# terms

id: GO:0060135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process occurring in the mother that allows an embryo or fetus to develop within it.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"female pregnancy","termid":"GO:0007565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal process involved in female pregnancy","termid":"GO:0060135"}


id: SO:0000576
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Rearranged genomic DNA of immunoglobulin/T-cell receptor gene including L-part1, V-intron and V-J-exon, with the 5'UTR (SO:0000204) and 3'UTR (SO:0000205).","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VJ_gene_segment","synonyms":[{"name":"V-J-GENE","type":"exact"},{"name":"VJ gene","type":"exact"}],"termid":"SO:0000576"}


id: GO:0005565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial tRNA (obsolete GO:0005565)","synonyms":[{"name":"mitochondrial tRNA","type":"exact"}],"termid":"GO:0005565"}


id: GO:0060019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells of the neural tube give rise to radial glial cells, specialized bipotential progenitors cells of the brain. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glial cell differentiation","termid":"GO:0060019"}


id: FYPO:0006095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin filament bundles is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal actin filament bundle assembly","synonyms":[{"name":"normal actin bundling","type":"exact"},{"name":"normal actin filament bundle assembly during mitotic cell cycle","type":"related"},{"name":"normal actin filament bundle assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0006095"}


id: MONDO:0017219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microform holoprosencephaly is a benign form of holoprosencephaly (HPE) characterized by midline defects without the typical HPE defect in brain cleavage.","definition_xrefs":["Orphanet:280200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"microform holoprosencephaly","secondary_identifiers":["GARD:17290","icd11.foundation:44293173","ICD10CM:Q04.2","MEDGEN:1711978","DOID:0111380","UMLS:C5393309"],"synonyms":[{"name":"HPE, minor form","type":"exact"},{"name":"HPE-L","type":"exact"},{"name":"HoloprosencC)phalie, minor form","type":"exact"},{"name":"Holoprosencéphalie, minor form","type":"exact"},{"name":"Microform HPE","type":"exact"},{"name":"holoprosencephaly-like","type":"exact"}],"termid":"MONDO:0017219","xrefs":{"Monarch":{"xref_id":"0017219"}}}


id: GO:0099054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a presynapse.","definition_xrefs":["PMID:24449494","GOC:PARL","GOC:bf","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"presynapse organization","termid":"GO:0099172"},{"relation_name":"part_of","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"presynapse assembly","synonyms":[{"name":"presynapse biogenesis","type":"exact"},{"name":"presynaptic terminal assembly","type":"exact"}],"termid":"GO:0099054"}


id: GO:1904148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonylphenol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:19260726","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to nonylphenol","termid":"GO:1904147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nonylphenol","termid":"GO:1904148"}


id: MONDO:0015310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic optic nerve hypoplasia (obsolete MONDO:0015310)","secondary_identifiers":["Orphanet:137905"],"termid":"MONDO:0015310","xrefs":{"Monarch":{"xref_id":"0015310"}}}


id: PBO:0000960
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fission yeast Fun Thirty","termid":"PBO:0000960"}


id: PBO:0077018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS4 antisense RNA 1","termid":"PBO:0077018"}


id: PBO:0002966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase (RNR) inhibitor","termid":"PBO:0002966"}


id: PBO:0018165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metallopeptidase, tRNA N6-threonyl-carbamoyl-adenosine (t6A), a modification protein Pgp1","termid":"PBO:0018165"}


id: MONDO:0009787
data:
  {"annotated_genes":["SJAG_02641"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87275],"is_not":false,"summary":null,"term":"MONDO:0009787"}]},"cv_name":"mondo","definition":"3-methylglutaconic aciduria type III (MGA III) is an organic aciduria characterized by the association of optic atrophy and choreoathetosis with 3-methylglutaconic aciduria.","definition_xrefs":["Orphanet:67047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-methylglutaconic aciduria type 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:258501","DOID:0110004","MEDGEN:108273","SCTID:297232009","MESH:C535311","NANDO:1200992","GARD:5663","UMLS:C0574084","icd11.foundation:535412248"],"synonyms":[{"name":"3-alpha methylglutaconic aciduria type III","type":"related"},{"name":"3-methylglutaconic aciduria caused by mutation in OPA3","type":"exact"},{"name":"3-methylglutaconic aciduria type III","type":"exact"},{"name":"3-methylglutaconic aciduria, type 3","type":"related"},{"name":"3-methylglutaconic aciduria, type III","type":"related"},{"name":"Costeff optic atrophy syndrome","type":"exact"},{"name":"Costeff syndrome","type":"exact"},{"name":"Iraqi Jewish optic atrophy plus","type":"related"},{"name":"Iraqi-Jewish 'optic atrophy plus'","type":"related"},{"name":"Iraqi-Jewish optic atrophy plus","type":"exact"},{"name":"MGA type III","type":"related"},{"name":"MGA, type 3","type":"related"},{"name":"MGA3","type":"exact"},{"name":"MGCA3","type":"related"},{"name":"OPA3 3-methylglutaconic aciduria","type":"exact"},{"name":"OPA3 defect","type":"broad"},{"name":"OPA3, autosomal recessive","type":"related"},{"name":"autosomal recessive optic atrophy plus syndrome","type":"exact"},{"name":"autosomal recessive optic atrophy type 3","type":"exact"},{"name":"infantile optic atrophy with chorea and spastic paraplegia","type":"exact"},{"name":"optic atrophy 3, autosomal recessive","type":"related"},{"name":"optic atrophy infantile with chorea and spastic paraplegia","type":"related"},{"name":"optic atrophy plus syndrome","type":"related"},{"name":"optic atrophy, infantile, with chorea and spastic paraplegia","type":"related"}],"termid":"MONDO:0009787","terms_by_termid":{"MONDO:0009787":null},"xrefs":{"Monarch":{"xref_id":"0009787"}}}


id: MONDO:0021127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An characteristic of a disease in which the disease is not manifested as an isolated feature but has multiple distinct features.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic or isolated","termid":"MONDO:0021126"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has a syndromic presentation","termid":"MONDO:0021127","xrefs":{"Monarch":{"xref_id":"0021127"}}}


id: PBO:0069306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 562, pseudogene","termid":"PBO:0069306"}


id: GO:1901162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of primary amino compound.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary amino compound biosynthetic process","synonyms":[{"name":"primary amino compound anabolism","type":"exact"},{"name":"primary amino compound biosynthesis","type":"exact"},{"name":"primary amino compound formation","type":"exact"},{"name":"primary amino compound synthesis","type":"exact"}],"termid":"GO:1901162"}


id: GO:0050326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: taxifolin + NAD(P)H + H+ + O2 = 2,3-dihydrogossypetin + NAD(P)+ + H2O.","definition_xrefs":["MetaCyc:TAXIFOLIN-8-MONOOXYGENASE-RXN","EC:1.14.13.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"taxifolin 8-monooxygenase activity","synonyms":[{"name":"taxifolin hydroxylase activity","type":"exact"},{"name":"taxifolin,NAD(P)H:oxygen oxidoreductase (8-hydroxylating)","type":"related"}],"termid":"GO:0050326"}


id: PBO:0041101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSD domain containing 1","termid":"PBO:0041101"}


id: PBO:0071779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 7","termid":"PBO:0071779"}


id: GO:0001181
data:
  {"annotated_genes":["SJAG_04083","SJAG_00692","SJAG_01744","SJAG_02813","SJAG_04766","SJAG_05331","SJAG_01712","SJAG_02747","SJAG_00421","SJAG_00202"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64203,71764,72690,93519,95913,105598,107997,109462,110044,116750],"is_not":false,"summary":null,"term":"GO:0001181"}]},"cv_name":"molecular_function","definition":"A general transcription initiation factor activity that contributes to transcription start site selection and transcription initiation of genes transcribed by RNA polymerase I. Factors required for RNA polymerase I transcription initiation include upstream activation factor (UAF), core factor (CF), TATA binding protein (TBP) and RRN3. In all species characterized, RNA polymerase I transcribes a large polycistronic transcript that is processed into several mature rRNAs (3 or 4 depending on the species), including the large subunit rRNA (28S in humans), the small subunit rRNA (18S in humans), as well as one or two additional smaller rRNAs (the 5.8S rRNA in humans). In most species, this large rRNA transcript is the sole product of RNA polymerase I. However there are rare exceptions, such as Trypanosoma brucei, where RNA polymerase I also transcribes certain mRNAs.","definition_xrefs":["PMID:25346433","PMID:11500378","PMID:28340337","PMID:28842442","PMID:31358304","GOC:txnOH-2018","PMID:17972917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor activity","termid":"GO:0140223"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00202":null,"SJAG_00421":null,"SJAG_00692":null,"SJAG_01712":null,"SJAG_01744":null,"SJAG_02747":null,"SJAG_02813":null,"SJAG_04083":null,"SJAG_04766":null,"SJAG_05331":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140223"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140223","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase I general transcription initiation factor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase I transcription general initiation factor activity","type":"exact"},{"name":"core RNA polymerase I binding transcription factor activity","type":"broad"},{"name":"general RNA polymerase I transcription factor activity","type":"exact"},{"name":"transcription factor activity, core RNA polymerase I binding","type":"broad"}],"termid":"GO:0001181","terms_by_termid":{"GO:0001181":null}}


id: MONDO:0020512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"precursor T-cell acute lymphoblastic leukemia","secondary_identifiers":["Orphanet:99861","icd11.foundation:803161771","EFO:1001830","GARD:19694"],"synonyms":[{"name":"T-ALL","type":"broad"},{"name":"precursor T-cell acute lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor T-cell acute lymphocytic leukaemia","type":"exact"},{"name":"precursor T-cell acute lymphocytic leukemia","type":"exact"},{"name":"precursor T-cell acute lymphocytic leukemia/lymphoma","type":"exact"}],"termid":"MONDO:0020512","xrefs":{"Monarch":{"xref_id":"0020512"}}}


id: GO:0120335
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Radial spoke 3 (RS3), when present, is the most distal of each group of radial spokes, whether grouped as triplets or doublets. RS3 has significantly different morphology and protein composition than RS1 and RS2 and also extends at a slant from the microtubule doublet, rather than perpendicularly like RS1 and RS2. In some organisms (e.g. Chlamydomonas and Sarcophaga bullata), RS3 is represented only as a stump attached to the A-microtubule lacking the rest of the stalk structure and entirely lacking the head structure.","definition_xrefs":["ISBN:0124325653","GOC:krc","PMID:25694453","PMID:9450971","PMID:22754630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke","termid":"GO:0001534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"radial spoke 3","synonyms":[{"name":"RS3","type":"related"}],"termid":"GO:0120335"}


id: GO:0106149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-carbonyl nitrile + NADPH +O2=4-hydroxyindole-3- carbonyl nitrile + NADP+ + H20.","definition_xrefs":["PMID:26352477","RHEA:57864","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indole-3-carbonyl nitrile 4-hydroxylase activity","secondary_identifiers":["EC:1.14.14.165"],"termid":"GO:0106149"}


id: GO:0006754
data:
  {"annotated_genes":["SJAG_MIT09","SJAG_00542","SJAG_00438","SJAG_03114","SJAG_00985","SJAG_02564","SJAG_04122","SJAG_02598","SJAG_07003","SJAG_00915","SJAG_MIT37","SJAG_04422","SJAG_MIT15","SJAG_00836","SJAG_00133","SJAG_05204","SJAG_02105","SJAG_03925"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118306],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[119373,103966,93627,94210,108210,108118,105330,93196,95181,116147,103995,89471,109099,103349,102133,119361,119367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate biosynthetic process","termid":"GO:0009206"},{"relation_name":"is_a","term_name":"ATP metabolic process","termid":"GO:0046034"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ATP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006758","GO:0006759"],"synonyms":[{"name":"ATP anabolism","type":"exact"},{"name":"ATP biosynthesis","type":"exact"},{"name":"ATP formation","type":"exact"},{"name":"ATP regeneration","type":"narrow"},{"name":"ATP synthesis","type":"exact"}],"termid":"GO:0006754","terms_by_termid":{"GO:0042776":null,"GO:1905707":null}}


id: PBO:0077434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 168","termid":"PBO:0077434"}


id: PBO:0048027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen silencer binding protein","termid":"PBO:0048027"}


id: PBO:0053297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM zinc finger domain containing 3","termid":"PBO:0053297"}


id: MONDO:0971127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic eye infection","termid":"MONDO:0020947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"diffuse unilateral subacute neuroretinitis","secondary_identifiers":["MEDGEN:573129","UMLS:C0339404","Orphanet:674947"],"termid":"MONDO:0971127","xrefs":{"Monarch":{"xref_id":"0971127"}}}


id: GO:0006662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycerol ether metabolic process","synonyms":[{"name":"glycerol ether metabolism","type":"exact"}],"termid":"GO:0006662"}


id: GO:0047933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glyceroyl phosphate + alpha-D-glucose 1-phosphate = 3-phospho-D-glycerate + alpha-D-glucose 1,6-bisphosphate + H+.","definition_xrefs":["EC:2.7.1.106","RHEA:16769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"glucose-1,6-bisphosphate synthase activity","secondary_identifiers":["KEGG_REACTION:R01660","MetaCyc:GLUCOSE-16-BISPHOSPHATE-SYNTHASE-RXN","Reactome:R-HSA-8955760"],"synonyms":[{"name":"3-phospho-D-glyceroyl-phosphate:D-glucose-1-phosphate 6-phosphotransferase activity","type":"related"},{"name":"3-phospho-D-glyceroyl-phosphate:alpha-D-glucose-1-phosphate 6-phosphotransferase activity","type":"related"},{"name":"glucose 1,6-diphosphate synthase activity","type":"related"},{"name":"glucose-1,6-bisphosphate synthetase activity","type":"related"}],"termid":"GO:0047933"}


id: GO:0009860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of pollen via tip extension of the intine wall.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell tip growth","termid":"GO:0009932"},{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"pollen tube development","termid":"GO:0048868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen tube growth","termid":"GO:0009860"}


id: PBO:0043286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member O, pseudogene","termid":"PBO:0043286"}


id: GO:0030964
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integral membrane complex that possesses NADH oxidoreductase activity. The complex is one of the components of the electron transport chain. It catalyzes the transfer of a pair of electrons from NADH to a quinone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NADH dehydrogenase complex","secondary_identifiers":["GO:0045280","GO:0030966","GO:0031675","GO:0031678","Wikipedia:NADH_dehydrogenase","GO:0031677","GO:0030025"],"synonyms":[{"name":"NADH dehydrogenase complex (plastoquinone)","type":"narrow"},{"name":"NADH dehydrogenase complex (quinone)","type":"narrow"},{"name":"NADH dehydrogenase complex (ubiquinone)","type":"narrow"},{"name":"NADH:plastoquinone reductase complex","type":"narrow"},{"name":"plastid NADH dehydrogenase complex (plastoquinone)","type":"narrow"}],"termid":"GO:0030964"}


id: PR:O94268
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nop2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"25S rRNA (cytosine-C(5))-methyltransferase nop2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.20c","synonyms":[{"name":"Spom972h-nop2","type":"exact"},{"name":"nucleolar protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94268"}


id: GO:0032617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The appearance of interleukin-14 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 production (obsolete GO:0032617)","synonyms":[{"name":"IL-14 production","type":"exact"},{"name":"interleukin-14 biosynthetic process","type":"narrow"},{"name":"interleukin-14 secretion","type":"narrow"}],"termid":"GO:0032617"}


id: PBO:0050418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein D pseudogene 2","termid":"PBO:0050418"}


id: MONDO:0002896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The subclinical or symptomatic stage of syphilis, occurring at an average of three weeks after contact with an infected individual. It manifests with one or more painless, indurated ulcers (chancres) of the skin or mucous membranes at the site of inoculation. These lesions heal spontaneously within a few weeks.","definition_xrefs":["NCIT:C128412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syphilis","termid":"MONDO:0005976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary syphilis","secondary_identifiers":["UMLS:C2931317","MESH:C536772","ICD9:091","MEDGEN:419772","SCTID:186846005","DOID:4156"],"synonyms":[{"name":"early symptomatic syphilis","type":"exact"},{"name":"early syphilis, symptomatic","type":"exact"},{"name":"symptomatic early syphilis","type":"exact"}],"termid":"MONDO:0002896","xrefs":{"Monarch":{"xref_id":"0002896"}}}


id: GO:0030777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-scoulerine + S-adenosyl-L-methionine(1+) = (S)-tetrahydrocolumbamine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.117","RHEA:23808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(S)-scoulerine 9-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.117-RXN","KEGG_REACTION:R03835"],"synonyms":[{"name":"S-adenosyl-L-methionine:(S)-scoclaurine 9-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:(S)-scoulerine 9-O-methyltransferase activity","type":"related"}],"termid":"GO:0030777"}


id: PBO:0041121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTBD3 antisense RNA 1","termid":"PBO:0041121"}


id: GO:0006702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"androgen metabolic process","termid":"GO:0008209"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"androgen biosynthetic process","secondary_identifiers":["Reactome:R-HSA-193048"],"synonyms":[{"name":"androgen anabolism","type":"exact"},{"name":"androgen biosynthesis","type":"exact"},{"name":"androgen formation","type":"exact"},{"name":"androgen synthesis","type":"exact"}],"termid":"GO:0006702"}


id: PBO:0069266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 522, pseudogene","termid":"PBO:0069266"}


id: FYPO:0007648
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to pericentric heterochromatin is abnormal.","definition_xrefs":["PomBase:mah","GO:1902682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin","termid":"FYPO:0004718"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to pericentric heterochromatin","synonyms":[{"name":"abnormal protein localization to centromeric heterochromatin","type":"exact"},{"name":"abnormal protein localization to nuclear centromeric heterochromatin","type":"exact"}],"termid":"FYPO:0007648"}


id: PBO:0068636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 16, pseudogene","termid":"PBO:0068636"}


id: PBO:0075497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 42","termid":"PBO:0075497"}


id: PBO:0090119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk13","termid":"PBO:0090119"}


id: PBO:0045059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG1 antisense RNA 1","termid":"PBO:0045059"}


id: PBO:0051462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 10-54","termid":"PBO:0051462"}


id: GO:1904333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of error-prone translesion synthesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:kmv","PMID:22761594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of error-prone translesion synthesis","termid":"GO:1904331"},{"relation_name":"is_a","term_name":"positive regulation of DNA biosynthetic process","termid":"GO:2000573"},{"relation_name":"positively_regulates","term_name":"error-prone translesion synthesis","termid":"GO:0042276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"positive regulation of error-prone translesion synthesis","secondary_identifiers":["Reactome:R-HSA-110314"],"synonyms":[{"name":"activation of error-prone postreplication DNA repair","type":"related"},{"name":"activation of error-prone translesion synthesis","type":"narrow"},{"name":"activation of mutagenic PRR","type":"narrow"},{"name":"activation of mutagenic postreplication DNA repair","type":"related"},{"name":"positive regulation of error-prone postreplication DNA repair","type":"related"},{"name":"positive regulation of mutagenic PRR","type":"exact"},{"name":"positive regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"up regulation of error-prone postreplication DNA repair","type":"related"},{"name":"up regulation of error-prone translesion synthesis","type":"exact"},{"name":"up regulation of mutagenic PRR","type":"exact"},{"name":"up regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"up-regulation of error-prone postreplication DNA repair","type":"related"},{"name":"up-regulation of error-prone translesion synthesis","type":"exact"},{"name":"up-regulation of mutagenic PRR","type":"exact"},{"name":"up-regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"upregulation of error-prone postreplication DNA repair","type":"related"},{"name":"upregulation of error-prone translesion synthesis","type":"exact"},{"name":"upregulation of mutagenic PRR","type":"exact"},{"name":"upregulation of mutagenic postreplication DNA repair","type":"related"}],"termid":"GO:1904333"}


id: PBO:0043071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor muscarinic 5","termid":"PBO:0043071"}


id: GO:0006536
data:
  {"annotated_genes":["SJAG_00529","SJAG_03306","SJAG_04145","SJAG_00495","SJAG_00937","SJAG_03434","SJAG_03224","SJAG_03457","SJAG_01903","SJAG_00714","SJAG_04054","SJAG_00359","SJAG_00695","SJAG_01592","SJAG_03266","SJAG_02235"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88184,91223,93281,102937,105068,112121,112213],"is_not":false,"summary":null,"term":"GO:0006536"},{"annotations":[72583,94611,118036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[78645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[80015,92047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[118037,111542,59835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[70616,78374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_00495":null,"SJAG_00529":null,"SJAG_00695":null,"SJAG_00714":null,"SJAG_00937":null,"SJAG_01592":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_03224":null,"SJAG_03266":null,"SJAG_03306":null,"SJAG_03434":null,"SJAG_03457":null,"SJAG_04054":null,"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"glutamate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Glutamic_acid"],"synonyms":[{"name":"glutamate metabolism","type":"exact"},{"name":"glutamic acid metabolic process","type":"exact"},{"name":"glutamic acid metabolism","type":"exact"}],"termid":"GO:0006536","terms_by_termid":{"GO:0006536":null,"GO:0006538":null,"GO:0010133":null,"GO:0019544":null,"GO:0019676":null,"GO:0097054":null}}


id: PBO:0064356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phorbol-12-myristate-13-acetate-induced protein 1","termid":"PBO:0064356"}


id: PBO:0044725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 13 (pseudogene)","termid":"PBO:0044725"}


id: PATO:0001530
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's behavior.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"behavioral quality of a process","synonyms":[{"name":"behavioral quality of occurrent","type":"exact"}],"termid":"PATO:0001530"}


id: PBO:0072936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 16","termid":"PBO:0072936"}


id: PATO:0000516
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having sensitivity toward an external stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitive toward","synonyms":[{"name":"sensitive","type":"exact"}],"termid":"PATO:0000516"}


id: MONDO:0850151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymph node cancer that has material basis in abnormally proliferating cells derives from epithelial cells.","definition_xrefs":["DOID:0080618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymph node cancer","termid":"MONDO:0001082"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"lymph node carcinoma","termid":"MONDO:0850151","xrefs":{"Monarch":{"xref_id":"0850151"}}}


id: GO:0050872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole.","definition_xrefs":["PMID:12508945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat cell differentiation","termid":"GO:0045444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"white fat cell differentiation","secondary_identifiers":["Reactome:R-HSA-381340"],"synonyms":[{"name":"white adipocyte cell differentiation","type":"exact"},{"name":"white adipocyte differentiation","type":"exact"}],"termid":"GO:0050872"}


id: FYPO:0002161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing Calcofluor White.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on Calcofluor White","synonyms":[{"name":"normal cell population growth in presence of Calcofluor White","type":"exact"},{"name":"normal cell population growth on Calcofluor White","type":"exact"},{"name":"normal cellular response to Calcofluor White","type":"related"},{"name":"normal vegetative cell population growth on Calcofluor White","type":"exact"}],"termid":"FYPO:0002161"}


id: PBO:0080037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 23","termid":"PBO:0080037"}


id: PBO:0048774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-mannose pyrophosphorylase A","termid":"PBO:0048774"}


