# terms

id: MONDO:0017642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-microcephaly-phalangeal-facial abnormalities syndrome","secondary_identifiers":["Orphanet:3067"],"termid":"MONDO:0017642","xrefs":{"Monarch":{"xref_id":"0017642"}}}


id: GO:0015640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of peptidoglycan peptides from one side of a membrane to the other. Peptidoglycan peptides are the oligopeptides found in peptidoglycan networks which cross-link the polysaccharide chains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan transmembrane transporter activity","termid":"GO:0015647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"peptidoglycan peptide transmembrane transporter activity","synonyms":[{"name":"murein peptide transporter activity","type":"exact"},{"name":"muropeptide transporter activity","type":"exact"}],"termid":"GO:0015640"}


id: PBO:0048075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 26","termid":"PBO:0048075"}


id: MONDO:0020620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group, ss (obsolete MONDO:0020620)","secondary_identifiers":["OMIM:111740"],"synonyms":[{"name":"BLOOD GROUP, Ss","type":"related"},{"name":"Ss","type":"related"},{"name":"Ss Blood Group","type":"related"},{"name":"blood group, Ss","type":"exact"}],"termid":"MONDO:0020620","xrefs":{"Monarch":{"xref_id":"0020620"}}}


id: MONDO:0013861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyotrophic lateral sclerosis type 17 (obsolete MONDO:0013861)","termid":"MONDO:0013861","xrefs":{"Monarch":{"xref_id":"0013861"}}}


id: GO:0061227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the mesonephros to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification involved in mesonephros development","synonyms":[{"name":"mesonephros pattern formation","type":"related"},{"name":"mesonephros pattern specification","type":"exact"}],"termid":"GO:0061227"}


id: GO:0008965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoenolpyruvate + protein L-histidine = pyruvate + protein N(pi)-phospho-L-histidine.","definition_xrefs":["EC:2.7.3.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphoenolpyruvate-protein phosphotransferase activity","secondary_identifiers":["RHEA:23880","MetaCyc:2.7.3.9-RXN"],"synonyms":[{"name":"enzyme I of the phosphotransferase system","type":"narrow"},{"name":"phosphoenolpyruvate sugar phosphotransferase enzyme I activity","type":"related"},{"name":"phosphoenolpyruvate--protein phosphatase activity","type":"related"},{"name":"phosphoenolpyruvate:protein-L-histidine N-pros-phosphotransferase activity","type":"related"},{"name":"phosphoenolpyruvate:protein-L-histidine Npi-phosphotransferase activity","type":"related"},{"name":"phosphopyruvate--protein factor phosphotransferase activity","type":"related"},{"name":"phosphopyruvate--protein phosphotransferase activity","type":"related"},{"name":"sugar--PEP phosphotransferase enzyme I activity","type":"narrow"}],"termid":"GO:0008965"}


id: PBO:0029862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_tyrosine_phosphorylation","termid":"PBO:0029862"}


id: PBO:0031491
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_spindle","termid":"PBO:0031491"}


id: PBO:0085189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two type I myosin motors; contains proline-rich tail homology 2 (TH2) and SH3 domains; MYO5 deletion has little effect on growth, but myo3 myo5 double deletion causes severe defects in growth and actin cytoskeleton organization; MYO5 has a paralog, MYO3, that arose from the whole genome duplication","termid":"PBO:0085189"}


id: PBO:0038420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A1BG antisense RNA 1","termid":"PBO:0038420"}


id: GO:0034285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disaccharide stimulus.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to disaccharide","synonyms":[{"name":"response to disaccharide stimulus","type":"exact"}],"termid":"GO:0034285"}


id: MOD:00884
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-2-aminoethylcysteine.","definition_xrefs":["PubMed:18688235","PubMed:1175632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-aminoethylcysteine (Cys)","synonyms":[{"name":"4-thialysine","type":"exact"},{"name":"L-cysteine aziridine adduct","type":"exact"},{"name":"S-(2-aminoethyl)-L-cysteine","type":"exact"}],"termid":"MOD:00884"}


id: PBO:0058871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9903","termid":"PBO:0058871"}


id: PBO:0088583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ketoreductase involved in fatty acid elongation","termid":"PBO:0088583"}


id: MONDO:0017281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal caliceal diverticuli-deafness syndrome","secondary_identifiers":["MEDGEN:1676118","UMLS:C5190738","GARD:4655","Orphanet:2838"],"termid":"MONDO:0017281","xrefs":{"Monarch":{"xref_id":"0017281"}}}


id: PR:Q10487
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter mfs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.16c","synonyms":[{"name":"Spom972h-mfs1","type":"exact"}],"termid":"PR:Q10487"}


id: PBO:0046005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF1B antisense RNA 1","termid":"PBO:0046005"}


id: GO:0045839
data:
  {"annotated_genes":["SJAG_01330","SJAG_02169","SJAG_04999","SJAG_01297","SJAG_02336","SJAG_01082","SJAG_02451","SJAG_01837","SJAG_03681","SJAG_00883","SJAG_04699","SJAG_04126","SJAG_03126","SJAG_04884","SJAG_01679","SJAG_04259","SJAG_03353"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114086,116202,91063,108563,99912,104208,114574,112268,107544],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[115859,99756,110213,102113,114804,106636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[94538],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[116976],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of mitosis. Mitosis is the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic nuclear division","termid":"GO:0007088"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"is_a","term_name":"negative regulation of nuclear division","termid":"GO:0051784"},{"relation_name":"negatively_regulates","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mitosis","type":"exact"},{"name":"down-regulation of mitosis","type":"exact"},{"name":"downregulation of mitosis","type":"exact"},{"name":"inhibition of mitosis","type":"narrow"},{"name":"negative regulation of mitosis","type":"exact"}],"termid":"GO:0045839","terms_by_termid":{"GO:0007094":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: GO:0034330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell junction. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell junction organization","synonyms":[{"name":"cell junction assembly and maintenance","type":"exact"},{"name":"cell junction biogenesis","type":"related"},{"name":"cell junction organisation","type":"exact"}],"termid":"GO:0034330"}


id: MOD:01386
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to 3-hydroxy-L-valine.","definition_xrefs":["RESID:AA0463","ChEBI:141793","PubMed:7328054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-L-valine","synonyms":[{"name":"(2S)-2-amino-3-hydroxy-3-methylbutanoic acid","type":"exact"},{"name":"3-hydroxy-L-valine","type":"exact"},{"name":"3-hydroxyvaline","type":"exact"},{"name":"3HyVal","type":"exact"},{"name":"MOD_RES 3-hydroxyvaline","type":"exact"}],"termid":"MOD:01386"}


id: PBO:0076394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adaptor 2A","termid":"PBO:0076394"}


id: MONDO:0020185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eyebrow/eyelashes hypertrichosis (obsolete MONDO:0020185)","secondary_identifiers":["Orphanet:98595"],"termid":"MONDO:0020185","xrefs":{"Monarch":{"xref_id":"0020185"}}}


id: PBO:0063453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 10A","termid":"PBO:0063453"}


id: MONDO:0018708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tongue squamous cell carcinoma","termid":"MONDO:0000500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"squamous cell carcinoma of the oral tongue","secondary_identifiers":["NCIT:C8169","Orphanet:457252"],"synonyms":[{"name":"OTSCC","type":"exact"},{"name":"oral tongue squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0018708","xrefs":{"Monarch":{"xref_id":"0018708"}}}


id: PBO:0049467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase 1","termid":"PBO:0049467"}


id: PBO:0047331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamin binding LIM protein 1","termid":"PBO:0047331"}


id: GO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of serotonin following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:16730260","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"serotonin production involved in inflammatory response","synonyms":[{"name":"serotonin production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002351"}


id: GO:0062093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective autophagy process in which a damaged lysosome is degraded by macroautophagy.","definition_xrefs":["PMID:28743755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"lysophagy","termid":"GO:0062093"}


id: GO:0061331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population and contributing to the shaping of a Malpighian tubule.","definition_xrefs":["PMID:19783135","GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation involved in renal tubule morphogenesis","termid":"GO:2001013"},{"relation_name":"part_of","term_name":"Malpighian tubule morphogenesis","termid":"GO:0007443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in Malpighian tubule morphogenesis","termid":"GO:0061331"}


id: PBO:0119283
data:
  {"annotated_genes":["SJAG_04697"],"annotation_feature_type":"gene","cv_annotations":{"pombase_family_or_domain":[{"annotations":[56275],"is_not":false,"summary":null,"term":"PBO:0119283"}]},"cv_name":"pombase_family_or_domain","gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":0,"is_obsolete":false,"name":"warning frameshifted","termid":"PBO:0119283","terms_by_termid":{"PBO:0119283":null}}


id: PBO:0072165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 2","termid":"PBO:0072165"}


id: PBO:0060105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 6","termid":"PBO:0060105"}


id: GO:0042720
data:
  {"annotated_genes":["SJAG_02809","SJAG_03648"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77197,80327],"is_not":false,"summary":null,"term":"GO:0042720"}]},"cv_name":"cellular_component","definition":"Protease complex of the mitochondrial inner membrane, consisting of at least two subunits, involved in processing of both nuclear- and mitochondrially-encoded proteins targeted to the intermembrane space.","definition_xrefs":["PMID:10821182","PMID:12191769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"is_a","term_name":"serine-type endopeptidase complex","termid":"GO:1905370"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02809":null,"SJAG_03648":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"mitochondrial inner membrane peptidase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"IMP","type":"narrow"},{"name":"mitochondrion inner membrane peptidase complex","type":"exact"}],"termid":"GO:0042720","terms_by_termid":{"GO:0042720":null}}


id: GO:0065009
data:
  {"annotated_genes":["SJAG_03088","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95626,105471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a molecular function, an elemental biological activity occurring at the molecular level, such as catalysis or binding.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of molecular function","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of a molecular function","type":"exact"}],"termid":"GO:0065009","terms_by_termid":{"GO:1904530":null}}


id: MONDO:0013095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioma susceptibility 6","secondary_identifiers":["UMLS:C2751639","MEDGEN:414429","OMIM:613031"],"synonyms":[{"name":"GLM6","type":"exact"},{"name":"glioma susceptibility 6","type":"exact"}],"termid":"MONDO:0013095","xrefs":{"Monarch":{"xref_id":"0013095"}}}


id: GO:0018888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-chloroacrylic acid, ClHC=CHCOOH, a chlorinated derivative of acrylic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-chloroacrylic acid metabolic process","secondary_identifiers":["UM-BBD_pathwayID:caa"],"synonyms":[{"name":"3-chloroacrylic acid metabolism","type":"exact"}],"termid":"GO:0018888"}


id: PBO:0048320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 31","termid":"PBO:0048320"}


id: PBO:0067450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 573, pseudogene","termid":"PBO:0067450"}


id: PBO:0075387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP2 antisense RNA 1","termid":"PBO:0075387"}


id: MOD:00749
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a sulfur atom for an oxygen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur substitution for oxygen","synonyms":[{"name":"S(O)Res","type":"exact"}],"termid":"MOD:00749"}


id: PBO:0056711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 3","termid":"PBO:0056711"}


id: GO:1903507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of nucleic acid-templated transcription.","definition_xrefs":["GOC:txnOH","GO_REF:0000058","GOC:pr","GOC:vw","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nucleic acid-templated transcription (obsolete GO:1903507)","synonyms":[{"name":"down regulation of nucleic acid-templated transcription","type":"exact"},{"name":"down-regulation of nucleic acid-templated transcription","type":"exact"},{"name":"downregulation of nucleic acid-templated transcription","type":"exact"},{"name":"inhibition of nucleic acid-templated transcription","type":"narrow"}],"termid":"GO:1903507"}


id: GO:0032288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the wraps of cell membrane that constitute myelin are laid down around an axon in the central or peripheral nervous system.","definition_xrefs":["GOC:dph","GOC:tb","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"part_of","term_name":"myelination","termid":"GO:0042552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"myelin assembly","synonyms":[{"name":"myelin formation","type":"related"},{"name":"myelin sheath assembly","type":"exact"}],"termid":"GO:0032288"}


id: SO:0001729
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 16th residue (a lysine), from the start of the H4 histone protein is acetylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_4_acetylation_site","termid":"SO:0001972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K16_acetylation_site","synonyms":[{"name":"H4K16 acetylation site","type":"exact"},{"name":"H4K16ac","type":"exact"}],"termid":"SO:0001729"}


id: GO:0018630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-hydroxytoluene + NADH + O2 = NAD+ + OH- + 3-hydroxybenzyl alcohol.","definition_xrefs":["UM-BBD_reactionID:r0081"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,5-xylenol methylhydroxylase activity (obsolete GO:0018630)","termid":"GO:0018630"}


id: PBO:0048402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAS6 divergent transcript","termid":"PBO:0048402"}


id: PBO:0047498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog C","termid":"PBO:0047498"}


id: PBO:0058159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4453 host gene","termid":"PBO:0058159"}


id: PBO:0072125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 2","termid":"PBO:0072125"}


id: PBO:0004712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tel2 interacting protein Tti2, predicted ASTRA complex subunit","termid":"PBO:0004712"}


id: MONDO:0022201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete has treatment by surgery (obsolete MONDO:0022201)","termid":"MONDO:0022201","xrefs":{"Monarch":{"xref_id":"0022201"}}}


id: GO:0007555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of ecdysteroid from a cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"ecdysteroid secretion","termid":"GO:0045457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ecdysteroid secretion","termid":"GO:0007555"}


id: PBO:0071541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 6","termid":"PBO:0071541"}


id: MONDO:0004954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malt lymphoma (obsolete MONDO:0004954)","termid":"MONDO:0004954","xrefs":{"Monarch":{"xref_id":"0004954"}}}


id: PBO:0057052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 138-1","termid":"PBO:0057052"}


id: PBO:0074083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A53 pseudogene 1","termid":"PBO:0074083"}


id: GO:0021701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Golgi cell. Differentiation includes the processes involved in commitment of a neuroblast to a Golgi cell fate. A cerebellar Golgi cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Golgi cell differentiation","termid":"GO:0021701"}


id: GO:2000795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell proliferation involved in lung morphogenesis.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:2000794"},{"relation_name":"negatively_regulates","term_name":"epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:2000795"}


id: FYPO:0004899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyruvate decarboxylase activity is decreased when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal pyruvate decarboxylase activity","termid":"FYPO:0004898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased pyruvate decarboxylase activity during stationary phase","synonyms":[{"name":"decreased pyruvate decarboxylase activity in stationary phase","type":"exact"},{"name":"reduced pyruvate decarboxylase activity during stationary phase","type":"exact"}],"termid":"FYPO:0004899"}


id: PBO:0042322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 molecule (Indian blood group)","termid":"PBO:0042322"}


id: GO:0050367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + L-tyrosine + ATP = L-tyrosyl-L-arginine + AMP + diphosphate + 2 H+.","definition_xrefs":["EC:6.3.2.24","RHEA:15345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"tyrosine-arginine ligase activity","secondary_identifiers":["MetaCyc:TYROSINE--ARGININE-LIGASE-RXN","KEGG_REACTION:R00735"],"synonyms":[{"name":"L-tyrosine:L-arginine ligase (AMP-forming)","type":"related"},{"name":"kyotorphin synthase activity","type":"related"},{"name":"kyotorphin synthetase activity","type":"related"},{"name":"kyotorphin-synthesizing enzyme activity","type":"related"},{"name":"tyrosyl-arginine synthase activity","type":"related"}],"termid":"GO:0050367"}


id: PBO:0064822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3D","termid":"PBO:0064822"}


id: PBO:0005636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine synthase Pps1","termid":"PBO:0005636"}


id: PBO:0091185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F0 subunit 9","termid":"PBO:0091185"}


id: PBO:0071679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 11","termid":"PBO:0071679"}


id: GO:1901193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of formation of translation preinitiation complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"regulates","term_name":"formation of translation preinitiation complex","termid":"GO:0001731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0002181","GO:0008150","GO:0044085","GO:0010467","GO:0065003"],"is_obsolete":false,"name":"regulation of formation of translation preinitiation complex","synonyms":[{"name":"regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"regulation of translation preinitiation complex assembly","type":"exact"}],"termid":"GO:1901193"}


id: PBO:0085388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane H+-pantothenate symporter; confers sensitivity to the antifungal agent fenpropimorph; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0085388"}


id: FYPO:0002231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that are curved along the long axis. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, curved cells (obsolete FYPO:0002231)","synonyms":[{"name":"inviable microcolony, curved vegetative cells","type":"exact"}],"termid":"FYPO:0002231"}


id: PBO:0086187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein serine/threonine phosphatase; regulates Hsp90 chaperone by affecting its ATPase and cochaperone binding activities; has similarity to human phosphatase PP5; present in both the nucleus and cytoplasm; expressed during logarithmic growth","termid":"PBO:0086187"}


id: PBO:0044321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 1","termid":"PBO:0044321"}


id: GO:0042195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid, in the presence of oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallate catabolic process","termid":"GO:0019396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aerobic gallate catabolic process","synonyms":[{"name":"aerobic gallate breakdown","type":"exact"},{"name":"aerobic gallate catabolism","type":"exact"},{"name":"aerobic gallate degradation","type":"exact"},{"name":"aerobic gallic acid catabolic process","type":"exact"},{"name":"aerobic gallic acid catabolism","type":"exact"}],"termid":"GO:0042195"}


id: PBO:0029088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tRNA_(guanine(9)-N(1))-methyltransferase_activity","termid":"PBO:0029088"}


id: PBO:0048030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascin actin-bundling protein 1 pseudogene 1","termid":"PBO:0048030"}


id: PBO:0080646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 95, pseudogene","termid":"PBO:0080646"}


id: _global:during_which_starts
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during_which_starts","secondary_identifiers":["RO:0002088"],"termid":"_global:during_which_starts"}


id: PBO:0076070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STRA6 like, pseudogene","termid":"PBO:0076070"}


id: PBO:0013087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prp43","termid":"PBO:0013087"}


id: PBO:0060287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 4","termid":"PBO:0060287"}


id: PBO:0087551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNase MRP; RNase MRP processes pre-rRNA and has a role in cell cycle-regulated degradation of daughter cell-specific mRNAs; unlike most subunits, not shared between RNase MRP and nuclear RNase P","termid":"PBO:0087551"}


id: PBO:0079378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 13","termid":"PBO:0079378"}


id: SO:0002282
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Terminal inverted repeat (TIR) transposons of the superfamily Transib contain the DDE motif, which is related to the RAG1 protein involved in V(D)J recombination.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transib_TIR_transposon","synonyms":[{"name":"DTR transposon","type":"exact"},{"name":"Transib TIR transposon","type":"exact"},{"name":"transib transposon","type":"exact"}],"termid":"SO:0002282"}


id: PBO:0051998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JARID2 antisense RNA 1","termid":"PBO:0051998"}


id: PBO:0088165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40 domain-containing protein involved in endosomal recycling; forms a complex with Rrt2p that functions in the retromer-mediated pathway for recycling internalized cell-surface proteins; interacts with Trm7p for 2'-O-methylation of N34 of substrate tRNAs; has a role in regulation of Ty1 transposition; human ortholog is WDR6","termid":"PBO:0088165"}


id: PBO:0069950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1243, pseudogene","termid":"PBO:0069950"}


id: GO:1904051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein targeting to vacuole involved in autophagy.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:pad","GOC:TermGenie","PMID:22020285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"is_a","term_name":"regulation of protein targeting","termid":"GO:1903533"},{"relation_name":"regulates","term_name":"protein targeting to vacuole involved in autophagy","termid":"GO:0071211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0006605","GO:0008150"],"is_obsolete":false,"name":"regulation of protein targeting to vacuole involved in autophagy","termid":"GO:1904051"}


id: GO:0005988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lactose, the disaccharide galactopyranosyl-glucose.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"lactose metabolic process","synonyms":[{"name":"lactose metabolism","type":"exact"}],"termid":"GO:0005988"}


id: PBO:0071722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 20","termid":"PBO:0071722"}


id: GO:0007434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination in an adult organism of where the salivary gland forms, the total number of salivary gland cells and how many cells are allocated to each of the specialised cell types within the salivary gland.","definition_xrefs":["GOC:tb","PMID:11598957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland boundary specification","termid":"GO:0007432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult salivary gland boundary specification","synonyms":[{"name":"larval salivary gland determination","type":"broad"}],"termid":"GO:0007434"}


id: PBO:0088919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT and tudor domain DNA checkpoint protein Crb2","termid":"PBO:0088919"}


id: GO:0046866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tetraterpenoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tetraterpenoids are terpenoids with eight isoprene units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"tetraterpenoid transport","termid":"GO:0046866"}


id: GO:0097155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The collection of sensory neuron axons into a bundle of rods, known as a fascicle.","definition_xrefs":["PMID:18403711","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonal fasciculation","termid":"GO:0007413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fasciculation of sensory neuron axon","termid":"GO:0097155"}


id: PBO:0047579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 2","termid":"PBO:0047579"}


id: PR:O14208
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bit2 gene.","definition_xrefs":["UniProtKB:O14208","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6B12.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.03c","synonyms":[{"name":"Spom972h-bit2","type":"exact"}],"termid":"PR:O14208"}


id: GO:0043043
data:
  {"annotated_genes":["SJAG_02599","SJAG_03494","SJAG_00988","SJAG_04031","SJAG_00792","SJAG_04032","SJAG_01351","SJAG_00469"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94450,105716,94443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[77681,57776,108744,79132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[94398],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide.","definition_xrefs":["GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03494":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9037628"],"synonyms":[{"name":"peptide anabolism","type":"exact"},{"name":"peptide biosynthesis","type":"exact"},{"name":"peptide formation","type":"exact"},{"name":"peptide synthesis","type":"exact"}],"termid":"GO:0043043","terms_by_termid":{"GO:0006750":null,"GO:0031169":null,"GO:1905569":null}}


id: GO:0048856
data:
  {"annotated_genes":["SJAG_03557","SJAG_04271","SJAG_00826","SJAG_03250","SJAG_04483","SJAG_02169","SJAG_03746","SJAG_04509","SJAG_04781","SJAG_01483","SJAG_04922","SJAG_04275","SJAG_03536","SJAG_03915","SJAG_01662","SJAG_04236","SJAG_02320","SJAG_00971","SJAG_04080","SJAG_02864","SJAG_00993","SJAG_02529","SJAG_00405","SJAG_02241","SJAG_05309","SJAG_03688","SJAG_00663","SJAG_00114","SJAG_01769","SJAG_04470","SJAG_04140","SJAG_03581","SJAG_04853","SJAG_01894","SJAG_04010","SJAG_00821","SJAG_03090","SJAG_00974","SJAG_04868","SJAG_01943","SJAG_03013","SJAG_01993","SJAG_01017","SJAG_01531","SJAG_00514","SJAG_04859","SJAG_00486","SJAG_01321","SJAG_02392","SJAG_03057","SJAG_03483","SJAG_02700","SJAG_04901","SJAG_04238","SJAG_02248","SJAG_02989","SJAG_02718","SJAG_04184","SJAG_03587","SJAG_04615","SJAG_02712"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90205,94916,96180],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[101047,105443,113017,96850,97266,111818],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[94358,111623],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[94802],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[88553,92110,89045,90588],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[73430],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[109380,104485,114387,118083,118091],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[105295,91841,73431],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[114235,118835,100225,97877,107695,97914,119135,119317,102025,95707,91631,105609,110422,99152],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[108026,104443,97200,103232,92632,100158,114236,107148,97878,100157],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[94359,88233],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042815"},{"annotations":[114626,98613,99222,99303,88600,92855],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[111507],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[91066],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[102605],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[91068],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[92529],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[94843,116273,100160,100440,106333,100159],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. 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id: MONDO:1010651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pelger-Huet anomaly that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pelger-Huet anomaly, non-human animal","termid":"MONDO:1010077"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pelger-Huet anomaly, domestic cat","secondary_identifiers":["OMIA:000783-9685"],"termid":"MONDO:1010651","xrefs":{"Monarch":{"xref_id":"1010651"}}}


