}}


id: PR:P22774-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:P22774-2.","definition_xrefs":["PRO:DNx","UniProtKB:P22774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-)","termid":"PR:P22774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock 70 kDa protein, mitochondrial isoform Short (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:P22774-2"],"synonyms":[{"name":"Spom972h-HSPA9/iso:Short","type":"exact"}],"termid":"PR:P22774-2"}


id: PBO:0004327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-ATPase delta subunit (predicted)","termid":"PBO:0004327"}


id: PBO:0062696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 8 pseudogene","termid":"PBO:0062696"}


id: MONDO:0040871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of primary polydipsia caused by underlying psychiatric symptoms, including those caused by psychoses and rarely by affective disorders.","definition_xrefs":["Wikipedia:Primary_polydipsia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary polydipsia","termid":"MONDO:0040870"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psychogenic polydipsia","secondary_identifiers":["SCTID:15945005","MEDGEN:452478","UMLS:C0395005"],"synonyms":[{"name":"psychogenic polydipsia","type":"exact"}],"termid":"MONDO:0040871","xrefs":{"Monarch":{"xref_id":"0040871"}}}


id: PBO:0061463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 0 group B member 1","termid":"PBO:0061463"}


id: MONDO:0007712
data:
  {"annotated_genes":["SJAG_00322","SJAG_00539"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86079,86080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958175"}]},"cv_name":"mondo","definition":"Oculoauriculovertebral spectrum (OAVS) with radial defects is a rare branchial arches and limb primordia development disorder characterized by variable degrees of uni- or bilateral craniofacial malformation and radial defects that result in extremely variable phenotypic manifestations. Characteristic features include low postnatal weight, short stature, vertebral defects, hearing loss, and facial dysmorphism (incl. facial asymmetry, external, middle, and inner ear malformations, orofacial clefts, and mandibular hypoplasia). These features are invariably associated with radial defects, such as preaxial polydactyly, thumb and/or radius hypoplasia/agenesis, or triphalangeal thumb. Cardiac, pulmonary, renal, and central nervous system involvement has also been reported.","definition_xrefs":["Orphanet:2549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00322":null,"SJAG_00539":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"oculoauriculovertebral spectrum with radial defects","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:3653","SCTID:726722009","UMLS:C0220681","OMIM:141400","MEDGEN:67392"],"synonyms":[{"name":"Goldenhar syndrome with ipsilateral radial defect","type":"related"},{"name":"Moeschler Clarren syndrome","type":"related"},{"name":"Moeschler-Clarren syndrome","type":"exact"},{"name":"Oavs with radial defect","type":"related"},{"name":"hemifacial microsomia with radial defects","type":"related"},{"name":"hemifacial microsomia-radial defects syndrome","type":"exact"},{"name":"microsomia hemifacial radial defects","type":"related"},{"name":"oculoauriculovertebral spectrum with radial defect","type":"related"}],"termid":"MONDO:0007712","terms_by_termid":{"MONDO:0958175":null},"xrefs":{"Monarch":{"xref_id":"0007712"}}}


id: GO:0060022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the hard palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The hard palate is the anterior portion of the palate consisting of bone and mucous membranes.","definition_xrefs":["GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"secondary palate development","termid":"GO:0062009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hard palate development","synonyms":[{"name":"palatum durum development","type":"exact"}],"termid":"GO:0060022"}


id: MONDO:0006681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus borrelia.","definition_xrefs":["MESH:D001899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spirochaetales infections","termid":"MONDO:0021839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Borrelia infectious disease","secondary_identifiers":["EFO:1000842","UMLS:C0006035","MEDGEN:2325","MedDRA:10061591"],"synonyms":[{"name":"Borrelia caused disease or disorder","type":"exact"},{"name":"Borrelia disease or disorder","type":"exact"}],"termid":"MONDO:0006681","xrefs":{"Monarch":{"xref_id":"0006681"}}}


id: GO:0060639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that induces the formation of the salivary gland field by means of the secretion of a signal by a mesenchymal cell and its reception and interpretation by an epithelial cell resulting in it adopting the identity of a salivary gland bud cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"positively_regulates","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of salivary gland formation by mesenchymal-epithelial signaling","synonyms":[{"name":"positive regulation of salivary gland formation by mesenchymal-epithelial signalling","type":"exact"}],"termid":"GO:0060639"}


id: MOD:01728
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["Unimod:737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01728"}


id: MONDO:0018281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital muscular dystrophy with hyperlaxity is a rare, genetic neuromuscular disease characterized by congenital hypotonia, generalized, slowly progressive muscular weakness, and proximal joint contractures with distal joint hypermobility and hyperlaxity. Scoliosis or rigidity of the spine and delayed motor milestones are also frequently reported. Other manifestations include a long myopathic face and, in rare cases, respiratory failure, mild to moderate intellectual deficiency and short stature. Ambulation may be impaired with time.","definition_xrefs":["Orphanet:371007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital muscular dystrophy with hyperlaxity","secondary_identifiers":["SCTID:763314009","UMLS:C4706389","MEDGEN:1633415","GARD:21600"],"synonyms":[{"name":"CMDH","type":"exact"}],"termid":"MONDO:0018281","xrefs":{"Monarch":{"xref_id":"0018281"}}}