id: PBO:0063270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 16","termid":"PBO:0063270"}


id: MONDO:0009930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arteriovenous malformation (PAVM) describes an anatomic communication between a pulmonary artery and a pulmonary vein leading to a right to left extracardiac shunt that can be asymptomatic or can lead to varying manifestations such as dyspnea, hemoptysis, and neurological symptoms.","definition_xrefs":["Orphanet:2038"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arteriovenous malformation (obsolete MONDO:0009930)","secondary_identifiers":["icd11.foundation:913404991","NCIT:C99029","OMIM:265140","SCTID:303070000","MedDRA:10037332","MESH:C562404","HP:0006548","NANDO:2200295"],"synonyms":[{"name":"PAVM","type":"exact"},{"name":"arteriovenous fistula of pulmonary vessels","type":"exact"},{"name":"pulmonar arteriovenous aneurysm","type":"related"},{"name":"pulmonary AV fistula","type":"exact"},{"name":"pulmonary arterio-veinous fistula","type":"related"},{"name":"pulmonary arteriovenous fistula","type":"exact"},{"name":"pulmonary arteriovenous fistulas","type":"related"},{"name":"pulmonary arteriovenous malformation","type":"exact"},{"name":"pulmonary arteriovenous malformation (disease)","type":"exact"}],"termid":"MONDO:0009930","xrefs":{"Monarch":{"xref_id":"0009930"}}}


id: GO:1903531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of secretion by cell.","definition_xrefs":["GO_REF:0000058","GOC:pm","GOC:TermGenie","PMID:12130530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"negatively_regulates","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of secretion by cell","synonyms":[{"name":"down regulation of secretion by cell","type":"exact"},{"name":"down-regulation of cellular secretion","type":"exact"},{"name":"down-regulation of secretion by cell","type":"exact"},{"name":"downregulation of cellular secretion","type":"exact"},{"name":"downregulation of secretion by cell","type":"exact"},{"name":"inhibition of cellular secretion","type":"narrow"},{"name":"inhibition of secretion by cell","type":"narrow"},{"name":"negative regulation of cellular secretion","type":"exact"},{"name":"down regulation of cellular secretion","type":"exact"}],"termid":"GO:1903531"}


id: MONDO:1011709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder, non-human animal","termid":"MONDO:1011301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear necrosis syndrome, non-human animal","secondary_identifiers":["OMIA:001711"],"termid":"MONDO:1011709","xrefs":{"Monarch":{"xref_id":"1011709"}}}


id: GO:0018041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-glycine acid amide by hydrolysis and oxidation of an interior Gly-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0088"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-glycine amidation (obsolete GO:0018041)","termid":"GO:0018041"}


id: MONDO:0017209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"choroiditis","termid":"MONDO:0001280"},{"relation_name":"is_a","term_name":"endophthalmitis","termid":"MONDO:0016047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"infectious posterior uveitis","secondary_identifiers":["GARD:21066","MEDGEN:1701702","Orphanet:279919","icd11.foundation:1722408748","UMLS:C5230265"],"termid":"MONDO:0017209","xrefs":{"Monarch":{"xref_id":"0017209"}}}


id: PBO:0039495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A18, pseudogene","termid":"PBO:0039495"}


id: GO:1900816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ochratoxin A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ochratoxin A metabolic process","synonyms":[{"name":"Ochratoxin A metabolism","type":"exact"}],"termid":"GO:1900816"}


id: GO:0033056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-ornithine, the D-enantiomer of the amino acid ornithine, i.e. (2R)-2,5-diaminopentanoic acid.","definition_xrefs":["GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"D-ornithine metabolic process","synonyms":[{"name":"D-ornithine metabolism","type":"exact"}],"termid":"GO:0033056"}


id: PBO:0062608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily R member 3 pseudogene","termid":"PBO:0062608"}


id: PBO:0052223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 1","termid":"PBO:0052223"}


id: MONDO:0000040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperphenylalaninemia, BH4-deficient (obsolete MONDO:0000040)","termid":"MONDO:0000040","xrefs":{"Monarch":{"xref_id":"0000040"}}}


id: MONDO:0013433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary sclerosing cholangitis (PSC) is a rare, slowly progressive liver disease characterized by inflammation and destruction of the intra- and/or extra-hepatic bile ducts that lead to cholestasis, liver fibrosis, liver cirrhosis and ultimately liver failure.","definition_xrefs":["Orphanet:171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sclerosing cholangitis","termid":"MONDO:0018646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"primary sclerosing cholangitis","secondary_identifiers":["OMIM:613806","UMLS:C0566602","GARD:1280","NORD:1613","SCTID:197441003","MEDGEN:107565","DOID:0060643","icd11.foundation:857962451","NANDO:2100265","MedDRA:10036732","NANDO:1200440"],"synonyms":[{"name":"PSC","type":"exact"},{"name":"cholangitis, primary sclerosing","type":"related"}],"termid":"MONDO:0013433","xrefs":{"Monarch":{"xref_id":"0013433"}}}


id: GO:0002499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein by endosomal resident proteases contributing to antigen processing and presentation.","definition_xrefs":["PMID:15771591","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"proteolysis within endosome associated with antigen processing and presentation","synonyms":[{"name":"endosomal proteolysis associated with antigen processing and presentation","type":"exact"}],"termid":"GO:0002499"}


id: PBO:0043745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7B","termid":"PBO:0043745"}


id: PBO:0083594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; YAR070C has a paralog, YHR214C-B, that arose from a segmental duplication","termid":"PBO:0083594"}


id: PBO:0038975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP dependent glucokinase","termid":"PBO:0038975"}


id: GO:0090337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins.","definition_xrefs":["GOC:tb","GOC:jh","PMID:12810699","PMID:15923184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament bundle assembly","termid":"GO:0032231"},{"relation_name":"regulates","term_name":"formin-nucleated actin cable assembly","termid":"GO:0070649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"regulation of formin-nucleated actin cable assembly","termid":"GO:0090337"}


id: MONDO:0011707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial dyskinesia and facial myokymia (obsolete MONDO:0011707)","termid":"MONDO:0011707","xrefs":{"Monarch":{"xref_id":"0011707"}}}


id: PBO:0085200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein, needed for accurate chromosome segregation; component of kinetochore sub-complex COMA (Ctf19p, Okp1p, Mcm21p, Ame1p) that functions as platform for kinetochore assembly; required for spindle assembly checkpoint; minimizes potentially deleterious centromere-proximal crossovers by preventing meiotic DNA break formation proximal to centromere; homolog of human centromere constitutive-associated network (CCAN) subunit CENP-P and fission yeast fta2","termid":"PBO:0085200"}


id: GO:0106056
data:
  {"annotated_genes":["SJAG_02858","SJAG_03799"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101313,116430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcineurin-mediated signaling.","definition_xrefs":["PMID:25081204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium-mediated signaling","termid":"GO:0050848"},{"relation_name":"regulates","term_name":"calcineurin-mediated signaling","termid":"GO:0097720"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02858":null,"SJAG_03799":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of calcineurin-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106056","terms_by_termid":{"GO:0106057":null}}


id: PBO:0074838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 32A","termid":"PBO:0074838"}


id: GO:0070205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate = (1R,6R)-2-succinyl-6-hydroxycyclohexa-2,4-diene-1-carboxylate + pyruvate.","definition_xrefs":["RHEA:25597","EC:4.2.99.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity","secondary_identifiers":["MetaCyc:RXN-9310","KEGG_REACTION:R08166"],"synonyms":[{"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase activity","type":"related"},{"name":"6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate synthase activity","type":"related"},{"name":"MenH","type":"related"},{"name":"SHCHC synthase activity","type":"related"},{"name":"YfbB","type":"related"}],"termid":"GO:0070205"}


id: PBO:0061886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodendrocytic myelin paranodal and inner loop protein","termid":"PBO:0061886"}


id: SO:0002219
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant in which the function of a gene product is retained with respect to a reference.","direct_ancestors":[{"relation_name":"is_a","term_name":"functional_effect_variant","termid":"SO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally_normal","synonyms":[{"name":"function retained variant","type":"exact"},{"name":"function_retained_variant","type":"related"},{"name":"functionally normal","type":"related"}],"termid":"SO:0002219"}


id: PBO:0053423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 365","termid":"PBO:0053423"}


id: SO:0002182
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes an antisense long, non-coding RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense_lncRNA_gene","synonyms":[{"name":"antisense lncRNA gene","type":"exact"}],"termid":"SO:0002182"}


id: PBO:0109365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 3","termid":"PBO:0109365"}


id: MOD:00436
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with an N-acetylhexosamine group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-acetylhexosaminylated residue","synonyms":[{"name":"HexNAc","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"}],"termid":"MOD:00436"}


id: SO:0000542
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one DJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_DJ_C_cluster","synonyms":[{"name":"V DJ C cluster","type":"exact"},{"name":"V-(DJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000542"}


id: MONDO:0017944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Invasive non-typhoidal salmonellosis (iNTS) is a rare bacterial infectious disease caused by extraintestinal infection of non-typhoidal serotypes of Salmonella enterica in patients with underlying HIV infection, malaria or malignancy. It has a high mortality rate and patients typically present with fever, pallor and respiratory signs (cough, tachnypnea, pneumonia). Gastrointestinal manifestations (diarrhea, vomit, abdominal pain) are not common. Occasionally, organ absseses, septic shock and meningitis may be observed.","definition_xrefs":["Orphanet:324648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salmonellosis","termid":"MONDO:0000827"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invasive non-typhoidal salmonellosis","secondary_identifiers":["GARD:21449","MEDGEN:1638286","UMLS:C4706572","SCTID:763772002"],"synonyms":[{"name":"iNTS disease","type":"exact"},{"name":"invasive non-typhoidal salmonella disease","type":"exact"}],"termid":"MONDO:0017944","xrefs":{"Monarch":{"xref_id":"0017944"}}}


id: PBO:0033818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit 2-like Tca17 (predicted)","termid":"PBO:0033818"}


id: GO:0070847
data:
  {"annotated_genes":["SJAG_02849","SJAG_04705","SJAG_00297","SJAG_02494","SJAG_00904","SJAG_03573","SJAG_03622","SJAG_04647"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70172,74561,74927,76305,77790,77982,78625,102269],"is_not":false,"summary":null,"term":"GO:0070847"}]},"cv_name":"cellular_component","definition":"A protein complex that interacts with the carboxy-terminal domain of the largest subunit of RNA polymerase II and plays an active role in transducing the signal from a transcription factor to the transcriptional machinery. The core mediator complex has a stimulatory effect on basal transcription, and contains most of the same subdomains as the larger form of mediator complex -- a head domain comprising proteins known in Saccharomyces as Srb2, -4, and -5, Med6, -8, and -11, and Rox3 proteins; a middle domain comprising Med1, -4, and -7, Nut1 and -2, Cse2, Rgr1, Soh1, and Srb7 proteins; and a tail consisting of Gal11p, Med2p, Pgd1p, and Sin4p -- but lacks the regulatory subcomplex comprising Ssn2, -3, and -8, and Srb8 proteins. Metazoan core mediator complexes have similar modular structures and include homologs of yeast Srb and Med proteins.","definition_xrefs":["PMID:16168358","PMID:11454195","PMID:17870225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00297":null,"SJAG_00904":null,"SJAG_02494":null,"SJAG_02849":null,"SJAG_03573":null,"SJAG_03622":null,"SJAG_04647":null,"SJAG_04705":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"core mediator complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"C mediator complex","type":"exact"},{"name":"S mediator complex","type":"exact"}],"termid":"GO:0070847","terms_by_termid":{"GO:0070847":null}}


id: GO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reversible reaction: (R,R)-butane-2,3-diol + NAD+ = (R)-acetoin + NADH + H+.","definition_xrefs":["EC:1.1.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(R,R)-butanediol dehydrogenase activity","secondary_identifiers":["RHEA:24340","MetaCyc:RR-BUTANEDIOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(R)-2,3-butanediol dehydrogenase activity","type":"related"},{"name":"(R)-diacetyl reductase activity","type":"related"},{"name":"1-amino-2-propanol dehydrogenase activity","type":"related"},{"name":"1-amino-2-propanol oxidoreductase activity","type":"related"},{"name":"2,3-butanediol dehydrogenase activity","type":"related"},{"name":"D-(-)-butanediol dehydrogenase activity","type":"related"},{"name":"D-1-amino-2-propanol dehydrogenase activity","type":"related"},{"name":"D-1-amino-2-propanol:NAD(2) oxidoreductase activity","type":"related"},{"name":"D-aminopropanol dehydrogenase activity","type":"related"},{"name":"D-butanediol dehydrogenase activity","type":"related"},{"name":"aminopropanol oxidoreductase activity","type":"related"},{"name":"butylene glycol dehydrogenase activity","type":"related"},{"name":"butyleneglycol dehydrogenase activity","type":"related"},{"name":"diacetyl (acetoin) reductase activity","type":"related"}],"termid":"GO:0000721"}


id: GO:0023010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the initiation of T cell receptor signaling.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of initiation of T cell receptor signaling (obsolete GO:0023010)","synonyms":[{"name":"regulation of initiation of T cell receptor signaling","type":"exact"},{"name":"regulation of initiation of T cell receptor signalling","type":"exact"}],"termid":"GO:0023010"}


id: GO:0015091
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ferric iron (Fe(III) or Fe3+) ions from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transmembrane transporter activity","termid":"GO:0005381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ferric iron transmembrane transporter activity","termid":"GO:0015091"}


id: PBO:0086788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; physical interaction with Atg27p suggests a possible role in autophagy","termid":"PBO:0086788"}


id: PBO:0116733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 interacting DNA helicase 1","termid":"PBO:0116733"}


id: GO:0140776
data:
  {"annotated_genes":["SJAG_04187","SJAG_04566","SJAG_03345","SJAG_03025","SJAG_02624","SJAG_01530"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140775"},{"annotations":[92886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003789"},{"annotations":[89611,104527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140545"},{"annotations":[118454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170060"},{"annotations":[96858,113088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008568"}]},"cv_name":"molecular_function","definition":"A molecular function that involves direct binding to one of the subunits of a protein-containing complex and promoting the dissociation of one or many subunits. This often happens by changing the conformation of the protein being bound, which decreases its affinity for the rest of the complex.","definition_xrefs":["PMID:23727094","PMID:34836783","PMID:29779865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01530":null,"SJAG_02624":null,"SJAG_03025":null,"SJAG_03345":null,"SJAG_04187":null,"SJAG_04566":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"protein-containing complex destabilizing activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein unfoldase activity","type":"broad"}],"termid":"GO:0140776","terms_by_termid":{"GO:0003789":null,"GO:0008568":null,"GO:0140545":null,"GO:0140775":null,"GO:0170060":null}}


id: GO:0140049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endocardial cushion to mesenchymal transition.","definition_xrefs":["PMID:21778427","GOC:BHF","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"},{"relation_name":"regulates","term_name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endocardial cushion to mesenchymal transition","termid":"GO:0140049"}


id: PBO:0003558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-A, phosphatidylinositol N-acetylglucosaminyltransferase subunit Gpi3 (predicted)","termid":"PBO:0003558"}


id: PATO:0002504
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posterodorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterodorsal orientation","synonyms":[{"name":"posterodorsally directed","type":"exact"}],"termid":"PATO:0002504"}


id: PBO:0078648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 2-4","termid":"PBO:0078648"}


id: GO:0034094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the association between sister chromatids of a replicated chromosome is maintained during a meiotic cell cycle.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of sister chromatid cohesion","termid":"GO:0034091"},{"relation_name":"regulates","term_name":"maintenance of meiotic sister chromatid cohesion","termid":"GO:0034090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034094"}


id: PBO:0057762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2052","termid":"PBO:0057762"}


id: PBO:0003445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gtr1/RagA G protein Gtr1 (predicted)","termid":"PBO:0003445"}


id: PBO:0082952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic phosphorelay intermediate osmosensor and regulator; part of a two-component signal transducer that mediates osmosensing via a phosphorelay mechanism; required for mitophagy; dephosphorylated form is degraded by the ubiquitin-proteasome system; potential Cdc28p substrate","termid":"PBO:0082952"}


id: MONDO:0013419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare defect resulting in C1 deficiency and impaired activation of the complement classical pathway. C1 deficiency generally leads to severe immune complex disease with features of systemic lupus erythematosus and glomerulonephritis.","definition_xrefs":["PMID:11390518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"immunodeficiency due to a classical component pathway complement deficiency","termid":"MONDO:0015699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement component C1s deficiency","secondary_identifiers":["MESH:C565170","UMLS:C3151078","GARD:15707","NANDO:2200779","MEDGEN:462428","OMIM:613783"],"synonyms":[{"name":"C1SD","type":"related"},{"name":"C1s deficiency","type":"related"},{"name":"complement component C1s deficiency","type":"exact"}],"termid":"MONDO:0013419","xrefs":{"Monarch":{"xref_id":"0013419"}}}


id: FYPO:0002496
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119915,119916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[119908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cellular metabolic process is normal (i.e. indistinguishable from wild type). A metabolic process is any set of chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances.","definition_xrefs":["GO:0044237","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_02621","SJAG_03118"],"name":"normal metabolic process","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal cellular metabolic process","type":"exact"},{"name":"normal metabolism","type":"exact"}],"termid":"FYPO:0002496","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: GO:1904052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein targeting to vacuole involved in autophagy.","definition_xrefs":["GO_REF:0000058","PMID:22020285","GOC:TermGenie","GOC:pad","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"negative regulation of vacuolar transport","termid":"GO:1903336"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuole involved in autophagy","termid":"GO:1904051"},{"relation_name":"negatively_regulates","term_name":"protein targeting to vacuole involved in autophagy","termid":"GO:0071211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006605","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of protein targeting to vacuole involved in autophagy","synonyms":[{"name":"down regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"down-regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"downregulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"inhibition of protein targeting to vacuole involved in autophagy","type":"narrow"}],"termid":"GO:1904052"}


id: PBO:0075455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 6","termid":"PBO:0075455"}


id: PBO:0079420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 3","termid":"PBO:0079420"}


id: PBO:0060629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCKAP5 intronic transcript 1","termid":"PBO:0060629"}


id: PBO:0041292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C2","termid":"PBO:0041292"}


id: PBO:0090931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF2alpha (Gcn2) kinase inhibitor (human IMPACT homolog) Yih1","termid":"PBO:0090931"}


id: MONDO:0008270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of preaxial polydactyly of fingers, a limb malformation syndrome, that is characterized by the presence of a usually opposable triphalangeal thumb with or without additional duplication of one or more skeletal components of the thumb. The thumb appearance can differ widely in shape (wedge to rectangular) or it can be deviated in the radio-ulnar plane (clinodactyly). PPD2 is also associated with systemic syndromes, including Holt-Oram syndrome and Fanconi anemia.","definition_xrefs":["Orphanet:93336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preaxial polydactyly of fingers","termid":"MONDO:0017425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of a triphalangeal thumb","secondary_identifiers":["icd11.foundation:728781925","OMIM:174500","SCTID:715710001","UMLS:C1868114","GARD:5289","MEDGEN:357423"],"synonyms":[{"name":"PPD2","type":"exact"},{"name":"TPT-PS syndrome","type":"related"},{"name":"polydactyly of triphalangeal thumb","type":"related"},{"name":"polydactyly, preaxial 2","type":"related"},{"name":"polydactyly, preaxial II","type":"related"},{"name":"polydactyly, preaxial type 2","type":"exact"},{"name":"polydactyly, preaxial type II","type":"exact"},{"name":"preaxial polydactyly type 2","type":"exact"},{"name":"triphalangeal thumb","type":"related"},{"name":"triphalangeal thumb with polysyndactyly","type":"related"},{"name":"triphalangeal thumb, type i","type":"exact"},{"name":"triphalangeal thumb-polydactyly syndrome","type":"related"},{"name":"triphalangeal thumb-polysyndactyly syndrome","type":"related"}],"termid":"MONDO:0008270","xrefs":{"Monarch":{"xref_id":"0008270"}}}


id: PATO:0000539
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000539 drought sensitivity value (obsolete PATO:0000539)","termid":"PATO:0000539"}


id: GO:0030289
data:
  {"annotated_genes":["SJAG_00369","SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73025,107714],"is_not":false,"summary":null,"term":"GO:0030289"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex formed by the catalytic subunit of protein phosphatase 4 plus one or more regulatory subunits.","definition_xrefs":["GOC:bhm","PMID:10026142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein phosphatase 4 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030289","terms_by_termid":{"GO:0030289":null}}


id: MONDO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological processes in the sigmoid colon region of the large intestine (intestine, large).","definition_xrefs":["MESH:D012810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic disorder","termid":"MONDO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"sigmoid disease","secondary_identifiers":["MEDGEN:20752","DOID:1897","UMLS:C0037072"],"termid":"MONDO:0002139","xrefs":{"Monarch":{"xref_id":"0002139"}}}


id: GO:0102891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + 2',3,4,4',6'-pentahydroxychalcone = H+ + 2',3,4,4',6'-pentahydroxychalcone 4'-O-beta-D-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2'4'6'34-pentahydroxychalcone 4'-O-glucosyltransferase activity (obsolete GO:0102891)","termid":"GO:0102891"}


id: PBO:0081550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 470","termid":"PBO:0081550"}


id: GO:0036007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A body present in the cytoplasm of some dinoflagellates, which is the source of bioluminescence; emits light on acidification in the presence of oxygen.","definition_xrefs":["PMID:5642469","PMID:4501583","GOC:pr","GOC:mag"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"scintillon","termid":"GO:0036007"}


id: GO:0046438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-cysteine, (S)-2-amino-3-mercaptopropanoic acid, which occurs naturally in firefly luciferin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"D-cysteine metabolic process","synonyms":[{"name":"D-cysteine metabolism","type":"exact"}],"termid":"GO:0046438"}


id: GO:0010677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, extent or frequency of the chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular carbohydrate metabolic process (obsolete GO:0010677)","termid":"GO:0010677"}


id: GO:2001168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H2B ubiquitination.","definition_xrefs":["PMID:12876293"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H2B ubiquitination (obsolete GO:2001168)","termid":"GO:2001168"}


id: GO:0050313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-sulfanylglutathione + O2 + H2O = sulfite + glutathione + 2 H+.","definition_xrefs":["EC:1.13.11.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sulfur dioxygenase activity","secondary_identifiers":["MetaCyc:RXN-13161","Reactome:R-HSA-1614605","RHEA:12981"],"synonyms":[{"name":"S-sulfanylglutathione:oxygen oxidoreductase activity","type":"related"},{"name":"sulfur oxygenase activity","type":"related"},{"name":"sulfur:oxygen oxidoreductase activity","type":"related"},{"name":"sulphur dioxygenase activity","type":"exact"}],"termid":"GO:0050313"}


id: PBO:0073047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 5","termid":"PBO:0073047"}


id: PBO:0005492
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.1.4","termid":"PBO:0005492"}


id: PBO:0001847
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silencing DEfective","termid":"PBO:0001847"}