id: PBO:0073408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 11","termid":"PBO:0073408"}


id: MONDO:0015903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant genetic condition caused by mutation(s) in the CETP gene, encoding cholesteryl ester transfer protein. Affected individuals may have increased longevity due to decreased risk of coronary heart disease.","definition_xrefs":["NCIT:C128806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperlipidemia","termid":"MONDO:0021187"},{"relation_name":"is_a","term_name":"hyperlipoproteinemia","termid":"MONDO:0037748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperalphalipoproteinemia","secondary_identifiers":["SCTID:238080004","MEDGEN:87465","UMLS:C0342883","GARD:20230","ICD9:272.4","Orphanet:181428","icd11.foundation:1599779547"],"synonyms":[{"name":"HALP1","type":"exact"}],"termid":"MONDO:0015903","xrefs":{"Monarch":{"xref_id":"0015903"}}}


id: PBO:0053930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1229","termid":"PBO:0053930"}


id: PBO:0036502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin Cdc31","termid":"PBO:0036502"}


id: GO:0102308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + erythromycin D = S-adenosyl-L-homocysteine + erythromycin B + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete erythromycin D 3''-o-methyltransferase activity (obsolete GO:0102308)","termid":"GO:0102308"}


id: PBO:0056288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MANEAL pseudogene 1","termid":"PBO:0056288"}


id: MONDO:0032867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic cancer, susceptibility to, 5","secondary_identifiers":["UMLS:C5231459","MEDGEN:1684838","OMIM:618680"],"synonyms":[{"name":"PANCREATIC CANCER, SUSCEPTIBILITY TO, 5","type":"related"},{"name":"PNCA5","type":"related"}],"termid":"MONDO:0032867","xrefs":{"Monarch":{"xref_id":"0032867"}}}


id: PBO:0061574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin 6 beta (pseudogene)","termid":"PBO:0061574"}


id: PBO:0076062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"storkhead box 2","termid":"PBO:0076062"}


id: MONDO:0014307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Dowling-Degos disease in which the cause of the disease is a mutation in the POGLUT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Dowling-Degos disease","termid":"MONDO:0008371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"Dowling-Degos disease 4","secondary_identifiers":["UMLS:C3810313","OMIM:615696","MEDGEN:816643","GARD:16002"],"synonyms":[{"name":"DDD4","type":"related"},{"name":"Dowling-Degos disease 4","type":"exact"},{"name":"Dowling-Degos disease caused by mutation in POGLUT1","type":"exact"},{"name":"Dowling-Degos disease type 4","type":"exact"},{"name":"POGLUT1 Dowling-Degos disease","type":"exact"}],"termid":"MONDO:0014307","xrefs":{"Monarch":{"xref_id":"0014307"}}}


id: MONDO:1010542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Protein-losing enteropathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-losing enteropathy, non-human animal","termid":"MONDO:1010042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-losing enteropathy, dog","secondary_identifiers":["OMIA:001325-9615"],"termid":"MONDO:1010542","xrefs":{"Monarch":{"xref_id":"1010542"}}}


id: MONDO:1010064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatomyositis characterized by the presence of anti-MDA5 autoantibodies. It is often associated with dermatomyositis rashes, amyopathic or hypomyopathic muscle involvement and interstitial lung disease, frequently as a rapid progressive course and high mortality.","definition_xrefs":["PMID:31279808","PMID:33405101"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"interstitial lung disease","termid":"MONDO:0015925"},{"relation_name":"is_a","term_name":"dermatomyositis","termid":"MONDO:0016367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005336"],"is_obsolete":false,"name":"anti-MDA5 dermatomyositis","synonyms":[{"name":"MDA-5 DM","type":"exact"},{"name":"MDA5+ DM","type":"exact"},{"name":"anti-melanoma differentiation-associated gene 5 dermatomyositis","type":"exact"},{"name":"clinically amyopathic dermatomyositis","type":"related"}],"termid":"MONDO:1010064","xrefs":{"Monarch":{"xref_id":"1010064"}}}


id: PBO:0083950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma subunit of the translation initiation factor eIF2; involved in the identification of the start codon; binds GTP when forming the ternary complex with GTP and tRNAi-Met; mutations in human ortholog cause X-linked intellectual disability (XLID) syndrome","termid":"PBO:0083950"}


id: MONDO:0016991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute necrotizing encephalopathy of childhood is a rare neurologic disease characterized by a rapid onset of seizures, an altered state of consciousness, neurologic decline, and variable degrees of hepatic dysfunction following a respiratory or gastrointesitnal infection (e.g. mycoplasma, influenza virus) in a previously healthy child. Brain MRI of patients reveals bilateral, multiple, symmetrical lesions predominantly observed in thalami and brainstem, but also in periventricular white matter and cerebellum in some cases.","definition_xrefs":["Orphanet:263524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious encephalitis","termid":"MONDO:0020067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute necrotizing encephalopathy of childhood","secondary_identifiers":["GARD:17257","SCTID:763310000","UMLS:C4706387","MEDGEN:1641610"],"synonyms":[{"name":"ANEC","type":"exact"},{"name":"isolated ANE","type":"exact"},{"name":"isolated acute necrotizing encephalopathy","type":"exact"}],"termid":"MONDO:0016991","xrefs":{"Monarch":{"xref_id":"0016991"}}}


id: PBO:0065967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 associated protein 2","termid":"PBO:0065967"}


id: GO:0009199
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  {"annotated_genes":["SJAG_02038","SJAG_00915","SJAG_00461","SJAG_02887","SJAG_01298","SJAG_03708","SJAG_05314","SJAG_04422","SJAG_02945","SJAG_02369","SJAG_07003","SJAG_03114","SJAG_00027","SJAG_05024","SJAG_MIT37","SJAG_05204","SJAG_03925","SJAG_MIT09","SJAG_02598","SJAG_03828","SJAG_02009","SJAG_04192","SJAG_02796","SJAG_00985","SJAG_04849","SJAG_04334","SJAG_01310","SJAG_02785","SJAG_00836","SJAG_00533","SJAG_00685","SJAG_00839","SJAG_00605","SJAG_00133","SJAG_00542","SJAG_03660","SJAG_00438","SJAG_04495","SJAG_02105","SJAG_01471","SJAG_04048","SJAG_02564","SJAG_02107","SJAG_03903","SJAG_MIT15","SJAG_04122","SJAG_00136","SJAG_02135","SJAG_03373","SJAG_03676","SJAG_06621","SJAG_06622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[67803,67722,59483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046034"},{"annotations":[105778,98590,109703,109700,103698,98318,109697,106147,109699,109702,109701,95352,105777,105776,109698,116652,103954,78210,94863,106146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[64617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[76820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[93312,68209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[88948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[75212,102554,64615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[73408,76377],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[118306],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[116147,94210,103995,105330,108210,95181,119361,89471,103349,93627,119367,109099,93196,102133,108118,103966,119373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[70420],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[64616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a ribonucleoside triphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate metabolic process","termid":"GO:0009141"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00438":null,"SJAG_00461":null,"SJAG_00533":null,"SJAG_00542":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00836":null,"SJAG_00839":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01310":null,"SJAG_01471":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02887":null,"SJAG_02945":null,"SJAG_03114":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03708":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03925":null,"SJAG_04048":null,"SJAG_04122":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04422":null,"SJAG_04495":null,"SJAG_04849":null,"SJAG_05024":null,"SJAG_05204":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"ribonucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribonucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009199","terms_by_termid":{"GO:0006110":null,"GO:0006183":null,"GO:0006228":null,"GO:0006241":null,"GO:0042776":null,"GO:0044210":null,"GO:0044211":null,"GO:0045820":null,"GO:0046034":null,"GO:0046036":null,"GO:0061613":null,"GO:0061621":null,"GO:1905707":null}}


id: PBO:0076940
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tissue factor pathway inhibitor","termid":"PBO:0076940"}


id: GO:0071857
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-endorphin receptor.","definition_xrefs":["GOC:mah","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"beta-endorphin receptor binding","termid":"GO:0071857"}


id: MOD:01405
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-proline residue to form L-proline thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:7592021","PubMed:8557573","RESID:AA0482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-proline residue","termid":"MOD:02054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-proline thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(2S)-pyrrolidin-2-yl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Pro-Cys)","type":"exact"},{"name":"L-proline thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01405"}


id: PBO:0062299
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id: GO:0005308
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id: PBO:0082629
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id: GO:1904013
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id: GO:0019639
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id: MONDO:0016625
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id: PBO:0029759
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id: MONDO:0002280
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id: GO:0001675
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id: PBO:0048303
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id: PBO:0087995
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id: GO:0048008
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id: MONDO:1012756
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id: MONDO:0004802
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id: PBO:0055977
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id: GO:0043271
data:
  {"annotated_genes":["SJAG_00296","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91558,113669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"monoatomic ion transport","termid":"GO:0006811"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of monoatomic ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of ion transport","type":"exact"},{"name":"down-regulation of ion transport","type":"exact"},{"name":"downregulation of ion transport","type":"exact"},{"name":"inhibition of ion transport","type":"narrow"},{"name":"negative regulation of ion transport","type":"broad"}],"termid":"GO:0043271","terms_by_termid":{"GO:1905949":null}}


id: GO:0090733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A extracellular matrix complex involved in cell adhesion and cell migration. Typically homotrimeric or homohexameric. In mammals, four complexes exist: Tenascin-C, Tenascin-N (also known as Tenascin-W), Tenascin-X and Tenascin-R.","definition_xrefs":["PMID:11731446","GOC:bhm","PMID:23658023","PMID:17909022","PMID:12845616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-matrix adhesion","termid":"GO:0098637"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tenascin complex","synonyms":[{"name":"Tenascin-C","type":"narrow"},{"name":"Tenascin-N","type":"narrow"},{"name":"Tenascin-R","type":"narrow"},{"name":"Tenascin-W","type":"narrow"},{"name":"Tenascin-X","type":"narrow"}],"termid":"GO:0090733"}


id: PBO:0014299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe sprecific protein","termid":"PBO:0014299"}


id: GO:0060093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the frequency, rate or extent of glycinergic synaptic transmission. Glycinergic synaptic transmission is the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine.","definition_xrefs":["GOC:dms","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"},{"relation_name":"is_a","term_name":"regulation of synaptic transmission, glycinergic","termid":"GO:0060092"},{"relation_name":"negatively_regulates","term_name":"synaptic transmission, glycinergic","termid":"GO:0060012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of synaptic transmission, glycinergic","synonyms":[{"name":"negative regulation of glycinergic synaptic transmission","type":"exact"}],"termid":"GO:0060093"}


id: MONDO:1011140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia, non-human animal","termid":"MONDO:1010289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, domestic cat","secondary_identifiers":["OMIA:001764-9685"],"termid":"MONDO:1011140","xrefs":{"Monarch":{"xref_id":"1011140"}}}


id: GO:1902175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an oxidative stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis","GOC:TermGenie","PMID:11672522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0008631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1902175"}


id: FYPO:0002566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"},{"relation_name":"is_a","term_name":"abolished histone methylation during vegetative growth","termid":"FYPO:0002565"},{"relation_name":"is_a","term_name":"abolished protein lysine methylation during vegetative growth","termid":"FYPO:0004488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"abolished histone H3-K9 methylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 methylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 methylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K9me during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 methylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 methylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K9 methylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002566"}


id: PBO:0083721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-resident protein involved in peroxisomal biogenesis; ER-localized protein that associates with peroxisomes; interacts with Pex30p and reticulons Rtn1p and Yop1p to regulate peroxisome biogenesis from the ER; role in peroxisomal-destined vesicular flow from the ER; regulates peroxisomal size, number and distribution; Pex28p and Pex29p may act at steps upstream of those mediated by Pex30p, Pex31p, and Pex32p; forms ER foci upon DNA replication stress","termid":"PBO:0083721"}


id: PBO:0086887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane polyol transporter; supports growth on and uptake of mannitol and sorbitol with moderate affinity when overexpressed in a strain deleted for hexose family members; minor hexose transport activity when overexpressed in a similar strain; induced by non-fermentable carbon sources; induced in low glucose, repressed in high glucose; HXT13 has a paralog, HXT17, that arose from a segmental duplication","termid":"PBO:0086887"}


id: PBO:0072513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 42","termid":"PBO:0072513"}


id: GO:1904446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of Sertoli cell barrier.","definition_xrefs":["GO_REF:0000058","PMID:18057314","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of establishment of Sertoli cell barrier","termid":"GO:1904444"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"establishment of Sertoli cell barrier","termid":"GO:0097368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of Sertoli cell barrier","synonyms":[{"name":"activation of establishment of BTB","type":"narrow"},{"name":"activation of establishment of SCB","type":"narrow"},{"name":"activation of establishment of Sertoli cell barrier","type":"narrow"},{"name":"activation of establishment of blood-testis barrier","type":"narrow"},{"name":"positive regulation of establishment of BTB","type":"exact"},{"name":"positive regulation of establishment of SCB","type":"exact"},{"name":"positive regulation of establishment of blood-testis barrier","type":"exact"},{"name":"up regulation of establishment of BTB","type":"exact"},{"name":"up regulation of establishment of SCB","type":"exact"},{"name":"up regulation of establishment of Sertoli cell barrier","type":"exact"},{"name":"up regulation of establishment of blood-testis barrier","type":"exact"},{"name":"up-regulation of establishment of BTB","type":"exact"},{"name":"up-regulation of establishment of SCB","type":"exact"},{"name":"up-regulation of establishment of Sertoli cell barrier","type":"exact"},{"name":"up-regulation of establishment of blood-testis barrier","type":"exact"},{"name":"upregulation of establishment of BTB","type":"exact"},{"name":"upregulation of establishment of SCB","type":"exact"},{"name":"upregulation of establishment of Sertoli cell barrier","type":"exact"},{"name":"upregulation of establishment of blood-testis barrier","type":"exact"}],"termid":"GO:1904446"}


id: FYPO:0003017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetative cell is inviable and elongated during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell during cellular response to salt stress (obsolete FYPO:0003017)","synonyms":[{"name":"elongated inviable cell during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell during cellular response to salt stress","type":"exact"},{"name":"inviable elongated vegetative cell during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"lethal; elongated vegetative cell during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003017"}


id: PBO:0052121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCND3 antisense RNA 1","termid":"PBO:0052121"}


id: GO:1901268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cephalosporin C.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cephalosporin biosynthetic process","termid":"GO:0043646"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"cephalosporin C metabolic process","termid":"GO:1901266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"cephalosporin C biosynthetic process","synonyms":[{"name":"cephalosporin C anabolism","type":"exact"},{"name":"cephalosporin C biosynthesis","type":"exact"},{"name":"cephalosporin C formation","type":"exact"},{"name":"cephalosporin C synthesis","type":"exact"}],"termid":"GO:1901268"}


id: GO:0031278
data:
  {"annotated_genes":["SJAG_03871","SJAG_04401","SJAG_02996","SJAG_03790","SJAG_04095","SJAG_01972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99105,99106,99107,99108,99247,118355],"is_not":false,"summary":null,"term":"GO:0031278"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactose residue from a donor molecule, such as GDP-galactose or UDP-galactose, to an oligosaccharide, forming an alpha-1,2-linkage.","definition_xrefs":["PMID:7522655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01972":null,"SJAG_02996":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04095":null,"SJAG_04401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031278","terms_by_termid":{"GO:0031278":null}}


id: GO:0052104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates systemic acquired resistance in the host organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host systemic acquired resistance (obsolete GO:0052104)","synonyms":[{"name":"activation by organism of SAR in host","type":"exact"},{"name":"activation by organism of systemic acquired resistance in host","type":"exact"},{"name":"induction by organism of SAR in host","type":"exact"},{"name":"induction by organism of systemic acquired resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of systemic acquired resistance in host","type":"exact"},{"name":"positive regulation by organism of systemic acquired resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host systemic acquired resistance","type":"related"},{"name":"positive regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"stimulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"up regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"up-regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"upregulation by symbiont of systemic acquired resistance in host","type":"related"}],"termid":"GO:0052104"}


id: PBO:0005188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"switch-activating protein Sap1","termid":"PBO:0005188"}


id: PBO:0031012
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_vegetative_growth","termid":"PBO:0031012"}


id: GO:0047432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,2-dialkylglycine + H+ + pyruvate = L-alanine + CO2 + dialkyl ketone.","definition_xrefs":["RHEA:16073","EC:4.1.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"2,2-dialkylglycine decarboxylase (pyruvate) activity","secondary_identifiers":["MetaCyc:4.1.1.64-RXN","KEGG_REACTION:R03854"],"synonyms":[{"name":"2,2-dialkyl-2-amino acid-pyruvate aminotransferase activity","type":"related"},{"name":"2,2-dialkylglycine carboxy-lyase (amino-transferring)","type":"related"},{"name":"2,2-dialkylglycine carboxy-lyase (amino-transferring; L-alanine-forming)","type":"related"},{"name":"L-alanine-alpha-ketobutyrate aminotransferase activity","type":"related"},{"name":"alpha-dialkyl amino acid transaminase activity","type":"related"},{"name":"dialkyl amino acid (pyruvate) decarboxylase activity","type":"related"},{"name":"dialkylamino-acid decarboxylase (pyruvate)","type":"related"}],"termid":"GO:0047432"}


id: GO:0090424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phytochelatin metabolic process in which a metal and exogenous sulfur are incorporated with phytochelatin to form a complex.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytochelatin metabolic process","termid":"GO:0046937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"phytochelatin-metal-sulfur complex formation","synonyms":[{"name":"HWM phytochelatin complex formation","type":"related"},{"name":"high molecular weight phytochelatin complex formation","type":"related"}],"termid":"GO:0090424"}


id: MONDO:0014558
data:
  {"annotated_genes":["SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85787],"is_not":false,"summary":null,"term":"MONDO:0014558"}]},"cv_name":"mondo","definition":"A rare genetic neurodevelopmental disorder characterized by global developmental delay (DD) and variable degrees of intellectual disability (ID) with delayed or limited/absent speech development associated with neonatal hypotonia, feeding difficulties, cardiac anomalies and dysmorphic facial features, predominantly broad nasal tip and thin, tented upper lip. Microcephaly, frequent infections, gastrointestinal and/or ocular anomalies have also been described.","definition_xrefs":["Orphanet:457193"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02165":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005267","MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant intellectual disability-craniofacial anomalies-cardiac defects syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225396","GARD:17797","OMIM:616268","DOID:0070062","NORD:1954","MEDGEN:903767"],"synonyms":[{"name":"Arboleda-Tham syndrome","type":"exact"},{"name":"KAT6A Syndrome","type":"exact"},{"name":"MRD32","type":"exact"},{"name":"autosomal dominant intellectual disability 32","type":"exact"},{"name":"autosomal dominant intellectual disability-craniofacial anomalies-cardiac defects syndrome","type":"exact"},{"name":"autosomal dominant mental retardation 32","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 32","type":"related"},{"name":"intellectual disability, autosomal dominant 32","type":"related"},{"name":"intellectual disability, autosomal dominant type 32","type":"exact"},{"name":"mental retardation, autosomal dominant 32","type":"related"},{"name":"mental retardation, autosomal dominant type 32","type":"exact"}],"termid":"MONDO:0014558","terms_by_termid":{"MONDO:0014558":null},"xrefs":{"Monarch":{"xref_id":"0014558"}}}


id: GO:0140826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of zinc from one side of a membrane to the other according to the reaction: H+(out) + Zn2+(in) = H+(in) + Zn2+(out).","definition_xrefs":["PMID:19366695","PMID:30893306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"},{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"zinc:proton antiporter activity","termid":"GO:0140826"}


id: PBO:0004362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fimbrin","termid":"PBO:0004362"}


id: GO:0052021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of ethylene in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of ethylene levels in host (obsolete GO:0052021)","synonyms":[{"name":"modulation by organism of ethylene levels in other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052021"}


id: PR:Q9P382
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup82 gene.","definition_xrefs":["UniProtKB:Q9P382","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup82 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13A2.02","synonyms":[{"name":"Spom972h-nup82","type":"exact"},{"name":"nuclear pore protein nup82 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P382"}


id: GO:0032404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mismatch repair complex binding","termid":"GO:0032404"}


id: PBO:0052321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1217","termid":"PBO:0052321"}


id: MONDO:1012214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"persistent right aortic arch, non-human animal","termid":"MONDO:1011644"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent right aortic arch, puma","secondary_identifiers":["OMIA:000794-9696"],"termid":"MONDO:1012214","xrefs":{"Monarch":{"xref_id":"1012214"}}}


id: MONDO:1012094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"granule cell type cerebellar hypoplasia, non-human animal","termid":"MONDO:1011842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granule cell type cerebellar hypoplasia, dog","secondary_identifiers":["OMIA:000427-9615"],"termid":"MONDO:1012094","xrefs":{"Monarch":{"xref_id":"1012094"}}}


id: GO:0150064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Early postnatal vertebrate developmental process, during which axons of retinal ganglion cells (RGCs), transmitting overlapping inputs from both eyes, segregate into distinct eye-specific non-overlapping regions in the dorsal lateral geniculate nucleus (dLGN) of the thalamus.","definition_xrefs":["PMID:16025107","PMID:22632727","GOC:aruk","PMID:29322522","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"},{"relation_name":"part_of","term_name":"visual system development","termid":"GO:0150063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vertebrate eye-specific patterning","synonyms":[{"name":"binocular vision development","type":"related"},{"name":"eye-specific patterning","type":"broad"},{"name":"eye-specific segregation","type":"broad"},{"name":"vertebrate eye-specific segregation","type":"exact"}],"termid":"GO:0150064"}


id: PBO:0068678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 59, pseudogene","termid":"PBO:0068678"}


id: PATO:0001980
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having distinct parts arising from a common point or center.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digitate","termid":"PATO:0001980"}


id: MONDO:0023157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibular hypoplasia scapulo pelvic dysplasia absent","termid":"MONDO:0023157","xrefs":{"Monarch":{"xref_id":"0023157"}}}


id: GO:0061477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aromatase inhibitor stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to aromatase inhibitor","termid":"GO:0061477"}


id: PBO:0068718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 7, pseudogene","termid":"PBO:0068718"}


id: GO:0047111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ferricytochrome C-553 + formate = ferrocytochrome C-553 + CO2.","definition_xrefs":["MetaCyc:1.2.2.3-RXN","EC:1.17.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","termid":"GO:0016622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"formate dehydrogenase (cytochrome-c-553) activity","secondary_identifiers":["RHEA:15189"],"synonyms":[{"name":"formate dehydrogenase (cytochrome c-553)","type":"related"},{"name":"formate:ferricytochrome-c-553 oxidoreductase activity","type":"related"}],"termid":"GO:0047111"}


id: GO:0060762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of branching involved in mammary gland duct morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"branching involved in mammary gland duct morphogenesis","termid":"GO:0060444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in mammary gland duct morphogenesis","termid":"GO:0060762"}


id: PBO:0081880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 827","termid":"PBO:0081880"}


id: GO:0052337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a host organism destabilizes a symbiont membrane. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption by host of symbiont membrane (obsolete GO:0052337)","synonyms":[{"name":"modification by host of symbiont cell membrane","type":"narrow"},{"name":"modification by host of symbiont membrane","type":"related"}],"termid":"GO:0052337"}


id: GO:1902859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propionyl-CoA.","definition_xrefs":["PMID:15514053","GOC:mengo_curators","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"propionyl-CoA metabolic process","termid":"GO:1902858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0006629","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"propionyl-CoA catabolic process","synonyms":[{"name":"propionyl-CoA breakdown","type":"exact"},{"name":"propionyl-CoA catabolism","type":"exact"},{"name":"propionyl-CoA degradation","type":"exact"}],"termid":"GO:1902859"}


id: PBO:0001257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Hsr1","termid":"PBO:0001257"}


id: GO:1903208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen peroxide-induced neuron death.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:24252804","GO_REF:0000058","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of hydrogen peroxide-induced neuron death (obsolete GO:1903208)","synonyms":[{"name":"down regulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"down regulation of neuron death in response to H2O2","type":"exact"},{"name":"down regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"down regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"down-regulation of neuron death in response to H2O2","type":"exact"},{"name":"down-regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"downregulation of neuron death in response to H2O2","type":"exact"},{"name":"downregulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"inhibition of hydrogen peroxide-induced neuron death","type":"narrow"},{"name":"inhibition of neuron death in response to H2O2","type":"narrow"},{"name":"inhibition of neuron death in response to hydrogen peroxide","type":"narrow"},{"name":"inhibition of neuronal cell death in response to hydrogen peroxide","type":"narrow"},{"name":"negative regulation of neuron death in response to H2O2","type":"exact"},{"name":"negative regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"negative regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"neuroprotection against H2O2-induced cell death","type":"related"},{"name":"neuroprotection against hydrogen peroxide","type":"related"},{"name":"protection against H2O2-induced neuron death","type":"related"},{"name":"protection against hydrogen peroxide-induced neuron death","type":"related"}],"termid":"GO:1903208"}


id: FYPO:0005598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is increased during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to centromere","termid":"FYPO:0006239"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to centromere during meiotic cell cycle","synonyms":[{"name":"increased protein localisation to centromere during meiotic cell cycle","type":"exact"},{"name":"increased protein localisation to chromosome, centromeric region during meiotic cell cycle","type":"exact"},{"name":"increased protein localization to chromosome, centric region during meiotic cell cycle","type":"exact"},{"name":"increased protein localization to chromosome, centromeric region during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005598"}


id: PBO:0054785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2198","termid":"PBO:0054785"}


id: GO:0004089
data:
  {"annotated_genes":["SJAG_06611"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77915],"is_not":false,"summary":null,"term":"GO:0004089"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogencarbonate + H+ = CO2 + H2O.","definition_xrefs":["EC:4.2.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"carbonate dehydratase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1475435","Reactome:R-HSA-1475017","Reactome:R-HSA-1475028","Reactome:R-HSA-1475026","RHEA:10748","Reactome:R-HSA-1237045","Reactome:R-HSA-1475022","Reactome:R-HSA-1237059","Reactome:R-HSA-1237047","Reactome:R-HSA-1237081","Reactome:R-HSA-1475025","Reactome:R-HSA-1475032","Reactome:R-HSA-1475436","MetaCyc:RXN0-5224"],"synonyms":[{"name":"anhydrase activity","type":"related"},{"name":"carbonate anhydrase activity","type":"related"},{"name":"carbonate hydro-lyase (carbon-dioxide-forming)","type":"related"},{"name":"carbonate hydro-lyase activity","type":"related"},{"name":"carbonic acid anhydrase activity","type":"related"},{"name":"carbonic anhydrase A","type":"related"},{"name":"carbonic anhydrase activity","type":"exact"},{"name":"carbonic dehydratase activity","type":"related"},{"name":"carboxyanhydrase activity","type":"related"}],"termid":"GO:0004089","terms_by_termid":{"GO:0004089":null}}


id: PBO:0089999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoheme IX farnesyltransferase","termid":"PBO:0089999"}


id: SO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Jockey retrotransposons are LINE elements (SO:0000194) found only in arthropods. The full-length element is ~ 5 kb and contains two open reading frames (SO:0000236), ORF1 (568 aa) and ORF2 (916 aa), the second of which encodes an apurinic endonuclease (APE) and a reverse transcriptase (RT).","definition_xrefs":["PMID:31709017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LINE_element","termid":"SO:0000194"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jockey_LINE_retrotransposon","synonyms":[{"name":"Jockey LINE retrotransposon","type":"exact"},{"name":"LINE Jockey element","type":"exact"},{"name":"RIJ retrotransposon","type":"exact"}],"termid":"SO:0002271"}


id: PBO:0065213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase 1","termid":"PBO:0065213"}


id: GO:0044289
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Sites of close apposition of the inner and outer mitochondrial membrane.","definition_xrefs":["PMID:22009199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"},{"relation_name":"part_of","term_name":"mitochondrial membrane","termid":"GO:0031966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitochondrial inner-outer membrane contact site","secondary_identifiers":["GO:0044285"],"synonyms":[{"name":"bridge contact site","type":"related"},{"name":"contact site","type":"broad"}],"termid":"GO:0044289"}


id: GO:2000356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of kidney smooth muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"},{"relation_name":"regulates","term_name":"kidney smooth muscle cell differentiation","termid":"GO:0072195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of kidney smooth muscle cell differentiation","termid":"GO:2000356"}


id: GO:0098966
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the extracellular matrix that lies within the perisynaptic space.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"},{"relation_name":"part_of","term_name":"synapse-associated extracellular matrix","termid":"GO:0099535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"perisynaptic extracellular matrix","synonyms":[{"name":"extrasynaptic extracellular matrix","type":"exact"},{"name":"perisynaptic ECM","type":"exact"}],"termid":"GO:0098966"}


id: PBO:0087723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAGA transcriptional regulatory complex; involved in proper assembly of the complex; also present as a C-terminally truncated form in the SLIK/SALSA transcriptional regulatory complex","termid":"PBO:0087723"}


id: MOD:00451
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a propanoyl group.","definition_xrefs":["PubMed:11999733","PubMed:12175151","PubMed:11857757","Unimod:58#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propanoylated residue","termid":"MOD:01894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino propanoylated residue","synonyms":[{"name":"Propionate labeling reagent light form (N-term & K)","type":"related"},{"name":"Propionyl","type":"related"}],"termid":"MOD:00451"}


id: PBO:0071429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 35","termid":"PBO:0071429"}


id: GO:0008953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: penicillin + H2O = a carboxylate + 6-aminopenicillanate.","definition_xrefs":["EC:3.5.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"penicillin amidase activity","secondary_identifiers":["MetaCyc:PENICILLIN-AMIDASE-RXN","RHEA:18693"],"synonyms":[{"name":"alpha-acylamino-beta-lactam acylhydrolase activity","type":"related"},{"name":"ampicillin acylase activity","type":"related"},{"name":"benzylpenicillin acylase activity","type":"related"},{"name":"novozym 217","type":"related"},{"name":"palmitoleoyl [acyl-carrier protein]-dependent acyltransferase activity","type":"exact"},{"name":"penicillin acylase activity","type":"related"},{"name":"penicillin amidohydrolase activity","type":"related"},{"name":"semacylase activity","type":"related"}],"termid":"GO:0008953"}


id: GO:0016237
data:
  {"annotated_genes":["SJAG_03718","SJAG_04232","SJAG_03100","SJAG_00355","SJAG_01722","SJAG_02100","SJAG_01135","SJAG_01274","SJAG_04502","SJAG_06309","SJAG_01382","SJAG_01283","SJAG_05017","SJAG_04655","SJAG_03851","SJAG_00004","SJAG_00645"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73832,77316,80456,73476,77417,80037,72977,73694,72506,71859,72653,74770,80005,70639,72919,73467,80093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034727"}]},"cv_name":"biological_process","definition":"A type of autophagy where cytosolic components are ingested by late endosomes, lysosomes or yeast-type lytic vacuoles by direct invagination of the compartment membrane without prior sequestration into an autophagosome. The engulfing membranes fuse, resulting in the lysosomal delivery of the cargo wrapped in a single membrane derived from the invaginated lysosomal membrane.","definition_xrefs":["PMID:14679207","PMID:15798367","PMID:9566964","PMID:16973210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00355":null,"SJAG_00645":null,"SJAG_01135":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01722":null,"SJAG_02100":null,"SJAG_03100":null,"SJAG_03718":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05017":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"microautophagy","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"lysosomal microautophagy","type":"broad"}],"termid":"GO:0016237","terms_by_termid":{"GO:0034727":null}}


id: PBO:0061439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 2 group E member 1","termid":"PBO:0061439"}


id: PR:000049732
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proliferating cell nuclear antigen ubiquitinated form that has K63-linked Ub-Ub in Schizosaccharomyces pombe. Example: UniProtKB:Q03392, Lys-164, PR:000049733.","definition_xrefs":["PMID:27151298","PomBase:MAH","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pcn1/Ubiq(K164)","termid":"PR:000044776"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pcn1/K63diUbiq(K164)","pombase_gene_id":"SPBC16D10.09","synonyms":[{"name":"K63-diubiquitinated PCNA (Schizosaccharomyces pombe)","type":"exact"},{"name":"PCNA diubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"PomBase_original_PRO_term_name: proliferating cell nuclear antigen K63-diubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-PCNA/K63diUbiq+","type":"exact"},{"name":"pcn1/K63diUbiq(K164)","type":"exact"}],"termid":"PR:000049732"}


id: RO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a specifically dependent continuant and a generically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. Multiple specifically dependent continuants can concretize the same generically dependent continuant.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concretizes","termid":"RO:0000059"}


id: GO:0019907
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cyclin-dependent kinase activating kinase complex capable of activating cyclin-dependent kinases by threonine phosphorylation, thus regulating cell cycle progression. consists of a kinase, cyclin and optional assembly factors, in human CDK7, CCNH and MNAT1. CAK activity is itself regulated throughout the cell cycle by T-loop phosphorylation of its kinase component (CDK7 in human). Phosphorylation of serine residues during mitosis inactivates the enzyme. Also capable of CAK phosphorylating the carboxyl-terminal domain (CTD) of RNA polymerase II and other transcription activating proteins, as part of the general transcription factor TFIIH.","definition_xrefs":["GOC:bhm","PMID:8752210"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin-dependent protein kinase activating kinase holoenzyme complex (obsolete GO:0019907)","termid":"GO:0019907"}


id: PBO:0001984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphoryl diester phosphodiesterase Gde1 (predicted)","termid":"PBO:0001984"}


id: PBO:0039678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 5 subunit zeta 1","termid":"PBO:0039678"}


id: MONDO:0027772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of lung adenocarcinoma characterized by the presence of mucin pools containing islands of well differentiated adenocarcinoma cells.","definition_xrefs":["NCIT:C45512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"},{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung colloid adenocarcinoma","secondary_identifiers":["UMLS:C1708776","DOID:0080303","DOID:0080304","MEDGEN:313370"],"synonyms":[{"name":"lung colloid adenocarcinoma","type":"exact"},{"name":"lung mucinous cystadenocarcinoma","type":"exact"},{"name":"lung mucinous cystic tumor of borderline malignancy","type":"exact"},{"name":"lung mucinous cystic tumour of borderline malignancy","type":"exact"},{"name":"mucinous lung adenocarcinoma","type":"related"}],"termid":"MONDO:0027772","xrefs":{"Monarch":{"xref_id":"0027772"}}}


id: FYPO:0001844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ansamitocin P-3. Cells stop growing (and may die) at a concentration of ansamitocin P-3 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to ansamitocin P-3","synonyms":[{"name":"hypersensitive to ansamitocin P-3","type":"exact"},{"name":"sensitive to ansamitocin P-3 during mitotic cell cycle","type":"related"},{"name":"sensitive to ansamitocin P-3 during vegetative growth","type":"exact"}],"termid":"FYPO:0001844"}


id: GO:1990720
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of two microtubules present in the axonemal central pair. It is distinguishable from the C1 axonemal microtubule (also called C1 tubule) by the presence of differing protein components of the projections.","definition_xrefs":["PMID:21586547","GOC:cilia","PMID:9295136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal central pair","termid":"GO:0097540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"C2 axonemal microtubule","synonyms":[{"name":"C2 tubule","type":"broad"}],"termid":"GO:1990720"}


id: MONDO:0022323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"allergic contact dermatitis","termid":"MONDO:0006525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"2-hydroxyethyl methacrylate sensitization","secondary_identifiers":["MESH:C535305","MEDGEN:443922","UMLS:C2930873"],"synonyms":[{"name":"2-HEMA sensitization","type":"related"},{"name":"sensitization to 2-hydroxyethyl methacrylate","type":"related"}],"termid":"MONDO:0022323","xrefs":{"Monarch":{"xref_id":"0022323"}}}


id: PBO:0080583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 6","termid":"PBO:0080583"}


id: PBO:0048722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminase 2","termid":"PBO:0048722"}


id: PBO:0072516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 45","termid":"PBO:0072516"}


id: PBO:0089677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII cargo receptor subunit Sec23a","termid":"PBO:0089677"}


id: PBO:0051791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing H","termid":"PBO:0051791"}


id: MONDO:0054665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated pituitary adenoma","termid":"MONDO:0017824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary adenoma 3, multiple types","secondary_identifiers":["UMLS:C4540135","DOID:0112010","OMIM:617686","MEDGEN:1620824"],"synonyms":[{"name":"PITA3","type":"related"},{"name":"pituitary adenoma 3, multiple types","type":"exact"},{"name":"pituitary adenoma 3, multiple types, somatic","type":"exact"}],"termid":"MONDO:0054665","xrefs":{"Monarch":{"xref_id":"0054665"}}}


id: MONDO:0010753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac valvular dysplasia, X-linked","secondary_identifiers":["DOID:0111765","MESH:C535576","OMIM:314400","MEDGEN:78083","GARD:1096","Orphanet:555877","UMLS:C0262436","Orphanet:1864","SCTID:718128009"],"synonyms":[{"name":"CVD1","type":"exact"},{"name":"XMVD","type":"exact"},{"name":"cardiac valvular dysplasia, X-linked","type":"exact"},{"name":"congenital valvular dysplasia","type":"exact"},{"name":"myxomatous valvular dystrophy, X-linked","type":"exact"},{"name":"valvular heart disease, congenital","type":"exact"}],"termid":"MONDO:0010753","xrefs":{"Monarch":{"xref_id":"0010753"}}}


id: MONDO:0013428
data:
  {"annotated_genes":["SJAG_02394"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87248],"is_not":false,"summary":null,"term":"MONDO:0013428"}]},"cv_name":"mondo","definition":"Any Meier-Gorlin syndrome in which the cause of the disease is a mutation in the ORC4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meier-Gorlin syndrome","termid":"MONDO:0016817"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02394":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Meier-Gorlin syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462447","OMIM:613800","UMLS:C3151097","DOID:0080513","GARD:15708"],"synonyms":[{"name":"MGORS2","type":"related"},{"name":"Meier-GORLIN syndrome 2","type":"related"},{"name":"Meier-Gorlin syndrome 2","type":"exact"},{"name":"Meier-Gorlin syndrome caused by mutation in ORC4","type":"exact"},{"name":"Meier-Gorlin syndrome type 2","type":"exact"},{"name":"ORC4 Meier-Gorlin syndrome","type":"exact"}],"termid":"MONDO:0013428","terms_by_termid":{"MONDO:0013428":null},"xrefs":{"Monarch":{"xref_id":"0013428"}}}


id: GO:0099062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic early endosome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic early endosome membrane (obsolete GO:0099062)","termid":"GO:0099062"}


id: MONDO:0008429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Singleton-Merten dysplasia is characterized by dental dysplasia, progressive calcification of the thoracic aorta with stenosis, osteoporosis and expansion of the marrow cavities in hand bones. Additional features included generalized muscle weakness and atrophy, and chronic psoriasiform skin eruptions. It has been reported in four unrelated patients (male and female) and in a family with multiple affected members (male).","definition_xrefs":["Orphanet:85191"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy of childhood","termid":"MONDO:0957408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Singleton-Merten dysplasia","secondary_identifiers":["NORD:1718","GARD:122","ICD9:733.29","MESH:C537343","OMIMPS:182250","SCTID:254114000","icd11.foundation:1084593684","UMLS:C0432254","MEDGEN:98481"],"synonyms":[{"name":"Merten-Singleton syndrome","type":"exact"},{"name":"SGMRT1","type":"related"},{"name":"SM syndrome","type":"related"},{"name":"Singleton Merten syndrome","type":"exact"},{"name":"Singleton-Merten syndrome","type":"exact"},{"name":"singleton Merten syndrome","type":"exact"},{"name":"syndrome of widened medullary cavities of the metacarpals and phalanges, aortic calcification and abnormal dentition","type":"related"},{"name":"widened medullary cavities of bone, aortic calcification, abnormal dentition, and muscular weakness","type":"related"}],"termid":"MONDO:0008429","xrefs":{"Monarch":{"xref_id":"0008429"}}}


id: PBO:0047047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 110 member B","termid":"PBO:0047047"}


id: SO:0001426
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read produced by the polymerase based sequence by synthesis method.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymerase_synthesis_read","synonyms":[{"name":"polymerase synthesis read","type":"related"}],"termid":"SO:0001426"}


id: GO:0120097
data:
  {"annotated_genes":["SJAG_00295","SJAG_06425"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89893,91564],"is_not":false,"summary":null,"term":"GO:0120097"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in the transfer of the second mannose to the glycosylphosphatidylinositol (GPI) during GPI precursor assembly. In yeast S. cerevisiae this complex consists of GPI18p and PGA1p.","definition_xrefs":["GOC:bhm","PMID:17615295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00295":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"glycosylphosphatidylinositol-mannosyltransferase II complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPI-MT-I complex","type":"related"}],"termid":"GO:0120097","terms_by_termid":{"GO:0120097":null}}


id: SO:0000217
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding glutamyl tRNA (SO:0000260).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine_tRNA_primary_transcript","synonyms":[{"name":"glutamine tRNA primary transcript","type":"exact"}],"termid":"SO:0000217"}


id: GO:0050998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"nitric-oxide synthase binding","synonyms":[{"name":"NOS binding","type":"exact"}],"termid":"GO:0050998"}


id: PBO:0057938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3663 host gene","termid":"PBO:0057938"}


id: PBO:0061407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPSR1 antisense RNA 1","termid":"PBO:0061407"}


id: PBO:0084767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial NADH kinase; phosphorylates NADH; also phosphorylates NAD(+) with lower specificity; required for the response to oxidative stress","termid":"PBO:0084767"}


id: PBO:0064206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLAG1 like zinc finger 2","termid":"PBO:0064206"}


id: GO:0052761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [beta-(1->4)-D-glucosamine]n-[N-acetyl-D-glucosamine]m = D-glucosamine + [beta-(1->4)-D-glucosamine](n-1)-[N-acetyl-D-glucosamine]m. This reaction is the hydrolysis of chitosan or chitosan oligosaccharides to remove a D-glucosamine residue from the non-reducing termini; chitosan is a linear polysaccharide composed of randomly distributed beta-(1->4)-linked D-glucosamine and N-acetyl-D-glucosamine units.","definition_xrefs":["GOC:mengo_curators","MetaCyc:3.2.1.165-RXN","EC:3.2.1.165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"exo-1,4-beta-D-glucosaminidase activity","secondary_identifiers":["KEGG_REACTION:R08715"],"synonyms":[{"name":"chitosan exo-1,4-beta-D-glucosaminidase activity","type":"exact"},{"name":"chitosan glucosaminohydrolase activity","type":"exact"},{"name":"exo-beta-D-glucosaminidase activity","type":"related"},{"name":"exochitosanase activity","type":"related"}],"termid":"GO:0052761"}


id: PBO:0062590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily H member 5","termid":"PBO:0062590"}


id: GO:0016271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A permanent cessation of all vital functions of a tissue.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete tissue death (obsolete GO:0016271)","termid":"GO:0016271"}


id: GO:0070507
data:
  {"annotated_genes":["SJAG_04312","SJAG_00244","SJAG_03637","SJAG_04461","SJAG_00845","SJAG_00333","SJAG_01821","SJAG_00661","SJAG_02332","SJAG_02045","SJAG_04464","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91482,100503,104019,105681,113355,115623],"is_not":false,"summary":null,"term":"GO:0070507"},{"annotations":[102166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[111744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[70973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031110"},{"annotations":[71909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[115354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[90214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule-based process","termid":"GO:0032886"},{"relation_name":"is_a","term_name":"regulation of cytoskeleton organization","termid":"GO:0051493"},{"relation_name":"regulates","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01821":null,"SJAG_02045":null,"SJAG_02332":null,"SJAG_03637":null,"SJAG_04312":null,"SJAG_04461":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of microtubule cytoskeleton organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of microtubule cytoskeleton organisation","type":"exact"},{"name":"regulation of microtubule dynamics","type":"exact"}],"termid":"GO:0070507","terms_by_termid":{"GO:0031110":null,"GO:0031117":null,"GO:0060236":null,"GO:0070507":null,"GO:0110161":null,"GO:0110162":null,"GO:1901673":null}}


id: PBO:0049842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 5A","termid":"PBO:0049842"}


id: FYPO:0006366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A meiosis phenotype in which meiotic telomere clustering does not occur. Meiotic telomere clustering is the dynamic reorganization of telomeres in early meiotic prophase, during which meiotic chromosome ends are gathered in a bouquet arrangement at the inner surface of the nuclear envelope proximal to the spindle pole body.","definition_xrefs":["PMID:24954111","GO:0045141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic telomere clustering","termid":"FYPO:0000172"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"abolished meiotic telomere clustering","synonyms":[{"name":"abolished bouquet formation","type":"exact"},{"name":"meiotic telomere clustering abolished","type":"exact"}],"termid":"FYPO:0006366"}


id: PBO:0091651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine deaminase","termid":"PBO:0091651"}


id: PBO:0002910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc13","termid":"PBO:0002910"}


id: GO:0030881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to beta-2-microglobulin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"beta-2-microglobulin binding","termid":"GO:0030881"}


id: FYPO:0006106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at the central core of the centromeric regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished chromatin binding","termid":"FYPO:0001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished chromatin binding at centromere central core","synonyms":[{"name":"chromatin binding at centromere central core abolished","type":"exact"}],"termid":"FYPO:0006106"}


id: PBO:0116324
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Extracellular Five-prime Nucleotidase","termid":"PBO:0116324"}


id: GO:1903845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to transforming growth factor beta stimulus.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF_miRNA","GOC:BHF","PMID:22269326","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"is_a","term_name":"regulation of cellular response to transforming growth factor beta stimulus","termid":"GO:1903844"},{"relation_name":"negatively_regulates","term_name":"cellular response to transforming growth factor beta stimulus","termid":"GO:0071560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to transforming growth factor beta stimulus","synonyms":[{"name":"down regulation of cellular response to TGF-beta stimulus","type":"exact"},{"name":"down regulation of cellular response to TGFbeta stimulus","type":"exact"},{"name":"down regulation of cellular response to transforming growth factor beta stimulus","type":"exact"},{"name":"down-regulation of cellular response to TGF-beta stimulus","type":"exact"},{"name":"down-regulation of cellular response to TGFbeta stimulus","type":"exact"},{"name":"down-regulation of cellular response to transforming growth factor beta stimulus","type":"exact"},{"name":"downregulation of cellular response to TGF-beta stimulus","type":"exact"},{"name":"downregulation of cellular response to TGFbeta stimulus","type":"exact"},{"name":"downregulation of cellular response to transforming growth factor beta stimulus","type":"exact"},{"name":"inhibition of cellular response to TGF-beta stimulus","type":"narrow"},{"name":"inhibition of cellular response to TGFbeta stimulus","type":"narrow"},{"name":"inhibition of cellular response to transforming growth factor beta stimulus","type":"narrow"},{"name":"negative regulation of cellular response to TGF-beta stimulus","type":"exact"},{"name":"negative regulation of cellular response to TGFbeta stimulus","type":"exact"}],"termid":"GO:1903845"}


id: PR:O13853
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- its3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-phosphate 5-kinase its3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.14","synonyms":[{"name":"1-phosphatidylinositol 4-phosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PIP5K (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns(4)P-5-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-its3","type":"exact"},{"name":"diphosphoinositide kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13853"}