id: GO:0002151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G-quadruplex RNA structure, in which groups of four guanines adopt a flat, cyclic hydrogen-bonding arrangement known as a guanine tetrad.","definition_xrefs":["PMID:18294969","PMID:18568163","PMID:19330720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"G-quadruplex RNA binding","secondary_identifiers":["Reactome:R-HSA-9836998"],"synonyms":[{"name":"G quadruplex binding","type":"exact"},{"name":"G quartet RNA binding","type":"exact"},{"name":"G quartet binding","type":"broad"},{"name":"G-quartet binding","type":"broad"}],"termid":"GO:0002151"}


id: PBO:0043642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 4","termid":"PBO:0043642"}


id: MONDO:0016538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypotonia-cystinuria syndrome type 1 (obsolete MONDO:0016538)","termid":"MONDO:0016538","xrefs":{"Monarch":{"xref_id":"0016538"}}}


id: MOD:02017
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with an arachidonoylamino group.","direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"arachidonoylated residue","termid":"MOD:02018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-arachidonoylated residue","termid":"MOD:02017"}


id: PBO:0050576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 1","termid":"PBO:0050576"}


id: FYPO:0000144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is abnormal. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin or CENP-A-containing chromatin (the latter is found at the centromere central core).","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gene silencing","termid":"FYPO:0000574"},{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription during vegetative growth","termid":"FYPO:0000624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromatin silencing","synonyms":[{"name":"abnormal chromatin silencing during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin silencing during vegetative growth","type":"exact"}],"termid":"FYPO:0000144"}


id: GO:0098574
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the lysosomal membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"lysosomal membrane","termid":"GO:0005765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"cytoplasmic side of lysosomal membrane","synonyms":[{"name":"external leaflet of lysosomal membrane","type":"exact"},{"name":"external side of lysosomal membrane","type":"exact"}],"termid":"GO:0098574"}


id: GO:0102815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delphinidin 3-O-beta-D-glucoside-5-O-beta-D-glucoside betaine + caffeoyl-CoA = delphinidin 3-O-glucosyl-5-O-caffeoylglucoside + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete caffeoyl-CoA:delphinidin-3,5-diglucoside 5-O-glucoside-6-O-hydroxycinnamoyltransferase activity (obsolete GO:0102815)","termid":"GO:0102815"}


id: PBO:0038706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1","termid":"PBO:0038706"}


id: GO:1903106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of insulin receptor signaling pathway involved in determination of adult lifespan.","definition_xrefs":["PMID:19853560","GOC:TermGenie","GO_REF:0000058","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of insulin receptor signaling pathway involved in determination of adult lifespan (obsolete GO:1903106)","synonyms":[{"name":"activation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"activation of insulin receptor signaling pathway involved in determination of adult lifespan","type":"narrow"},{"name":"activation of insulin receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"activation of insulin receptor signalling pathway of determination of adult lifespan","type":"narrow"},{"name":"positive regulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"positive regulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"positive regulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"},{"name":"up regulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"up regulation of insulin receptor signaling pathway involved in determination of adult lifespan","type":"exact"},{"name":"up regulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"up regulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"},{"name":"up-regulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"up-regulation of insulin receptor signaling pathway involved in determination of adult lifespan","type":"exact"},{"name":"up-regulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"up-regulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"},{"name":"upregulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"upregulation of insulin receptor signaling pathway involved in determination of adult lifespan","type":"exact"},{"name":"upregulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"upregulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"}],"termid":"GO:1903106"}


id: GO:0042617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of paclitaxel, a tetracyclic diterpenoid isolated originally from the bark of the Pacific yew tree, Taxus brevifolia.","definition_xrefs":["GOC:krc","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"paclitaxel biosynthetic process","secondary_identifiers":["GO:0042616"],"synonyms":[{"name":"paclitaxel anabolism","type":"exact"},{"name":"paclitaxel biosynthesis","type":"exact"},{"name":"paclitaxel formation","type":"exact"},{"name":"paclitaxel metabolic process","type":"broad"},{"name":"paclitaxel metabolism","type":"broad"},{"name":"paclitaxel synthesis","type":"exact"},{"name":"taxol biosynthesis","type":"narrow"},{"name":"taxol biosynthetic process","type":"narrow"},{"name":"taxol metabolic process","type":"broad"},{"name":"taxol metabolism","type":"broad"}],"termid":"GO:0042617"}


id: PR:O14252
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6G10.06 gene.","definition_xrefs":["UniProtKB:O14252","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase C6G10.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.06","synonyms":[{"name":"Spom972h-SPAC6G10.06","type":"exact"}],"termid":"PR:O14252"}


id: PBO:0080529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH complex subunit 2A","termid":"PBO:0080529"}


id: MONDO:1010555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spina bifida that occurs in snow leopard.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida, non-human animal","termid":"MONDO:1010047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida, snow leopard","secondary_identifiers":["OMIA:000933-29064"],"termid":"MONDO:1010555","xrefs":{"Monarch":{"xref_id":"1010555"}}}


id: PBO:0073027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scribble planar cell polarity protein","termid":"PBO:0073027"}


id: GO:1900929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-tyrosine import into the cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"L-tyrosine import across plasma membrane","termid":"GO:1903808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of L-tyrosine import across plasma membrane","synonyms":[{"name":"regulation of L-tyrosine import","type":"broad"},{"name":"regulation of L-tyrosine uptake","type":"exact"}],"termid":"GO:1900929"}


id: GO:1902357
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990556"}]},"cv_name":"biological_process","definition":"The process in which 2-isopropylmalate(2-) is transported across a membrane.","definition_xrefs":["GOC:dph","GOC:TermGenie","GOC:vw","PMID:18682385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopropylmalate transport","termid":"GO:0034659"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"2-isopropylmalate(2-) transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902357","terms_by_termid":{"GO:1990556":null}}


id: PBO:0079262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 33","termid":"PBO:0079262"}


id: PBO:0051586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 18 receptor accessory protein","termid":"PBO:0051586"}


id: GO:0010799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-threonine phosphorylation. Peptidyl-threonine phosphorylation is the phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"regulates","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-threonine phosphorylation","termid":"GO:0010799"}


id: FYPO:0001743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which isochromosome formation occurs more frequently than in wild type cells, and in which the break point is located in the imr region in the majority of cases. In isochromosome formation, one chromosome arm is lost and the other arm is duplicated in its place.","definition_xrefs":["PMID:18923422","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased isochromosome formation","termid":"FYPO:0001742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"increased isochromosome formation with preferential breakage in the imr region","synonyms":[{"name":"increased occurrence of isochromosome formation with preferential breakage in the imr region","type":"exact"}],"termid":"FYPO:0001743"}


id: GO:1900982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phenazine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of phenazine biosynthetic process","termid":"GO:1900980"},{"relation_name":"positively_regulates","term_name":"phenazine biosynthetic process","termid":"GO:0002047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phenazine biosynthetic process","synonyms":[{"name":"activation of acridizine biosynthesis","type":"related"},{"name":"activation of acridizine biosynthetic process","type":"related"},{"name":"activation of azophenylene biosynthesis","type":"related"},{"name":"activation of azophenylene biosynthetic process","type":"related"},{"name":"activation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"activation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"activation of dibenzopyrazine biosynthesis","type":"related"},{"name":"activation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"activation of phenazine biosynthetic process","type":"narrow"},{"name":"positive regulation of acridizine biosynthesis","type":"related"},{"name":"positive regulation of acridizine biosynthetic process","type":"related"},{"name":"positive regulation of azophenylene biosynthesis","type":"related"},{"name":"positive regulation of azophenylene biosynthetic process","type":"related"},{"name":"positive regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"positive regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"positive regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"positive regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up regulation of acridizine biosynthesis","type":"related"},{"name":"up regulation of acridizine biosynthetic process","type":"related"},{"name":"up regulation of azophenylene biosynthesis","type":"related"},{"name":"up regulation of azophenylene biosynthetic process","type":"related"},{"name":"up regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"up regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"up regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"up regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up regulation of phenazine biosynthetic process","type":"exact"},{"name":"up-regulation of acridizine biosynthesis","type":"related"},{"name":"up-regulation of acridizine biosynthetic process","type":"related"},{"name":"up-regulation of azophenylene biosynthesis","type":"related"},{"name":"up-regulation of azophenylene biosynthetic process","type":"related"},{"name":"up-regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"up-regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"up-regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"up-regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up-regulation of phenazine biosynthetic process","type":"exact"},{"name":"upregulation of acridizine biosynthesis","type":"related"},{"name":"upregulation of acridizine biosynthetic process","type":"related"},{"name":"upregulation of azophenylene biosynthesis","type":"related"},{"name":"upregulation of azophenylene biosynthetic process","type":"related"},{"name":"upregulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"upregulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"upregulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"upregulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"upregulation of phenazine biosynthetic process","type":"exact"}],"termid":"GO:1900982"}


id: GO:0016680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors, NAD or NADP as acceptor","secondary_identifiers":["EC:1.10.1.-"],"termid":"GO:0016680"}


id: MONDO:0012838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 9q32.","definition_xrefs":["DOID:0110896","PMID:18587394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 16","secondary_identifiers":["OMIM:612259","UMLS:C2677093","MEDGEN:383024","MESH:C567380"],"synonyms":[{"name":"IBD16","type":"exact"},{"name":"inflammatory bowel disease 16","type":"exact"},{"name":"inflammatory bowel disease type 16","type":"exact"}],"termid":"MONDO:0012838","xrefs":{"Monarch":{"xref_id":"0012838"}}}


id: MONDO:0030962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 23","secondary_identifiers":["OMIM:619201","DOID:0112266","GARD:16435","UMLS:C5543092","MEDGEN:1787011"],"synonyms":[{"name":"NPHS23","type":"exact"},{"name":"nephrotic syndrome, type 23","type":"exact"}],"termid":"MONDO:0030962","xrefs":{"Monarch":{"xref_id":"0030962"}}}


id: GO:0015121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: phosphoenolpyruvate(out) + phosphate(in) = phosphoenolpyruvate(in) + phosphate(out).","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"},{"relation_name":"is_a","term_name":"phosphoenolpyruvate transmembrane transporter activity","termid":"GO:0089721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"phosphoenolpyruvate:phosphate antiporter activity","synonyms":[{"name":"PPT","type":"broad"},{"name":"phosphoenolpyruvate/phosphate translocator","type":"exact"}],"termid":"GO:0015121"}


id: GO:0015538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sialate(out) + H+(out) = sialate(in) + H+(in).","definition_xrefs":["TC:2.A.1.12.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialic acid transmembrane transporter activity","termid":"GO:0015136"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"sialic acid:proton symporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-25","Reactome:R-HSA-428585","Reactome:R-HSA-5624239","RHEA:28987"],"synonyms":[{"name":"sialic acid permease activity","type":"related"},{"name":"sialic acid:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015538"}


id: PBO:0063836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phytanoyl-CoA 2-hydroxylase interacting protein like","termid":"PBO:0063836"}


id: PBO:0003384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication fork protection complex subunit Swi1","termid":"PBO:0003384"}


id: MOD:00975
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-chloro-L-tyrosine","termid":"MOD:01046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(37)Cl labeled 3'-chlorotyrosine","termid":"MOD:00975"}


id: GO:0031606
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proteasome core subcomplex that constitutes the two outer rings of the cytosolic proteasome core complex.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex, alpha-subunit complex","termid":"GO:0019773"},{"relation_name":"part_of","term_name":"cytosolic proteasome core complex","termid":"GO:0031603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005829","GO:0032991"],"is_obsolete":false,"name":"cytosolic proteasome core complex, alpha-subunit complex","termid":"GO:0031606"}


id: PBO:0114286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mon1-Ccz1 GEF complex subunit Ccz1","termid":"PBO:0114286"}


id: PBO:0057666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1257","termid":"PBO:0057666"}


id: PBO:0070571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 37","termid":"PBO:0070571"}


id: PBO:0091355
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear Tos4 is a marker for early S phase","termid":"PBO:0091355"}


id: PBO:0079810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glycosyltransferase family 3 member A2","termid":"PBO:0079810"}


id: MONDO:1012131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"immunoglobulin G deficiency, non-human animal","termid":"MONDO:1011727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin G deficiency, chicken","secondary_identifiers":["OMIA:000554-9031"],"termid":"MONDO:1012131","xrefs":{"Monarch":{"xref_id":"1012131"}}}


id: PR:P87121
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.05c","secondary_identifiers":["UniProtKB:P87121"],"synonyms":[{"name":"Spom972h-TAF2","type":"exact"},{"name":"TBP-associated factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87121"}


id: MONDO:0000711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyotrophic lateral sclerosis type 13 (obsolete MONDO:0000711)","termid":"MONDO:0000711","xrefs":{"Monarch":{"xref_id":"0000711"}}}


id: MONDO:0001679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete crater-like holes of optic disk (obsolete MONDO:0001679)","secondary_identifiers":["DOID:13295","ICD9:377.22"],"synonyms":[{"name":"crater-like optic disk holes","type":"exact"}],"termid":"MONDO:0001679","xrefs":{"Monarch":{"xref_id":"0001679"}}}


id: GO:0047405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a pyrimidine 5'-nucleotide = ribose-5-phosphate + a pyrimidine.","definition_xrefs":["EC:3.2.2.10","MetaCyc:3.2.2.10-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"pyrimidine-5'-nucleotide nucleosidase activity","secondary_identifiers":["RHEA:13425"],"synonyms":[{"name":"Pyr5N activity","type":"related"},{"name":"pyrimidine nucleotide N-ribosidase activity","type":"related"},{"name":"pyrimidine-5'-nucleotide phosphoribo(deoxyribo)hydrolase activity","type":"related"}],"termid":"GO:0047405"}


id: GO:0102235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-penten-3-one + NADPH + H+ = 1-pentan-3-one + NADP.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1-penten-3-one reductase activity","secondary_identifiers":["MetaCyc:RXN-12295"],"termid":"GO:0102235"}


id: MONDO:1011483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beta-mannosidosis that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-mannosidosis, non-human animal","termid":"MONDO:1011432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-mannosidosis, goat","secondary_identifiers":["OMIA:000626-9925"],"termid":"MONDO:1011483","xrefs":{"Monarch":{"xref_id":"1011483"}}}


id: GO:0050562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tRNA(Pyl) + L-lysine + ATP = L-lysyl-tRNA(Pyl) + diphosphate + AMP.","definition_xrefs":["MetaCyc:6.1.1.25-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete lysine-tRNA(Pyl) ligase activity (obsolete GO:0050562)","synonyms":[{"name":"L-lysine:tRNAPyl ligase (AMP-forming)","type":"exact"},{"name":"lysine-tRNAPyl ligase activity","type":"exact"}],"termid":"GO:0050562"}


id: PBO:0083367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified ORF KAP95/YLR347C","termid":"PBO:0083367"}


id: MONDO:0018528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital myopathy with myasthenic-like onset is a rare, genetic, non-dystrophic myopathy characterized by fatigable muscle weakness associated with congenital myopathy. Patients present with axial hypotonia, myopathic facies with fatigable ptosis, feeding difficulties, delayed gross motor development and proximal limb weakness with a RYR1-related typical pattern of muscle involvement (i.e. severe involvement of the soleus muscle and sparring of the rectus femoris, sartorius, gracilis and semitendinous muscles). Scoliosis and frequent respiratory tract infections are additional observed features.","definition_xrefs":["Orphanet:424107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RYR1-related myopathy","termid":"MONDO:0100150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy with myasthenic-like onset","secondary_identifiers":["SCTID:763315005","GARD:21783","MEDGEN:1642781","UMLS:C4706390"],"synonyms":[{"name":"congenital myopathy with myasthenic-like onset","type":"exact"}],"termid":"MONDO:0018528","xrefs":{"Monarch":{"xref_id":"0018528"}}}


id: PBO:0080066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32 pseudogene 3","termid":"PBO:0080066"}


id: GO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aerobic respiration","termid":"GO:1903715"},{"relation_name":"regulates","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of oxidative phosphorylation","synonyms":[{"name":"OXPHOS","type":"exact"}],"termid":"GO:0002082"}


id: PBO:0004686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein Git1","termid":"PBO:0004686"}


id: PBO:0036292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase Urh2 (predicted)","termid":"PBO:0036292"}


id: PBO:0077872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM4 pseudogene 3","termid":"PBO:0077872"}


id: MONDO:0032853
data:
  {"annotated_genes":["SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87207],"is_not":false,"summary":null,"term":"MONDO:0032853"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04621":null},"genotype_count":0,"is_obsolete":false,"name":"myopathy, distal, 6, adult-onset, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684760","OMIM:618655","UMLS:C5203349"],"synonyms":[{"name":"MPD6","type":"related"},{"name":"MYOPATHY, DISTAL, 6, ADULT-ONSET, AUTOSOMAL DOMINANT","type":"related"},{"name":"myopathy, distal, 6, adult onset","type":"exact"}],"termid":"MONDO:0032853","terms_by_termid":{"MONDO:0032853":null},"xrefs":{"Monarch":{"xref_id":"0032853"}}}


id: GO:0007026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of microtubule polymerization or depolymerization","termid":"GO:0031111"},{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"is_a","term_name":"negative regulation of protein depolymerization","termid":"GO:1901880"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"microtubule depolymerization","termid":"GO:0007019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"negative regulation of microtubule depolymerization","synonyms":[{"name":"down regulation of microtubule depolymerization","type":"exact"},{"name":"down-regulation of microtubule depolymerization","type":"exact"},{"name":"downregulation of microtubule depolymerization","type":"exact"},{"name":"inhibition of microtubule depolymerization","type":"narrow"},{"name":"microtubule rescue","type":"narrow"},{"name":"microtubule stabilization","type":"exact"},{"name":"negative regulation of microtubule catastrophe","type":"narrow"},{"name":"negative regulation of microtubule disassembly","type":"exact"}],"termid":"GO:0007026"}


id: PBO:0090262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L4","termid":"PBO:0090262"}


id: MONDO:0019428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare X-linked syndrome characterized by psychomotor delay, intellectual deficit, hydrocephalus, and mild facial anomalies.","definition_xrefs":["Orphanet:85335"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fried syndrome","secondary_identifiers":["MEDGEN:930803","GARD:16753","SCTID:718848000","UMLS:C4305134"],"termid":"MONDO:0019428","xrefs":{"Monarch":{"xref_id":"0019428"}}}


id: GO:0150092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates synaptic scaling. Synaptic scaling is a form of synaptic plasticity, which entails uniform adjustments in the strength of all synapses on a cell in response to prolonged changes in the electrical activity of the cell.","definition_xrefs":["PMID:16547515","GOC:aruk","PMID:14735113","GOC:bc","PMID:14630218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of synaptic scaling","synonyms":[{"name":"homeostatic synaptic scaling","type":"related"},{"name":"regulation of homeostatic synaptic scaling","type":"related"}],"termid":"GO:0150092"}


id: PBO:0029215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_cell_wall","termid":"PBO:0029215"}


id: GO:0060168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the adenosine receptor signaling pathway. The adenosine receptor pathway is the series of molecular signals generated as a consequence of an adenosine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of adenosine receptor signaling pathway","termid":"GO:0060167"},{"relation_name":"positively_regulates","term_name":"G protein-coupled adenosine receptor signaling pathway","termid":"GO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of adenosine receptor signaling pathway","synonyms":[{"name":"positive regulation of adenosine receptor signalling pathway","type":"exact"}],"termid":"GO:0060168"}


id: PBO:0043744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A2 pseudogene 2","termid":"PBO:0043744"}


id: MONDO:0005219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibrosis associated with cyst formation in the breast parenchyma.","definition_xrefs":["NCIT:C3039"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast fibrocystic disease","secondary_identifiers":["UMLS:C0016034","DOID:10354","ICD9:610.1","EFO:0003014","MEDGEN:42015","MESH:D005348"],"synonyms":[{"name":"benign breast disease","type":"exact"},{"name":"breast fibrocystic change","type":"exact"},{"name":"cystic disease of breast","type":"exact"},{"name":"cystic disease of the breast","type":"exact"},{"name":"diffuse cystic mastopathy","type":"exact"},{"name":"fibrocystic breast","type":"exact"},{"name":"fibrocystic breast changes","type":"exact"},{"name":"fibrocystic breast disease","type":"exact"},{"name":"fibrocystic change of breast","type":"exact"},{"name":"fibrocystic change of the breast","type":"exact"},{"name":"fibrocystic disease","type":"exact"},{"name":"fibrocystic disease of breast","type":"exact"},{"name":"fibrocystic disease of the breast","type":"exact"},{"name":"fibrocystic mastopathy","type":"exact"},{"name":"mammary dysplasia","type":"exact"}],"termid":"MONDO:0005219","xrefs":{"Monarch":{"xref_id":"0005219"}}}


id: GO:0007495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of cell-cell signaling between visceral mesoderm cells and endoderm cells that is involved in the differentiation of cells in the midgut.","definition_xrefs":["GOC:isa_complete","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"midgut development","termid":"GO:0007494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"visceral mesoderm-endoderm interaction involved in midgut development","synonyms":[{"name":"visceral mesoderm/endoderm interaction","type":"exact"}],"termid":"GO:0007495"}


id: MONDO:0032931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pontocerebellar hypoplasia, hypotonia, and respiratory insufficiency syndrome, neonatal lethal","secondary_identifiers":["MEDGEN:1716458","OMIM:618810","Orphanet:615954","UMLS:C5394137","DOID:0081396","GARD:18034"],"synonyms":[{"name":"Chromosome 1P36.33 Deletion Syndrome, Atad3 Gene Cluster, Autosomal Recessive","type":"related"},{"name":"PHRINL","type":"related"},{"name":"PONTOCEREBELLAR HYPOPLASIA, HYPOTONIA, AND RESPIRATORY INSUFFICIENCY SYNDROME, NEONATAL LETHAL","type":"related"},{"name":"Phrinl Syndrome","type":"related"},{"name":"fatal pontocerebellar hypoplasia-hypotonia-respiratory distress syndrome","type":"exact"},{"name":"fatal pontocerebellar hypoplasia-hypotonia-respiratory insufficiency syndrome","type":"exact"}],"termid":"MONDO:0032931","xrefs":{"Monarch":{"xref_id":"0032931"}}}


id: MONDO:0004171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital epulis (obsolete MONDO:0004171)","termid":"MONDO:0004171","xrefs":{"Monarch":{"xref_id":"0004171"}}}


id: GO:0110071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The base of the cellularization invagination or cleavage furrow most distal to the original multi-nucleate cell or syncytium plasma membrane.","definition_xrefs":["PMID:27226317","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cellularization cleavage furrow","termid":"GO:0110070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cellularization cleavage furrow invagination front","termid":"GO:0110071"}


id: MONDO:0001034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal ulcer","termid":"MONDO:0004577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"marginal corneal ulcer","secondary_identifiers":["MEDGEN:509765","UMLS:C0155067","DOID:10441","icd11.foundation:2035123281","SCTID:47398006","ICD9:370.01"],"termid":"MONDO:0001034","xrefs":{"Monarch":{"xref_id":"0001034"}}}