id: PBO:0029423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029423"}


id: PBO:0028725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_actin_filament-based_movement","termid":"PBO:0028725"}


id: GO:0060775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) contributing to the interdigitation of cells along the mediolateral axis during gastrulation.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in gastrula mediolateral intercalation (obsolete GO:0060775)","termid":"GO:0060775"}


id: PBO:0086800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBR285W is not an essential gene","termid":"PBO:0086800"}


id: MONDO:0011243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Grange syndrome is characterized by stenosis or occlusion of multiple arteries (including the renal, cerebral and abdominal vessels), hypertension, brachysyndactyly, syndactyly, increased bone fragility, and learning difficulties or borderline intellectual deficit. Congenital heart defects were also reported in some cases.","definition_xrefs":["Orphanet:79094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grange syndrome","secondary_identifiers":["MESH:C566529","OMIM:602531","icd11.foundation:729368905","SCTID:717824007","UMLS:C1865267","GARD:16697","MEDGEN:355427"],"synonyms":[{"name":"GRNG","type":"related"},{"name":"arterial occlusive disease, progressive, with hypertension, heart defects, bone fragility, and brachysyndactyly","type":"related"},{"name":"grange occlusive arterial syndrome","type":"exact"},{"name":"grange syndrome","type":"exact"},{"name":"progressive arterial occlusive disease-hypertension-heart defects-bone fragility-brachysyndactyly syndrome","type":"exact"}],"termid":"MONDO:0011243","xrefs":{"Monarch":{"xref_id":"0011243"}}}


id: MONDO:0041825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial meningitis","termid":"MONDO:0006670"},{"relation_name":"is_a","term_name":"gram-negative bacterial infections","termid":"MONDO:0021678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial meningitis caused by gram-negative bacteria","secondary_identifiers":["MEDGEN:678524","SCTID:425887005","UMLS:C0854215"],"synonyms":[{"name":"bacterial meningitis caused by gram-negative bacteria","type":"exact"},{"name":"bacterial meningitis due to gram-negative bacteria","type":"exact"},{"name":"gram-negative bacterial meningitis","type":"related"},{"name":"meningitis with gram negative bacteria","type":"related"},{"name":"meningitis with gramme negative bacteria","type":"related"}],"termid":"MONDO:0041825","xrefs":{"Monarch":{"xref_id":"0041825"}}}


id: PBO:0064992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolylcarboxypeptidase","termid":"PBO:0064992"}


id: PBO:0036475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex ChAPs family (Chs5p-Arf1p-binding) protein Bch1","termid":"PBO:0036475"}


id: PR:Q09837
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI mannosyltransferase 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.12c","secondary_identifiers":["UniProtKB:Q09837"],"synonyms":[{"name":"GPI mannosyltransferase IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGZ","type":"exact"}],"termid":"PR:Q09837"}


id: MONDO:0003082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis","termid":"MONDO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"filamentary keratitis","secondary_identifiers":["DOID:4664","ICD9:370.23","icd11.foundation:942510664","MEDGEN:509773","UMLS:C0155077","SCTID:51286002"],"termid":"MONDO:0003082","xrefs":{"Monarch":{"xref_id":"0003082"}}}


id: PBO:0076532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 46","termid":"PBO:0076532"}


id: GO:1990794
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a cell situated by the cell sides which interface adjacent cells and near the base. Often used in reference to animal polarized epithelial cells.","definition_xrefs":["PMID:18495799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"basal part of cell","termid":"GO:0045178"},{"relation_name":"part_of","term_name":"lateral part of cell","termid":"GO:0097574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basolateral part of cell","termid":"GO:1990794"}


id: PBO:0002977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helper of TIM (predicted)","termid":"PBO:0002977"}


id: PBO:0031263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_recombination_at_mitotic_DNA_replication_fork_barriers","termid":"PBO:0031263"}


id: PBO:0117437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein, implicated in transmembrane trasnsport or organelle fission","termid":"PBO:0117437"}


id: GO:2000489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatic stellate cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"regulates","term_name":"hepatic stellate cell activation","termid":"GO:0035733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatic stellate cell activation","termid":"GO:2000489"}


id: GO:0000243
data:
  {"annotated_genes":["SJAG_01654","SJAG_05009","SJAG_00225","SJAG_03995","SJAG_03983","SJAG_00147","SJAG_00058","SJAG_01301","SJAG_00249"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72725,77448,79677,79908,91901,98155,101560,113579,119014],"is_not":false,"summary":null,"term":"GO:0000243"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by association of the U1 snRNP with the 5' splice site of an unspliced intron in an RNA transcript.","definition_xrefs":["GOC:krc","PMID:9150140","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_01301":null,"SJAG_01654":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"commitment complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mammalian spliceosomal E complex","type":"narrow"},{"name":"mammalian spliceosomal complex E","type":"narrow"},{"name":"yeast spliceosomal complex CC","type":"narrow"}],"termid":"GO:0000243","terms_by_termid":{"GO:0000243":null}}


id: PBO:0029497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_normal_unseptated_germ_tube_morphology_(obsolete_FYPO:0002218)","termid":"PBO:0029497"}


id: MONDO:1011205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Van den Ende-Gupta syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Van den Ende-Gupta syndrome, non-human animal","termid":"MONDO:1010314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Van den Ende-Gupta syndrome, dog","secondary_identifiers":["OMIA:002016-9615"],"termid":"MONDO:1011205","xrefs":{"Monarch":{"xref_id":"1011205"}}}


id: PBO:0043314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 4 pseudogene 3","termid":"PBO:0043314"}


id: PBO:0089792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit 7a","termid":"PBO:0089792"}


id: PBO:0050017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DM beta","termid":"PBO:0050017"}


id: MONDO:1010513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Triploidy that occurs in tench.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triploidy, non-human animal","termid":"MONDO:1010031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triploidy, tench","secondary_identifiers":["OMIA:001180-27717"],"termid":"MONDO:1010513","xrefs":{"Monarch":{"xref_id":"1010513"}}}


id: MONDO:1011022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly and cerebellar hypoplasia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly and cerebellar hypoplasia, non-human animal","termid":"MONDO:1010247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lissencephaly and cerebellar hypoplasia, dog","secondary_identifiers":["OMIA:001867-9615"],"termid":"MONDO:1011022","xrefs":{"Monarch":{"xref_id":"1011022"}}}


id: PBO:0049609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 12","termid":"PBO:0049609"}


id: FYPO:0002358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0005865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"normal histone H3-K9 dimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me2 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"normal silent mating-type cassette histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002358"}


id: PATO:0000940
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"obsolete irregular shape (obsolete PATO:0000940)","termid":"PATO:0000940"}


id: PBO:0017782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid8 (predicted)","termid":"PBO:0017782"}


id: GO:0031233
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a plasma membrane consisting of gene products and protein complexes that penetrate the external side of the plasma membrane only, either directly or via some covalently attached hydrophobic anchor.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of external side of plasma membrane (obsolete GO:0031233)","synonyms":[{"name":"intrinsic to external leaflet of plasma membrane","type":"exact"},{"name":"intrinsic to external side of plasma membrane","type":"narrow"}],"termid":"GO:0031233"}


id: MONDO:0859241
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87310],"is_not":false,"summary":null,"term":"MONDO:0859241"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration, childhood-onset, with progressive microcephaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619847","MEDGEN:1801540","UMLS:C5676972"],"termid":"MONDO:0859241","terms_by_termid":{"MONDO:0859241":null},"xrefs":{"Monarch":{"xref_id":"0859241"}}}


id: GO:0052803
data:
  {"annotated_genes":["SJAG_02400","SJAG_03775","SJAG_01346","SJAG_01137","SJAG_00248","SJAG_04747","SJAG_00592","SJAG_03055"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71492,76947,64479,60012,76189,78788,80651,57876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving imidazoles, five-membered organic heterocycle containing two nitrogen atoms at positions 1 and 3, or any of its derivatives; compounds containing an imidazole skeleton.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00248":null,"SJAG_00592":null,"SJAG_01137":null,"SJAG_01346":null,"SJAG_02400":null,"SJAG_03055":null,"SJAG_03775":null,"SJAG_04747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imidazole-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"imidazole metabolism","type":"exact"}],"termid":"GO:0052803","terms_by_termid":{"GO:0000105":null}}


id: MONDO:0016807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pure mitochondrial myopathy is a rare mitochondrial disease characterized by exclusive skeletal muscle involvement, without clinical evidence of other organ involvement, manifesting with progressive limb weakness, proximal limb muscle atrophy, and eye muscle anomalies (e.g. ocular motility restriction, ptosis). Patients may present with lactic acidosis, diffuse myalgia and overall fatigability (particularly during/after physical activities), dysphagia, and diminished deep tendon reflexes.","definition_xrefs":["Orphanet:254854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial disease","termid":"MONDO:0044970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pure mitochondrial myopathy","secondary_identifiers":["UMLS:C4517289","MEDGEN:1375079","icd11.foundation:141365898","GARD:20768","SCTID:732245008"],"termid":"MONDO:0016807","xrefs":{"Monarch":{"xref_id":"0016807"}}}


id: PBO:0029944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_mixed_population_including_curved_cells_(obsolete_FYPO:0002293)","termid":"PBO:0029944"}


id: GO:1900670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of F-9775A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polyketide biosynthetic process","termid":"GO:1900732"},{"relation_name":"regulates","term_name":"F-9775A biosynthetic process","termid":"GO:1900611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of F-9775A biosynthetic process","synonyms":[{"name":"regulation of F-9775A anabolism","type":"exact"},{"name":"regulation of F-9775A biosynthesis","type":"exact"},{"name":"regulation of F-9775A formation","type":"exact"},{"name":"regulation of F-9775A synthesis","type":"exact"}],"termid":"GO:1900670"}


id: GO:0086079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from a Purkinje myocyte to a ventricular cardiac muscle cell. The gap junction passes electrical signals between the cells contributing to cardiac conduction.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gap junction channel activity involved in cardiac conduction electrical coupling","termid":"GO:0086075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"gap junction channel activity involved in Purkinje myocyte-ventricular cardiac muscle cell electrical coupling","termid":"GO:0086079"}


id: PBO:0004768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Vti1 (predicted)","termid":"PBO:0004768"}


id: GO:0046414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of organomercury compounds, any organic compound containing a mercury atom.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete organomercury biosynthetic process (obsolete GO:0046414)","synonyms":[{"name":"organomercury anabolism","type":"exact"},{"name":"organomercury biosynthesis","type":"exact"},{"name":"organomercury formation","type":"exact"},{"name":"organomercury synthesis","type":"exact"}],"termid":"GO:0046414"}


id: PBO:0117012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNB2 antisense RNA 1","termid":"PBO:0117012"}


id: PBO:0075538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E18","termid":"PBO:0075538"}


id: PBO:0043141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 9","termid":"PBO:0043141"}


id: MONDO:0000660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of motion perception.","definition_xrefs":["DOID:0060130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"},{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"},{"relation_name":"is_a","term_name":"neuromuscular disease","termid":"MONDO:0019056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"akinetopsia","termid":"MONDO:0000660","xrefs":{"Monarch":{"xref_id":"0000660"}}}


id: FYPO:0003756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell has more than one mitotic spindle, and mitotic sister chromatid separation does not occur.","definition_xrefs":["PomBase:mah","PMID:8978688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"is_a","term_name":"multiple mitotic spindles","termid":"FYPO:0003754"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000631","FYPO:0000641","FYPO:0002399","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0000120"],"is_obsolete":false,"name":"multiple mitotic spindles with abolished sister chromatid separation","synonyms":[{"name":"multiple mitotic spindles with abolished chromosome separation","type":"exact"},{"name":"multiple mitotic spindles with abolished sister chromatid segregation","type":"related"},{"name":"multiple mitotic spindles with abolished sister chromatid separation during mitotic cell cycle","type":"related"},{"name":"multiple mitotic spindles with abolished sister chromatid separation during vegetative growth","type":"exact"}],"termid":"FYPO:0003756"}


id: PBO:0069465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 730, pseudogene","termid":"PBO:0069465"}


id: MONDO:0005013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive morphologic variant of chondrosarcoma. It is composed of a low grade chondrosarcoma and a high grade non-cartilagenous sarcomatous component. Due to the aggressive nature of the disease, its prognosis is poor.","definition_xrefs":["NCIT:C6476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone chondrosarcoma","termid":"MONDO:0000515"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"dedifferentiated chondrosarcoma","secondary_identifiers":["ONCOTREE:DDCHS","DOID:0081247","EFO:0000394","MEDGEN:209021","ICDO:9243/3","UMLS:C0862878"],"synonyms":[{"name":"DDCHS","type":"related"},{"name":"Dedifferentiated chondrosarcoma","type":"exact"}],"termid":"MONDO:0005013","xrefs":{"Monarch":{"xref_id":"0005013"}}}


id: GO:1902261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF","PMID:11299204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"},{"relation_name":"is_a","term_name":"positive regulation of voltage-gated potassium channel activity","termid":"GO:1903818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of delayed rectifier potassium channel activity","synonyms":[{"name":"activation of delayed rectifier potassium channel activity","type":"narrow"},{"name":"up regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"upregulation of delayed rectifier potassium channel activity","type":"exact"}],"termid":"GO:1902261"}


id: GO:1902312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of copper ion transmembrane transport.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:21489137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of copper ion transmembrane transport","termid":"GO:1902311"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"negatively_regulates","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of copper ion transmembrane transport","synonyms":[{"name":"down regulation of copper cation transmembrane transport","type":"exact"},{"name":"down regulation of copper ion membrane transport","type":"exact"},{"name":"down regulation of copper ion transmembrane transport","type":"exact"},{"name":"down-regulation of copper cation transmembrane transport","type":"exact"},{"name":"down-regulation of copper ion membrane transport","type":"exact"},{"name":"down-regulation of copper ion transmembrane transport","type":"exact"},{"name":"downregulation of copper cation transmembrane transport","type":"exact"},{"name":"downregulation of copper ion membrane transport","type":"exact"},{"name":"downregulation of copper ion transmembrane transport","type":"exact"},{"name":"inhibition of copper cation transmembrane transport","type":"narrow"},{"name":"inhibition of copper ion membrane transport","type":"narrow"},{"name":"inhibition of copper ion transmembrane transport","type":"narrow"},{"name":"negative regulation of copper cation transmembrane transport","type":"exact"},{"name":"negative regulation of copper ion membrane transport","type":"exact"}],"termid":"GO:1902312"}


id: PBO:0001471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L9","termid":"PBO:0001471"}


id: MONDO:0001734
data:
  {"annotated_genes":["SJAG_00991","SJAG_05346","SJAG_00289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008612"},{"annotations":[86815,86816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013199"}]},"cv_name":"mondo","definition":"Hereditary disease characterized by seizures, intellectual disability, developmental delay, and skin and ocular lesions. First signs usually occur during infancy or childhood but in rare cases may not occur until 2nd or 3rd decade.","definition_xrefs":["NCIT:C3424"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited nervous system cancer-predisposing syndrome (obsolete MONDO:0016756)","termid":"MONDO:0016756"},{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited renal cancer-predisposing syndrome (obsolete MONDO:0017891)","termid":"MONDO:0017891"},{"relation_name":"excluded_subClassOf","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"tuberous sclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1802","Orphanet:805","MedDRA:10045138","OMIMPS:191100","NANDO:1200607","MESH:D014402","DOID:13515","GARD:7830","NANDO:2200826","ICD9:759.5","MEDGEN:22518","SCTID:7199000","icd11.foundation:1903085809","UMLS:C0041341"],"synonyms":[{"name":"Bourneville disease","type":"exact"},{"name":"Bourneville syndrome","type":"exact"},{"name":"Bourneville's disease","type":"exact"},{"name":"Bourneville's syndrome","type":"exact"},{"name":"TSC","type":"exact"},{"name":"adenoma sebaceum","type":"related"},{"name":"adenoma sebaceum syndrome","type":"related"},{"name":"cerebral sclerosis","type":"exact"},{"name":"epiloia","type":"exact"},{"name":"tuberose sclerosis","type":"exact"},{"name":"tuberous sclerosis","type":"exact"},{"name":"tuberous sclerosis complex","type":"exact"},{"name":"tuberous sclerosis syndrome","type":"exact"}],"termid":"MONDO:0001734","terms_by_termid":{"MONDO:0008612":null,"MONDO:0013199":null},"xrefs":{"Monarch":{"xref_id":"0001734"}}}


id: PBO:0064662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4E","termid":"PBO:0064662"}


id: MONDO:0022889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniostenosis with congenital heart disease intellectual disability","termid":"MONDO:0022889","xrefs":{"Monarch":{"xref_id":"0022889"}}}


id: PBO:0071748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 4","termid":"PBO:0071748"}


id: GO:0018133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl serine-peptidyl cysteine cross-link by the condensation of a serine hydroxyl with the carbonyl of the preceding residue.","definition_xrefs":["RESID:AA0239"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-cysteine oxazolinecarboxylic acid (obsolete GO:0018133)","termid":"GO:0018133"}


id: GO:0002609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of myeloid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of dendritic cell antigen processing and presentation","termid":"GO:0002606"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell antigen processing and presentation","termid":"GO:0002607"},{"relation_name":"positively_regulates","term_name":"myeloid dendritic cell antigen processing and presentation","termid":"GO:0002469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid dendritic cell antigen processing and presentation","synonyms":[{"name":"activation of myeloid dendritic cell antigen processing and presentation","type":"narrow"},{"name":"stimulation of myeloid dendritic cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of myeloid dendritic cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of myeloid dendritic cell antigen processing and presentation","type":"exact"},{"name":"upregulation of myeloid dendritic cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002609"}


id: MONDO:0958174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nevoid basal cell carcinoma syndrome","termid":"MONDO:0007187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"basal cell nevus syndrome 1","secondary_identifiers":["OMIM:109400"],"termid":"MONDO:0958174","xrefs":{"Monarch":{"xref_id":"0958174"}}}


id: GO:0102140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + [heparan sulfate]-N-acetyl-alpha-D-glucosamine = acetate + H+ + [heparan sulfate]-alpha-D-glucosamine.","definition_xrefs":["RHEA:70587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0019213","GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"heparan sulfate N-deacetylase activity","termid":"GO:0102140"}


id: PBO:0042931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cingulin like 1","termid":"PBO:0042931"}


id: PBO:0076470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport and golgi organization 6 homolog","termid":"PBO:0076470"}


id: PR:Q9P7F9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctr5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7F9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transport protein ctr5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.05","synonyms":[{"name":"Spom972h-ctr5","type":"exact"},{"name":"copper transporter 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7F9"}


id: MONDO:0007215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly type A1 (BDA1) is a congenital malformation characterized by apparent shortness (or absence) of the middle phalanges of all digits, and occasional fusion with the terminal phalanges.","definition_xrefs":["Orphanet:93388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A1","secondary_identifiers":["MEDGEN:354673","UMLS:C1862151","SCTID:715720006","OMIM:112500","DOID:0110964","GARD:978","MESH:C537088","icd11.foundation:568452529"],"synonyms":[{"name":"BDA1","type":"exact"},{"name":"Farabee type brachydactyly","type":"exact"},{"name":"Farabee-type brachydactyly","type":"related"},{"name":"brachydactyly Farabee type","type":"related"},{"name":"brachydactyly, Farabee type","type":"exact"},{"name":"brachydactyly, type A1","type":"related"}],"termid":"MONDO:0007215","xrefs":{"Monarch":{"xref_id":"0007215"}}}


id: GO:0090035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of chaperone-mediated protein complex assembly. Chaperone-mediated protein complex assembly is the aggregation, arrangement and bonding together of a set of components to form a protein complex, mediated by chaperone molecules that do not form part of the finished complex.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of chaperone-mediated protein complex assembly","termid":"GO:0090034"},{"relation_name":"positively_regulates","term_name":"chaperone-mediated protein complex assembly","termid":"GO:0051131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of chaperone-mediated protein complex assembly","termid":"GO:0090035"}


id: PBO:0045249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C28","termid":"PBO:0045249"}


id: GO:0046535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for a umami taste stimulus to be received and converted to a molecular signal. Umami taste is the savory taste of meats and other foods that are rich in glutamates.","definition_xrefs":["GOC:ai","PMID:11894099","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception of taste","termid":"GO:0050912"},{"relation_name":"part_of","term_name":"sensory perception of umami taste","termid":"GO:0050917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of umami taste","synonyms":[{"name":"perception of umami taste, detection of chemical stimulus","type":"exact"},{"name":"perception of umami taste, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of umami taste","type":"exact"},{"name":"sensory detection of umami taste","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of umami taste","type":"exact"},{"name":"sensory transduction of umami taste","type":"exact"},{"name":"umami taste detection","type":"exact"}],"termid":"GO:0046535"}


id: GO:1901732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving quercetin.","definition_xrefs":["UniPathway:UPA00724","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin metabolic process","synonyms":[{"name":"quercetin metabolism","type":"exact"}],"termid":"GO:1901732"}


id: PATO:0001696
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fecundity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fecundity","termid":"PATO:0000273"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased fecundity","synonyms":[{"name":"low fecundity","type":"exact"}],"termid":"PATO:0001696"}


id: GO:0046881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of follicle-stimulating hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gonadotropin secretion","termid":"GO:0032278"},{"relation_name":"is_a","term_name":"regulation of follicle-stimulating hormone secretion","termid":"GO:0046880"},{"relation_name":"positively_regulates","term_name":"follicle-stimulating hormone secretion","termid":"GO:0046884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of follicle-stimulating hormone secretion","synonyms":[{"name":"activation of follicle-stimulating hormone secretion","type":"narrow"},{"name":"positive regulation of follicle stimulating hormone secretion","type":"exact"},{"name":"stimulation of follicle-stimulating hormone secretion","type":"narrow"},{"name":"up regulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"up-regulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"upregulation of follicle-stimulating hormone secretion","type":"exact"}],"termid":"GO:0046881"}


id: MONDO:0012686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major affective disorder 6","secondary_identifiers":["UMLS:C1970945","MESH:C567075","OMIM:611536","MEDGEN:372673"],"synonyms":[{"name":"MAFD6","type":"exact"},{"name":"MAJOR affective disorder 6","type":"related"},{"name":"bipolar affective disorder","type":"related"},{"name":"major affective disorder 6","type":"exact"}],"termid":"MONDO:0012686","xrefs":{"Monarch":{"xref_id":"0012686"}}}


id: PR:Q09808
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- smn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival motor neuron-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.08c","synonyms":[{"name":"Spom972h-smn1","type":"exact"}],"termid":"PR:Q09808"}


id: PBO:0029846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_rDNA","termid":"PBO:0029846"}


id: PBO:0034076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_non_functional_homology_relationship_with","termid":"PBO:0034076"}


id: GO:0080150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + S-adenosyl-L-methionine = methylbenzoate + S-adenosyl-L-homocysteine.","definition_xrefs":["MetaCyc:RXN-6722","PMID:10852939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity","secondary_identifiers":["RHEA:36099"],"synonyms":[{"name":"S-adenosyl-L-methionine:benzoate carboxyl methyltransferase activity","type":"exact"}],"termid":"GO:0080150"}


id: PBO:0038610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 6","termid":"PBO:0038610"}


id: PR:O13610
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA-processing protein FCF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12416:SF0","OMA:SCHPO02873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein fcf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.04c","secondary_identifiers":["UniProtKB:O13610"],"synonyms":[{"name":"Spom972h-FCF1","type":"exact"}],"termid":"PR:O13610"}


id: PBO:0031658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pseudohyphal_growth_during_cellular_hyperosmotic_response","termid":"PBO:0031658"}


id: GO:0008707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol hexakisphosphate + H2O = 1-myo-inositol 1,2,3,4,5-pentakisphosphate + phosphate.","definition_xrefs":["EC:3.1.3.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"4-phytase activity","secondary_identifiers":["MetaCyc:RXN-7241","RHEA:20960"],"synonyms":[{"name":"6-phytase (name based on 1L-numbering system and not 1D-numbering)","type":"broad"},{"name":"6-phytase activity","type":"exact"},{"name":"myo-inositol-hexakisphosphate 6-phosphohydrolase activity","type":"related"},{"name":"phytase activity","type":"broad"},{"name":"phytate 6-phosphatase activity","type":"related"}],"termid":"GO:0008707"}


id: PBO:0035949
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_ferrichrome_level","termid":"PBO:0035949"}


id: PR:O94469
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A high affinity choline transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03142","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urea active transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.13c","secondary_identifiers":["UniProtKB:O94469"],"synonyms":[{"name":"Spom972h-SLC5A7","type":"exact"}],"termid":"PR:O94469"}


id: GO:1902813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry.","definition_xrefs":["GOC:mr","PMID:10499580","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1902813)","synonyms":[{"name":"down regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"down regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"down regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"down-regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"down-regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"down-regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"downregulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"downregulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"downregulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"inhibition of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"inhibition of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"narrow"},{"name":"inhibition of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"negative regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"negative regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1902813"}


id: PBO:0111927
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific polypeptide Mi","termid":"PBO:0111927"}


id: PBO:0004164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L39 (predicted)","termid":"PBO:0004164"}


id: PBO:0001874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase RNA","termid":"PBO:0001874"}


id: PBO:0040147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asialoglycoprotein receptor 2","termid":"PBO:0040147"}


id: GO:1905641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetaldehyde stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:27687866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to aldehyde","termid":"GO:0110096"},{"relation_name":"is_a","term_name":"response to acetaldehyde","termid":"GO:1905640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acetaldehyde","termid":"GO:1905641"}


id: PBO:0031770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_fermentation","termid":"PBO:0031770"}


id: MONDO:1011536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperkalemic periodic paralysis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperkalemic periodic paralysis, non-human animal","termid":"MONDO:1011433"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperkalemic periodic paralysis, horse","secondary_identifiers":["OMIA:000785-9796"],"synonyms":[{"name":"HYPP, horse","type":"exact"}],"termid":"MONDO:1011536","xrefs":{"Monarch":{"xref_id":"1011536"}}}


id: PBO:0058085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4302","termid":"PBO:0058085"}


id: SO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when the five prime region overlaps with another gene's five prime region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_five_prime_overlap","synonyms":[{"name":"five prime-five prime overlap","type":"exact"}],"termid":"SO:0000074"}


id: GO:0060765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the androgen receptor signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033143"},{"relation_name":"regulates","term_name":"androgen receptor signaling pathway","termid":"GO:0030521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of androgen receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-5625886"],"synonyms":[{"name":"regulation of androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060765"}


id: PBO:0065852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 3","termid":"PBO:0065852"}


id: PBO:0085033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-canonical poly(A) polymerase; involved in nuclear RNA degradation as a component of TRAMP; catalyzes polyadenylation of hypomodified tRNAs, and snoRNA and rRNA precursors; required for mRNA surveillance and maintenance of genome integrity, serving as a link between RNA and DNA metabolism; overlapping but non-redundant functions with Trf5p; relocalizes to cytosol in response to hypoxia","termid":"PBO:0085033"}


id: GO:0006304
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045007"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotide sites in DNA, resulting in a change in its properties.","definition_xrefs":["GOC:jl","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006304","terms_by_termid":{"GO:0045007":null}}


id: PBO:0001056
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.50","termid":"PBO:0001056"}


id: PBO:0054357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1750","termid":"PBO:0054357"}


id: MONDO:0001899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congestive heart failure","termid":"MONDO:0005009"},{"relation_name":"is_a","term_name":"rheumatic heart disease","termid":"MONDO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"rheumatic congestive heart failure","secondary_identifiers":["ICD10CM:I09.81","ICD9:398.91","MEDGEN:510028","SCTID:82523003","UMLS:C0155582","DOID:14172"],"synonyms":[{"name":"congestive rheumatic heart failure","type":"exact"},{"name":"rheumatic heart failure","type":"exact"},{"name":"rheumatic heart failure (congestive)","type":"exact"}],"termid":"MONDO:0001899","xrefs":{"Monarch":{"xref_id":"0001899"}}}


id: GO:0035508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of myosin-light-chain-phosphatase activity.","definition_xrefs":["GOC:bf","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of myosin-light-chain-phosphatase activity (obsolete GO:0035508)","termid":"GO:0035508"}


id: MONDO:0060707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ververi-Brady syndrome","secondary_identifiers":["MEDGEN:1647785","GARD:18015","UMLS:C4693824","Orphanet:580940","OMIM:617982"],"synonyms":[{"name":"VERBRAS","type":"related"},{"name":"Ververi-Brady syndrome","type":"exact"}],"termid":"MONDO:0060707","xrefs":{"Monarch":{"xref_id":"0060707"}}}


id: PBO:0083993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutathione peroxidase; functions as hydroperoxide receptor to sense intracellular hydroperoxide levels and transduce redox signal to Yap1p transcription factor; glutathione peroxidase activity is neuroprotective in models of Huntington's disease; HYR1 has a paralog, GPX1, that arose from the whole genome duplication","termid":"PBO:0083993"}


id: GO:1990871
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is involved in the assembly of the V-ATPase complex. In the budding yeast Saccharomyces cerevisiae, this complex consists of Vma12p and Vma22p.","definition_xrefs":["PMID:9660861","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Vma12-Vma22 assembly complex","termid":"GO:1990871"}


id: PBO:0051637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP U3 small nucleolar ribonucleoprotein 3","termid":"PBO:0051637"}


id: PBO:0065984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1K pseudogene","termid":"PBO:0065984"}


id: PBO:0057576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 873","termid":"PBO:0057576"}


id: PBO:0076229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT20 homolog, SAGA complex component","termid":"PBO:0076229"}


id: MONDO:0014183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 23, autosomal recessive","secondary_identifiers":["MEDGEN:815812","GARD:18198","OMIM:615431","UMLS:C3809482"],"synonyms":[{"name":"MYP23","type":"related"},{"name":"myopia 23, autosomal recessive","type":"exact"}],"termid":"MONDO:0014183","xrefs":{"Monarch":{"xref_id":"0014183"}}}


id: MONDO:0010498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"MEND syndrome","secondary_identifiers":["OMIM:300960","Orphanet:401973","UMLS:C4085243","GARD:17666","MEDGEN:905986","DOID:0111865"],"synonyms":[{"name":"MEND","type":"related"},{"name":"MEND syndrome","type":"exact"},{"name":"MEND syndrome, X-linked recessive","type":"exact"},{"name":"Male EBP disorder with neurologic defects","type":"related"},{"name":"Male EBP disorder with neurological defects","type":"exact"}],"termid":"MONDO:0010498","xrefs":{"Monarch":{"xref_id":"0010498"}}}


id: FYPO:0002594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation occurs to a greater extent than normal. All histone phosphorylation may be affected, or phosphorylation of specific sites on specific histones may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased histone phosphorylation during vegetative growth","synonyms":[{"name":"increased histone phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002594"}


id: GO:0018075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of phenylalanine.","definition_xrefs":["RESID:AA0174","RESID:AA0175","RESID:AA0176"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-phenylalanine bromination (obsolete GO:0018075)","termid":"GO:0018075"}


id: MONDO:0032757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 41","secondary_identifiers":["OMIM:618449","MEDGEN:1680404","DOID:0111858","GARD:16353","UMLS:C5193103"],"synonyms":[{"name":"CILD41","type":"related"},{"name":"CILIARY DYSKINESIA, PRIMARY, 41","type":"related"}],"termid":"MONDO:0032757","xrefs":{"Monarch":{"xref_id":"0032757"}}}


id: PBO:0045469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D5 pseudogene 1","termid":"PBO:0045469"}


id: GO:0018687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biphenyl + NADH + H+ + O2 = (2R,3S)-3-phenylcyclohexa-3,5-diene-1,2-diol + NAD+. This reaction requires Fe2+.","definition_xrefs":["EC:1.14.12.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"biphenyl 2,3-dioxygenase activity","secondary_identifiers":["RHEA:18165","MetaCyc:1.14.12.18-RXN","UM-BBD_enzymeID:r0388"],"synonyms":[{"name":"biphenyl dioxygenase activity","type":"related"},{"name":"biphenyl,NADH:oxygen oxidoreductase (2,3-hydroxylating)","type":"related"}],"termid":"GO:0018687"}


id: GO:0102057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-valine + ATP(4-) + a jasmonic acid = AMP(2-) + diphosphoric acid + a jasmonoyl-valine.","definition_xrefs":["GOC:pz","PMID:17291501"],"gene_count":0,"genotype_count":0,"name":"obsolete jasmonoyl-valine synthetase activity (obsolete GO:0102057)","termid":"GO:0102057"}


id: PBO:0059414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36","termid":"PBO:0059414"}


id: PBO:0051419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-18","termid":"PBO:0051419"}


id: MONDO:0001401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female breast carcinoma","termid":"MONDO:0004379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"female breast nipple and areola cancer","secondary_identifiers":["MEDGEN:507933","UMLS:C0024621","DOID:11889","ICD9:174.0","SCTID:188147009"],"synonyms":[{"name":"malignant neoplasm of nipple and areola of female breast","type":"exact"},{"name":"malignant neoplasm of nipple or areola of female breast","type":"exact"}],"termid":"MONDO:0001401","xrefs":{"Monarch":{"xref_id":"0001401"}}}


id: PBO:0001714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type","termid":"PBO:0001714"}


id: PBO:0029370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029370"}


id: PBO:0052400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 1","termid":"PBO:0052400"}


id: MOD:01831
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxamidomethyl-L-cysteine sulfone.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxamidomethyl-L-cysteine","termid":"MOD:01060"},{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"sulfur dioxygenated residue","termid":"MOD:01855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-carboxamidomethyl-L-cysteine sulfone","synonyms":[{"name":"CamCO2","type":"exact"},{"name":"S-carbamoylmethyl-L-cysteine sulfone","type":"exact"}],"termid":"MOD:01831"}


id: MONDO:0019094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital Epstein-Barr virus (EBV) infection causes no clinical manifestations in the majority of infants. Indeed, the occurrence of congenital infection with EBV has never been demonstrated conclusively and must be very rare. One case have been reported to present after birth, multiple congenital anomalies (micrognathia, cryptorchidism, central cataracts), dystrophy, generalized hypotonia, hepatosplenomegaly, diffuse petechiae and hematomas and multiple areas of metaphysitis of the long bones at birth. A low birth weight was also reported. No specific follow-up of the fetus is recommended following maternal EBV primary-infection.","definition_xrefs":["Orphanet:70596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"infectious embryofetopathy","termid":"MONDO:0016511"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital Epstein-Barr virus infection","secondary_identifiers":["SCTID:716660007","GARD:18903","icd11.foundation:1861788994","MEDGEN:908580","UMLS:C4274357"],"synonyms":[{"name":"antenatal EBV infection","type":"exact"},{"name":"antenatal Epstein-Barr virus infection","type":"exact"},{"name":"congenital EBV infection","type":"exact"},{"name":"mother-to-child transmission of Epstein-Barr virus infection","type":"exact"}],"termid":"MONDO:0019094","xrefs":{"Monarch":{"xref_id":"0019094"}}}


id: PBO:0046191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELMO domain containing 2","termid":"PBO:0046191"}


id: GO:0070410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a common mediator SMAD signaling protein.","definition_xrefs":["GOC:BHF","PMID:19114992","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMAD binding","termid":"GO:0046332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"co-SMAD binding","synonyms":[{"name":"common mediator SMAD binding","type":"exact"},{"name":"common partner SMAD binding","type":"exact"},{"name":"common-mediator SMAD binding","type":"exact"},{"name":"common-partner SMAD binding","type":"exact"}],"termid":"GO:0070410"}


id: GO:0003394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix that contributes to the process of retrograde extension of a dendrite.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in retrograde extension","termid":"GO:0003392"},{"relation_name":"part_of","term_name":"dendrite development by retrograde extension","termid":"GO:0003390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell adhesion involved in dendrite retrograde extension","termid":"GO:0003394"}


id: MONDO:1010321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal detachment that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal detachment, non-human animal","secondary_identifiers":["OMIA:000275"],"termid":"MONDO:1010321","xrefs":{"Monarch":{"xref_id":"1010321"}}}


id: GO:0043852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: monomethylamine + a monomethylamine corrinoid protein = a methylated monomethylamine corrinoid protein + NH3.","definition_xrefs":["PMID:9195968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"monomethylamine methyltransferase activity","secondary_identifiers":["EC:2.1.1.248","RHEA:26059","MetaCyc:RXN-8098"],"synonyms":[{"name":"MMAMT","type":"related"},{"name":"MtmB","type":"related"},{"name":"monomethylamine:corrinoid methyltransferase activity","type":"exact"}],"termid":"GO:0043852"}


id: GO:0005651
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete exportin (obsolete GO:0005651)","synonyms":[{"name":"exportin","type":"exact"}],"termid":"GO:0005651"}


id: PBO:0064227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C gamma 1","termid":"PBO:0064227"}


id: PBO:0066363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RD3 like","termid":"PBO:0066363"}


id: PBO:0072372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 58","termid":"PBO:0072372"}


id: MONDO:0024474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A precancerous neoplastic process that affects the squamous, glandular, or transitional cell epithelium without evidence of invasion. According to the degree of nuclear atypia, number of mitotic figures, and presence of architectural distortion, it is classified as low grade (mild dysplasia) or high grade (moderate or severe dysplasia).","definition_xrefs":["NCIT:C8366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"},{"relation_name":"is_a","term_name":"precancerous condition","termid":"MONDO:0021074"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraepithelial neoplasia","secondary_identifiers":["UMLS:C0878500","MEDGEN:164203"],"synonyms":[{"name":"epithelial dysplasia","type":"exact"},{"name":"intraepithelial neoplasia","type":"exact"},{"name":"intraepithelial neoplasm","type":"exact"}],"termid":"MONDO:0024474","xrefs":{"Monarch":{"xref_id":"0024474"}}}


id: GO:1905354
data:
  {"annotated_genes":["SJAG_04824","SJAG_01818","SJAG_02374","SJAG_02275","SJAG_01910","SJAG_03789","SJAG_04006","SJAG_03179","SJAG_06586","SJAG_01521","SJAG_04321","SJAG_02991","SJAG_01191","SJAG_01431","SJAG_00854","SJAG_02808","SJAG_04084","SJAG_01581","SJAG_04818","SJAG_03745","SJAG_00966","SJAG_04153"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71608,72862,74719,75428,72069,116178,76674,73583,78046,74944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000177"},{"annotations":[64846,92034,95295,118853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090730"},{"annotations":[114732,71058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045025"},{"annotations":[71607,115742,72068,73582,76673,78045,74718,73846,74943,75427,101351,71236,72861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000176"},{"annotations":[70708,79302,77940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031251"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of exoribonuclease activity.","definition_xrefs":["GOC:bhm","GO_REF:0000088","PMID:17174896","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_00966":null,"SJAG_01191":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01581":null,"SJAG_01818":null,"SJAG_01910":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02808":null,"SJAG_02991":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_03789":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"exoribonuclease complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1905354","terms_by_termid":{"GO:0000176":null,"GO:0000177":null,"GO:0031251":null,"GO:0045025":null,"GO:0090730":null}}


id: PR:O74797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2D10.03c gene.","definition_xrefs":["UniProtKB:O74797","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0587 protein C2D10.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.03c","synonyms":[{"name":"Spom972h-SPBC2D10.03c","type":"exact"}],"termid":"PR:O74797"}


id: PBO:0069869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1156, pseudogene","termid":"PBO:0069869"}


id: MONDO:0009790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Opticocochleodentate degeneration","secondary_identifiers":["MEDGEN:101046","MESH:C563002","ICD9:333.90","OMIM:258700","SCTID:77553008","UMLS:C0520711"],"synonyms":[{"name":"Opticocochleodentate degeneration","type":"exact"}],"termid":"MONDO:0009790","xrefs":{"Monarch":{"xref_id":"0009790"}}}


id: PBO:0028769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_reactive_oxygen_species_level_during_vegetative_growth","termid":"PBO:0028769"}


id: GO:1904445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of Sertoli cell barrier.","definition_xrefs":["PMID:18057314","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of establishment of Sertoli cell barrier","termid":"GO:1904444"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"establishment of Sertoli cell barrier","termid":"GO:0097368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of Sertoli cell barrier","synonyms":[{"name":"down regulation of establishment of BTB","type":"exact"},{"name":"down regulation of establishment of SCB","type":"exact"},{"name":"down regulation of establishment of Sertoli cell barrier","type":"exact"},{"name":"down regulation of establishment of blood-testis barrier","type":"exact"},{"name":"down-regulation of establishment of BTB","type":"exact"},{"name":"down-regulation of establishment of SCB","type":"exact"},{"name":"down-regulation of establishment of Sertoli cell barrier","type":"exact"},{"name":"down-regulation of establishment of blood-testis barrier","type":"exact"},{"name":"downregulation of establishment of BTB","type":"exact"},{"name":"downregulation of establishment of SCB","type":"exact"},{"name":"downregulation of establishment of Sertoli cell barrier","type":"exact"},{"name":"downregulation of establishment of blood-testis barrier","type":"exact"},{"name":"inhibition of establishment of BTB","type":"narrow"},{"name":"inhibition of establishment of SCB","type":"narrow"},{"name":"inhibition of establishment of Sertoli cell barrier","type":"narrow"},{"name":"inhibition of establishment of blood-testis barrier","type":"narrow"},{"name":"negative regulation of establishment of BTB","type":"exact"},{"name":"negative regulation of establishment of SCB","type":"exact"},{"name":"negative regulation of establishment of blood-testis barrier","type":"exact"}],"termid":"GO:1904445"}


id: PBO:0084578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YBR075W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YBR074W","termid":"PBO:0084578"}


id: MONDO:0005539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Crohn disease involving a pathogenic inflammatory response in the small intestine.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Crohn disease","termid":"MONDO:0005011"},{"relation_name":"is_a","term_name":"enteritis","termid":"MONDO:0043579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"small bowel Crohn disease","secondary_identifiers":["EFO:0005629","NANDO:1200445","UMLS:C0156146","MEDGEN:57617"],"synonyms":[{"name":"small bowel Crohn's disease","type":"exact"}],"termid":"MONDO:0005539","xrefs":{"Monarch":{"xref_id":"0005539"}}}


id: GO:0047873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl phosphate + H2O = dolichol + phosphate.","definition_xrefs":["EC:3.1.3.51","MetaCyc:DOLICHYL-PHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"dolichyl-phosphatase activity","secondary_identifiers":["RHEA:13797"],"synonyms":[{"name":"Dol-P phosphatase activity","type":"related"},{"name":"Dol-P-P phosphohydrolase activity","type":"exact"},{"name":"dolichol monophosphatase activity","type":"related"},{"name":"dolichol phosphatase activity","type":"related"},{"name":"dolichol phosphate phosphatase activity","type":"related"},{"name":"dolichyl monophosphate phosphatase activity","type":"related"},{"name":"dolichyl phosphate phosphatase activity","type":"related"},{"name":"dolichyl pyrophosphate phosphatase activity","type":"exact"},{"name":"dolichyl-phosphate phosphohydrolase activity","type":"related"},{"name":"polyisoprenyl phosphate phosphatase activity","type":"related"},{"name":"polyprenylphosphate phosphatase activity","type":"related"}],"termid":"GO:0047873"}


id: PBO:0066588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho related BTB domain containing 3","termid":"PBO:0066588"}


id: PBO:0060506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAP1L5 pseudogene 1","termid":"PBO:0060506"}


id: GO:0031336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving sulfur amino acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur amino acid metabolic process","termid":"GO:0031335"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"negative regulation of sulfur amino acid metabolic process","synonyms":[{"name":"down regulation of sulfur amino acid metabolic process","type":"exact"},{"name":"down-regulation of sulfur amino acid metabolic process","type":"exact"},{"name":"downregulation of sulfur amino acid metabolic process","type":"exact"},{"name":"inhibition of sulfur amino acid metabolic process","type":"narrow"},{"name":"negative regulation of sulfur amino acid metabolism","type":"exact"}],"termid":"GO:0031336"}


id: PBO:0081760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 691","termid":"PBO:0081760"}


id: PBO:0046490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroferrone","termid":"PBO:0046490"}


id: PBO:0035822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_island_during_vegetative_growth","termid":"PBO:0035822"}


id: GO:0002354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process leading to negative selection of B cells in the bone marrow.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central B cell selection","termid":"GO:0002340"},{"relation_name":"is_a","term_name":"B cell negative selection","termid":"GO:0002352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell negative selection","synonyms":[{"name":"central B lymphocyte negative selection","type":"exact"},{"name":"central B-cell negative selection","type":"exact"},{"name":"central B-lymphocyte negative selection","type":"exact"}],"termid":"GO:0002354"}


id: GO:2001256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of store-operated calcium entry.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"regulates","term_name":"store-operated calcium entry","termid":"GO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of store-operated calcium entry","synonyms":[{"name":"regulation of SOCE","type":"exact"},{"name":"regulation of calcium ion import","type":"related"},{"name":"regulation of capacitative calcium entry","type":"exact"},{"name":"regulation of store-operated calcium import","type":"exact"}],"termid":"GO:2001256"}


id: FYPO:0006050
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic sister chromatid separation is normal (i.e. indistinguishable from wild type). Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic sister chromatid separation","termid":"FYPO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal rate of mitotic sister chromatid separation","synonyms":[{"name":"normal mitotic sister chromatid separation rate","type":"exact"},{"name":"normal rate of mitotic sister chromatid separation during vegetative growth","type":"exact"},{"name":"normal rate of sister chromatid separation during mitosis","type":"exact"},{"name":"normal rate of sister chromatid separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006050"}


id: MONDO:0004820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, usually encapsulated slow growing tumor of the peripheral nervous system composed of Schwann cells. It recurs infrequently and only rare cases associated with malignant transformation have been reported.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral nerve schwannoma","secondary_identifiers":["NCIT:C41430","DOID:956","MEDGEN:274155","UMLS:C1519001"],"synonyms":[{"name":"peripheral nerve schwannoma","type":"exact"}],"termid":"MONDO:0004820","xrefs":{"Monarch":{"xref_id":"0004820"}}}


id: GO:0000774
data:
  {"annotated_genes":["SJAG_01737","SJAG_04511","SJAG_04014","SJAG_02875","SJAG_01556","SJAG_04817","SJAG_01510"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70378,70925,71279,76871,79024,104733,111168],"is_not":false,"summary":null,"term":"GO:0000774"}]},"cv_name":"molecular_function","definition":"Binds to and stimulates the hydrolysis and exchange of adenyl nucleotides by other proteins.","definition_xrefs":["GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase regulator activity","termid":"GO:0060590"},{"relation_name":"negatively_regulates","term_name":"ADP binding","termid":"GO:0043531"},{"relation_name":"positively_regulates","term_name":"ATP binding","termid":"GO:0005524"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01510":null,"SJAG_01556":null,"SJAG_01737":null,"SJAG_02875":null,"SJAG_04014":null,"SJAG_04511":null,"SJAG_04817":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"adenyl-nucleotide exchange factor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5252079"],"termid":"GO:0000774","terms_by_termid":{"GO:0000774":null}}