id: PBO:0055749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA negative regulator of antiviral signaling","termid":"PBO:0055749"}


id: PBO:0112881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial alpha-ketoglutarate dehydrogenase adaptor subunit Ymr31/Kgd4","termid":"PBO:0112881"}


id: PBO:0028071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_aseptate_mononucleate_vegetative_cell","termid":"PBO:0028071"}


id: PBO:0083867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein and component of SCF ubiquitin ligase complexes; involved in ubiquitin-dependent protein catabolism; readily monoubiquitinated in vitro by SCF-Ubc4 complexes; SCF-Ucc1 regulates level of Cit2 citrate synthase protein to maintain citrate homeostasis, acts as metabolic switch for glyoxylate cycle; UCC1 transcription is downregulated in cells grown on C2-compounds","termid":"PBO:0083867"}


id: PBO:0073708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI like proto-oncogene","termid":"PBO:0073708"}


id: PBO:0048854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A1","termid":"PBO:0048854"}


id: GO:0007253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The selective interaction of the transcription factor NF-kappaB with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic sequestering of NF-kappaB (obsolete GO:0007253)","synonyms":[{"name":"cytoplasmic NF-kappaB retention","type":"exact"},{"name":"cytoplasmic NF-kappaB sequestration","type":"exact"},{"name":"cytoplasmic NF-kappaB storage","type":"exact"},{"name":"cytoplasmic retention of NF-kappaB","type":"exact"},{"name":"cytoplasmic sequestration of NF-kappaB","type":"exact"},{"name":"cytoplasmic storage of NF-kappaB","type":"exact"},{"name":"maintenance of NF-kappaB location in cytoplasm","type":"exact"}],"termid":"GO:0007253"}


id: PBO:0042950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 4","termid":"PBO:0042950"}


id: PBO:0001518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1 domain","termid":"PBO:0001518"}


id: PBO:0000378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF221 family protein implicated in Golgi to plasma membrane transport (predicted)","termid":"PBO:0000378"}


id: PBO:0072359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 45","termid":"PBO:0072359"}


id: SO:0001262
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A continous experimental result region extending the length of multiple overlapping EST's.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"EST","termid":"SO:0000345"},{"relation_name":"is_a","term_name":"overlapping_feature_set","termid":"SO:0001261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlapping_EST_set","synonyms":[{"name":"overlapping EST set","type":"exact"}],"termid":"SO:0001262"}


id: MONDO:0001529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A finding of low numbers of red and white blood cells and platelets in the peripheral blood.","definition_xrefs":["NCIT:C34889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"pancytopenia","secondary_identifiers":["ICD9:284.1","ICD9:284.89","DOID:12450","MEDGEN:18281","MESH:D010198","SCTID:127034005","UMLS:C0030312"],"termid":"MONDO:0001529","xrefs":{"Monarch":{"xref_id":"0001529"}}}


id: GO:0030805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide catabolic process","termid":"GO:0030811"},{"relation_name":"regulates","term_name":"cyclic nucleotide catabolic process","termid":"GO:0009214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"regulation of cyclic nucleotide catabolic process","synonyms":[{"name":"regulation of cyclic nucleotide breakdown","type":"exact"},{"name":"regulation of cyclic nucleotide catabolism","type":"exact"},{"name":"regulation of cyclic nucleotide degradation","type":"exact"}],"termid":"GO:0030805"}


id: GO:0032781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate of an ATP-dependent activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"},{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ATP-dependent activity","synonyms":[{"name":"activation of ATPase activity","type":"narrow"},{"name":"positive regulation of ATPase activity","type":"exact"},{"name":"positive regulation of adenosinetriphosphatase activity","type":"exact"},{"name":"stimulation of ATPase activity","type":"narrow"},{"name":"up regulation of ATPase activity","type":"exact"},{"name":"up-regulation of ATPase activity","type":"exact"},{"name":"upregulation of ATPase activity","type":"exact"}],"termid":"GO:0032781"}


id: GO:2001130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a trimethylamine.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"methane biosynthetic process from trimethylamine","termid":"GO:2001130"}


id: SO:0000253
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Transfer RNA (tRNA) molecules are approximately 80 nucleotides in length. Their secondary structure includes four short double-helical elements and three loops (D, anti-codon, and T loops). Further hydrogen bonds mediate the characteristic L-shaped molecular structure. Transfer RNAs have two regions of fundamental functional importance: the anti-codon, which is responsible for specific mRNA codon recognition, and the 3' end, to which the tRNA's corresponding amino acid is attached (by aminoacyl-tRNA synthetases). Transfer RNAs cope with the degeneracy of the genetic code in two manners: having more than one tRNA (with a specific anti-codon) for a particular amino acid; and 'wobble' base-pairing, i.e. permitting non-standard base-pairing at the 3rd anti-codon position.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tRNA_primary_transcript","termid":"SO:0000210"},{"relation_name":"is_a","term_name":"sncRNA","termid":"SO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/TRNA"],"synonyms":[{"name":"INSDC_feature:tRNA","type":"exact"},{"name":"INSDC_qualifier:unknown","type":"broad"},{"name":"transfer RNA","type":"related"},{"name":"transfer ribonucleic acid","type":"related"}],"termid":"SO:0000253"}


id: GO:0005742
data:
  {"annotated_genes":["SJAG_03358","SJAG_01780","SJAG_04996","SJAG_03416","SJAG_01951","SJAG_03415","SJAG_05259","SJAG_03502","SJAG_00569","SJAG_02361","SJAG_03515","SJAG_02355"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63850,70837,79487,91234,99748,106493],"is_not":false,"summary":null,"term":"GO:0005742"},{"annotations":[110715,112099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140595"},{"annotations":[73742,90710,62061,70315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001401"}]},"cv_name":"cellular_component","definition":"A large complex of the mitochondrial outer membrane that mediates transport of proteins into all mitochondrial compartments.","definition_xrefs":["PMID:12581629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer mitochondrial membrane protein complex","termid":"GO:0098799"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00569":null,"SJAG_01780":null,"SJAG_01951":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mitochondrial outer membrane translocase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"GIP complex","type":"narrow"},{"name":"mitochondrion outer membrane translocase complex","type":"exact"}],"termid":"GO:0005742","terms_by_termid":{"GO:0001401":null,"GO:0005742":null,"GO:0140595":null}}


id: PBO:0060514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethylmaleimide-sensitive factor attachment protein, gamma pseudogene 2","termid":"PBO:0060514"}


id: GO:0009865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the pollen tube adheres to cells of the stigma and style.","definition_xrefs":["GOC:tair_curators","PMID:12602877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"},{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"pollen-pistil interaction","termid":"GO:0009875"},{"relation_name":"part_of","term_name":"pollen tube development","termid":"GO:0048868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"pollen tube adhesion","termid":"GO:0009865"}


id: MONDO:1010262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, non-human animal","secondary_identifiers":["OMIA:000807"],"termid":"MONDO:1010262","xrefs":{"Monarch":{"xref_id":"1010262"}}}


id: PBO:0055948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 57","termid":"PBO:0055948"}


id: GO:0018050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-threonine amide by hydrolysis and oxidation of an interior Thr-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0097"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-threonine amidation (obsolete GO:0018050)","termid":"GO:0018050"}


id: GO:0061550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cranial ganglion over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion development","termid":"GO:0061548"},{"relation_name":"part_of","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion development","synonyms":[{"name":"cranial ganglia development","type":"related"}],"termid":"GO:0061550"}


id: GO:0030305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of heparan sulfate; can degrade both heparan sulfate and heparin glycosaminoglycan chains.","definition_xrefs":["PMID:10916150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"heparanase activity","secondary_identifiers":["Reactome:R-HSA-1667005"],"synonyms":[{"name":"heparinase activity","type":"related"}],"termid":"GO:0030305"}


id: GO:0004372
data:
  {"annotated_genes":["SJAG_03914","SJAG_01766"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72499,73739],"is_not":false,"summary":null,"term":"GO:0004372"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine.","definition_xrefs":["RHEA:15481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01766":null,"SJAG_03914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"glycine hydroxymethyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5694137","EC:2.1.2.1","MetaCyc:GLYOHMETRANS-RXN"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:glycine hydroxymethyltransferase activity","type":"related"},{"name":"L-serine hydroxymethyltransferase activity","type":"related"},{"name":"allothreonine aldolase activity","type":"related"},{"name":"serine aldolase activity","type":"related"},{"name":"serine hydroxymethylase activity","type":"related"},{"name":"serine hydroxymethyltransferase activity","type":"related"},{"name":"serine transhydroxymethylase activity","type":"related"}],"termid":"GO:0004372","terms_by_termid":{"GO:0004372":null}}


id: MONDO:0975798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic aciduria and homocystinuria","termid":"MONDO:0016826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005066","MONDO:0002280","MONDO:0004736"],"is_obsolete":false,"name":"methylmalonic aciduria and homocystinuria, cb1L type","secondary_identifiers":["OMIM:620940"],"termid":"MONDO:0975798","xrefs":{"Monarch":{"xref_id":"0975798"}}}


id: PBO:0065005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 10","termid":"PBO:0065005"}


id: MONDO:0035737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"factor V deficiency","termid":"MONDO:0020586"},{"relation_name":"is_a","term_name":"acquired coagulation factor deficiency","termid":"MONDO:0020599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired factor V deficiency","secondary_identifiers":["UMLS:C4329256","icd11.foundation:99894028","MEDGEN:1380582","Orphanet:599490","GARD:22408","NCIT:C131624"],"termid":"MONDO:0035737","xrefs":{"Monarch":{"xref_id":"0035737"}}}


id: MONDO:0005036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the stomach","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastric adenocarcinoma","secondary_identifiers":["DOID:3717","MEDGEN:82961","ONCOTREE:STAD","Orphanet:464463","EFO:0000503","NCIT:C4004","UMLS:C0278701","SCTID:408647009"],"synonyms":[{"name":"STAD","type":"related"},{"name":"adenocarcinoma - stomach","type":"exact"},{"name":"adenocarcinoma of stomach","type":"exact"},{"name":"adenocarcinoma of the stomach","type":"exact"},{"name":"gastric (stomach) adenocarcinoma","type":"exact"},{"name":"gastric adenocarcinoma","type":"exact"},{"name":"stomach adenocarcinoma","type":"exact"}],"termid":"MONDO:0005036","xrefs":{"Monarch":{"xref_id":"0005036"}}}


id: GO:0016105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of triterpenoid compounds, terpenoids with six isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid metabolic process","termid":"GO:0006722"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"triterpenoid catabolic process","synonyms":[{"name":"triterpene catabolic process","type":"narrow"},{"name":"triterpene catabolism","type":"narrow"},{"name":"triterpenoid breakdown","type":"exact"},{"name":"triterpenoid catabolism","type":"exact"},{"name":"triterpenoid degradation","type":"exact"}],"termid":"GO:0016105"}


id: GO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete apelin-like receptor (obsolete GO:0001597)","synonyms":[{"name":"APJ-like receptor","type":"exact"},{"name":"apelin-like receptor","type":"exact"}],"termid":"GO:0001597"}


id: FYPO:0003348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the substrate specificity of a gene product that executes glutathione synthetase activity in wild type is altered such that the gene product executes homoglutathione synthetase activity.","definition_xrefs":["PMID:23091597","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered substrate specificity","termid":"FYPO:0003347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"altered substrate specificity, glutathione synthetase to homoglutathione synthetase activity","synonyms":[{"name":"abnormal catalytic activity, altered substrate specificity, glutathione synthetase to homoglutathione synthetase activity","type":"exact"}],"termid":"FYPO:0003348"}


id: GO:0003937
data:
  {"annotated_genes":["SJAG_04681"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70285],"is_not":false,"summary":null,"term":"GO:0003937"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: IMP + H2O = 5-formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide.","definition_xrefs":["EC:3.5.4.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclohydrolase activity","termid":"GO:0019238"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"IMP cyclohydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-73797","RHEA:18445","MetaCyc:IMPCYCLOHYDROLASE-RXN"],"synonyms":[{"name":"IMP 1,2-hydrolase (decyclizing)","type":"related"},{"name":"IMP synthetase activity","type":"related"},{"name":"inosinate cyclohydrolase activity","type":"related"},{"name":"inosinicase activity","type":"related"}],"termid":"GO:0003937","terms_by_termid":{"GO:0003937":null}}


id: GO:0034576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-isopropylacetanilide + OH- = N-isopropylaniline + acetate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N-isopropylacetanilide amidohydrolase activity (obsolete GO:0034576)","termid":"GO:0034576"}


id: PBO:0089970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-phosphoerythronate phosphastase/2-phosphoglycolate phophatase, involved in detoxification of glycolytic by-products","termid":"PBO:0089970"}


id: PBO:0045813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 3","termid":"PBO:0045813"}


id: GO:1904465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of matrix metallopeptidase secretion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:8679543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of matrix metallopeptidase secretion","termid":"GO:1904464"},{"relation_name":"negatively_regulates","term_name":"matrix metallopeptidase secretion","termid":"GO:1990773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of matrix metallopeptidase secretion","synonyms":[{"name":"down regulation of MMP secretion","type":"exact"},{"name":"down regulation of matrix metallopeptidase secretion","type":"exact"},{"name":"down regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"down-regulation of MMP secretion","type":"exact"},{"name":"down-regulation of matrix metallopeptidase secretion","type":"exact"},{"name":"down-regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"downregulation of MMP secretion","type":"exact"},{"name":"downregulation of matrix metallopeptidase secretion","type":"exact"},{"name":"downregulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"inhibition of MMP secretion","type":"narrow"},{"name":"inhibition of matrix metallopeptidase secretion","type":"narrow"},{"name":"inhibition of matrix metalloproteinase secretion","type":"narrow"},{"name":"negative regulation of MMP secretion","type":"exact"},{"name":"negative regulation of matrix metalloproteinase secretion","type":"narrow"}],"termid":"GO:1904465"}


id: PBO:0065609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 3","termid":"PBO:0065609"}


id: GO:0006228
data:
  {"annotated_genes":["SJAG_02887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64616],"is_not":false,"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate biosynthetic process","termid":"GO:0009209"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"UTP metabolic process","termid":"GO:0046051"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"UTP biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"UTP anabolism","type":"exact"},{"name":"UTP biosynthesis","type":"exact"},{"name":"UTP formation","type":"exact"},{"name":"UTP synthesis","type":"exact"}],"termid":"GO:0006228","terms_by_termid":{"GO:0006228":null}}


id: PBO:0039407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 10 pseudogene 1","termid":"PBO:0039407"}


id: GO:0051353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"},{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oxidoreductase activity","secondary_identifiers":["GO:0009391"],"synonyms":[{"name":"activation of oxidoreductase activity","type":"narrow"},{"name":"oxidoreductase activator","type":"exact"},{"name":"ribonucleotide reductase activating enzyme activity","type":"narrow"},{"name":"stimulation of oxidoreductase activity","type":"narrow"},{"name":"up regulation of oxidoreductase activity","type":"exact"},{"name":"up-regulation of oxidoreductase activity","type":"exact"},{"name":"upregulation of oxidoreductase activity","type":"exact"}],"termid":"GO:0051353"}


id: PR:O00087
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydrolipoyl dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00743","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoyl dehydrogenase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.09c","secondary_identifiers":["UniProtKB:O00087"],"synonyms":[{"name":"DLDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DLD","type":"exact"},{"name":"dihydrolipoamide dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O00087"}


id: PBO:0090466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Ste11","termid":"PBO:0090466"}


id: PBO:0061860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodendrocyte transcription factor 1","termid":"PBO:0061860"}


id: PBO:0056735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm specific transcript pseudogene 4","termid":"PBO:0056735"}


id: PBO:0108589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 13B","termid":"PBO:0108589"}


id: PBO:0113040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone for eEF1A; ribosome-associated chaperone dedicated to facilitating high-level expression of eEF1A; transiently binds nascent GTPase domain of eEF1A as soon as it emerges from ribosome tunnel; forms complex with NAC by binding UBA domain of Egd2p; inactivation results in disturbed proteostasis and Hsf1p activation due to abberant eEF1A biogenesis; overlapping phenotypes support notion that Chp1p functions in same eEF1A biogenesis pathway as chaperone Zpr1p-Aim29p","termid":"PBO:0113040"}


id: PBO:0042878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 161","termid":"PBO:0042878"}


id: PBO:0058042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4263","termid":"PBO:0058042"}


id: PBO:0070147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 61 pseudogene","termid":"PBO:0070147"}


id: GO:1901425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a formic acid stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to formic acid","termid":"GO:1901425"}


id: PBO:0067766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 66","termid":"PBO:0067766"}


id: FYPO:0003546
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA damage measured in a cell is greater than normal. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased DNA damage","synonyms":[{"name":"increased number of DNA lesions","type":"related"},{"name":"increased spontaneous DNA lesions","type":"related"}],"termid":"FYPO:0003546"}


id: GO:0021916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Short range signaling between cells of the paraxial mesoderm and motor neuron precursors in the spinal cord that specifies the fate of the motor column neuron precursors along the anterior-posterior axis.","definition_xrefs":["PMID:11262869","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inductive cell-cell signaling","termid":"GO:0031129"},{"relation_name":"part_of","term_name":"somatic motor neuron fate commitment","termid":"GO:0021917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inductive cell-cell signaling between paraxial mesoderm and motor neuron precursors","synonyms":[{"name":"inductive cell-cell signalling between paraxial mesoderm and motor neuron precursors","type":"exact"}],"termid":"GO:0021916"}


id: PBO:0064640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphopantothenoylcysteine decarboxylase","termid":"PBO:0064640"}


id: GO:0060818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on the paternal X-chromosome in the XX sex by genomic imprinting.","definition_xrefs":["GOC:dph","GOC:tb","PMID:11743158","PMID:23578369","PMID:16789828","PMID:18425126","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dosage compensation by inactivation of X chromosome","termid":"GO:0009048"},{"relation_name":"is_a","term_name":"genomic imprinting","termid":"GO:0071514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"inactivation of paternal X chromosome by genomic imprinting","synonyms":[{"name":"iXCI","type":"related"},{"name":"inactivation of paternal X chromosome by genetic imprinting","type":"related"}],"termid":"GO:0060818"}


id: PBO:0081079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 11","termid":"PBO:0081079"}


id: GO:0061726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disaggregation of a mitochondrion into its constituent components.","definition_xrefs":["GOC:autophagy","PMID:25009776"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrion disassembly (obsolete GO:0061726)","synonyms":[{"name":"mitochondrion degradation","type":"exact"}],"termid":"GO:0061726"}


id: PBO:0054909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2323","termid":"PBO:0054909"}


id: MONDO:0005912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The misuse of phencyclidine with associated psychological symptoms and impairment in social or occupational functioning.","definition_xrefs":["MESH:D010623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance abuse","termid":"MONDO:0002491"},{"relation_name":"is_a","term_name":"drug dependence","termid":"MONDO:0005303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phencyclidine abuse","secondary_identifiers":["SCTID:7071007","UMLS:C0031391","DOID:5062","ICD9:305.90","MEDGEN:19234"],"synonyms":[{"name":"PCP abuse","type":"exact"},{"name":"phencyclidine abuse","type":"exact"}],"termid":"MONDO:0005912","xrefs":{"Monarch":{"xref_id":"0005912"}}}


id: PBO:0000123
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during meiosis","termid":"PBO:0000123"}


id: FYPO:0003465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is lower than normal during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal alpha,alpha-trehalase activity","termid":"FYPO:0001479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased alpha,alpha-trehalase activity during cellular response to salt stress","synonyms":[{"name":"decreased neutral trehalase activity during cellular response to salt stress","type":"exact"},{"name":"decreased trehalase activity during cellular response to salt stress","type":"broad"},{"name":"reduced alpha,alpha-trehalase activity during cellular response to v","type":"exact"}],"termid":"FYPO:0003465"}


id: GO:0032723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"positively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045422"],"synonyms":[{"name":"activation of connective tissue growth factor production","type":"narrow"},{"name":"positive regulation of CCN2 production","type":"exact"},{"name":"positive regulation of CTGF production","type":"exact"},{"name":"positive regulation of Fisp12 production","type":"exact"},{"name":"positive regulation of Hcs24 production","type":"exact"},{"name":"positive regulation of IGFBP8 production","type":"exact"},{"name":"positive regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"positive regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"},{"name":"stimulation of connective tissue growth factor production","type":"narrow"},{"name":"up regulation of connective tissue growth factor production","type":"exact"},{"name":"up-regulation of connective tissue growth factor production","type":"exact"},{"name":"upregulation of connective tissue growth factor production","type":"exact"}],"termid":"GO:0032723"}


id: GO:1904426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of GTP binding.","definition_xrefs":["PMID:21454546","GO_REF:0000059","PMID:19066305","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of binding","termid":"GO:0051099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of GTP binding","synonyms":[{"name":"activation of GTP binding","type":"narrow"},{"name":"up regulation of GTP binding","type":"exact"},{"name":"up-regulation of GTP binding","type":"exact"},{"name":"upregulation of GTP binding","type":"exact"}],"termid":"GO:1904426"}


id: GO:0140383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxytryptamine + ATP = 4-hydoxytryptamine 4-phosphate + ADP + H+.","definition_xrefs":["PMID:28763571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"4-hydroxytryptamine kinase activity","secondary_identifiers":["RHEA:55564","EC:2.7.1.222"],"termid":"GO:0140383"}


id: PBO:0110323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 2 (JR blood group)","termid":"PBO:0110323"}


id: MONDO:1011147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achondroplasia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"achondroplasia, non-human animal","termid":"MONDO:1010291"},{"relation_name":"is_a","term_name":"osteochondrodysplasia, dog","termid":"MONDO:1011194"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achondroplasia, dog","secondary_identifiers":["OMIA:000004-9615"],"termid":"MONDO:1011147","xrefs":{"Monarch":{"xref_id":"1011147"}}}


id: PBO:0090900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane basic amino acid transmembrane transporter","termid":"PBO:0090900"}


id: PBO:0065429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 2","termid":"PBO:0065429"}


id: MONDO:0018156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 3","termid":"MONDO:0016902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3q26q27 microdeletion syndrome","secondary_identifiers":["Orphanet:356947","MEDGEN:1668723","GARD:21534","UMLS:C4755255"],"synonyms":[{"name":"3q26-q27microdeletion syndrome","type":"exact"},{"name":"Del(3)(q26q27)","type":"exact"},{"name":"monosomy 3q26-q27","type":"exact"},{"name":"monosomy 3q26q27","type":"exact"}],"termid":"MONDO:0018156","xrefs":{"Monarch":{"xref_id":"0018156"}}}


id: PBO:0082417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional enzyme of 'de novo' purine nucleotide pathway; contains both phosphoribosylglycinamidine synthetase/glycinamide ribotide synthetase (EC 6.3.4.13) [\"Ade5\"] and phosphoribosylaminoimidazole synthetase/aminoimidazole ribotide synthetase (EC 6.3.3.1) [\"Ade7\"] activities","termid":"PBO:0082417"}


id: PBO:0074732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 90","termid":"PBO:0074732"}


id: PBO:0080016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 2","termid":"PBO:0080016"}


id: FYPO:0004813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II at tRNA genes (tDNA) is abnormal.","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal termination of RNA polymerase II transcription","termid":"FYPO:0004811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0000294"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase II transcription at tDNA","synonyms":[{"name":"abnormal RNA polymerase II release at tDNA","type":"related"},{"name":"abnormal RNA polymerase II transcription termination at tDNA","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription at tDNA during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase II transcription at tDNA during vegetative growth","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription at transfer RNA genes","type":"related"}],"termid":"FYPO:0004813"}


id: MONDO:0005019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of systemic scleroderma characterized by sclerosis of the skin, Raynaud phenomenon, and organ involvement, including pulmonary fibrosis, renal disease, and gastrointestinal tract involvement.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic sclerosis","termid":"MONDO:0005100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"diffuse scleroderma","secondary_identifiers":["NCIT:C116791","MESH:D045743","UMLS:C1258104","DOID:1580","GARD:7727","EFO:0000404","MEDGEN:219839"],"synonyms":[{"name":"diffuse systemic sclerosis","type":"exact"},{"name":"systemic sclerosis, diffuse","type":"exact"}],"termid":"MONDO:0005019","xrefs":{"Monarch":{"xref_id":"0005019"}}}


id: GO:0014725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extraocular skeletal muscle development. Extraocular skeletal muscle development is the process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue development","termid":"GO:0048641"},{"relation_name":"regulates","term_name":"extraocular skeletal muscle development","termid":"GO:0002074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of extraocular skeletal muscle development","termid":"GO:0014725"}


id: GO:0032105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of a response to an extracellular stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of response to extracellular stimulus (obsolete GO:0032105)","synonyms":[{"name":"down regulation of response to extracellular stimulus","type":"exact"},{"name":"down-regulation of response to extracellular stimulus","type":"exact"},{"name":"downregulation of response to extracellular stimulus","type":"exact"},{"name":"inhibition of response to extracellular stimulus","type":"narrow"}],"termid":"GO:0032105"}


id: GO:2001101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltopentaoseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentasaccharide transport","termid":"GO:2001100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"maltopentaose transport","termid":"GO:2001101"}


id: GO:0008754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a lipid-linked O antigen + a lipid A-core oligosaccharide = a lipopolysaccharide + a polyisoprenyl diphosphate.","definition_xrefs":["EC:2.4.99.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"O-antigen ligase activity","secondary_identifiers":["MetaCyc:RXN-13611"],"termid":"GO:0008754"}


id: PBO:0079004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 4-1","termid":"PBO:0079004"}


id: PBO:0077057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 4","termid":"PBO:0077057"}


id: GO:1903372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endoplasmic reticulum tubular network organization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:als","PMID:24891604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum tubular network organization","termid":"GO:1903371"},{"relation_name":"negatively_regulates","term_name":"endoplasmic reticulum tubular network organization","termid":"GO:0071786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endoplasmic reticulum tubular network organization","synonyms":[{"name":"down regulation of ER tubular network organisation","type":"exact"},{"name":"down regulation of ER tubular network organization","type":"exact"},{"name":"down regulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"down regulation of endoplasmic reticulum tubular network organization","type":"exact"},{"name":"down-regulation of ER tubular network organisation","type":"exact"},{"name":"down-regulation of ER tubular network organization","type":"exact"},{"name":"down-regulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"down-regulation of endoplasmic reticulum tubular network organization","type":"exact"},{"name":"downregulation of ER tubular network organisation","type":"exact"},{"name":"downregulation of ER tubular network organization","type":"exact"},{"name":"downregulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"downregulation of endoplasmic reticulum tubular network organization","type":"exact"},{"name":"inhibition of ER tubular network organisation","type":"narrow"},{"name":"inhibition of ER tubular network organization","type":"narrow"},{"name":"inhibition of endoplasmic reticulum tubular network organisation","type":"narrow"},{"name":"inhibition of endoplasmic reticulum tubular network organization","type":"narrow"},{"name":"negative regulation of ER tubular network organisation","type":"exact"},{"name":"negative regulation of ER tubular network organization","type":"exact"},{"name":"negative regulation of endoplasmic reticulum tubular network organisation","type":"exact"}],"termid":"GO:1903372"}


id: GO:0043810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-hydroxyacyl-[acyl-carrier protein] + L-ornithine = lyso-ornithine lipid + [acyl-carrier protein]. The enzyme, found in bacteria, catalyzes the first step in the biosynthesis of ornithine lipids.","definition_xrefs":["PMID:15341653","RHEA:20633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"ornithine-acyl [acyl carrier protein] N-acyltransferase activity","secondary_identifiers":["EC:2.3.2.30"],"synonyms":[{"name":"L-ornithine N(alpha)-acyltransferase","type":"exact"},{"name":"ornithine-acyl[acyl carrier protein] N-acyltransferase activity","type":"exact"}],"termid":"GO:0043810"}


id: GO:0044160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pigmented membrane of any host thylakoid.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host thylakoid","termid":"GO:0044159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host thylakoid membrane","termid":"GO:0044160"}


id: GO:0003411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another and contributes to the physical shaping or formation of the camera-type eye.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility involved in camera-type eye morphogenesis","termid":"GO:0003411"}


id: PBO:0059109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORN repeat containing 5","termid":"PBO:0059109"}


id: PBO:0001012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc transferase associated protein Alg14 (predicted)","termid":"PBO:0001012"}


id: GO:0035282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that divides an organism or part of an organism into a series of semi-repetitive parts, or segments, often arranged along a longitudinal axis.","definition_xrefs":["PMID:10611687","PMID:9706689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"segmentation","secondary_identifiers":["Wikipedia:Segmentation_(biology)"],"termid":"GO:0035282"}


id: PBO:0039860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 24","termid":"PBO:0039860"}


id: GO:0102771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-(1,2-saturated acyl)sphinganine + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an N-[(2'R)-hydroxyacyl]sphinganine + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["RHEA:46512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid 2-hydroxylase activity","termid":"GO:0080132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dihydroceramide fatty acyl 2-hydroxylase activity","secondary_identifiers":["EC:1.14.18.7","MetaCyc:RXN-7796"],"synonyms":[{"name":"plant sphingolipid fatty acid 2-hydroxylase actitivy","type":"exact"},{"name":"sphingolipid very long chain fatty acid alpha-hydroxylase activity","type":"related"}],"termid":"GO:0102771"}


id: PBO:0041686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin related polypeptide alpha","termid":"PBO:0041686"}


id: MONDO:0006766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Impaired ambulation not attributed to sensory impairment or motor weakness. frontal lobe disorders; basal ganglia diseases (e.g., parkinsonian disorders); dementia, multi-infarct; alzheimer disease; and other conditions may be associated with gait apraxia.","definition_xrefs":["MESH:D020235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apraxia","termid":"MONDO:0000665"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gait apraxia","secondary_identifiers":["MedDRA:10070635","UMLS:C1510417","MEDGEN:266930","DOID:4260"],"synonyms":[{"name":"Gait apraxia (finding)","type":"exact"}],"termid":"MONDO:0006766","xrefs":{"Monarch":{"xref_id":"0006766"}}}


id: GO:0071075
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the eukaryotic translation initiation factor 2 complex (EIF2), CUG binding protein 1, and several endoplasmic reticulum proteins; the complex is involved in the regulation of translation.","definition_xrefs":["PMID:16931514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"CUGBP1-eIF2 complex","termid":"GO:0071075"}


id: PBO:0044112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated transcript 75","termid":"PBO:0044112"}


id: PBO:0079277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TELO2 interacting protein 1","termid":"PBO:0079277"}


id: GO:0035265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function.","definition_xrefs":["GOC:bf","ISBN:0721662544","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organ growth","termid":"GO:0035265"}


id: MONDO:0037737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, usually benign fibroblastic neoplasm that arises from the peritoneum. It is characterized by the presence of prominent hemangiopericytoma-like vessels.","definition_xrefs":["NCIT:C126357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal neoplasm","termid":"MONDO:0006901"},{"relation_name":"is_a","term_name":"solitary fibrous tumor","termid":"MONDO:0016238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peritoneal solitary fibrous tumor","secondary_identifiers":["UMLS:C4288403","MEDGEN:925935"],"synonyms":[{"name":"peritoneal solitary fibrous tumor","type":"exact"}],"termid":"MONDO:0037737","xrefs":{"Monarch":{"xref_id":"0037737"}}}


id: GO:1904924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mitophagy in response to mitochondrial depolarization.","definition_xrefs":["PMID:22020285"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mitophagy in response to mitochondrial depolarization (obsolete GO:1904924)","termid":"GO:1904924"}


id: GO:0046017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase I promoter during mitotic cell cycle (obsolete GO:0046017)","synonyms":[{"name":"mitotic regulation of transcription from Pol I promoter","type":"exact"},{"name":"regulation of transcription from Pol I promoter during mitosis","type":"exact"},{"name":"regulation of transcription from RNA polymerase I promoter during mitosis","type":"exact"}],"termid":"GO:0046017"}


id: GO:0010487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methioninamine + spermidine = S-methyl-5'-thioadenosine + thermospermine + H+.","definition_xrefs":["PMID:17560575","EC:2.5.1.79","MetaCyc:RXN-11190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"thermospermine synthase activity","secondary_identifiers":["RHEA:30515"],"termid":"GO:0010487"}


id: PBO:0047685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin leucine rich transmembrane protein 2","termid":"PBO:0047685"}


id: MONDO:0001305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of the laryngeal airway.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngostenosis","secondary_identifiers":["ICD10CM:J38.6","MEDGEN:7274","DOID:11527","ICD9:478.74","MESH:D007829","HP:0001602","SCTID:75547007","UMLS:C0023075"],"synonyms":[{"name":"stenosis of larynx","type":"exact"}],"termid":"MONDO:0001305","xrefs":{"Monarch":{"xref_id":"0001305"}}}


id: PBO:0018043
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POlyPloidy","termid":"PBO:0018043"}


id: GO:0048896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a glial cell along the axons in a lateral line nerve.","definition_xrefs":["PMID:12062041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell migration","termid":"GO:0008347"},{"relation_name":"part_of","term_name":"lateral line nerve development","termid":"GO:0048892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve glial cell migration","synonyms":[{"name":"glial cell migration in lateral line nerve","type":"exact"}],"termid":"GO:0048896"}


id: MONDO:1011838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital copper deficiency, non-human animal","secondary_identifiers":["OMIA:000226"],"termid":"MONDO:1011838","xrefs":{"Monarch":{"xref_id":"1011838"}}}


id: FYPO:0008152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of transcribed  cryptic unstable trancripts (CUTs) measured in a cell is  normal  (i.e. indistinguishable from wild type).  Total CUT RNA or a CUT transcribed from a specific locus may be affected.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal CUT RNA level","termid":"FYPO:0008152"}


id: GO:0035576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that results in regions of the embryo being delineated into the area in which the pronephric kidney will develop.","definition_xrefs":["GOC:bf","PMID:16979153","PMID:19909807"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in pronephric field specification (obsolete GO:0035576)","synonyms":[{"name":"retinoic acid receptor signalling pathway involved in pronephric field specification","type":"exact"}],"termid":"GO:0035576"}


id: PBO:0048182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated binding protein 3","termid":"PBO:0048182"}


id: PBO:0088898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus9","termid":"PBO:0088898"}


id: GO:1905649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of shell calcification.","definition_xrefs":["PMID:14648763","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biomineral tissue development","termid":"GO:0070168"},{"relation_name":"is_a","term_name":"regulation of shell calcification","termid":"GO:1905648"},{"relation_name":"negatively_regulates","term_name":"shell calcification","termid":"GO:0031215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of shell calcification","synonyms":[{"name":"down regulation of shell calcification","type":"exact"},{"name":"down-regulation of shell calcification","type":"exact"},{"name":"downregulation of shell calcification","type":"exact"},{"name":"inhibition of shell calcification","type":"narrow"}],"termid":"GO:1905649"}


id: PBO:0055353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2782","termid":"PBO:0055353"}


id: MONDO:0015499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete paralytic facial malformation (obsolete MONDO:0015499)","secondary_identifiers":["Orphanet:156224"],"termid":"MONDO:0015499","xrefs":{"Monarch":{"xref_id":"0015499"}}}


id: PBO:0072454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 18","termid":"PBO:0072454"}


id: PBO:0086346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P subunit of the mitochondrial glycine decarboxylase complex; glycine decarboxylase is required for the catabolism of glycine to 5,10-methylene-THF; expression is regulated by levels of 5,10-methylene-THF in the cytoplasm","termid":"PBO:0086346"}


id: PBO:0084374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Long-chain base-1-phosphate phosphatase; specific for dihydrosphingosine-1-phosphate, regulates ceramide and long-chain base phosphates levels, involved in incorporation of exogenous long chain bases in sphingolipids; LCB3 has a paralog, YSR3, that arose from the whole genome duplication","termid":"PBO:0084374"}


id: MONDO:0015289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infectious epithelial keratitis is a rare, potentially sight-threatening, acquired ocular disease chracterized by corneal epithelium inflammation resulting from viral (mainly Herpes Simplex virus), bacterial, fungic or protist infection, manifesting with variable symptoms, such as conjunctival hyperemia, lacrimation, rapid onset of pain, blurred vision and/or photophobia, depending on the causative agent.","definition_xrefs":["Orphanet:137593"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"herpes simplex virus keratitis","termid":"MONDO:0015288"},{"relation_name":"is_a","term_name":"viral eye infection","termid":"MONDO:0020950"},{"relation_name":"is_a","term_name":"corneal infection","termid":"MONDO:0023865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"infectious epithelial keratitis","secondary_identifiers":["UMLS:C4749790","MEDGEN:1660649","icd11.foundation:2103923676","GARD:19877"],"termid":"MONDO:0015289","xrefs":{"Monarch":{"xref_id":"0015289"}}}


id: GO:0015631
data:
  {"annotated_genes":["SJAG_02040","SJAG_00042","SJAG_00773","SJAG_04745","SJAG_02814","SJAG_00930","SJAG_02336","SJAG_01297","SJAG_02795","SJAG_01613","SJAG_02609","SJAG_02045","SJAG_04841","SJAG_03835","SJAG_03540","SJAG_04074","SJAG_02624","SJAG_00851","SJAG_03073","SJAG_02270","SJAG_01760","SJAG_01546","SJAG_00332","SJAG_00723"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67412,77100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048487"},{"annotations":[76282,59571,68809,79248,66829,74183,62569,74379,77520,59155,64192,64268,76681,61459,69384,77539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008017"},{"annotations":[71503,72087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051011"},{"annotations":[68955,65828,80251,70974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051010"}]},"cv_name":"molecular_function","definition":"Binding to monomeric or multimeric forms of tubulin, including microtubules.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00332":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01760":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02270":null,"SJAG_02336":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02795":null,"SJAG_02814":null,"SJAG_03073":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04074":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008092","GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"tubulin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0015631","terms_by_termid":{"GO:0008017":null,"GO:0048487":null,"GO:0051010":null,"GO:0051011":null}}


id: PBO:0111934
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family 6","termid":"PBO:0111934"}


id: MONDO:0035586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cramp-fasciculation syndrome","secondary_identifiers":["ICD10CM:G90.8","UMLS:C0751381","MEDGEN:148299","Orphanet:581271","GARD:6205"],"termid":"MONDO:0035586","xrefs":{"Monarch":{"xref_id":"0035586"}}}


id: PBO:0059686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 52","termid":"PBO:0059686"}


id: MONDO:0100174
data:
  {"annotated_genes":["SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013409"}]},"cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing age related macular degeneration.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04114":null},"genotype_count":0,"is_obsolete":false,"name":"age related macular degeneration, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100174","terms_by_termid":{"MONDO:0013409":null},"xrefs":{"Monarch":{"xref_id":"0100174"}}}


id: PBO:0081224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYM-type containing 4","termid":"PBO:0081224"}


id: GO:0045695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of embryo sac egg cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of embryo sac egg cell differentiation","termid":"GO:0045694"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"embryo sac egg cell differentiation","termid":"GO:0009560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryo sac egg cell differentiation","synonyms":[{"name":"down regulation of female gametophyte egg cell differentiation","type":"exact"},{"name":"down-regulation of female gametophyte egg cell differentiation","type":"exact"},{"name":"downregulation of female gametophyte egg cell differentiation","type":"exact"},{"name":"inhibition of female gametophyte egg cell differentiation","type":"narrow"},{"name":"negative regulation of female gametophyte egg cell differentiation","type":"exact"}],"termid":"GO:0045695"}


id: GO:0110027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA strand resection involved in replication fork processing.","definition_xrefs":["PMID:28475874","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA strand resection involved in replication fork processing","termid":"GO:0110026"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"},{"relation_name":"negatively_regulates","term_name":"DNA strand resection involved in replication fork processing","termid":"GO:0110025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"negative regulation of DNA strand resection involved in replication fork processing","termid":"GO:0110027"}


id: PBO:0017739
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolff-Parkinson-White syndrome","termid":"PBO:0017739"}


id: PBO:0072225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20","termid":"PBO:0072225"}


id: GO:0021851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of neuroblasts in the dorsal region of the lateral ganglionic eminence. These cells give rise to embryonic interneuron precursors that will migrate tangentially to the olfactory bulb.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblast division in subpallium","termid":"GO:0021848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast division in dorsal lateral ganglionic eminence","termid":"GO:0021851"}


id: PBO:0047971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRAS1 related extracellular matrix 3","termid":"PBO:0047971"}


id: PBO:0090484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine synthase reductase","termid":"PBO:0090484"}


id: MONDO:0012591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta type V is a moderate type of osteogenesis imperfecta (OI), a genetic disorder characterized by increased bone fragility, low bone mass and susceptibility to bone fractures with variable severity. OI type V is characterized by mild to moderate short stature, dislocation of the radial head, mineralized interosseous membranes, hyperplasic callus, white sclera and no dentinogenesis imperfecta (DI).","definition_xrefs":["Orphanet:216828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 5","secondary_identifiers":["MEDGEN:419332","icd11.foundation:1718903422","GARD:8699","OMIM:610967","DOID:0110344","MESH:C567042","UMLS:C2931093"],"synonyms":[{"name":"IFITM5 osteogenesis imperfecta","type":"exact"},{"name":"OI type 5","type":"exact"},{"name":"OI type V","type":"related"},{"name":"OI with calcification in interosseous membranes","type":"related"},{"name":"OI, type 5","type":"related"},{"name":"OI5","type":"exact"},{"name":"osteogenesis imperfecta caused by mutation in IFITM5","type":"exact"},{"name":"osteogenesis imperfecta type V","type":"exact"},{"name":"osteogenesis imperfecta, type 5","type":"related"},{"name":"osteogenesis imperfecta, type V","type":"related"},{"name":"type V OI","type":"related"}],"termid":"MONDO:0012591","xrefs":{"Monarch":{"xref_id":"0012591"}}}


id: MONDO:0017834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"secondary hypereosinophilic syndrome","secondary_identifiers":["Orphanet:314962","UMLS:C5679897","GARD:21396","MEDGEN:1814441"],"synonyms":[{"name":"HES-R","type":"exact"},{"name":"reactive hypereosinophilic syndrome","type":"exact"},{"name":"secondary HES","type":"exact"}],"termid":"MONDO:0017834","xrefs":{"Monarch":{"xref_id":"0017834"}}}


id: PBO:0085727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the nonsense-mediated mRNA decay (NMD) pathway; interacts with Nam7p and Upf3p; involved in telomere maintenance","termid":"PBO:0085727"}


id: GO:1901978
data:
  {"annotated_genes":["SJAG_04259","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[116976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell cycle checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","PMID:23028116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cell cycle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:2001052"],"synonyms":[{"name":"activation of cell cycle checkpoint","type":"narrow"},{"name":"positive regulation of G1/S checkpoint","type":"related"},{"name":"positive regulation of G1/S transition checkpoint","type":"related"},{"name":"up regulation of cell cycle checkpoint","type":"exact"},{"name":"up-regulation of cell cycle checkpoint","type":"exact"},{"name":"upregulation of cell cycle checkpoint","type":"exact"}],"termid":"GO:1901978","terms_by_termid":{"GO:0090267":null,"GO:1905326":null}}


id: PBO:0011969
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YLL042C","termid":"PBO:0011969"}


id: SO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has arisen from a copy of the parent gene by duplication followed by accumulation of random mutation. The changes, compared to their functional homolog, include insertions, deletions, premature stop codons, frameshifts and a higher proportion of non-synonymous versus synonymous substitutions.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_tRNA","termid":"SO:0000778"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unprocessed_pseudogenic_tRNA","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:unprocessed","type":"exact"},{"name":"unprocessed pseudogenic tRNA","type":"exact"}],"termid":"SO:0002198"}


id: GO:1901447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to propan-1-ol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to alcohol","termid":"GO:1901421"},{"relation_name":"is_a","term_name":"regulation of response to propan-1-ol","termid":"GO:1901445"},{"relation_name":"positively_regulates","term_name":"response to propan-1-ol","termid":"GO:1901427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to propan-1-ol","synonyms":[{"name":"activation of response to propan-1-ol","type":"narrow"},{"name":"up regulation of response to propan-1-ol","type":"exact"},{"name":"up-regulation of response to propan-1-ol","type":"exact"},{"name":"upregulation of response to propan-1-ol","type":"exact"}],"termid":"GO:1901447"}


id: GO:1900089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inositol biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:22307851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inositol biosynthetic process","termid":"GO:1900088"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"inositol biosynthetic process","termid":"GO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inositol biosynthetic process","synonyms":[{"name":"down regulation of inositol anabolism","type":"exact"},{"name":"down regulation of inositol biosynthesis","type":"exact"},{"name":"down regulation of inositol biosynthetic process","type":"exact"},{"name":"down regulation of inositol formation","type":"exact"},{"name":"down regulation of inositol synthesis","type":"exact"},{"name":"down regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"down regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"down regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"down regulation of vitamin Bh biosynthetic process","type":"exact"},{"name":"down-regulation of inositol anabolism","type":"exact"},{"name":"down-regulation of inositol biosynthesis","type":"exact"},{"name":"down-regulation of inositol biosynthetic process","type":"exact"},{"name":"down-regulation of inositol formation","type":"exact"},{"name":"down-regulation of inositol synthesis","type":"exact"},{"name":"down-regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"down-regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"down-regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"down-regulation of vitamin Bh biosynthetic process","type":"exact"},{"name":"downregulation of inositol anabolism","type":"exact"},{"name":"downregulation of inositol biosynthesis","type":"exact"},{"name":"downregulation of inositol biosynthetic process","type":"exact"},{"name":"downregulation of inositol formation","type":"exact"},{"name":"downregulation of inositol synthesis","type":"exact"},{"name":"downregulation of myo-inositol biosynthesis","type":"narrow"},{"name":"downregulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"downregulation of vitamin Bh biosynthesis","type":"exact"},{"name":"downregulation of vitamin Bh biosynthetic process","type":"exact"},{"name":"inhibition of inositol anabolism","type":"exact"},{"name":"inhibition of inositol biosynthesis","type":"exact"},{"name":"inhibition of inositol biosynthetic process","type":"narrow"},{"name":"inhibition of inositol formation","type":"exact"},{"name":"inhibition of inositol synthesis","type":"exact"},{"name":"inhibition of myo-inositol biosynthesis","type":"narrow"},{"name":"inhibition of myo-inositol biosynthetic process","type":"narrow"},{"name":"inhibition of vitamin Bh biosynthesis","type":"exact"},{"name":"inhibition of vitamin Bh biosynthetic process","type":"exact"},{"name":"negative regulation of inositol anabolism","type":"exact"},{"name":"negative regulation of inositol biosynthesis","type":"exact"},{"name":"negative regulation of inositol formation","type":"exact"},{"name":"negative regulation of inositol synthesis","type":"exact"},{"name":"negative regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"negative regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"negative regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"negative regulation of vitamin Bh biosynthetic process","type":"exact"}],"termid":"GO:1900089"}