id: GO:0006778
data:
  {"annotated_genes":["SJAG_04397","SJAG_00699","SJAG_01372","SJAG_00366","SJAG_03961","SJAG_01786","SJAG_04515","SJAG_01155","SJAG_00097","SJAG_01841","SJAG_04944","SJAG_02876","SJAG_03862","SJAG_02896","SJAG_04109","SJAG_01192","SJAG_05283","SJAG_03173"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80403,78714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[105512,112183,114179,101409,74700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[106916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"},{"annotations":[80273,64832,63148,63010,59191,67756,57224,60268],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[71735,77145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"},{"annotations":[75132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any member of a large group of derivatives or analogs of porphyrin. Porphyrins consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.","definition_xrefs":["Wikipedia:Porphyrin#Natural_formation","GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00366":null,"SJAG_00699":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04515":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"porphyrin-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-189445"],"synonyms":[{"name":"porphyrin metabolic process","type":"related"},{"name":"porphyrin metabolism","type":"related"}],"termid":"GO:0006778","terms_by_termid":{"GO:0006780":null,"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null,"GO:0042167":null}}


id: GO:0022619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a generative cell. The generative cell gives rise to the sperm cells in the male gametophyte.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"microgametogenesis","termid":"GO:0055046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"generative cell differentiation","termid":"GO:0022619"}


id: PBO:0069288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 544, pseudogene","termid":"PBO:0069288"}


id: GO:0035572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dimethylation of the N-terminal serine of proteins to form the derivative N,N-dimethylserine.","definition_xrefs":["PMID:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-serine methylation","termid":"GO:0035570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-serine dimethylation","termid":"GO:0035572"}


id: PBO:0001695
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein destruction box","termid":"PBO:0001695"}


id: MONDO:0008787
data:
  {"annotated_genes":["SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85447],"is_not":false,"summary":null,"term":"MONDO:0008787"}]},"cv_name":"mondo","definition":"Congenital hypochromic microcytic anemia with progressive liver iron overload paradoxically associated with normal to moderately elevated serum ferritin levels has been described in three unrelated patients.","definition_xrefs":["Orphanet:83642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia, hypochromic microcytic with iron overload","termid":"MONDO:0000104"},{"relation_name":"is_a","term_name":"hereditary anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"disorder of iron metabolism and transport","termid":"MONDO:0017763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"microcytic anemia with liver iron overload","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:206100","UMLS:C3806153","SCTID:711161006","GARD:12360","MEDGEN:812483"],"synonyms":[{"name":"AHMIO1","type":"related"},{"name":"anemia, hypochromic microcytic, with iron overload 1","type":"related"},{"name":"anemia, hypochromic microcytic, with iron overload type 1","type":"exact"},{"name":"hypochromic microcytic anaemia with iron overload","type":"related"},{"name":"hypochromic microcytic anemia with iron overload","type":"related"},{"name":"microcytic anaemia and hepatic iron overload","type":"related"},{"name":"microcytic anemia and hepatic iron overload","type":"related"}],"termid":"MONDO:0008787","terms_by_termid":{"MONDO:0008787":null},"xrefs":{"Monarch":{"xref_id":"0008787"}}}


id: PBO:0059960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 5","termid":"PBO:0059960"}


id: PBO:0068820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 58, pseudogene","termid":"PBO:0068820"}


id: PBO:0063166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAX3 and PAX7 binding protein 1","termid":"PBO:0063166"}


id: PBO:0030824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mating_cassette_duplication","termid":"PBO:0030824"}


id: PBO:0078369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 13-1","termid":"PBO:0078369"}


id: PBO:0070076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 33, pseudogene","termid":"PBO:0070076"}


id: PBO:0015688
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae PRP6","termid":"PBO:0015688"}


id: MONDO:0859311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, demyelinating, type 1J","secondary_identifiers":["MEDGEN:1824022","UMLS:C5774249","OMIM:620111"],"termid":"MONDO:0859311","xrefs":{"Monarch":{"xref_id":"0859311"}}}


id: PBO:0070342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 15","termid":"PBO:0070342"}


id: GO:0061816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective degradation of proteasomes by macroautophagy.","definition_xrefs":["GOC:se","PMID:26670610","GOC:dph","PMID:27477278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"proteaphagy","termid":"GO:0061816"}


id: GO:0009558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the eight-nucleate single celled female gametophyte develops into the seven-celled female gametophyte. This mature structure contains two synergid cells and an egg cell at the micropylar end, and three antipodal cells at the other end. A binucleate endosperm mother cell is formed at the center. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:jid","GOC:mtg_plant","ISBN:047186840X","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellularization","termid":"GO:0007349"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo sac cellularization","secondary_identifiers":["GO:0009797"],"synonyms":[{"name":"cellularization of the embryo sac","type":"exact"},{"name":"female gametophyte cellularization","type":"exact"},{"name":"megagametophyte cellularization","type":"exact"}],"termid":"GO:0009558"}


id: MONDO:0016654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 5 syndrome is a rare chromosomal anomaly syndrome, with high phenotypic variability, principally characterized by a neonatal mewing cry, severe developmental delay and intellectual disability, short stature, hypotonia, dysmorphic features (incl. microcephaly, facial asymmetry, hypertelorism, epicanthal folds, abnormal ears, micro/retrognathia), congenital cardiac anomalies (such as atrial and ventricular septal defect, tricuspid insufficiency, hypoplastic aorta) and skeletal abnormalities (e.g. hypoplastic thumbs, anomalous ulna/radius, dysplastic metacarpals and phalanges).","definition_xrefs":["Orphanet:251043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 5 disorder","termid":"MONDO:0700012"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 5","secondary_identifiers":["GARD:10841","NCIT:C121984","SCTID:765487008","UMLS:C4050064","MEDGEN:881956"],"synonyms":[{"name":"R5","type":"related"},{"name":"Ring 5","type":"related"},{"name":"Ring chromosome 5 syndrome","type":"related"},{"name":"Ring chromosome type 5","type":"exact"},{"name":"chromosome 5 ring","type":"related"},{"name":"rose cluster 5","type":"exact"}],"termid":"MONDO:0016654","xrefs":{"Monarch":{"xref_id":"0016654"}}}


id: PBO:0049412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2C","termid":"PBO:0049412"}


id: MONDO:0016165
data:
  {"annotated_genes":["SJAG_04978"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"}]},"cv_name":"mondo","definition":"An instance of hypoparathyroidism that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoparathyroidism","termid":"MONDO:0001220"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04978":null},"genotype_count":0,"is_obsolete":false,"name":"hereditary hypoparathyroidism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20407","Orphanet:208593","MEDGEN:1842344","UMLS:C5680825"],"synonyms":[{"name":"genetic hypoparathyroidism","type":"exact"}],"termid":"MONDO:0016165","terms_by_termid":{"MONDO:0011301":null},"xrefs":{"Monarch":{"xref_id":"0016165"}}}


id: PBO:0038900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor B2","termid":"PBO:0038900"}


id: PBO:0028774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_sodium_nitroprusside","termid":"PBO:0028774"}


id: GO:0102637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-ammoniolevulinate + coenzyme A + ATP = 5-aminolevulinyl-CoA + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-aminolevulinate-CoA ligase activity (obsolete GO:0102637)","termid":"GO:0102637"}


id: GO:0000196
data:
  {"annotated_genes":["SJAG_04666","SJAG_00610","SJAG_04551","SJAG_01181","SJAG_03263","SJAG_01787","SJAG_03969","SJAG_00424","SJAG_04825","SJAG_01114","SJAG_04522","SJAG_03705","SJAG_05000","SJAG_02392","SJAG_03753"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92604,102458,111288],"is_not":false,"summary":null,"term":"GO:0000196"},{"annotations":[99763,118617,107361,107920,96184,104116],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903138"},{"annotations":[92759,118209,91108,88426,103157,89779],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903139"}]},"cv_name":"biological_process","definition":"A MAPK cascade that specifically ensures the maintenance and regulation of cellular structure in response to external signals, including plasma membrane stretching or cell wall alteration, to coordinate cellular responses such as growth, differentiation, and stress adaptation, thereby preserving cell integrity. Contains the  SLT2 (S.cerevisiae)/Pmk1 (S.pombe) MAP kinase or orthologs.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stress-activated MAPK cascade","termid":"GO:0051403"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01114":null,"SJAG_01181":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_03705":null,"SJAG_03753":null,"SJAG_03969":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell integrity MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CWI pathway","type":"related"},{"name":"Mpk1 cascade","type":"narrow"},{"name":"PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"Slt2 cascade","type":"narrow"},{"name":"cell integrity MAPK pathway","type":"exact"},{"name":"cell wall integrity MAPK cascade","type":"narrow"}],"termid":"GO:0000196","terms_by_termid":{"GO:0000196":null,"GO:1903138":null,"GO:1903139":null}}


id: MONDO:0005698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinical diagnosis presenting with painless cervical dilatation and spontaneous mid-trimester birth in recurrent pregnancies in the absence of spontaneous membrane rupture, bleeding or clinical chorioamnionitis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical incompetence","secondary_identifiers":["EFO:0007202","DOID:9681","MEDGEN:2972","ICD9:622.5","ICD9:654.50","MESH:D002581","SCTID:17382005","UMLS:C0007871"],"termid":"MONDO:0005698","xrefs":{"Monarch":{"xref_id":"0005698"}}}


id: GO:0009222
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyrimidine ribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide catabolic process","termid":"GO:0006244"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"},{"relation_name":"is_a","term_name":"ribonucleotide catabolic process","termid":"GO:0009261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine ribonucleotide breakdown","type":"exact"},{"name":"pyrimidine ribonucleotide catabolism","type":"exact"},{"name":"pyrimidine ribonucleotide degradation","type":"exact"}],"termid":"GO:0009222","terms_by_termid":{"GO:0006256":null}}


id: MONDO:0018675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A IgG4-related disease that involves the eye.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"IgG4-related disease","termid":"MONDO:0017287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005328"],"is_obsolete":false,"name":"IgG4-related ophthalmic disorder","secondary_identifiers":["GARD:21885","Orphanet:449563","UMLS:C5569009","MEDGEN:1800432"],"synonyms":[{"name":"IgG4-related disease of eye","type":"exact"},{"name":"eye IgG4-related disease","type":"exact"}],"termid":"MONDO:0018675","xrefs":{"Monarch":{"xref_id":"0018675"}}}


id: PBO:0068115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 422","termid":"PBO:0068115"}


id: PR:P54280
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mismatch repair endonuclease PMS2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01675","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA mismatch repair protein pms1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.02c","secondary_identifiers":["UniProtKB:P54280"],"synonyms":[{"name":"Spom972h-PMS2","type":"exact"}],"termid":"PR:P54280"}


id: GO:0048621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the post-embryonic phase, by which the anatomical structures of the digestive tract are generated and organized. The digestive tract is the anatomical structure through which food passes and is processed.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"digestive tract morphogenesis","termid":"GO:0048546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic digestive tract morphogenesis","synonyms":[{"name":"post-embryonic gut morphogenesis","type":"broad"}],"termid":"GO:0048621"}


id: GO:0005216
data:
  {"annotated_genes":["SJAG_05342","SJAG_00915","SJAG_02019","SJAG_01168","SJAG_MIT09","SJAG_00985","SJAG_00438","SJAG_05229","SJAG_02105","SJAG_00133","SJAG_00048","SJAG_04471","SJAG_MIT37","SJAG_04122","SJAG_MIT15","SJAG_03925","SJAG_02322","SJAG_05204","SJAG_02564","SJAG_00542","SJAG_02877","SJAG_04668","SJAG_03895","SJAG_02532","SJAG_01090","SJAG_02598","SJAG_03114","SJAG_07003","SJAG_00836"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114742,77592,72693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005262"},{"annotations":[80187,73394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"},{"annotations":[70761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[99953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[104082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[96018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008381"},{"annotations":[95183,94212,79566,75913,119376,73132,102135,119369,70411,93629,108120,119363,70256,108212,78387,78181,57851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"},{"annotations":[92748,114231,92690,99954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"},{"annotations":[72013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the facilitated diffusion of a monoatomic ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. May be either selective (it enables passage of a specific ion only) or non-selective (it enables passage of two or more ions of same charge but different size).","definition_xrefs":["GOC:cy","GOC:mtg_transport","ISBN:0815340729","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transporter activity","termid":"GO:0015075"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01090":null,"SJAG_01168":null,"SJAG_02019":null,"SJAG_02105":null,"SJAG_02322":null,"SJAG_02532":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02877":null,"SJAG_03114":null,"SJAG_03895":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04471":null,"SJAG_04668":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_05342":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"monoatomic ion channel activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ion channel activity","type":"broad"}],"termid":"GO:0005216","terms_by_termid":{"GO:0005227":null,"GO:0005254":null,"GO:0005262":null,"GO:0008308":null,"GO:0008331":null,"GO:0008381":null,"GO:0015275":null,"GO:0046933":null,"GO:0140135":null}}


id: MONDO:1011706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical thrombasthenia, non-human animal","secondary_identifiers":["OMIA:002272"],"termid":"MONDO:1011706","xrefs":{"Monarch":{"xref_id":"1011706"}}}


id: MONDO:0003068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the postauricular lymph nodes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphadenitis","termid":"MONDO:0002052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"postauricular lymphadenitis","secondary_identifiers":["DOID:4638","MEDGEN:183076","UMLS:C0919638","NCIT:C27332"],"synonyms":[{"name":"lymphadenitis (disease) of mastoid lymph node","type":"exact"},{"name":"mastoid lymph node lymphadenitis (disease)","type":"exact"}],"termid":"MONDO:0003068","xrefs":{"Monarch":{"xref_id":"0003068"}}}


id: FYPO:0007478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a region of the genome that is normally stably assembled and maintained as heterochromatin over successive generations retains heterochromatic structure for fewer generations than normal.","definition_xrefs":["PMID:29899117","PomBase:mah","PMID:31278118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal epigenetic heterochromatin inheritance","termid":"FYPO:0007477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007477"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0007477","FYPO:0001985"],"is_obsolete":false,"name":"decreased epigenetic heterochromatin inheritance","synonyms":[{"name":"decreased PEV","type":"related"},{"name":"decreased epigenetic heterochromatin propagation","type":"exact"},{"name":"epigenetic inheritance of heterochromatin","type":"exact"},{"name":"reduced epigenetic heterochromatin inheritance","type":"exact"}],"termid":"FYPO:0007478"}


id: GO:1904343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of colon smooth muscle contraction.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24170253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904306"},{"relation_name":"is_a","term_name":"regulation of colon smooth muscle contraction","termid":"GO:1904341"},{"relation_name":"positively_regulates","term_name":"colon smooth muscle contraction","termid":"GO:1990765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of colon smooth muscle contraction","synonyms":[{"name":"activation of colon smooth muscle contraction","type":"narrow"},{"name":"up regulation of colon smooth muscle contraction","type":"exact"},{"name":"up-regulation of colon smooth muscle contraction","type":"exact"},{"name":"upregulation of colon smooth muscle contraction","type":"exact"}],"termid":"GO:1904343"}


id: PBO:0034037
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubmed_abstract","termid":"PBO:0034037"}


id: GO:0047434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indolepyruvate = CO2 + indole acetaldehyde.","definition_xrefs":["EC:4.1.1.74","MetaCyc:4.1.1.74-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"indolepyruvate decarboxylase activity","secondary_identifiers":["RHEA:18017"],"synonyms":[{"name":"3-(indol-3-yl)pyruvate carboxy-lyase [(2-indol-3-yl)acetaldehyde-forming]","type":"related"},{"name":"3-(indol-3-yl)pyruvate carboxy-lyase activity","type":"related"},{"name":"indol-3-yl-pyruvate carboxy-lyase activity","type":"related"},{"name":"indole-3-pyruvate decarboxylase activity","type":"related"}],"termid":"GO:0047434"}


id: GO:0004823
data:
  {"annotated_genes":["SJAG_04738","SJAG_02015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76125,78334],"is_not":false,"summary":null,"term":"GO:0004823"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: leucine + ATP + tRNA(Leu) = AMP + diphosphate + 2 H+ + Leu-tRNA(Leu).","definition_xrefs":["RHEA:11688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02015":null,"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0140098","GO:0003674","GO:0140101"],"is_obsolete":false,"name":"leucine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-380200","Reactome:R-HSA-379974","KEGG_REACTION:R03657","MetaCyc:LEUCINE--TRNA-LIGASE-RXN","EC:6.1.1.4"],"synonyms":[{"name":"leucine translase activity","type":"related"},{"name":"leucine-tRNA synthetase activity","type":"related"},{"name":"leucine:tRNALeu ligase (AMP-forming)","type":"related"},{"name":"leucyl-tRNA synthetase activity","type":"exact"},{"name":"leucyl-transfer RNA synthetase activity","type":"related"},{"name":"leucyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"leucyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004823","terms_by_termid":{"GO:0004823":null}}


id: MONDO:0700229
data:
  {"annotated_genes":["SJAG_02712","SJAG_03557"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86199,86198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013611"}]},"cv_name":"mondo","definition":"Any retinopathy caused by variants in the MAK gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02712":null,"SJAG_03557":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"MAK-related retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"MAK-related retinopathy","type":"exact"}],"termid":"MONDO:0700229","terms_by_termid":{"MONDO:0013611":null},"xrefs":{"Monarch":{"xref_id":"0700229"}}}


id: PBO:0048281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 16","termid":"PBO:0048281"}


id: PBO:0034574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_stable_microtubule_bundle","termid":"PBO:0034574"}


id: GO:0002489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class Ib protein complex following intracellular transport via a TAP (transporter associated with antigen processing) pathway. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell and is dependent on TAP transport from the cytosol to ER for association with the MHC class Ib molecule. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["PMID:15928678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","termid":"GO:0002488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent","synonyms":[{"name":"TAP-dependent antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","type":"exact"},{"name":"TAP-dependent endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway","type":"exact"},{"name":"endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway, TAP-dependent","type":"exact"}],"termid":"GO:0002489"}


id: PBO:0060801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 7","termid":"PBO:0060801"}


id: MONDO:0017364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"POEMS syndrome is a paraneoplastic syndrome characterized by polyradiculoneuropathy (P), organomegaly (O), endocrinopathy (E), clonal plasma cell disorder (M), and skin changes (S). Other features include papilledema, extravascular volume overload, sclerotic bone lesions, thrombocytosis/erythrocytosis, and elevated VEGF levels.","definition_xrefs":["Orphanet:2905","PMID:23398538"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type IV hypersensitivity disease","termid":"MONDO:0002459"},{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"acquired peripheral neuropathy","termid":"MONDO:0015923"},{"relation_name":"is_a","term_name":"paraneoplastic neurologic syndrome","termid":"MONDO:0018215"},{"relation_name":"is_a","term_name":"parneoplastic endocrine syndrome","termid":"MONDO:0700252"},{"relation_name":"is_a","term_name":"paraneoplastic hematological syndrome","termid":"MONDO:0700253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005244","MONDO:0005570"],"is_obsolete":false,"name":"POEMS syndrome","secondary_identifiers":["NCIT:C80303","UMLS:C0085404","MESH:D016878","NORD:1586","MEDGEN:39276","icd11.foundation:1555299114","DOID:14039","EFO:1001115","NANDO:1200033","SCTID:79268002","GARD:7411","MedDRA:10053869"],"synonyms":[{"name":"Crow-Fukase syndrome","type":"exact"},{"name":"PEP syndrome","type":"exact"},{"name":"POEMS syndrome","type":"exact"},{"name":"Takatsuki syndrome","type":"exact"},{"name":"osteosclerotic myeloma","type":"exact"},{"name":"polyneuropathy organomegaly","type":"related"},{"name":"polyneuropathy, organomegaly, endocrinopathy, M protein, and skin changes syndrome","type":"related"},{"name":"polyneuropathy-endocrinopathy-plasma cell dyscrasia syndrome","type":"exact"}],"termid":"MONDO:0017364","xrefs":{"Monarch":{"xref_id":"0017364"}}}


id: MONDO:0003436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lung oat cell carcinoma (obsolete MONDO:0003436)","termid":"MONDO:0003436","xrefs":{"Monarch":{"xref_id":"0003436"}}}


id: GO:0030303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of peptide bonds in collagen with preferential cleavage where P1', P2' and P3' are hydrophobic residues; action on collagen types III, IV and V is weak.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete stromelysin 2 activity (obsolete GO:0030303)","synonyms":[{"name":"MMP-10","type":"exact"},{"name":"matrix metalloproteinase 10 activity","type":"related"},{"name":"proteoglycanase 2","type":"related"},{"name":"stromelysin 2 activity","type":"exact"},{"name":"transin 2 activity","type":"related"}],"termid":"GO:0030303"}


id: PBO:0063681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 5","termid":"PBO:0063681"}


id: MONDO:0044649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005267"],"is_obsolete":false,"name":"omphalocele-diaphragmatic hernia-cardiovascular anomalies-radial ray defect syndrome","secondary_identifiers":["Orphanet:496693","GARD:10354"],"synonyms":[{"name":"Gershoni-Baruch syndrome","type":"exact"}],"termid":"MONDO:0044649","xrefs":{"Monarch":{"xref_id":"0044649"}}}


id: MONDO:0100578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"FANCM Fanconi-like genomic instability disorder is autosomal recessive condition associated with an increased risk of cancer, infertility, and hypersensitivity to cytotoxic agents.","direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi-like syndrome","termid":"MONDO:0009217"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCM Fanconi-like genomic instability disorder","termid":"MONDO:0100578","xrefs":{"Monarch":{"xref_id":"0100578"}}}


id: GO:1990560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a DNA methyltransferase.","definition_xrefs":["PMID:22880885"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methyltransferase binding (obsolete GO:1990560)","synonyms":[{"name":"DNA methyltransferase binding","type":"exact"}],"termid":"GO:1990560"}


id: GO:0106415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"GlcNAc-MurNAc-L-alanyl-gamma-D-glutamyl-meso-diaminopimelyl-D-alanine + H2O = GlcNAc-MurNAc-L-alanyl-gamma-D-glutamyl-meso-diaminopimelate + D-alanine.","definition_xrefs":["PMID:15361936","PMID:10428950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxypeptidase activity","termid":"GO:0004180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0008233","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"muramoyltetrapeptide carboxypeptidase activity","secondary_identifiers":["RHEA:48688","EC:3.4.17.13"],"termid":"GO:0106415"}


id: FYPO:0007510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is abnormally arrested at the mitotic G2/M phase transition in the absence of the mitotic DNA replication checkpoint. The previous S phase is completed, no replication intermediates can be observed, and cells do not undergo rereplication.","definition_xrefs":["PMID:17690116","PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition in absence of mitotic DNA replication checkpoint","synonyms":[{"name":"cell cycle arrest at G2/M phase transition in absence of mitotic DNA replication checkpoint during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest at mitotic G2/M phase transition in absence of mitotic DNA replication checkpoint during vegetative growth","type":"exact"},{"name":"mitotic cell cycle arrest at the G2/M transition with completed S phase","type":"related"}],"termid":"FYPO:0007510"}


id: PBO:0001244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase (predicted)","termid":"PBO:0001244"}


id: GO:0007468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of rhodopsin gene expression. This includes transcriptional, translational, or posttranslational regulation.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of rhodopsin gene expression (obsolete GO:0007468)","synonyms":[{"name":"regulation of rhodopsin gene activity","type":"exact"}],"termid":"GO:0007468"}


id: MONDO:1011027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary neurodegenerative disease affecting peripheral sensory and autonomic neurons in dogs due to a variation in the RETREG1 gene.","definition_xrefs":["PMID:34387380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy, dog","termid":"MONDO:1011007"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory neuropathy, RETREG1-related, dog","secondary_identifiers":["OMIA:002032-9615"],"termid":"MONDO:1011027","xrefs":{"Monarch":{"xref_id":"1011027"}}}


id: PBO:0045723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 6","termid":"PBO:0045723"}


id: MONDO:1012265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"androgen insensitivity syndrome, non-human animal","termid":"MONDO:1011919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen insensitivity syndrome, domestic cat","secondary_identifiers":["OMIA:000991-9685"],"synonyms":[{"name":"AIS, domestic cat","type":"exact"}],"termid":"MONDO:1012265","xrefs":{"Monarch":{"xref_id":"1012265"}}}


id: PBO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA R62 (predicted)","termid":"PBO:0002252"}


id: MONDO:0011570
data:
  {"annotated_genes":["SJAG_02680"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85854],"is_not":false,"summary":null,"term":"MONDO:0011570"}]},"cv_name":"mondo","definition":"Charcot-Marie-Tooth disease, type 2B2 (CMT2B2, also referred to as CMT4C3) is an axonal CMT peripheral sensorimotor polyneuropathy that has been described in a large consanguineous Costa Rican family of Spanish ancestry.","definition_xrefs":["Orphanet:101101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 2B2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:2009111705","MESH:C537991","OMIM:605589","SCTID:719981005","UMLS:C1854150","DOID:0110179","MEDGEN:381352","GARD:1249"],"synonyms":[{"name":"AR-CMT2B2","type":"exact"},{"name":"ARCMT2B","type":"exact"},{"name":"Arcmt2B","type":"related"},{"name":"CMT 2B2","type":"related"},{"name":"CMT2B2","type":"exact"},{"name":"Charcot Marie Tooth disease type 2B2","type":"related"},{"name":"Charcot-Marie-Tooth disease neuronal type 2B2","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2 caused by mutation in MED25","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2B2","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, B2","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2B2","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2B2","type":"related"},{"name":"Charcot-Marie-Tooth disease, neuronal, type 2B2","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 2B2","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2B2","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2B2","type":"related"},{"name":"MED25 Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"autosomal recessive axonal CMT4C3","type":"exact"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth disease type 2B2","type":"exact"}],"termid":"MONDO:0011570","terms_by_termid":{"MONDO:0011570":null},"xrefs":{"Monarch":{"xref_id":"0011570"}}}


id: PBO:0072358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 44","termid":"PBO:0072358"}


id: PBO:0073997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 4","termid":"PBO:0073997"}


id: MONDO:0009308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic granulomatous disease","termid":"MONDO:0018305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-negative","secondary_identifiers":["NANDO:2201280","MESH:C565533","OMIM:233690","UMLS:C1856255","GARD:15175","MEDGEN:383872","DOID:0070193"],"synonyms":[{"name":"CGD due to deficiency of the Alpha Subunit of cytochrome B","type":"related"},{"name":"CGD, autosomal recessive cytochrome B-negative","type":"related"},{"name":"Cyba deficiency","type":"related"},{"name":"chronic granulomatous disease 4, autosomal recessive","type":"exact"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-negative","type":"exact"}],"termid":"MONDO:0009308","xrefs":{"Monarch":{"xref_id":"0009308"}}}


id: FYPO:0001400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, and morphology of cytoplasmic microtubules is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cytoplasmic microtubules during vegetative growth","termid":"FYPO:0001976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal interphase microtubules","synonyms":[{"name":"normal cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubules","type":"exact"},{"name":"normal interphase microtubules during mitotic cell cycle","type":"related"},{"name":"normal interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0001400"}


id: GO:0015051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of X-opioid receptors.","definition_xrefs":["InterPro:IPR001420"],"gene_count":0,"genotype_count":0,"name":"obsolete X-opioid receptor activity (obsolete GO:0015051)","synonyms":[{"name":"X-opioid receptor activity","type":"exact"}],"termid":"GO:0015051"}


id: PBO:0068911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 154, pseudogene","termid":"PBO:0068911"}


id: FYPO:0000907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion inheritance is abolished, resulting in the formation of a daughter cell that lacks mitochondria.","definition_xrefs":["GO:0000001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrion inheritance during vegetative growth","termid":"FYPO:0000906"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitochondrion inheritance during vegetative growth","synonyms":[{"name":"abolished mitochondrion inheritance during mitotic cell cycle","type":"related"},{"name":"asymmetric mitochondrial inheritance during vegetative growth","type":"related"},{"name":"mitochondrion inheritance abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000907"}


id: MONDO:0013110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn vitamin metabolic disorder","termid":"MONDO:0005528"},{"relation_name":"is_a","term_name":"disorder of folate metabolism and transport","termid":"MONDO:0017313"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"neurodegenerative syndrome due to cerebral folate transport deficiency","secondary_identifiers":["OMIM:613068","MEDGEN:442763","MESH:C567791","ICD9:266.2","DOID:0050719","icd11.foundation:1158040363","GARD:10594","Orphanet:217382","SCTID:711403001","UMLS:C2751584"],"synonyms":[{"name":"cerebral folate deficiency syndrome","type":"related"},{"name":"cerebral folate receptor alpha deficiency","type":"exact"},{"name":"cerebral folate transport deficiency","type":"related"},{"name":"neurodegeneration due to cerebral folate TRANSPORT deficiency","type":"related"},{"name":"neurodegenerative syndrome due to cerebral folate transport deficiency","type":"exact"}],"termid":"MONDO:0013110","xrefs":{"Monarch":{"xref_id":"0013110"}}}


id: GO:0052426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism effects a change in the structure or function of its symbiont organism, mediated by a substance secreted by a type IV secretion system in the organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of symbiont morphology or physiology via substance secreted by type IV secretion system (obsolete GO:0052426)","synonyms":[{"name":"modification by organism of symbiont morphology or physiology via substance secreted by type IV secretion system","type":"exact"}],"termid":"GO:0052426"}


id: GO:2000519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 1 cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell activation","termid":"GO:2000517"},{"relation_name":"positively_regulates","term_name":"T-helper 1 cell activation","termid":"GO:0035711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T-helper 1 cell activation","synonyms":[{"name":"positive regulation of Th1 cell activation","type":"exact"}],"termid":"GO:2000519"}


id: PBO:0071872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 10","termid":"PBO:0071872"}


id: GO:0003689
data:
  {"annotated_genes":["SJAG_00863","SJAG_02182","SJAG_01010","SJAG_02563","SJAG_02373","SJAG_00806","SJAG_00272","SJAG_00729","SJAG_02610","SJAG_04150"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69175,71468,72942,76769,77507,78034,92054,96647,113050,113140],"is_not":false,"summary":null,"term":"GO:0003689"}]},"cv_name":"molecular_function","definition":"Facilitating the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex, driven by ATP hydrolysis.","definition_xrefs":["GOC:vw","PMID:16082778","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00806":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_02373":null,"SJAG_02563":null,"SJAG_02610":null,"SJAG_04150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"DNA clamp loader activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-176264","Reactome:R-HSA-174439","GO:0033170"],"synonyms":[{"name":"DNA clamp loading ATPase activity","type":"exact"},{"name":"DNA-protein loading ATPase activity","type":"related"},{"name":"PCNA loading activity","type":"narrow"},{"name":"PCNA loading complex activity","type":"narrow"},{"name":"protein-DNA loading ATPase activity","type":"related"}],"termid":"GO:0003689","terms_by_termid":{"GO:0003689":null}}


id: MONDO:0012726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by the association of hematuria (without proteinuria) with extrarenal manifestations: retinal arterial tortuosities responsible for retinal hemorrhages, cardiac arrhythmia, Raynaud phenomena and congenital muscular contractures.","definition_xrefs":["Orphanet:73229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cardiovascular disorder","termid":"MONDO:0004995"},{"relation_name":"is_a","term_name":"COL4A1-related disorder","termid":"MONDO:0800461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant familial hematuria-retinal arteriolar tortuosity-contractures syndrome","secondary_identifiers":["OMIM:611773","MEDGEN:382033","SCTID:702428000","MESH:C567088","UMLS:C2673195","ICD9:758.89","GARD:10889"],"synonyms":[{"name":"HANAC","type":"exact"},{"name":"HANAC syndrome","type":"exact"},{"name":"angiopathy, hereditary, with nephropathy, aneurysms, and muscle cramps","type":"exact"},{"name":"hereditary angiopathy with nephropathy, aneurysms, and muscle cramps syndrome","type":"related"},{"name":"hereditary angiopathy-nephropathy-aneurysms-muscle cramps syndrome","type":"exact"}],"termid":"MONDO:0012726","xrefs":{"Monarch":{"xref_id":"0012726"}}}


id: MONDO:0012659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any age-related macular degeneration in which the cause of the disease is a mutation in the C3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 9","secondary_identifiers":["MESH:C566958","DOID:0110021","OMIM:611378","UMLS:C1969651","MEDGEN:370717"],"synonyms":[{"name":"ARMD9","type":"exact"},{"name":"C3 age-related macular degeneration","type":"exact"},{"name":"age related macular degeneration type 9","type":"exact"},{"name":"age-related macular degeneration caused by mutation in C3","type":"exact"},{"name":"macular Degeneration, age-related, type 9","type":"exact"},{"name":"macular degeneration, age-related, 9","type":"related"}],"termid":"MONDO:0012659","xrefs":{"Monarch":{"xref_id":"0012659"}}}


id: GO:0008506
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75918],"is_not":false,"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sucrose(out) + H+(out) = sucrose(in) + H+(in).","definition_xrefs":["TC:2.A.1.5.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"sucrose:monoatomic cation symporter activity","termid":"GO:0009669"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sucrose:proton symporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:TRANS-RXN-244","RHEA:72187"],"synonyms":[{"name":"hydrogen/sucrose transporter activity","type":"broad"},{"name":"sucrose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0008506","terms_by_termid":{"GO:0008506":null}}


id: MONDO:1012317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal and skeletal dysplasia, non-human animal","termid":"MONDO:1011984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal and skeletal dysplasia, dog","secondary_identifiers":["OMIA:001182-9615"],"termid":"MONDO:1012317","xrefs":{"Monarch":{"xref_id":"1012317"}}}


id: PBO:0062428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 89 pseudogene","termid":"PBO:0062428"}


id: PBO:0045594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 5 (pseudogene)","termid":"PBO:0045594"}


id: MONDO:0002621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma arising from the soft tissue.","definition_xrefs":["NCIT:C8810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteosarcoma","termid":"MONDO:0009807"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"extraosseous osteosarcoma","secondary_identifiers":["SCTID:404077005","DOID:3357","UMLS:C0855052","ICD9:170.9","MEDGEN:163186"],"synonyms":[{"name":"extraosseous osteosarcoma","type":"exact"},{"name":"extraskeletal osteogenic sarcoma","type":"exact"},{"name":"extraskeletal osteosarcoma","type":"exact"},{"name":"osteosarcoma, extraskeletal, malignant","type":"exact"},{"name":"soft tissue osteosarcoma","type":"exact"}],"termid":"MONDO:0002621","xrefs":{"Monarch":{"xref_id":"0002621"}}}


id: PATO:0001146
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001146 resistance value (obsolete PATO:0001146)","termid":"PATO:0001146"}


id: PBO:0056012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056012"}


id: MONDO:0005829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute tick-borne arbovirus infection causing meningoencephalomyelitis of sheep.","definition_xrefs":["MESH:D008146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"louping ill","secondary_identifiers":["DOID:10250","ICD9:063.1"],"synonyms":[{"name":"Louping ill","type":"exact"}],"termid":"MONDO:0005829","xrefs":{"Monarch":{"xref_id":"0005829"}}}


id: PBO:0076310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptojanin 2","termid":"PBO:0076310"}


id: PBO:0059566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1I, pseudogene","termid":"PBO:0059566"}


id: SO:0002363
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for mitochondrial rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"mt_gene","termid":"SO:0000088"},{"relation_name":"is_a","term_name":"rRNA_gene","termid":"SO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_rRNA_gene","synonyms":[{"name":"mitochondrial rRNA gene","type":"exact"}],"termid":"SO:0002363"}


id: GO:0043408
data:
  {"annotated_genes":["SJAG_00318","SJAG_02183","SJAG_03969","SJAG_00781","SJAG_00975","SJAG_03893","SJAG_01587","SJAG_00845","SJAG_02392","SJAG_03263","SJAG_01787","SJAG_03828","SJAG_00610","SJAG_03453","SJAG_02486","SJAG_02878","SJAG_00027","SJAG_05000","SJAG_06622","SJAG_01885","SJAG_01978","SJAG_01114","SJAG_04825","SJAG_02000","SJAG_06592","SJAG_04666","SJAG_02135","SJAG_03903","SJAG_06621","SJAG_02013","SJAG_04522","SJAG_01199","SJAG_00424","SJAG_03705","SJAG_02233","SJAG_03185","SJAG_02945"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74962,80731],"is_not":false,"summary":null,"term":"GO:0043408"},{"annotations":[99763,118617,96184,104116,107361,107920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[88548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043409"},{"annotations":[95372,92003,96304,118618,99765,117379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[107450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[88426,89779,92759,91108,103157,118209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[112130,109251,118584,109254,109248,109249,109252,112788,95593,109250,109253,117672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[115890,91189,114929,88485,104018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction mediated by the MAP kinase (MAPK) cascade.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00318":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_00975":null,"SJAG_01114":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_01787":null,"SJAG_01885":null,"SJAG_01978":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02233":null,"SJAG_02392":null,"SJAG_02486":null,"SJAG_02878":null,"SJAG_02945":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03453":null,"SJAG_03705":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03903":null,"SJAG_03969":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of MAPK cascade","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of MAP kinase cascade","type":"exact"},{"name":"regulation of MAP kinase kinase kinase cascade","type":"exact"},{"name":"regulation of MAPKKK cascade","type":"exact"},{"name":"regulation of mitogen activated protein kinase cascade","type":"exact"},{"name":"regulation of mitogen activated protein kinase kinase kinase cascade","type":"exact"},{"name":"regulation of mitogen-activated protein kinase cascade","type":"exact"},{"name":"regulation of mitogen-activated protein kinase kinase kinase cascade","type":"exact"}],"termid":"GO:0043408","terms_by_termid":{"GO:0043408":null,"GO:0043409":null,"GO:0062038":null,"GO:0180040":null,"GO:1900745":null,"GO:1903138":null,"GO:1903139":null,"GO:1903753":null}}


id: PBO:0038521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily F member 3","termid":"PBO:0038521"}


id: PBO:0051196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-14 (pseudogene)","termid":"PBO:0051196"}


id: PBO:0064562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 and ZP3 fusion","termid":"PBO:0064562"}


id: MONDO:0009902
data:
  {"annotated_genes":["SJAG_05283"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85814],"is_not":false,"summary":null,"term":"MONDO:0009902"}]},"cv_name":"mondo","definition":"Congenital erythropoietic porphyria, or Günther disease, is a form of erythropoietic porphyria characterized by very severe and mutilating photodermatosis.","definition_xrefs":["Orphanet:79277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"inherited porphyria","termid":"MONDO:0019142"},{"relation_name":"is_a","term_name":"anemia due to erythrocyte enzyme disorder","termid":"MONDO:0020585"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0019142"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0019142","MONDO:0005093","MONDO:0005066","MONDO:0002280"],"is_obsolete":false,"name":"cutaneous porphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:67312003","OMIM:263700","NORD:1599","DOID:13271","NANDO:1200817","UMLS:C5886774","MEDGEN:1861084","NANDO:2201268","MESH:D017092","GARD:4446","NCIT:C84697"],"synonyms":[{"name":"CEP","type":"exact"},{"name":"Cep","type":"related"},{"name":"Congenital Erythropoietic Porphyria","type":"exact"},{"name":"Gunther disease","type":"related"},{"name":"Günther disease","type":"exact"},{"name":"Uros deficiency","type":"related"},{"name":"congenital erythropoietic porphyria","type":"related"},{"name":"congenital porphyria","type":"related"},{"name":"cutaneous porphyria","type":"exact"},{"name":"erythropoietic porphyria","type":"exact"},{"name":"porphyria, congenital erythropoietic","type":"related"},{"name":"uroporphyrinogen 3 synthase deficiency","type":"related"},{"name":"uroporphyrinogen III synthase, deficiency of","type":"related"}],"termid":"MONDO:0009902","terms_by_termid":{"MONDO:0009902":null},"xrefs":{"Monarch":{"xref_id":"0009902"}}}


id: MONDO:0043294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of localized scleroderma characterized by a long strip of indurated skin, which is typically found unilaterally on an arm or leg, and sometimes on the forehead or trunk. This disorder often affects the tissues beneath the skin, causing damage to bones, muscle or other organs. It can limit movement, alter growth, and disfigure the affected area.","definition_xrefs":["NCIT:C116780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized scleroderma","termid":"MONDO:0019562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"linear scleroderma","secondary_identifiers":["UMLS:C0263409","SCTID:22784002","MEDGEN:75518","GARD:9513"],"synonyms":[{"name":"Scleroderma, linear","type":"related"},{"name":"en coup de saber","type":"related"},{"name":"en coup de sabre","type":"related"},{"name":"linear Scleroderma","type":"exact"},{"name":"linear morphea","type":"related"},{"name":"linear scleroderma","type":"exact"}],"termid":"MONDO:0043294","xrefs":{"Monarch":{"xref_id":"0043294"}}}


id: PBO:0057703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1290","termid":"PBO:0057703"}


id: MONDO:0005171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Chronic form of myeloproliferative neoplasm.","definition_xrefs":["MONDO:patterns/chronic"],"gene_count":0,"genotype_count":0,"name":"obsolete chronic myeloproliferative disorder (obsolete MONDO:0005171)","termid":"MONDO:0005171","xrefs":{"Monarch":{"xref_id":"0005171"}}}


id: PBO:0084875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; MRP21 exhibits genetic interactions with mutations in the COX2 and COX3 mRNA 5'-untranslated leader sequences","termid":"PBO:0084875"}


id: GO:0047798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + cyclomaltodextrin = linear maltodextrin.","definition_xrefs":["EC:3.2.1.54","MetaCyc:CYCLOMALTODEXTRINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"cyclomaltodextrinase activity","secondary_identifiers":["RHEA:23980"],"synonyms":[{"name":"cyclodextrinase activity","type":"related"},{"name":"cycloheptaglucanase activity","type":"related"},{"name":"cyclohexaglucanase activity","type":"related"},{"name":"cyclomaltodextrin dextrin-hydrolase (decyclizing)","type":"related"}],"termid":"GO:0047798"}


id: PBO:0042787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 152","termid":"PBO:0042787"}


id: GO:0060165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process controlling the timing and/or rate at which a relatively unspecialized cell in the subpallium acquires features of a neuron. The subpallium is the base region of the telencephalon.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of timing of neuron differentiation","termid":"GO:0060164"},{"relation_name":"part_of","term_name":"subpallium development","termid":"GO:0021544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of subpallium neuron differentiation","termid":"GO:0060165"}


id: PBO:0079442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taurine up-regulated 1","termid":"PBO:0079442"}


id: MOD:00030
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an N-formyl-L-methionine, a natural pretranslational modification.","definition_xrefs":["PubMed:2165784","OMSSA:22","PubMed:11152118","PubMed:10825024","ChEBI:33718","PubMed:3042771","PubMed:8758896","RESID:AA0021#FMET","Unimod:107#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"natural, non-standard encoded residue","termid":"MOD:00868"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formyl-L-methionine residue","synonyms":[{"name":"(2S)-2-formylamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-formamido-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-formylamino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-formylazanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"Addition of N-formyl met","type":"related"},{"name":"FormylMet","type":"related"},{"name":"MOD_RES N-formylmethionine","type":"exact"},{"name":"N-formyl-L-methionine","type":"exact"},{"name":"N-formylated L-methionine","type":"exact"},{"name":"fMet","type":"exact"},{"name":"nformylmet","type":"exact"}],"termid":"MOD:00030"}


id: PATO:0001182
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001182 relative response (obsolete PATO:0001182)","termid":"PATO:0001182"}


id: PBO:0078703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (CAA) 5-1","termid":"PBO:0078703"}


id: GO:0034289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a maltose stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to maltose","termid":"GO:0034286"},{"relation_name":"is_a","term_name":"detection of disaccharide stimulus","termid":"GO:0034288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of maltose stimulus","synonyms":[{"name":"perception of maltose stimulus","type":"related"}],"termid":"GO:0034289"}


id: PBO:0113522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Upstream serine/threonine kinase for the SNF1 complex; plays a role in pseudohyphal growth; partially redundant with Elm1p and Tos3p; members of this family have functional orthology with LKB1, a mammalian kinase associated with Peutz-Jeghers cancer-susceptibility syndrome; SAK1 has a paralog, TOS3, that arose from the whole genome duplication","termid":"PBO:0113522"}


id: MONDO:0024813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm originating from the apical lung. Most superior sulcus neoplasms are bronchogenic carcinomas. This tumor may be associated with Pancoast syndrome. It is also known as Pancoast tumor.","definition_xrefs":["NCIT:C27710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung neoplasm","termid":"MONDO:0021117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary sulcus neoplasm","secondary_identifiers":["MEDGEN:277550","UMLS:C1335574"],"synonyms":[{"name":"pulmonary sulcus neoplasm","type":"exact"},{"name":"pulmonary sulcus tumor","type":"exact"},{"name":"pulmonary sulcus tumour","type":"exact"}],"termid":"MONDO:0024813","xrefs":{"Monarch":{"xref_id":"0024813"}}}


id: MONDO:1010846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease in cats due to a mutation in the GLB1 gene. There is a buildup of GM1 gangliosides in tissues due to a lack of the enzyme beta-galactosidase. It is characterised by progressive neuromuscular dysfunction and impaired growth from an early age.","definition_xrefs":["OMIA:000402-9685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, domestic cat","termid":"MONDO:1010841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM1 gangliosidosis, GLB1-related, domestic cat","synonyms":[{"name":"gangliosidosis GM1, domestic cat","type":"related"}],"termid":"MONDO:1010846","xrefs":{"Monarch":{"xref_id":"1010846"}}}


id: SO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exon whereby at least one base is part of a codon (here, 'codon' is inclusive of the stop_codon).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_exon","synonyms":[{"name":"coding exon","type":"exact"}],"termid":"SO:0000195"}


id: PBO:0042383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD274 molecule","termid":"PBO:0042383"}


id: PBO:0067449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 571, pseudogene","termid":"PBO:0067449"}


id: PBO:0079014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-SeC (anticodon TCA) 2-1","termid":"PBO:0079014"}


id: PR:Q9UST5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrn7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UST5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor rrn7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.09c","synonyms":[{"name":"Spom972h-rrn7","type":"exact"}],"termid":"PR:Q9UST5"}


id: GO:1990271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with anti-Mullerian hormone to initiate a change in cell activity.","definition_xrefs":["GOC:hjd","PMID:23624077"],"gene_count":0,"genotype_count":0,"name":"obsolete anti-Mullerian hormone (obsolete GO:1990271)","synonyms":[{"name":"anti-Mullerian hormone","type":"exact"}],"termid":"GO:1990271"}


id: PBO:0068897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 139, pseudogene","termid":"PBO:0068897"}


id: PBO:0068406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 225","termid":"PBO:0068406"}


id: PBO:0061311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPHP3-ACAD11 readthrough (NMD candidate)","termid":"PBO:0061311"}


id: MONDO:0002861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma that arises from the testis. The majority of cases arise from teratomas or spermatocytic seminomas.","definition_xrefs":["NCIT:C6359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testis sarcoma","secondary_identifiers":["UMLS:C1336727","MEDGEN:234943","DOID:4062"],"synonyms":[{"name":"sarcoma of testis","type":"exact"},{"name":"sarcoma of the testis","type":"exact"},{"name":"testicular sarcoma","type":"exact"},{"name":"testis sarcoma","type":"exact"}],"termid":"MONDO:0002861","xrefs":{"Monarch":{"xref_id":"0002861"}}}


id: PBO:0000710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn2","termid":"PBO:0000710"}


id: MONDO:0009306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"combined immunodeficiency with skin granulomas","secondary_identifiers":["DOID:0112253","OMIM:233650","UMLS:C2673536","MEDGEN:435945","MESH:C567115","Orphanet:157949","GARD:13587"],"synonyms":[{"name":"CCHIDG","type":"related"},{"name":"CID due to RAG 1/2 deficiency","type":"exact"},{"name":"combined cellular and humoral immune defects with granulomas","type":"related"},{"name":"combined immunodeficiency due to RAG 1/2 deficiency","type":"exact"}],"termid":"MONDO:0009306","xrefs":{"Monarch":{"xref_id":"0009306"}}}