id: MONDO:0015162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare syndromic intellectual disability.","gene_count":0,"genotype_count":0,"name":"obsolete rare syndromic intellectual disability (obsolete MONDO:0015162)","secondary_identifiers":["Orphanet:102369"],"synonyms":[{"name":"rare syndromic intellectual disability","type":"exact"}],"termid":"MONDO:0015162","xrefs":{"Monarch":{"xref_id":"0015162"}}}


id: PBO:0062929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 3-hydroxylase 2","termid":"PBO:0062929"}


id: PBO:0045112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin matrix acidic phosphoprotein 1","termid":"PBO:0045112"}


id: GO:0102712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A13 + 2-oxoglutarate + O2 = gibberellin A43 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A13,oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0102712)","termid":"GO:0102712"}


id: MONDO:0009805
data:
  {"annotated_genes":["SJAG_02413"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86619],"is_not":false,"summary":null,"term":"MONDO:0009805"}]},"cv_name":"mondo","definition":"Any osteogenesis imperfecta in which the cause of the disease is a mutation in the PPIB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C564921","DOID:0110349","OMIM:259440","UMLS:C1850169","GARD:10619","MEDGEN:376720"],"synonyms":[{"name":"OI 9","type":"related"},{"name":"OI type IX","type":"related"},{"name":"OI, type 9","type":"related"},{"name":"OI9","type":"exact"},{"name":"PPIB osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta caused by mutation in PPIB","type":"exact"},{"name":"osteogenesis imperfecta sillence type II/III without abnormality of type I collagen","type":"related"},{"name":"osteogenesis imperfecta type 9","type":"exact"},{"name":"osteogenesis imperfecta type IX","type":"exact"},{"name":"osteogenesis imperfecta, type 9","type":"related"},{"name":"osteogenesis imperfecta, type IX","type":"related"}],"termid":"MONDO:0009805","terms_by_termid":{"MONDO:0009805":null},"xrefs":{"Monarch":{"xref_id":"0009805"}}}


id: PBO:0017831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZIP zinc transmembrane transporter Zrt2 (predicted)","termid":"PBO:0017831"}


id: GO:1905543
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-15 (IL-15) and that consists of, at a minimum, an interleukin, an alpha, beta and gamma chain as well as optional additional kinase subunits. The alpha chain is unique to binds IL-15 while it shares the beta chain with the IL-2 receptor and the cytokine receptor common gamma chain with multiple interleukin receptors.","definition_xrefs":["GOC:bhm","GOC:TermGenie","GO_REF:0000088","PMID:23104097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interleukin-15 receptor complex","synonyms":[{"name":"IL-15 receptor complex","type":"exact"},{"name":"IL-15-receptor complex","type":"exact"},{"name":"IL15 receptor complex","type":"exact"},{"name":"IL15-receptor complex","type":"exact"},{"name":"interleukin-15-receptor complex","type":"exact"}],"termid":"GO:1905543"}


id: PBO:0045776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelial cell surface expressed chemotaxis and apoptosis regulator","termid":"PBO:0045776"}


id: GO:0047512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S,S)-butane-2,3-diol + NAD+ = acetoin + H+ + NADH.","definition_xrefs":["RHEA:12184","EC:1.1.1.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(S,S)-butanediol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03707","MetaCyc:SS-BUTANEDIOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(S,S)-butane-2,3-diol:NAD+ oxidoreductase activity","type":"related"},{"name":"L(+)-2,3-butanediol dehydrogenase (L-acetoin forming)","type":"related"},{"name":"L-BDH","type":"related"},{"name":"L-butanediol dehydrogenase activity","type":"related"}],"termid":"GO:0047512"}


id: MONDO:0017597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"T-cell/histiocyte rich large B cell lymphoma (THRLBCL) is a rare variant of diffuse large B-cell lymphoma (DLBCL), mainly affecting middle-aged men and often not being discovered until an advanced disease stage, with involvement of the spleen, liver and bone marrow occurring at a greater frequency than in DLBCL. It is often difficult to diagnose due to its similarity with other lymphoid diseases such as classic Hodgkin lymphoma and nodular lymphocyte-predominant Hodgkin lymphoma and has an aggressive clinical course.","definition_xrefs":["Orphanet:300857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"T-cell/histiocyte rich large B cell lymphoma","secondary_identifiers":["GARD:12257","ICDO:9688/3","icd11.foundation:257833622","ONCOTREE:THRLBCL","MEDGEN:232943","NCIT:C9496","UMLS:C1321547","ICDO:9680/3"],"synonyms":[{"name":"T-cell rich/histiocyte-rich large B-cell lymphoma","type":"exact"},{"name":"T-cell/histiocyte rich lymphoma","type":"exact"},{"name":"T-cell/histiocyte-rich large B-cell lymphoma","type":"exact"},{"name":"THRLBCL","type":"exact"}],"termid":"MONDO:0017597","xrefs":{"Monarch":{"xref_id":"0017597"}}}


id: PBO:0040331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 6","termid":"PBO:0040331"}


id: GO:0034776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a histamine stimulus. Histamine, the biogenic amine 2-(1H-imidazol-4-yl)ethanamine, is involved in local immune responses as well as regulating physiological function in the gut and acting as a neurotransmitter.","definition_xrefs":["GOC:BHF","GOC:vk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to histamine","synonyms":[{"name":"response to histamine stimulus","type":"exact"}],"termid":"GO:0034776"}


id: GO:1990981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of protein localization to cell division site involved in cell separation after cytokinesis.","definition_xrefs":["PMID:25411334"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein localization to cell division site involved in cell separation after cytokinesis (obsolete GO:1990981)","termid":"GO:1990981"}


id: PBO:0087035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L17A; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; copurifies with the Dam1 complex (aka DASH complex); homologous to mammalian ribosomal protein L17 and bacterial L22; RPL17A has a paralog, RPL17B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087035"}


id: PBO:0054710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2119","termid":"PBO:0054710"}


id: PBO:0071485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 26","termid":"PBO:0071485"}


id: PBO:0057632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1207","termid":"PBO:0057632"}


id: PBO:0045544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine synthase 4 like","termid":"PBO:0045544"}


id: MONDO:0010789
data:
  {"annotated_genes":["SJAG_MIT13","SJAG_MIT20","SJAG_MIT04","SJAG_MIT03"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86500,86501,86502,86503],"is_not":false,"summary":null,"term":"MONDO:0010789"}]},"cv_name":"mondo","definition":"MELAS (Mitochondrial myopathy, encephalopathy, lactic acidosis, and stroke) syndrome is a rare progressive multisystemic disorder characterized by encephalomyopathy, lactic acidosis, and stroke-like episodes. Other features include endocrinopathy, heart disease, diabetes, hearing loss, and neurological and psychiatric manifestations.","definition_xrefs":["Orphanet:550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"mitochondrial encephalomyopathy","termid":"MONDO:0004675"}],"gene_count":4,"genes_by_uniquename":{"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005336","MONDO:0005066"],"is_obsolete":false,"name":"MELAS syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:277.87","GARD:7009","MedDRA:10053872","NANDO:1200176","NCIT:C84885","SCTID:39925003","UMLS:C0162671","DOID:3687","ICD10CM:E88.41","OMIM:540000","MESH:D017241","MEDGEN:56485","NANDO:2200525"],"synonyms":[{"name":"MELAS","type":"related"},{"name":"MELAS syndrome","type":"exact"},{"name":"mitochondrial encephalomyopathy lactic acidosis and stroke-like episodes","type":"related"},{"name":"mitochondrial encephalomyopathy, lactic acidosis and stroke","type":"exact"},{"name":"mitochondrial encephalomyopathy, lactic acidosis and stroke-like episodes","type":"exact"},{"name":"mitochondrial myopathy, encephalopathy, lactic acidosis and stroke-like episodes","type":"exact"},{"name":"mitochondrial myopathy, encephalopathy, lactic acidosis, and stroke-like episodes","type":"exact"}],"termid":"MONDO:0010789","terms_by_termid":{"MONDO:0010789":null},"xrefs":{"Monarch":{"xref_id":"0010789"}}}


id: GO:0031458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + a betaine(out) = ADP + phosphate + a betaine(in).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type betaine transporter activity","synonyms":[{"name":"ABC-type betaine transmembrane transporter activity","type":"exact"},{"name":"ATP-dependent betaine transporter activity","type":"exact"},{"name":"ATPase-coupled betaine transporter activity","type":"related"},{"name":"betaine ABC transporter","type":"narrow"},{"name":"betaine-transporting ATPase activity","type":"exact"}],"termid":"GO:0031458"}


id: PBO:0072213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 12","termid":"PBO:0072213"}


id: GO:2000840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dehydroepiandrosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"dehydroepiandrosterone secretion","termid":"GO:0035942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of dehydroepiandrosterone secretion","synonyms":[{"name":"regulation of 3beta-hydroxyandrost-5-en-17-one secretion","type":"exact"},{"name":"regulation of DHEA secretion","type":"exact"},{"name":"regulation of dehydroisoandrosterone secretion","type":"exact"}],"termid":"GO:2000840"}


id: PR:Q09926
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor pcr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC21E11.03c","synonyms":[{"name":"Spom972h-pcr1","type":"exact"},{"name":"transcription factor mts2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09926"}


id: GO:0060369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the Fc receptor mediated stimulatory signaling pathway.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"is_a","term_name":"regulation of Fc receptor mediated stimulatory signaling pathway","termid":"GO:0060368"},{"relation_name":"positively_regulates","term_name":"Fc receptor mediated stimulatory signaling pathway","termid":"GO:0002431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Fc receptor mediated stimulatory signaling pathway","synonyms":[{"name":"positive regulation of Fc receptor mediated stimulatory signalling pathway","type":"exact"}],"termid":"GO:0060369"}


id: MONDO:0019371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of narcolepsy characterized by excessive day-time sleepiness associated with uncontrollable sleep urges and sometimes paralysis at sleep, hypnagogic hallucinations and automatic behavior.","definition_xrefs":["Orphanet:83465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"narcolepsy","termid":"MONDO:0021107"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy without cataplexy","secondary_identifiers":["ICD10CM:G47.4","ICD10CM:G47.419","ICD9:347.00","icd11.foundation:1494673323","SCTID:91521000119104","UMLS:C1456240","MEDGEN:781102","EFO:0005855","GARD:19038"],"synonyms":[{"name":"narcolepsy type 2","type":"exact"}],"termid":"MONDO:0019371","xrefs":{"Monarch":{"xref_id":"0019371"}}}


id: PR:O59797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nap1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein C364.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.06","synonyms":[{"name":"Spom972h-nap1","type":"exact"}],"termid":"PR:O59797"}


id: GO:2000834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of androgen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"androgen secretion","termid":"GO:0035935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of androgen secretion","termid":"GO:2000834"}


id: MONDO:0014430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the FBXO31 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 45","secondary_identifiers":["OMIM:615979","DOID:0081209","MEDGEN:863301","UMLS:C4014864","GARD:22567"],"synonyms":[{"name":"FBXO31 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT45","type":"related"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in FBXO31","type":"exact"},{"name":"intellectual disability, autosomal recessive 45","type":"exact"},{"name":"intellectual disability, autosomal recessive type 45","type":"exact"},{"name":"mental retardation, autosomal recessive 45","type":"related"},{"name":"mental retardation, autosomal recessive type 45","type":"exact"}],"termid":"MONDO:0014430","xrefs":{"Monarch":{"xref_id":"0014430"}}}


id: PBO:0078277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 10-1","termid":"PBO:0078277"}


id: PR:O14066
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tax4 gene.","definition_xrefs":["UniProtKB:O14066","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased rDNA silencing protein 4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.09","synonyms":[{"name":"Spom972h-tax4","type":"exact"}],"termid":"PR:O14066"}


id: MONDO:0700048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by redness, pain, swelling, and tingling in the palms of the hands or the soles of the feet. It may appear as a side effect to chemotherapy agents.","definition_xrefs":["NCIT:C27177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hand-foot syndrome","secondary_identifiers":["UMLS:C0549410","MEDGEN:107497","MESH:D060831"],"synonyms":[{"name":"palmar-plantar erythrodysthesia","type":"exact"}],"termid":"MONDO:0700048","xrefs":{"Monarch":{"xref_id":"0700048"}}}


id: GO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of nodular inflammatory lesions, usually small or granular, firm, persistent, well-structured, and containing compactly grouped T lymphocytes and modified phagocytes such as epithelioid cells, giant cells, and other macrophages. Granuloma formation represents a chronic inflammatory response initiated by various infectious and noninfectious agents. The center of a granuloma consists of fused macrophages, which can become necrotic.","definition_xrefs":["GO_REF:0000022","ISBN:081533642X","ISBN:068340007X","GOC:add","ISBN:0721601464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"part_of","term_name":"chronic inflammatory response","termid":"GO:0002544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granuloma formation","termid":"GO:0002432"}


id: PBO:0036404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anamorsin family iron-sulfur cluster protein Dre2 (predicted)","termid":"PBO:0036404"}


id: PBO:0090146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex polyphosphate synthetase subunit Vtc2/3","termid":"PBO:0090146"}


id: PBO:0055823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRAT domain containing 1","termid":"PBO:0055823"}


id: GO:0044017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 27) = CoA + histone H3 N6-acetyl-L-lysine (position 27).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0003674","GO:0016740","GO:0003824","GO:0034212"],"is_obsolete":false,"name":"histone H3K27 acetyltransferase activity","synonyms":[{"name":"histone H3-K27 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K27 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K27 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0044017"}


id: PATO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is increased by a high degree.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased temperature","termid":"PATO:0001305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe increased temperature","termid":"PATO:0001317"}


id: PBO:0078694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (AAG) 5-1","termid":"PBO:0078694"}


id: PBO:0062857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopetrin 2","termid":"PBO:0062857"}


id: PBO:0049561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 27, pseudogene","termid":"PBO:0049561"}


id: PBO:0071787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p14","termid":"PBO:0071787"}


id: MONDO:0030341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myasthenic syndrome, congenital, 7B, presynaptic, autosomal recessive","secondary_identifiers":["UMLS:C5561947","MEDGEN:1794157","OMIM:619461"],"synonyms":[{"name":"CMS7B","type":"exact"},{"name":"myasthenic syndrome, congenital, 7B, presynaptic, autosomal recessive","type":"exact"}],"termid":"MONDO:0030341","xrefs":{"Monarch":{"xref_id":"0030341"}}}


id: MONDO:0006720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neoplasms containing cyst-like formations or producing mucin or serum.","definition_xrefs":["MESH:D018297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic, mucinous, and serous neoplasm","secondary_identifiers":["UMLS:C0206767","MEDGEN:61678","EFO:1000889"],"termid":"MONDO:0006720","xrefs":{"Monarch":{"xref_id":"0006720"}}}


id: GO:0099125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein kinase complex comprising a conserved PAK/GC/Ste20 family kinase, leucine rich repeat protein Sog2 family, which function as part of the cell shape network.","definition_xrefs":["PMID:23462181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PAK family kinase-Sog2 complex","termid":"GO:0099125"}


id: PBO:0049687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepcidin antimicrobial peptide","termid":"PBO:0049687"}


id: PBO:0066515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of cell cycle","termid":"PBO:0066515"}


id: GO:0045996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving pheromones that stops, prevents or reduces the rate of transcription.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription by pheromones (obsolete GO:0045996)","synonyms":[{"name":"down regulation of transcription by pheromones","type":"exact"},{"name":"down-regulation of transcription by pheromones","type":"exact"},{"name":"downregulation of transcription by pheromones","type":"exact"},{"name":"inhibition of transcription by pheromones","type":"narrow"}],"termid":"GO:0045996"}


id: GO:0070376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction mediated by the ERK5 cascade.","definition_xrefs":["ISBN:0121245462","GOC:add","ISBN:0896039986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"regulates","term_name":"ERK5 cascade","termid":"GO:0070375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ERK5 cascade","synonyms":[{"name":"regulation of BMK cascade","type":"exact"},{"name":"regulation of BMK signaling pathway","type":"exact"},{"name":"regulation of BMK signalling pathway","type":"exact"},{"name":"regulation of BMK1 cascade","type":"exact"},{"name":"regulation of ERK5 signaling pathway","type":"exact"},{"name":"regulation of MAPK7 cascade","type":"exact"}],"termid":"GO:0070376"}


id: PR:O14138
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25A8.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25A8.03c","synonyms":[{"name":"Spom972h-SPAC25A8.03c","type":"exact"},{"name":"protein midA homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14138"}


id: PBO:0064005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 39","termid":"PBO:0064005"}


id: PBO:0089405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational activator, zf-CCHC type zinc finger protein","termid":"PBO:0089405"}


id: GO:0097060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized area of membrane on either the presynaptic or the postsynaptic side of a synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.","definition_xrefs":["PMID:20410104","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"synaptic membrane","termid":"GO:0097060"}


id: PBO:0061275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase activator 1","termid":"PBO:0061275"}


id: PBO:0042498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 18","termid":"PBO:0042498"}


id: GO:1902685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor localization to synapse.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000058","PMID:22252129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"positively_regulates","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor localization to synapse","synonyms":[{"name":"activation of receptor localisation to synapse","type":"narrow"},{"name":"activation of receptor localization to synapse","type":"narrow"},{"name":"positive regulation of receptor localisation to synapse","type":"exact"},{"name":"up regulation of receptor localisation to synapse","type":"exact"},{"name":"up regulation of receptor localization to synapse","type":"exact"},{"name":"up-regulation of receptor localisation to synapse","type":"exact"},{"name":"up-regulation of receptor localization to synapse","type":"exact"},{"name":"upregulation of receptor localisation to synapse","type":"exact"},{"name":"upregulation of receptor localization to synapse","type":"exact"}],"termid":"GO:1902685"}


id: PBO:0027680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_transcription_during_vegetative_growth","termid":"PBO:0027680"}


id: PBO:0018119
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective In Sister chromatid disjoining","termid":"PBO:0018119"}


id: PBO:0076166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1A member 2","termid":"PBO:0076166"}


id: MONDO:1012980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucolipidosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucolipidosis, non-human animal","termid":"MONDO:1012980","xrefs":{"Monarch":{"xref_id":"1012980"}}}


id: MONDO:0024648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the visual pathway.","definition_xrefs":["NCIT:C5587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual pathway disorder","termid":"MONDO:0001834"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optic tract meningioma","secondary_identifiers":["UMLS:C1336972","MEDGEN:234991"],"synonyms":[{"name":"meningioma (disease) of optic tract","type":"exact"},{"name":"meningioma of optic tract","type":"exact"},{"name":"meningioma of the optic tract","type":"exact"},{"name":"meningioma of the visual pathway","type":"exact"},{"name":"meningioma of visual pathway","type":"exact"},{"name":"optic tract meningioma","type":"exact"},{"name":"optic tract meningioma (disease)","type":"exact"},{"name":"visual pathway meningioma","type":"exact"}],"termid":"MONDO:0024648","xrefs":{"Monarch":{"xref_id":"0024648"}}}


id: GO:0010998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation in response to stress by the phosphorylation of eIF2 alpha.","definition_xrefs":["GOC:hjd","GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational initiation by eIF2 alpha phosphorylation","synonyms":[{"name":"eIF2 alpha phosphorylation in response to stress","type":"exact"},{"name":"regulation of translational initiation by eIF2 alpha phosphorylation in response to stress","type":"exact"}],"termid":"GO:0010998"}


id: PBO:0110502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFRSF10B antisense RNA 1","termid":"PBO:0110502"}


id: GO:0102042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-2,3,7-trideoxy-D-lyxo-hept-6-ulosonic acid + H2O + NAD = 3-dehydroquinate + ammonium + NADH + H+.","definition_xrefs":["GOC:pz","RHEA:25956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dehydroquinate synthase activity","secondary_identifiers":["EC:1.4.1.24","MetaCyc:RXN-10032"],"termid":"GO:0102042"}


id: MONDO:0044791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare tumor containing unequivocal elements of both hepatocellular and cholangiocarcinoma that are intimately admixed. This tumor should be distinguished from separate hepatocellular carcinoma and cholangiocarcinoma arising in the same liver. The prognosis of this tumor is poor.","definition_xrefs":["NCIT:C3828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma of gallbladder and extrahepatic biliary tract","termid":"MONDO:0018536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"combined hepatocellular carcinoma and cholangiocarcinoma","secondary_identifiers":["GARD:22200","icd11.foundation:1600108866","icd11.foundation:1097637010","UMLS:C0221287","MEDGEN:113160","Orphanet:529852","SCTID:274902006"],"synonyms":[{"name":"Cholangiohepatoma","type":"exact"},{"name":"Hepatocholangiocarcinoma","type":"exact"},{"name":"Mixed hepatocellular cholangiocarcinoma","type":"exact"},{"name":"carcinoma of liver and intrahepatic biliary tract","type":"broad"},{"name":"carcinoma of the liver and intrahepatic biliary tract","type":"exact"},{"name":"combined hepatocellular cancer and cholangiocarcinoma (bile duct cancer)","type":"exact"},{"name":"combined hepatocellular cancer and intrahepatic bile duct cancer (cholangiocarcinoma)","type":"exact"},{"name":"combined hepatocellular carcinoma and cholangiocarcinoma","type":"exact"},{"name":"liver and intrahepatic biliary tract carcinoma","type":"broad"}],"termid":"MONDO:0044791","xrefs":{"Monarch":{"xref_id":"0044791"}}}


id: PR:O74963
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nca2 gene.","definition_xrefs":["UniProtKB:O74963","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear control of ATPase protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.02c","synonyms":[{"name":"Spom972h-nca2","type":"exact"}],"termid":"PR:O74963"}


id: GO:1902796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snoRNA processing.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of snoRNA metabolic process","termid":"GO:1903323"},{"relation_name":"regulates","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0016074","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of snoRNA processing","termid":"GO:1902796"}


id: PBO:0005833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSN-associated deubiquitinating enzyme Ubp12","termid":"PBO:0005833"}