id: MONDO:0013551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the AP4B1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 47","secondary_identifiers":["OMIM:614066","DOID:0110799","MEDGEN:481368","UMLS:C3279738","NCIT:C164224","GARD:15749","NORD:1993"],"synonyms":[{"name":"AP4B1 hereditary spastic paraplegia","type":"exact"},{"name":"CPSQ5","type":"exact"},{"name":"SPG47","type":"exact"},{"name":"Spastic Paraplegia 47","type":"exact"},{"name":"autosomal recessive spastic paraplegia 47","type":"exact"},{"name":"cerebral palsy, spastic quadriplegic, 5","type":"related"},{"name":"cerebral palsy, spastic quadriplegic, 5, formerly","type":"related"},{"name":"hereditary spastic paraplegia 47","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in AP4B1","type":"exact"},{"name":"hereditary spastic paraplegia type 47","type":"exact"},{"name":"spastic paraplegia 47, autosomal recessive","type":"related"},{"name":"spastic quadriplegic cerebral palsy 5","type":"exact"}],"termid":"MONDO:0013551","xrefs":{"Monarch":{"xref_id":"0013551"}}}


id: PBO:0050580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 4","termid":"PBO:0050580"}


id: PBO:0075054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-17","termid":"PBO:0075054"}


id: GO:0050860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell receptor signaling pathway","termid":"GO:0050856"},{"relation_name":"is_a","term_name":"negative regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050858"},{"relation_name":"negatively_regulates","term_name":"T cell receptor signaling pathway","termid":"GO:0050852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of T cell receptor signaling pathway","synonyms":[{"name":"down regulation of T cell receptor signaling pathway","type":"exact"},{"name":"down-regulation of T cell receptor signaling pathway","type":"exact"},{"name":"downregulation of T cell receptor signaling pathway","type":"exact"},{"name":"inhibition of T cell receptor signaling pathway","type":"narrow"},{"name":"negative regulation of T cell receptor signalling pathway","type":"exact"},{"name":"negative regulation of T lymphocyte receptor signaling pathway","type":"exact"},{"name":"negative regulation of T lymphocyte receptor signalling pathway","type":"exact"},{"name":"negative regulation of T-cell receptor signaling pathway","type":"exact"},{"name":"negative regulation of T-lymphocyte receptor signaling pathway","type":"exact"},{"name":"negative regulation of T-lymphocyte receptor signalling pathway","type":"exact"},{"name":"negative regulation of TCR signaling pathway","type":"exact"}],"termid":"GO:0050860"}


id: PBO:0084306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron transporter, mediates Fe2+ transport across inner mito membrane; mitochondrial carrier family member; active under low-iron conditions; may transport other cations; MRS3 has a paralog, MRS4, that arose from the whole genome duplication","termid":"PBO:0084306"}


id: _global:has_component_process
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"w 'has process component' p if p and w are processes,  w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component","termid":"_global:has_component"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component_process","secondary_identifiers":["RO:0002018"],"termid":"_global:has_component_process"}


id: MONDO:0016033
data:
  {"annotated_genes":["SJAG_05019","SJAG_02701","SJAG_01831","SJAG_01067","SJAG_00796"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007387"},{"annotations":[87381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010370"},{"annotations":[86039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012555"},{"annotations":[86497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013864"},{"annotations":[86604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957921"}]},"cv_name":"mondo","definition":"A rare syndrome characterized by low birth weight, delayed growth, intellectual disabillity, behavioral problems, and a distinctive facial appearance (thin, arched eyebrows, low set ears, small teeth, and small nose). The majority of cases are caused by mutations in the NIPBL gene. Less severe forms of the syndrome are caused by mutations in the SMC1A and SMC3 genes.","definition_xrefs":["PMID:20301283"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic diaphragmatic or abdominal wall malformation (obsolete MONDO:0015216)","termid":"MONDO:0015216"},{"relation_name":"excluded_subClassOf","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare disorder with ptosis (obsolete MONDO:0020169)","termid":"MONDO:0020169"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with a symptomatic strabismus (obsolete MONDO:0020253)","termid":"MONDO:0020253"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00796":null,"SJAG_01067":null,"SJAG_01831":null,"SJAG_02701":null,"SJAG_05019":null},"genotype_count":0,"is_obsolete":false,"name":"Cornelia de Lange syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:122470","icd11.foundation:1801560012","NANDO:2200958","DOID:11725","NCIT:C75016","NANDO:1200960","MedDRA:10056354","MEDGEN:78752","Orphanet:199","UMLS:C0270972","NORD:1009","GARD:10109"],"synonyms":[{"name":"Brachmann de Lange syndrome","type":"exact"},{"name":"Brachmann-de Lange syndrome","type":"exact"},{"name":"CDLS","type":"related"},{"name":"Cornelia de Lange syndrome","type":"exact"},{"name":"De Lange syndrome","type":"exact"}],"termid":"MONDO:0016033","terms_by_termid":{"MONDO:0007387":null,"MONDO:0010370":null,"MONDO:0012555":null,"MONDO:0013864":null,"MONDO:0957921":null},"xrefs":{"Monarch":{"xref_id":"0016033"}}}


id: FYPO:0004176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to a pheromone that occurs when the cell is subject to nitrogen starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah","PMID:8668157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during nitrogen starvation","termid":"FYPO:0001152"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to pheromone","termid":"FYPO:0003426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to pheromone and nitrogen starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to pheromone and nitrogen starvation","type":"related"},{"name":"decreased transcript level during cellular response to pheromone and nitrogen starvation","type":"exact"},{"name":"reduced RNA level during cellular response to pheromone and nitrogen starvation","type":"exact"}],"termid":"FYPO:0004176"}


id: GO:0036455
data:
  {"annotated_genes":["SJAG_03701"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118161],"is_not":false,"summary":null,"term":"GO:0036455"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a iron-sulfur cluster from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring sulphur-containing groups","termid":"GO:0016782"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03701":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"iron-sulfur transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2564828"],"synonyms":[{"name":"Fe-S transferase activity","type":"exact"}],"termid":"GO:0036455","terms_by_termid":{"GO:0036455":null}}


id: PBO:0072920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 1","termid":"PBO:0072920"}


id: PBO:0075562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine kinase 1","termid":"PBO:0075562"}


id: MOD:01332
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to 6x(13)C labeled L-leucine.","definition_xrefs":["Unimod:188#L","PubMed:12716131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-leucine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"}],"termid":"MOD:01332"}


id: GO:0160161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of propanediol catabolic process.","definition_xrefs":["PMID:7559322","PMID:9023178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alcohol catabolic process","termid":"GO:1900421"},{"relation_name":"positively_regulates","term_name":"propanediol catabolic process","termid":"GO:0051144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of propanediol catabolic process","termid":"GO:0160161"}


id: GO:0062090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of taurine biosynthesis.","definition_xrefs":["PMID:24911144","GOC:BHF","PMID:18648510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of taurine biosynthetic process","termid":"GO:0062089"},{"relation_name":"positively_regulates","term_name":"taurine biosynthetic process","termid":"GO:0042412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of taurine biosynthetic process","termid":"GO:0062090"}


id: PATO:0000814
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000814 taste acuity value (obsolete PATO:0000814)","termid":"PATO:0000814"}


id: PBO:0086361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ABC transporter","termid":"PBO:0086361"}


id: GO:1904609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosodium L-glutamate stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:21389115"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to monosodium L-glutamate (obsolete GO:1904609)","termid":"GO:1904609"}


id: PR:O13791
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein slt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.13","synonyms":[{"name":"Spom972h-slt1","type":"exact"}],"termid":"PR:O13791"}


id: MONDO:0023017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplication of the thumb unilateral biphalangeal","termid":"MONDO:0023017","xrefs":{"Monarch":{"xref_id":"0023017"}}}


id: FYPO:0000319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of spores and germinated spores most of which go on to divide once or twice. Some germinated spores remain septated and do not complete cell division.","definition_xrefs":["PomBase:mah","PomBase:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores and divided germinated spores (obsolete FYPO:0000319)","synonyms":[{"name":"put cut","type":"related"}],"termid":"FYPO:0000319"}


id: PBO:0047136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 172 member B, pseudogene","termid":"PBO:0047136"}


id: MONDO:0009998
data:
  {"annotated_genes":["SJAG_02879"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85563],"is_not":false,"summary":null,"term":"MONDO:0009998"}]},"cv_name":"mondo","definition":"Richieri Costa-Pereira syndrome is characterized by short stature, Robin sequence, cleft mandible, pre/postaxial hand anomalies (including hypoplastic thumbs), and clubfoot. It has been described in 14 Brazilian families and in one unrelated French patient. Prominent low set ears and a highly arched palate were also observed. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:3102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02879":null},"genotype_count":0,"is_obsolete":false,"name":"Richieri Costa-Pereira syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:723998001","MEDGEN:336581","MESH:C535677","OMIM:268305","UMLS:C1849348","GARD:4718","icd11.foundation:107084177"],"synonyms":[{"name":"ROBIN sequence with cleft mandible and limb anomalies","type":"related"},{"name":"Richieri Costa Pereira syndrome","type":"related"},{"name":"Richieri Costa-Pereira syndrome","type":"exact"},{"name":"Richieri-Costa and Pereira form of acrofacial dysostosis","type":"related"},{"name":"Richieri-Costa-Pereira syndrome","type":"related"},{"name":"short stature, Robin sequence, cleft mandible, pre/postaxial hand anomalies, and clubfoot","type":"related"},{"name":"short stature-Pierre Robin sequence-cleft mandible-hand anomalies clubfoot syndrome","type":"exact"},{"name":"short stature-Pierre Robin syndrome-cleft mandible-hand anomalies clubfoot syndrome","type":"exact"}],"termid":"MONDO:0009998","terms_by_termid":{"MONDO:0009998":null},"xrefs":{"Monarch":{"xref_id":"0009998"}}}


id: GO:0036237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an acyl-glucuronoside + H2O = an alcohol + D-glucuronate.","definition_xrefs":["PMID:22294686","GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"acyl-glucuronidase activity","synonyms":[{"name":"acyl-glucuronide deglucuronidation activity","type":"narrow"}],"termid":"GO:0036237"}


id: MONDO:0958235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ullrich congenital muscular dystrophy","termid":"MONDO:0000355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"Ullrich congenital muscular dystrophy 1B","secondary_identifiers":["DOID:0060942","MEDGEN:1859300","OMIM:620727","UMLS:C5935582"],"termid":"MONDO:0958235","xrefs":{"Monarch":{"xref_id":"0958235"}}}


id: GO:0050768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neurogenesis, the generation of cells within the nervous system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of neurogenesis","termid":"GO:0050767"},{"relation_name":"is_a","term_name":"negative regulation of nervous system development","termid":"GO:0051961"},{"relation_name":"negatively_regulates","term_name":"neurogenesis","termid":"GO:0022008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neurogenesis","synonyms":[{"name":"down regulation of neurogenesis","type":"exact"},{"name":"down-regulation of neurogenesis","type":"exact"},{"name":"downregulation of neurogenesis","type":"exact"},{"name":"inhibition of neurogenesis","type":"narrow"}],"termid":"GO:0050768"}


id: MONDO:0016607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Odontohypophosphatasia (odonto-HPP) is the least severe form of hypophosphatasia characterized by premature exfoliation of primary and/or permanent teeth and/or severe dental caries, in the absence of skeletal system abnormalities.","definition_xrefs":["Orphanet:247685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypophosphatasia","termid":"MONDO:0018570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0000426"],"is_obsolete":false,"name":"odontohypophosphatasia","secondary_identifiers":["NCIT:C131309","UMLS:C1840322","SCTID:708672004","GARD:17194","MESH:C564146","ICD10CM:E83.3","MEDGEN:326709"],"synonyms":[{"name":"HPPO","type":"exact"}],"termid":"MONDO:0016607","xrefs":{"Monarch":{"xref_id":"0016607"}}}


id: PBO:0017637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein Mpd1 (predicted)","termid":"PBO:0017637"}


id: PBO:0072793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 3","termid":"PBO:0072793"}


id: GO:0075188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont hyphopodium formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"hyphopodium formation","termid":"GO:0075187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hyphopodium formation","synonyms":[{"name":"regulation of hyphopodium formation on or near host","type":"exact"}],"termid":"GO:0075188"}


id: FYPO:0007240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell polarity phenotype in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) differs between the two daughter cells formed as a result of cell division. Normally, growth begins at the old end and then becomes bipolar with similar timing in both daughter cells.","definition_xrefs":["PomBase:mah","PMID:31719163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal NETO","termid":"FYPO:0000147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005568","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal NETO in daughter cells","synonyms":[{"name":"abnormal NETO in daughter cells during mitotic cell cycle","type":"related"},{"name":"abnormal NETO in daughter cells during vegetative growth","type":"exact"},{"name":"abnormal activation of bipolar cell growth in daughter cells","type":"related"},{"name":"abnormal cell growth mode switching, monopolar to bipolar, in daughter cells","type":"exact"},{"name":"abnormal new end take-off in daughter cells","type":"exact"},{"name":"abnormal switch from monopolar to bipolar cell growth in daughter cells","type":"exact"}],"termid":"FYPO:0007240"}


id: MONDO:0010643
data:
  {"annotated_genes":["SJAG_05979","SJAG_01349","SJAG_01013","SJAG_03453","SJAG_01748","SJAG_03905"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87559,87711,87712,87556,87557,87558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"}]},"cv_name":"mondo","definition":"A clonal (malignant) hematopoietic disorder with an acute onset, affecting the bone marrow and the peripheral blood. The malignant cells show minimal differentiation and are called blasts, either myeloid blasts (myeloblasts) or lymphoid blasts (lymphoblasts).","definition_xrefs":["NCIT:C9300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acute leukemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C564112","NCIT:C9298","ICD9:208.00","ICD9:208.0","DOID:12603","EFO:1000068","MEDGEN:43225","ICDO:9801/3","SCTID:91855006","UMLS:C0085669","HP:0002488"],"synonyms":[{"name":"acute leukaemia (disease)","type":"exact"},{"name":"acute leukemia","type":"exact"},{"name":"acute leukemia (disease)","type":"exact"},{"name":"leukemia, acute, X-linked","type":"related"},{"name":"stem cell leukaemia","type":"related"},{"name":"stem cell leukaemia (disease)","type":"related"},{"name":"stem cell leukemia","type":"related"},{"name":"stem cell leukemia (disease)","type":"related"}],"termid":"MONDO:0010643","terms_by_termid":{"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0010643"}}}


id: PBO:0000829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ryh1","termid":"PBO:0000829"}


id: GO:0046002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of progression through the preblastoderm mitotic cell cycle.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of preblastoderm mitotic cell cycle","termid":"GO:0007347"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle, embryonic","termid":"GO:0045977"},{"relation_name":"positively_regulates","term_name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of preblastoderm mitotic cell cycle","synonyms":[{"name":"activation of progression through preblastoderm mitotic cell cycle","type":"narrow"},{"name":"positive regulation of preblastoderm mitotic cell cycle progression","type":"exact"},{"name":"positive regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"stimulation of progression through preblastoderm mitotic cell cycle","type":"narrow"},{"name":"up regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"up-regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"upregulation of progression through preblastoderm mitotic cell cycle","type":"exact"}],"termid":"GO:0046002"}


id: PBO:0088343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphatidic acid transfer protein Ups1","termid":"PBO:0088343"}


id: PBO:0090966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GAP Gyp10","termid":"PBO:0090966"}


id: PBO:0002982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase class-III, unknown specificity","termid":"PBO:0002982"}


id: PR:Q92359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein C6G9.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.14","synonyms":[{"name":"Spom972h-puf4","type":"exact"}],"termid":"PR:Q92359"}


id: PBO:0047539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 5","termid":"PBO:0047539"}


id: GO:0032882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving chitin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"chitin metabolic process","termid":"GO:0006030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of chitin metabolic process","synonyms":[{"name":"regulation of chitin metabolism","type":"exact"}],"termid":"GO:0032882"}


id: PBO:0030281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_equatorial_microtubule_organizing_center","termid":"PBO:0030281"}


id: MONDO:0002863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rhabdomyosarcoma composed of embryonic and alveolar components. It is characterized by the presence of spindle cells with myoblastic differentiation, a myxoid stroma, and fibrous septa. These tumors were previously considered variants of alveolar rhabdomyosarcoma. The lack of PAX3-FOXO1 fusions in most of these tumors suggests that are biologically and clinically related to embryonal rhabdomyosarcoma.","definition_xrefs":["NCIT:C4259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rhabdomyosarcoma with mixed embryonal and alveolar features","secondary_identifiers":["ICDO:8902/3","MEDGEN:313444","DOID:4065","UMLS:C1709053"],"synonyms":[{"name":"mixed alveolar rhabdomyosarcoma","type":"exact"},{"name":"mixed embryonal rhabdomyosarcoma and alveolar rhabdomyosarcoma","type":"exact"},{"name":"mixed type alveolar rhabdomyosarcoma","type":"exact"},{"name":"mixed type rhabdomyosarcoma","type":"exact"},{"name":"rhabdomyosarcoma with mixed embryonal and alveolar features","type":"exact"}],"termid":"MONDO:0002863","xrefs":{"Monarch":{"xref_id":"0002863"}}}


id: GO:0010403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pectic arabinogalactan I, an alpha-(1,4)-linked D-galactopyranose backbone that is substituted with alpha-l-Araf residues via the O-3 of the D-galactose residues. Arabinogalactan I can be found as a side chain of rhamnogalacturonan I.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan I side chain metabolic process","termid":"GO:0010400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"pectic arabinogalactan I metabolic process","synonyms":[{"name":"pectic arabinogalactan I metabolism","type":"exact"}],"termid":"GO:0010403"}


id: PR:P26306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint control protein RAD9B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.07c","secondary_identifiers":["UniProtKB:P26306"],"synonyms":[{"name":"Spom972h-RAD9B","type":"exact"}],"termid":"PR:P26306"}


id: PBO:0071216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 57","termid":"PBO:0071216"}


id: GO:0030492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hemoglobin binding","synonyms":[{"name":"globin binding","type":"broad"},{"name":"haemoglobin binding","type":"exact"}],"termid":"GO:0030492"}


id: PBO:0063628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 4","termid":"PBO:0063628"}


id: PBO:0043396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X9-C motif containing 4","termid":"PBO:0043396"}


id: GO:0018656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene + O2 + NADH + H+ = H2O + NAD+ + phenanthrene-3,4-oxide.","definition_xrefs":["UM-BBD_reactionID:r0508","PMID:1599252"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene 3,4-monooxygenase activity (obsolete GO:0018656)","termid":"GO:0018656"}


id: GO:0036082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when extracellular phenylacetaldehyde has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:19135896","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"extracellular phenylacetaldehyde-gated monoatomic ion channel activity","synonyms":[{"name":"extracellular phenylacetaldehyde-gated ion channel activity","type":"broad"},{"name":"ionotropic phenylacetaldehyde receptor activity","type":"related"}],"termid":"GO:0036082"}


id: GO:0010453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell fate commitment","termid":"GO:0010453"}


id: PBO:0082534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; expressed under anaerobic conditions and required for anaerobic growth; transcription is also induced by cold shock; member of the Srp1p/Tip1p family of serine-alanine-rich proteins","termid":"PBO:0082534"}


id: GO:0090392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sepal giant cell. A sepal giant cell is a pavement cell that is part of the sepal epidermis and stretches one fifth the length of the sepal with a chromosome content of 16C.","definition_xrefs":["PMID:20485493","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal giant cell differentiation","termid":"GO:0090392"}


id: PBO:0047657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 9","termid":"PBO:0047657"}


id: PBO:0081961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida binding protein","termid":"PBO:0081961"}


id: MONDO:0005620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cerebral hemorrhage with amyloidosis (HCHWA) describes a group of rare familial central nervous system disorders characterized by amyloid deposition in the cerebral blood vessels leading to hemorrhagic and non-hemorrhagic strokes, focal neurological deficits, and progressive cognitive decline eventually leading to dementia.","definition_xrefs":["Orphanet:85458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"},{"relation_name":"is_a","term_name":"hereditary amyloidosis","termid":"MONDO:0018634"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"cerebral amyloid angiopathy","secondary_identifiers":["EFO:0006790","SCTID:230724001","GARD:10266","MESH:D016657","ICD10EXP:E85.4+","ICD10CM:I68.0","ICD9:277.39","NCIT:C84625","ICD10EXP:I68.0*","UMLS:C1510489","DOID:9246","MEDGEN:267610"],"synonyms":[{"name":"CAA, familial","type":"related"},{"name":"HCHWA","type":"exact"},{"name":"cerebral amyloid angiopathy, familial","type":"related"},{"name":"cerebral amyloid angiopathy, genetic","type":"related"},{"name":"dutch hereditary cerebral amyloid angiopathy","type":"exact"},{"name":"hereditary cerebral haemorrhage with amyloidosis - Dutch type","type":"exact"},{"name":"hereditary cerebral hemorrhage with amyloidosis - Dutch type","type":"exact"}],"termid":"MONDO:0005620","xrefs":{"Monarch":{"xref_id":"0005620"}}}


id: FYPO:0002462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, septated, and elongated.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"branched, elongated, septated cell","termid":"FYPO:0004594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"inviable branched, elongated vegetative cell","secondary_identifiers":["FYPO:0002461"],"synonyms":[{"name":"inviable branched cell during vegetative growth","type":"exact"},{"name":"inviable branched vegetative cell","type":"exact"},{"name":"inviable branched vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated cell during vegetative growth","type":"exact"},{"name":"inviable branched, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated, septated cell","type":"exact"},{"name":"inviable branched, long, septated cell","type":"exact"},{"name":"inviable branched, septated cell","type":"exact"},{"name":"inviable elongated branched cell","type":"exact"},{"name":"lethal; branched, elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002462"}


id: PBO:0011451
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no annotated human ortholog, is pseudogene in human, activity present in mice","termid":"PBO:0011451"}


id: GO:0004029
data:
  {"annotated_genes":["SJAG_00482","SJAG_03786","SJAG_02961"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76434,78956],"is_not":false,"summary":null,"term":"GO:0004029"},{"annotations":[101186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140087"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + H2O + NAD+ = a carboxylate + 2 H+ + NADH.","definition_xrefs":["RHEA:16185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00482":null,"SJAG_02961":null,"SJAG_03786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aldehyde dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ALDHDEHYDROG-RXN","Reactome:R-HSA-5692261","UM-BBD_reactionID:r0023","Reactome:R-HSA-71723","Reactome:R-HSA-380608","Reactome:R-HSA-6808487","Reactome:R-HSA-6813749","UM-BBD_reactionID:r0605","Reactome:R-HSA-6808496","UM-BBD_reactionID:r0003","EC:1.2.1.3","Reactome:R-HSA-5696091","Reactome:R-HSA-71691","Reactome:R-HSA-389609","Wikipedia:Aldehyde_dehydrogenase_(NAD+)"],"synonyms":[{"name":"CoA-independent aldehyde dehydrogenase activity","type":"related"},{"name":"NAD-aldehyde dehydrogenase activity","type":"related"},{"name":"NAD-dependent 4-hydroxynonenal dehydrogenase activity","type":"related"},{"name":"NAD-dependent aldehyde dehydrogenase activity","type":"related"},{"name":"NAD-linked aldehyde dehydrogenase activity","type":"related"},{"name":"aldehyde dehydrogenase (NAD+)","type":"related"},{"name":"aldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"m-methylbenzaldehyde dehydrogenase activity","type":"related"},{"name":"propionaldehyde dehydrogenase activity","type":"related"}],"termid":"GO:0004029","terms_by_termid":{"GO:0004029":null,"GO:0140087":null}}