id: GO:0052156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the T-cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host T-cell mediated immune response","secondary_identifiers":["GO:0052295"],"synonyms":[{"name":"modulation by organism of T-cell mediated immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host T-cell mediated immune response","type":"exact"},{"name":"perturbation of host T-cell mediated immune response","type":"exact"},{"name":"symbiont-mediated modulation of host cell-mediated immune response","type":"exact"},{"name":"symbiont-mediated perturbation of host cell-mediated immune response","type":"exact"}],"termid":"GO:0052156"}


id: PR:Q9UT60
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trans-1,2-dihydrobenzene-1,2-diol dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01226","PRO:DNx","PANTHER:PTHR22604:SF15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C513.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.06c","secondary_identifiers":["UniProtKB:Q9UT60"],"synonyms":[{"name":"Spom972h-DHDH","type":"exact"}],"termid":"PR:Q9UT60"}


id: MONDO:0019505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Hypomyelination-hypogonadotropic hypogonadism-hypodontia syndrome is characterized by the association of demyelinating leukodystrophy with progressive cerebellar ataxia, hypogonadotropic hypogonadism and hypodontia.","definition_xrefs":["Orphanet:88637"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"leukoencephalopathy-ataxia-hypodontia-hypomyelination syndrome","termid":"MONDO:0011897"}],"gene_count":0,"genotype_count":0,"name":"obsolete hypomyelination-hypogonadotropic hypogonadism-hypodontia syndrome (obsolete MONDO:0019505)","synonyms":[{"name":"4H syndrome","type":"exact"}],"termid":"MONDO:0019505","xrefs":{"Monarch":{"xref_id":"0019505"}}}


id: PBO:0064916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R2 pseudogene 5","termid":"PBO:0064916"}


id: MONDO:0017755
data:
  {"annotated_genes":["SJAG_05194","SJAG_03363","SJAG_03011","SJAG_05213","SJAG_00938","SJAG_01344","SJAG_03785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"},{"annotations":[87140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[87325,87324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[86229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[85657,85658,85659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009380"},{"annotations":[87263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","definition":"An instance of bilirubin metabolism disease that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of porphyrin metabolism","termid":"MONDO:0017754"},{"relation_name":"is_a","term_name":"bilirubin metabolism disease","termid":"MONDO:0024431"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01344":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_03785":null,"SJAG_05194":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of bilirubin metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:309816","GARD:21347","UMLS:C0349427","MEDGEN:1671515","icd11.foundation:1297666279"],"synonyms":[{"name":"bilirubin metabolism disorder","type":"related"},{"name":"disorder of bilirubin metabolism","type":"broad"},{"name":"disorder of bilirubin metabolism and excretion","type":"exact"},{"name":"hereditary bilirubin metabolism disease","type":"exact"},{"name":"inborn disorder of bilirubin metabolism and excretion","type":"exact"}],"termid":"MONDO:0017755","terms_by_termid":{"MONDO:0008822":null,"MONDO:0009380":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0017755"}}}


id: PBO:0087359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing protein; required for splicing of two mitochondrial group I introns (BI3 in COB and AI5beta in COX1); forms a splicing complex, containing four subunits of Mrs1p and two subunits of the BI3-encoded maturase, that binds to the BI3 RNA; MRS1 has a paralog, CCE1, that arose from the whole genome duplication","termid":"PBO:0087359"}


id: PR:O60168
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lcl3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease C19F8.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.04c","synonyms":[{"name":"Spom972h-lcl3","type":"exact"}],"termid":"PR:O60168"}


id: RO:0002524
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has subsequence y iff all of the sequence parts of x are sequence parts of y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"},{"relation_name":"is_a","term_name":"bounds_sequence_of","termid":"RO:0002522"},{"relation_name":"is_a","term_name":"overlaps_sequence_of","termid":"RO:0002526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_subsequence","termid":"RO:0002524"}


id: PBO:0065217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase 2","termid":"PBO:0065217"}


id: FYPO:0000888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000877"},{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000886"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation at centromere outer repeat during vegetative growth","termid":"FYPO:0003096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 dimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"decreased histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased histone H3K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000888"}


id: GO:0090176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins and contributes to the establishment of planar polarity.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"part_of","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"microtubule cytoskeleton organization involved in establishment of planar polarity","synonyms":[{"name":"microtubule cytoskeleton organisation involved in establishment of planar polarity","type":"exact"}],"termid":"GO:0090176"}


id: PBO:0004851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga1","termid":"PBO:0004851"}


id: MONDO:0013572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"Keppen-Lubinsky syndrome","secondary_identifiers":["OMIM:614098","GARD:17716","UMLS:C3279800","MEDGEN:481430","Orphanet:435628"],"synonyms":[{"name":"KEPPEN-Lubinsky syndrome","type":"related"},{"name":"KPLBS","type":"related"},{"name":"Keppen-Lubinsky syndrome","type":"exact"},{"name":"generalised lipodystrophy-progeroid features-severe intellectual disability syndrome","type":"exact"},{"name":"generalized lipodystrophy-progeroid features-severe intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0013572","xrefs":{"Monarch":{"xref_id":"0013572"}}}


id: PBO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit K (predicted)","termid":"PBO:0001597"}


id: MONDO:0043283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"silicosis","termid":"MONDO:0005960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silicosiderosis","secondary_identifiers":["MEDGEN:5480","GARD:8372","SCTID:34004002","icd11.foundation:273225437","UMLS:C0018929","MESH:C537337"],"synonyms":[{"name":"hematite miners' lung disease","type":"related"},{"name":"hematite pneumoconiosis","type":"related"},{"name":"iron miners lung","type":"related"},{"name":"siderosilicosis","type":"exact"},{"name":"silicosiderosis","type":"exact"}],"termid":"MONDO:0043283","xrefs":{"Monarch":{"xref_id":"0043283"}}}


id: PBO:0064651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRF interacting protein alpha 2","termid":"PBO:0064651"}


id: MONDO:0017186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diazoxide-resistant hyperinsulism (DRH) is form of congenital isolated hyperinsulism caused by an abnormal insulin production by B-cells in the pancreas that can be diffuse or focal and is characterized by an excessive/ uncontrolled insulin secretion (inappropriate for the level of glycemia), recurrent episodes of profound hypoglycemia and resistance to medical management with diazoxide.","definition_xrefs":["Orphanet:276585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital isolated hyperinsulinism","termid":"MONDO:0019010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0004335"],"is_obsolete":false,"name":"diazoxide-resistant hyperinsulinism","secondary_identifiers":["UMLS:C5679778","GARD:21055","MEDGEN:1842507"],"synonyms":[{"name":"diazoxide-resistant hyperinsulinemic hypoglycemia","type":"exact"}],"termid":"MONDO:0017186","xrefs":{"Monarch":{"xref_id":"0017186"}}}


id: GO:0046006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of activated T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"regulates","term_name":"activated T cell proliferation","termid":"GO:0050798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activated T cell proliferation","synonyms":[{"name":"regulation of activated T lymphocyte proliferation","type":"exact"},{"name":"regulation of activated T-cell proliferation","type":"exact"},{"name":"regulation of activated T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046006"}


id: GO:0062076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8Z,11Z,14Z)-eicosatrienoyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (5Z,8Z,11Z,14Z)-eicosatetraenoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O. Can also use a substrate with 3 double bonds (a (8Z,11Z,14Z,17Z)-eicosatetraenoyl-CoA) and add a fourth double bond (a (5Z,8Z,11Z,14Z,17Z)-eicosapentaenoyl-CoA).","definition_xrefs":["PMID:10601301","RHEA:46424","PMID:10769175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"acyl-CoA (8-3)-desaturase activity","secondary_identifiers":["EC:1.14.19.44"],"synonyms":[{"name":"acyl-CoA D5-desaturase activity","type":"exact"},{"name":"acyl-CoA delta(5)-desaturase activity","type":"exact"},{"name":"acyl-CoA delta5-desaturase activity","type":"exact"}],"termid":"GO:0062076"}


id: MONDO:1012673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of progressive retinal atrophy that occurs in dogs due to a mutation in the RHO gene.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant progressive retinal atrophy, RHO-related, dog","secondary_identifiers":["OMIA:001346-9615"],"synonyms":[{"name":"ADPRA","type":"exact"}],"termid":"MONDO:1012673","xrefs":{"Monarch":{"xref_id":"1012673"}}}


id: GO:0075291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of aplanospore formation, a process in which a nonmotile, asexual spore is formed within a cell in certain algae and fungi (commonly in the Phycomycetes), the wall of aplanospore is distinct from that of the parent cell.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sporangiospore formation","termid":"GO:0075287"},{"relation_name":"is_a","term_name":"regulation of aplanospore formation","termid":"GO:0075290"},{"relation_name":"positively_regulates","term_name":"aplanospore formation","termid":"GO:0075289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aplanospore formation","termid":"GO:0075291"}


id: GO:0048825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cotyledon over time, from its formation to the mature structure. The cotyledon is the modified leaf (seed leaf), found as part of the embryo in plant seeds. It is involved in either storage or absorption of food reserves. Dicotyledonous seeds contain two cotyledons, while monocotyledonous seeds contain only one. The cotyledons may appear above ground and show photosynthetic activity in the seedling.","definition_xrefs":["GOC:devbiol","PO:0020030","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo development ending in seed dormancy","termid":"GO:0009793"},{"relation_name":"is_a","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cotyledon development","termid":"GO:0048825"}


id: GO:0009135
data:
  {"annotated_genes":["SJAG_02945","SJAG_00027","SJAG_06621","SJAG_02038","SJAG_03660","SJAG_02107","SJAG_02135","SJAG_04334","SJAG_01310","SJAG_03373","SJAG_04849","SJAG_00461","SJAG_04048","SJAG_02369","SJAG_02785","SJAG_06622","SJAG_03903","SJAG_02009","SJAG_05314","SJAG_04192","SJAG_02796","SJAG_04495","SJAG_00685","SJAG_03828","SJAG_00839","SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[109701,109702,103698,116652,109697,103954,78210,105776,98590,105778,109699,105777,109703,98318,95352,109698,94863,106146,106147,109700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[64496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046710"},{"annotations":[88948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[73408,76377],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[70420],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine nucleoside diphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04849":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine nucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine nucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009135","terms_by_termid":{"GO:0006110":null,"GO:0006172":null,"GO:0045820":null,"GO:0046710":null,"GO:0061613":null,"GO:0061621":null}}


id: SO:0001205
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (DNA) to which the SP6 RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Phage_RNA_Polymerase_Promoter","termid":"SO:0001204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP6_RNA_Polymerase_Promoter","synonyms":[{"name":"SP6 RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001205"}


id: PR:Q10252
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 4-hydroxybenzoate polyprenyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11048:SF2","OMA:SCHPO00452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxybenzoate polyprenyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.04c","secondary_identifiers":["UniProtKB:Q10252"],"synonyms":[{"name":"4-HB polyprenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"4-hydroxybenzoate decaprenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PHB:PPT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PHB:polyprenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COQ2","type":"exact"},{"name":"p-hydroxybenzoate polyprenyl diphosphate transferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"para-hydroxybenzoate--polyprenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10252"}


id: PBO:0053214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 9D, pseudogene","termid":"PBO:0053214"}


id: GO:0000278
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id: FYPO:0001946
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id: MONDO:0032898
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id: PBO:0003549
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id: PBO:0089728
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id: PBO:0073282
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id: PBO:0002052
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  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human HSET","termid":"PBO:0002052"}


id: MONDO:0032625
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id: MONDO:0003821
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor that arises from the ovary and is composed of tissues that originate from two or three of the following germ layers, endoderm, ectoderm, or mesoderm.","definition_xrefs":["NCIT:C39992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian teratoma","termid":"MONDO:0005602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian biphasic or triphasic teratoma","secondary_identifiers":["MEDGEN:274086","UMLS:C1518691","DOID:6232"],"synonyms":[{"name":"ovarian biphasic or triphasic teratoma","type":"exact"}],"termid":"MONDO:0003821","xrefs":{"Monarch":{"xref_id":"0003821"}}}


id: PBO:0073385
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id: GO:1901625
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id: GO:0005367
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: myo-inositol(out) + Na+(out) = myo-inositol(in) + Na+(in).","definition_xrefs":["TC:2.A.21.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myo-inositol transmembrane transporter activity","termid":"GO:0005365"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"myo-inositol:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-429663"],"synonyms":[{"name":"myo-inositol-sodium cotransporter activity","type":"broad"}],"termid":"GO:0005367"}


id: PBO:0027090
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id: GO:1903368
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of foraging behavior.","definition_xrefs":["GOC:mr","PMID:8677262","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"foraging behavior","termid":"GO:0060756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of foraging behavior","termid":"GO:1903368"}


id: PBO:0018084
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam13","termid":"PBO:0018084"}


id: GO:0034076
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id: GO:0034168
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 10 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 10 signaling pathway","termid":"GO:0034167"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 10 signaling pathway","termid":"GO:0034166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 10 signaling pathway","synonyms":[{"name":"negative regulation of TLR10 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 10 signalling pathway","type":"exact"}],"termid":"GO:0034168"}


id: GO:0051777
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:ent-kaur-16-en-19-oate + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = gibberellin A12 + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase]. Catalyzes three successive oxidations of ent-kaurenoic acid.","definition_xrefs":["RHEA:33219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ent-kaurenoic acid monooxygenase activity","secondary_identifiers":["EC:1.14.14.107"],"synonyms":[{"name":"ent-kaurenoate oxidase activity","type":"related"},{"name":"ent-kaurenoic acid oxidase activity","type":"related"}],"termid":"GO:0051777"}


id: PBO:0036542
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id: GO:0016243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the autophagosome.","definition_xrefs":["GOC:krc","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"},{"relation_name":"is_a","term_name":"autophagosome organization","termid":"GO:1905037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"regulation of autophagosome size","synonyms":[{"name":"regulation of autophagic vacuole size","type":"exact"}],"termid":"GO:0016243"}


id: PBO:0047935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(12)(q24.13)","termid":"PBO:0047935"}


id: PBO:0067812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 114","termid":"PBO:0067812"}


id: PBO:0072860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seryl-tRNA synthetase 1","termid":"PBO:0072860"}


id: MONDO:0023286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis","termid":"MONDO:0002771"},{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"graphite pneumoconiosis","secondary_identifiers":["SCTID:17385007","MEDGEN:120502","UMLS:C0264439","GARD:8359","ICD9:503"],"synonyms":[{"name":"carbon pneumoconiosis","type":"related"},{"name":"graphite fibrosis","type":"related"},{"name":"graphite fibrosis of lung","type":"exact"},{"name":"graphite lung disease","type":"related"},{"name":"graphite pneumoconiosis","type":"exact"},{"name":"graphitosis","type":"related"}],"termid":"MONDO:0023286","xrefs":{"Monarch":{"xref_id":"0023286"}}}


id: GO:0032881
data:
  {"annotated_genes":["SJAG_00963","SJAG_01376","SJAG_04462","SJAG_03705","SJAG_04771","SJAG_01787","SJAG_04509","SJAG_01255","SJAG_00610","SJAG_02278","SJAG_00424","SJAG_04668","SJAG_04659","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79207,77530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[92762,87860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[88238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032951"},{"annotations":[118210,118337,91110,92746,106237,103159,105665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[103161,95277,92768,89781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving polysaccharides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_00963":null,"SJAG_01255":null,"SJAG_01376":null,"SJAG_01787":null,"SJAG_02278":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of polysaccharide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032881","terms_by_termid":{"GO:0032951":null,"GO:0045719":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0140964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of auxin within a cell.","definition_xrefs":["PMID:19506555","PMID:22314799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular auxin homeostasis","synonyms":[{"name":"auxin homeostasis","type":"broad"},{"name":"cellular auxin homeostasis","type":"exact"}],"termid":"GO:0140964"}


id: PBO:0109311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA oncogene in liver cancer 1","termid":"PBO:0109311"}


id: PBO:0058944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 3","termid":"PBO:0058944"}


id: PBO:0027988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_abnormal_septum_morphology,_enlarged_nucleus","termid":"PBO:0027988"}


id: GO:0004671
data:
  {"annotated_genes":["SJAG_05016"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75830],"is_not":false,"summary":null,"term":"GO:0004671"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + protein C-terminal S-farnesyl-L-cysteine = S-adenosyl-L-homocysteine + protein C-terminal S-farnesyl-L-cysteine methyl ester.","definition_xrefs":["EC:2.1.1.100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein C-terminal carboxyl O-methyltransferase activity","termid":"GO:0003880"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016740","GO:0008276","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0018225","RHEA:21672","MetaCyc:2.1.1.100-RXN","Reactome:R-HSA-9647977","KEGG_REACTION:R04496","Reactome:R-HSA-6788650"],"synonyms":[{"name":"S-adenosyl-L-methionine:protein-C-terminal-S-farnesyl-L-cysteine O-methyltransferase activity","type":"related"},{"name":"S-farnesylcysteine methyltransferase activity","type":"related"},{"name":"farnesyl cysteine C-terminal methyltransferase activity","type":"related"},{"name":"farnesyl-protein carboxymethyltransferase activity","type":"related"},{"name":"farnesylated protein C-terminal O-methyltransferase activity","type":"related"},{"name":"isoprenylated protein methyltransferase activity","type":"related"},{"name":"isoprenylcysteine carboxylmethyltransferase activity","type":"related"},{"name":"prenylated protein carboxyl methyltransferase activity","type":"related"},{"name":"prenylated protein methyltransferase activity","type":"related"},{"name":"prenylcysteine carboxyl methyltransferase activity","type":"related"},{"name":"prenylcysteine carboxylmethyltransferase activity","type":"related"},{"name":"prenylcysteine carboxymethyltransferase activity","type":"related"},{"name":"prenylcysteine methyltransferase activity","type":"related"},{"name":"protein C-terminal farnesylcysteine O-methyltransferase activity","type":"related"},{"name":"protein S-farnesylcysteine C-terminal methyltransferase activity","type":"related"},{"name":"protein-S-isoprenylcysteine O-methyltransferase activity","type":"exact"}],"termid":"GO:0004671","terms_by_termid":{"GO:0004671":null}}


id: MONDO:0008532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teeth present at birth","secondary_identifiers":["SCTID:21995002","MEDGEN:10268","UMLS:C0027443","HP:0000695","OMIM:187050"],"synonyms":[{"name":"Natal teeth","type":"related"},{"name":"teeth present AT birth","type":"related"},{"name":"teeth present at birth","type":"exact"},{"name":"teeth present at birth (disease)","type":"exact"}],"termid":"MONDO:0008532","xrefs":{"Monarch":{"xref_id":"0008532"}}}


id: PBO:0051954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor type 2","termid":"PBO:0051954"}


id: PBO:0031042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton_organization","termid":"PBO:0031042"}


id: GO:1901900
data:
  {"annotated_genes":["SJAG_03602","SJAG_02645","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[98754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"},{"annotations":[108264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905391"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell division site.","definition_xrefs":["PMID:22573892","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to cell division site","termid":"GO:0072741"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02645":null,"SJAG_03602":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell division site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to cell division site","type":"exact"}],"termid":"GO:1901900","terms_by_termid":{"GO:0120047":null,"GO:0140325":null,"GO:1905391":null}}


id: PBO:0005073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase delta subunit Swp1 (predicted)","termid":"PBO:0005073"}


id: GO:0007534
data:
  {"annotated_genes":["SJAG_01601","SJAG_03221","SJAG_01677","SJAG_03097","SJAG_01419","SJAG_02226","SJAG_01076","SJAG_02828","SJAG_02724","SJAG_01495","SJAG_02556","SJAG_02460","SJAG_00247","SJAG_02079","SJAG_05239"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88273,89506,89634,96508,97750,99443,100902,106389,106948,108825,110610,111132,115326,117101,119063],"is_not":false,"summary":null,"term":"GO:0007534"}]},"cv_name":"biological_process","definition":"The conversion of the mating-type locus from one allele to another resulting from the recombinational repair of a site-specific double-strand break at the mating-type locus with information from a silent donor sequence. There is no reciprocal exchange of information because the mating-type locus copies information from the donor sequence and the donor sequence remains unchanged.","definition_xrefs":["PMID:10716938","PMID:9928492","GOC:elh","PMID:7646483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic recombination","termid":"GO:0006312"},{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"},{"relation_name":"part_of","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_01076":null,"SJAG_01419":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"gene conversion at mating-type locus","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0010708","GO:0031292","GO:0000734","GO:0061500","GO:0034636","GO:0000728"],"synonyms":[{"name":"gene conversion at mating-type locus, DNA double-strand break formation","type":"narrow"},{"name":"gene conversion at mating-type locus, DNA double-strand break processing","type":"narrow"},{"name":"gene conversion at mating-type locus, DNA repair synthesis","type":"narrow"},{"name":"gene conversion at mating-type locus, termination of copy-synthesis","type":"narrow"},{"name":"heteroduplex formation involved in gene conversion at mating-type locus","type":"narrow"},{"name":"strand invasion involved in gene conversion at mating-type locus","type":"exact"}],"termid":"GO:0007534","terms_by_termid":{"GO:0007534":null}}


id: PBO:0039819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor GTPase activating protein 3","termid":"PBO:0039819"}


id: PBO:0076151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinyl-CoA:glutarate-CoA transferase","termid":"PBO:0076151"}


id: PBO:0062825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSGEPL1 antisense RNA 1","termid":"PBO:0062825"}


id: FYPO:0007448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the endoplasmic reticulum is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:32735772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"},{"relation_name":"is_a","term_name":"abnormal macroautophagy during nitrogen starvation","termid":"FYPO:0004670"},{"relation_name":"is_a","term_name":"abnormal reticulophagy","termid":"FYPO:0008083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"normal reticulophagy during nitrogen starvation","synonyms":[{"name":"normal ER autophagy during nitrogen starvation","type":"exact"},{"name":"normal ER degradation during nitrogen starvation","type":"related"},{"name":"normal ER-phagy during nitrogen starvation","type":"exact"},{"name":"normal endoplasmic reticulum autophagy during nitrogen starvation","type":"exact"},{"name":"normal reticulophagy during nitrogen depletion","type":"exact"},{"name":"normal reticulophagy during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0007448"}


id: PBO:0049368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 2B","termid":"PBO:0049368"}


id: GO:0006696
data:
  {"annotated_genes":["SJAG_04810","SJAG_04499","SJAG_03235","SJAG_03598","SJAG_02982","SJAG_02719","SJAG_03929","SJAG_03018","SJAG_03715","SJAG_00453","SJAG_02855","SJAG_00770","SJAG_03531","SJAG_03024","SJAG_03750","SJAG_04270","SJAG_01474","SJAG_00717","SJAG_03509","SJAG_04217","SJAG_02104","SJAG_03249","SJAG_00370","SJAG_00413","SJAG_00624","SJAG_04018","SJAG_01307","SJAG_02044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65935,70213,71265,71905,72100,73512,74332,74690,76534,76592,76619,77564,80299,80659,80672,88815,90000,94973,107840,108152,109553,110392,115536,116843],"is_not":false,"summary":null,"term":"GO:0006696"},{"annotations":[94223],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[110157],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[106162,88905],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ergosterol, (22E)-ergosta-5,7,22-trien-3-beta-ol, a sterol found in ergot, yeast and moulds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ergosterol metabolic process","termid":"GO:0008204"},{"relation_name":"is_a","term_name":"sterol biosynthetic process","termid":"GO:0016126"},{"relation_name":"is_a","term_name":"phytosteroid biosynthetic process","termid":"GO:0016129"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"ergosterol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"ergosterol anabolism","type":"exact"},{"name":"ergosterol biosynthesis","type":"exact"},{"name":"ergosterol formation","type":"exact"},{"name":"ergosterol synthesis","type":"exact"}],"termid":"GO:0006696","terms_by_termid":{"GO:0006696":null,"GO:0010895":null,"GO:0032443":null,"GO:0070452":null}}


id: GO:0051172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving nitrogen or nitrogenous compounds.","definition_xrefs":["GOC:ai","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nitrogen compound metabolic process (obsolete GO:0051172)","termid":"GO:0051172"}


id: MONDO:0004008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A breast lesion characterized by the presence of dilated terminal ductal lobular units in which the epithelial lining has been replaced by a single layer of mildly atypical cells, or there is atypical, monotonous epithelial hyperplasia of three to five layers. This lesion relates to columnar cell change with atypia and columnar cell hyperplasia with atypia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast intraductal proliferative lesion","termid":"MONDO:0004007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flat ductal epithelial atypia","secondary_identifiers":["DOID:6841","UMLS:C1333620","MEDGEN:232508","NCIT:C36086"],"synonyms":[{"name":"DIN 1A","type":"exact"},{"name":"FEA","type":"exact"},{"name":"clinging carcinoma","type":"exact"},{"name":"ductal intraepithelial neoplasia, grade 1A","type":"exact"},{"name":"flat ductal epithelial atypia","type":"exact"},{"name":"flat ductal epithelial atypia of the breast","type":"exact"},{"name":"flat epithelial atypia","type":"exact"},{"name":"flat epithelial atypia of the breast","type":"exact"}],"termid":"MONDO:0004008","xrefs":{"Monarch":{"xref_id":"0004008"}}}


id: PBO:0056054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LUC7 like 3 pre-mRNA splicing factor pseudogene 1","termid":"PBO:0056054"}


id: PBO:0057700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1288","termid":"PBO:0057700"}


id: PBO:0048800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNAS antisense RNA 1","termid":"PBO:0048800"}


id: GO:0032701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-18 production.","definition_xrefs":["GOC:mah","PMID:23710316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-18 production","termid":"GO:0032661"},{"relation_name":"negatively_regulates","term_name":"interleukin-18 production","termid":"GO:0032621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-18 production","secondary_identifiers":["GO:0045382","GO:0150121"],"synonyms":[{"name":"down regulation of interleukin-18 production","type":"exact"},{"name":"down-regulation of interleukin-18 production","type":"exact"},{"name":"downregulation of interleukin-18 production","type":"exact"},{"name":"inhibition of interleukin-18 production","type":"narrow"},{"name":"negative regulation of IL-18 production","type":"exact"},{"name":"negative regulation of interleukin-18 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-18 secretion","type":"narrow"}],"termid":"GO:0032701"}


id: PR:G2TRM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4H3.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4H3.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.17","synonyms":[{"name":"Spom972h-SPAC4H3.17","type":"exact"}],"termid":"PR:G2TRM9"}


id: GO:0061178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of insulin that contributes to the response of a cell to glucose.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of insulin secretion","termid":"GO:0050796"},{"relation_name":"regulates","term_name":"insulin secretion involved in cellular response to glucose stimulus","termid":"GO:0035773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of insulin secretion involved in cellular response to glucose stimulus","synonyms":[{"name":"regulation of insulin secretion in response to glucose","type":"exact"}],"termid":"GO:0061178"}


id: MONDO:0019486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myoclonic epilepsy of infancy (obsolete MONDO:0019486)","termid":"MONDO:0019486","xrefs":{"Monarch":{"xref_id":"0019486"}}}


id: PBO:0004490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding complex small subunit (predicted)","termid":"PBO:0004490"}


id: PBO:0036142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_iron","termid":"PBO:0036142"}


id: MONDO:0008941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, syndromic intellectual disability characterized by early developmental delay with failure to thrive, intellectual disability, congenital hepatic fibrosis, renal cystic dysplasia, and dysmorphic facial features (bilateral ptosis, anteverted nostrils, high arched palate, and micrognathia). Variable additional features have been reported, including cerebellar anomalies, postaxial polydactyly, syndactyly, genital anomalies, tachypnea. There have been no further descriptions in the literature since 1987.","definition_xrefs":["Orphanet:2031"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary parenchymatous liver disease (obsolete MONDO:0015508)","termid":"MONDO:0015508"},{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic fibrosis-renal cysts-intellectual disability syndrome","secondary_identifiers":["UMLS:C1859300","GARD:5177","OMIM:213010","MEDGEN:347120","MESH:C565867"],"synonyms":[{"name":"Thompson Baraitser syndrome","type":"exact"},{"name":"Thompson-Baraitser syndrome","type":"exact"},{"name":"cerebellar vermis aplasia with associated features suggesting SMITH-Lemli-Opitz syndrome and Meckel syndrome","type":"related"}],"termid":"MONDO:0008941","xrefs":{"Monarch":{"xref_id":"0008941"}}}


id: PBO:0033807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-telomeric_regions_absent_from_linear_chromosomes","termid":"PBO:0033807"}


id: MONDO:0009808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small, benign, bone-forming neoplasm that can arise from any bone but more frequently affects the long bones. The central portion of the neoplasm (nidus) contains differentiated osteoblasts which produce osteoid and sometimes bone. The lesion is usually surrounded by hypervascular sclerotic bone and has limited growth potential. Clinical signs and symptoms include pain and localized tenderness, at the site of the lesion. The pain may be intense but in the majority of cases it is completely alleviated by non-steroidal anti-inflammatory drugs. Prognosis is excellent and recurrences are rare.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"benign osteogenic neoplasm","termid":"MONDO:0045052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoid osteoma","secondary_identifiers":["MESH:D010017","MEDGEN:18221","UMLS:C0029441","ICDO:9191/0","HP:0030433","NCIT:C3297","OMIM:259550","SCTID:302859004"],"synonyms":[{"name":"osteoid osteoma","type":"exact"},{"name":"osteoid osteoma (disease)","type":"exact"}],"termid":"MONDO:0009808","xrefs":{"Monarch":{"xref_id":"0009808"}}}


id: MONDO:0010299
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86519],"is_not":false,"summary":null,"term":"MONDO:0010299"}]},"cv_name":"mondo","definition":"Kelley-Seegmiller syndrome (KSS) is the mildest form of hypoxanthine-guanine phosphoribosyltransferase (HPRT) deficiency, a hereditary disorder of purine metabolism, and is associated with uric acid overproduction (UAO) leading to urolithiasis, and early-onset gout.","definition_xrefs":["Orphanet:79233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoxanthine-guanine phosphoribosyltransferase deficiency","termid":"MONDO:0016088"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005066"],"is_obsolete":false,"name":"hypoxanthine guanine phosphoribosyltransferase partial deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C562583","OMIM:300323","MEDGEN:82770","SCTID:238007004","DOID:0112127","ICD9:277.2","UMLS:C0268117","GARD:16710"],"synonyms":[{"name":"HPRT deficiency, grade I","type":"exact"},{"name":"HPRT deficiency, partial","type":"related"},{"name":"HPRT partial deficiency","type":"exact"},{"name":"HPRT-related gout","type":"exact"},{"name":"HPRT-related hyperuricemia","type":"exact"},{"name":"HPRT1 partial deficiency","type":"exact"},{"name":"Hprt1 deficiency, partial","type":"related"},{"name":"KELLEY-Seegmiller syndrome","type":"related"},{"name":"Kelley-Seegmiller syndrome","type":"exact"},{"name":"gout, HPRT-related","type":"related"},{"name":"hyperuricemia, HRPT-related, X-linked recessive","type":"exact"},{"name":"hypoxanthine guanine phosphoribosyltransferase 1 deficiency, partial","type":"related"},{"name":"hypoxanthine guanine phosphoribosyltransferase 1 partial deficiency","type":"exact"},{"name":"hypoxanthine guanine phosphoribosyltransferase deficiency, grade I","type":"exact"}],"termid":"MONDO:0010299","terms_by_termid":{"MONDO:0010299":null},"xrefs":{"Monarch":{"xref_id":"0010299"}}}


id: PBO:0064940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAC1 small nuclear protein","termid":"PBO:0064940"}


id: MONDO:0029142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 111","secondary_identifiers":["OMIM:618145","MEDGEN:1648423","UMLS:C4748374","GARD:22659","DOID:0111640"],"synonyms":[{"name":"DFNB111","type":"narrow"},{"name":"deafness, autosomal recessive 111","type":"narrow"}],"termid":"MONDO:0029142","xrefs":{"Monarch":{"xref_id":"0029142"}}}


id: MONDO:0006027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A synovial sarcoma (disease) that involves the breast.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast sarcoma","termid":"MONDO:0002490"},{"relation_name":"is_a","term_name":"synovial sarcoma","termid":"MONDO:0010434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast synovial sarcoma","synonyms":[{"name":"breast synovial sarcoma (disease)","type":"exact"}],"termid":"MONDO:0006027","xrefs":{"Monarch":{"xref_id":"0006027"}}}


id: PBO:0031306
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_cell","termid":"PBO:0031306"}


id: GO:1903380
data:
  {"annotated_genes":["SJAG_03048","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102694,116977],"is_not":false,"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic chromosome condensation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:9490640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of mitotic chromosome condensation","termid":"GO:1903379"},{"relation_name":"is_a","term_name":"positive regulation of chromosome condensation","termid":"GO:1905821"},{"relation_name":"positively_regulates","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic chromosome condensation","type":"narrow"},{"name":"up regulation of mitotic chromosome condensation","type":"exact"},{"name":"up-regulation of mitotic chromosome condensation","type":"exact"},{"name":"upregulation of mitotic chromosome condensation","type":"exact"}],"termid":"GO:1903380","terms_by_termid":{"GO:1903380":null}}


id: GO:0052836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol pentakisphosphate = ADP + 5-triphospho-1D-myo-inositol pentakisphosphate.","definition_xrefs":["PMID:11502751","PMID:18355727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"inositol 5-diphosphate pentakisphosphate 5-kinase activity","secondary_identifiers":["Reactome:R-HSA-1855224","Reactome:R-HSA-1855158"],"termid":"GO:0052836"}


id: GO:0004774
data:
  {"annotated_genes":["SJAG_01524","SJAG_03813"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75695,72103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004775"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate + CoA + nucleotide triphosphate = nucleotide diphosphate + phosphate + succinyl-CoA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"succinate-CoA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0004774","terms_by_termid":{"GO:0004775":null}}


id: PBO:0090518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase complex I TFIIS subunit Rpa12","termid":"PBO:0090518"}


id: PBO:0004080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin","termid":"PBO:0004080"}


id: PBO:0078462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotropin releasing hormone","termid":"PBO:0078462"}


id: PBO:0082623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of both the Rpd3S and Rpd3L histone deacetylase complexes; negative regulator of meiosis; required for repression of a subset of meiotic genes during vegetative growth, binding of histone deacetylase Rpd3p required for activity, contains a NEE box and a WD repeat motif; homologous with Wtm1p; UME1 has a paralog, WTM2, that arose from the whole genome duplication","termid":"PBO:0082623"}


id: MONDO:1011203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis with gingival hamartomas that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis with gingival hamartomas, non-human animal","termid":"MONDO:1010312"},{"relation_name":"is_a","term_name":"osteopetrosis, cattle","termid":"MONDO:1011181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis with gingival hamartomas, cattle","secondary_identifiers":["OMIA:001887-9913"],"termid":"MONDO:1011203","xrefs":{"Monarch":{"xref_id":"1011203"}}}


id: GO:0042174
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042173"},{"relation_name":"is_a","term_name":"negative regulation of sporulation","termid":"GO:0043939"},{"relation_name":"negatively_regulates","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of sporulation","type":"exact"},{"name":"down-regulation of sporulation","type":"exact"},{"name":"downregulation of sporulation","type":"exact"},{"name":"inhibition of sporulation","type":"narrow"}],"termid":"GO:0042174","terms_by_termid":{"GO:0075297":null}}


id: PBO:0038744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 3","termid":"PBO:0038744"}


id: PBO:0047175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 8","termid":"PBO:0047175"}


id: PBO:0004527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear element associated protein Hop1","termid":"PBO:0004527"}


id: PBO:0071396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 2","termid":"PBO:0071396"}


id: PATO:0001007
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001007 relative latency (obsolete PATO:0001007)","termid":"PATO:0001007"}


id: PBO:0060585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 22, pseudogene","termid":"PBO:0060585"}


id: MONDO:0035875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ivermectin toxicity","secondary_identifiers":["Orphanet:574637"],"termid":"MONDO:0035875","xrefs":{"Monarch":{"xref_id":"0035875"}}}


id: PBO:0061671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 54","termid":"PBO:0061671"}


id: MONDO:0015362
data:
  {"annotated_genes":["SJAG_01522","SJAG_01352","SJAG_02695","SJAG_05289","SJAG_01537","SJAG_04567","SJAG_02919","SJAG_03815"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010043"},{"annotations":[86371,86372,86373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008025"},{"annotations":[86982,86983,86981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012080"},{"annotations":[86667,86665,86666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013243"},{"annotations":[85674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015353"},{"annotations":[86521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013884"},{"annotations":[86051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030860"},{"annotations":[86546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011879"},{"annotations":[85577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060585"}]},"cv_name":"mondo","definition":"Autosomal dominant form of distal hereditary motor neuropathy.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"is_a","term_name":"distal hereditary motor neuropathy","termid":"MONDO:0018894"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01352":null,"SJAG_01522":null,"SJAG_01537":null,"SJAG_02695":null,"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244","MONDO:0000426"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5548212","DOID:0111198","OMIMPS:182960","Orphanet:140465","MEDGEN:1787720","GARD:19926"],"synonyms":[{"name":"autosomal dominant dHMN","type":"exact"},{"name":"autosomal dominant distal hereditary motor neuropathy","type":"exact"},{"name":"autosomal dominant distal spinal muscular atrophy","type":"exact"},{"name":"distal hereditary motor neuropathy, autosomal dominant","type":"exact"}],"termid":"MONDO:0015362","terms_by_termid":{"MONDO:0008025":null,"MONDO:0010043":null,"MONDO:0011879":null,"MONDO:0012080":null,"MONDO:0013243":null,"MONDO:0013884":null,"MONDO:0015353":null,"MONDO:0030860":null,"MONDO:0060585":null},"xrefs":{"Monarch":{"xref_id":"0015362"}}}


id: MONDO:0012925
data:
  {"annotated_genes":["SJAG_00166","SJAG_04414"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87104,87105],"is_not":false,"summary":null,"term":"MONDO:0012925"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the RPL35A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00166":null,"SJAG_04414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:612528","UMLS:C2675859","NCIT:C176914","MEDGEN:382705","GARD:15562","DOID:0111883","MESH:C567280"],"synonyms":[{"name":"DBA5","type":"related"},{"name":"Diamond-Blackfan Anaemia type 5","type":"exact"},{"name":"Diamond-Blackfan Anemia type 5","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in RPL35A","type":"exact"},{"name":"Diamond-Blackfan anemia 5","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in RPL35A","type":"exact"},{"name":"RPL35A Diamond-Blackfan anaemia","type":"exact"},{"name":"RPL35A Diamond-Blackfan anemia","type":"exact"}],"termid":"MONDO:0012925","terms_by_termid":{"MONDO:0012925":null},"xrefs":{"Monarch":{"xref_id":"0012925"}}}


id: GO:2000171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of dendrite development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron projection development","termid":"GO:0010977"},{"relation_name":"is_a","term_name":"regulation of dendrite development","termid":"GO:0050773"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"dendrite development","termid":"GO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendrite development","termid":"GO:2000171"}


id: PBO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-fructofuranosidase (predicted)","termid":"PBO:0002028"}


id: PBO:0081765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 696","termid":"PBO:0081765"}


id: MONDO:0015475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare head and neck malformation (obsolete MONDO:0015475)","secondary_identifiers":["Orphanet:155832"],"termid":"MONDO:0015475","xrefs":{"Monarch":{"xref_id":"0015475"}}}


id: GO:0008840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + L-aspartate-4-semialdehyde = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H2O.","definition_xrefs":["RHEA:34171","PMID:8993314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxy-tetrahydrodipicolinate synthase activity","secondary_identifiers":["EC:4.3.3.7","KEGG_REACTION:R02292","MetaCyc:DIHYDRODIPICSYN-RXN"],"synonyms":[{"name":"DHDPS activity","type":"related"},{"name":"L-aspartate-4-semialdehyde hydro-lyase (adding pyruvate and cyclizing)","type":"related"},{"name":"L-aspartate-4-semialdehyde hydro-lyase [adding pyruvate and cyclizing; (S)-2,3-dihydropyridine-2,6-dicarboxylate-forming]","type":"related"},{"name":"dihydrodipicolinate synthase activity","type":"exact"},{"name":"dihydrodipicolinate synthetase activity","type":"related"},{"name":"dihydrodipicolinic acid synthase activity","type":"related"}],"termid":"GO:0008840"}


id: PBO:0054440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1837","termid":"PBO:0054440"}


id: PBO:0078791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 14-1","termid":"PBO:0078791"}


id: PBO:0080565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and coiled coil containing","termid":"PBO:0080565"}


id: GO:0071129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to lipid phosphate phosphohydrolase-3.","definition_xrefs":["PMID:16099422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphaV-beta3 integrin-LPP3 complex","synonyms":[{"name":"ITGAV-ITGB3-PPAP2B complex","type":"narrow"}],"termid":"GO:0071129"}


id: FYPO:0001737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of pantothenate into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal pantothenate import","synonyms":[{"name":"abnormal pantothenate import across plasma membrane","type":"exact"},{"name":"abnormal pantothenate import during mitotic cell cycle","type":"related"},{"name":"abnormal pantothenate import during vegetative growth","type":"exact"},{"name":"abnormal pantothenate import into cell","type":"exact"},{"name":"abnormal pantothenate uptake","type":"exact"},{"name":"abnormal pantothenic acid import","type":"related"}],"termid":"FYPO:0001737"}


id: PBO:0061916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 4","termid":"PBO:0061916"}


id: GO:0050518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-C-methyl-D-erythritol 4-phosphate + CTP = 4-CDP-2-C-methyl-D-erythritol + diphosphate.","definition_xrefs":["EC:2.7.7.60","RHEA:13429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05633","GO:0008699","MetaCyc:2.7.7.60-RXN"],"synonyms":[{"name":"4-diphosphocytidyl-2-C-methyl-D-erythritol synthase activity","type":"related"},{"name":"4-diphosphocytidyl-2C-methyl-D-erythritol synthase activity","type":"exact"},{"name":"CTP:2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity","type":"exact"},{"name":"MCT activity","type":"related"},{"name":"MEP cytidylyltransferase activity","type":"exact"}],"termid":"GO:0050518"}


id: PBO:0072381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 7","termid":"PBO:0072381"}


id: FYPO:0000303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population undergoes conjugation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased conjugation frequency","synonyms":[{"name":"decreased conjugation efficiency","type":"related"},{"name":"decreased mating frequency","type":"exact"},{"name":"decreased occurrence of mating","type":"exact"},{"name":"reduced conjugation efficiency","type":"related"},{"name":"reduced conjugation frequency","type":"exact"},{"name":"reduced zygote formation","type":"related"}],"termid":"FYPO:0000303"}


id: PBO:0005867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-specific polypeptide Pc","termid":"PBO:0005867"}


id: GO:0102640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: paspalicine + O2 + NADPH + H+ = paspalinine + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete paspalinine synthase activity (obsolete GO:0102640)","termid":"GO:0102640"}


id: PBO:0077527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 241","termid":"PBO:0077527"}


id: PBO:0091720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein,human RPAP3 ortholog","termid":"PBO:0091720"}


id: MONDO:0041850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial pneumonia","termid":"MONDO:0004652"},{"relation_name":"is_a","term_name":"gram-negative bacterial infections","termid":"MONDO:0021678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia caused by gram negative bacteria","secondary_identifiers":["SCTID:430395005","MEDGEN:678525","UMLS:C0854248"],"synonyms":[{"name":"gram negative pneumonia","type":"related"},{"name":"gramme negative pneumonia","type":"related"},{"name":"pneumonia caused by gram negative bacteria","type":"exact"},{"name":"pneumonia caused by gram-negative bacteria","type":"related"},{"name":"pneumonia due to gram negative bacteria","type":"exact"},{"name":"pneumonia due to gram-negative bacteria","type":"related"},{"name":"pneumonia due to gramme negative bacteria","type":"exact"}],"termid":"MONDO:0041850","xrefs":{"Monarch":{"xref_id":"0041850"}}}


id: GO:0001914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of T cell mediated cytotoxicity.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated cytotoxicity","termid":"GO:0001910"},{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"regulates","term_name":"T cell mediated cytotoxicity","termid":"GO:0001913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell mediated cytotoxicity","synonyms":[{"name":"regulation of T cell mediated apoptosis","type":"exact"},{"name":"regulation of T cell mediated cell death","type":"exact"},{"name":"regulation of T cell mediated cell killing","type":"exact"},{"name":"regulation of T cell mediated cytolysis","type":"related"},{"name":"regulation of T lymphocyte mediated cytotoxicity","type":"exact"},{"name":"regulation of T-cell mediated apoptosis","type":"exact"},{"name":"regulation of T-cell mediated cell death","type":"exact"},{"name":"regulation of T-cell mediated cell killing","type":"exact"},{"name":"regulation of T-cell mediated cytolysis","type":"related"},{"name":"regulation of T-cell mediated cytotoxicity","type":"exact"},{"name":"regulation of T-lymphocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001914"}


id: PBO:0061317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member A2","termid":"PBO:0061317"}


id: PBO:0065925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB, member RAS oncogene family like 6","termid":"PBO:0065925"}


id: GO:0001518
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sodium channel in a cell membrane whose opening is governed by the membrane potential.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium channel complex","termid":"GO:0034706"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"voltage-gated sodium channel complex","secondary_identifiers":["NIF_Subcellular:sao785001660"],"synonyms":[{"name":"voltage gated sodium channel complex","type":"exact"},{"name":"voltage-dependent sodium channel complex","type":"exact"},{"name":"voltage-sensitive sodium channel complex","type":"exact"}],"termid":"GO:0001518"}


id: PBO:0015700
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kcat/Km 2.3x10^4 min-1 M-1","termid":"PBO:0015700"}


id: MONDO:1010082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Evans syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thrombocytopenia, non-human animal","termid":"MONDO:1010069"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"autoimmune hemolytic anemia, non-human animal","termid":"MONDO:1011406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evans syndrome, non-human animal","secondary_identifiers":["OMIA:001286"],"termid":"MONDO:1010082","xrefs":{"Monarch":{"xref_id":"1010082"}}}


