# terms

id: MONDO:0859196
data:
  {"annotated_genes":["SJAG_01809"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86587],"is_not":false,"summary":null,"term":"MONDO:0859196"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01809":null},"genotype_count":0,"is_obsolete":false,"name":"Usmani-Riazuddin syndrome, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794204","OMIM:619548","UMLS:C5561994"],"termid":"MONDO:0859196","terms_by_termid":{"MONDO:0859196":null},"xrefs":{"Monarch":{"xref_id":"0859196"}}}


id: GO:0034536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-8-methylchromene-2-carboxylate = 2-hydroxy-3-methylbenzalpyruvate.","definition_xrefs":["UM-BBD_reactionID:r0782"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-8-methylchromene-2-carboxylate isomerase activity (obsolete GO:0034536)","termid":"GO:0034536"}


id: PBO:0000553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin","termid":"PBO:0000553"}


id: PBO:0054297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1688","termid":"PBO:0054297"}


id: MONDO:0016968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy/tetrasomy of chromosome 18","termid":"MONDO:0016936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial trisomy of the long arm of chromosome 18","secondary_identifiers":["Orphanet:262977","MEDGEN:167200","UMLS:C0809935","GARD:20888","MESH:C538308"],"synonyms":[{"name":"18q duplication","type":"related"},{"name":"18q partial trisomy","type":"related"},{"name":"18q trisomy","type":"related"},{"name":"Duplication 18q","type":"related"},{"name":"chromosome 18q duplication","type":"related"},{"name":"partial duplication of chromosome 18q","type":"exact"},{"name":"partial duplication of the long arm of chromosome 18","type":"exact"},{"name":"partial trisomy of chromosome 18q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome type 18","type":"exact"},{"name":"trisomy 18q","type":"related"}],"termid":"MONDO:0016968","xrefs":{"Monarch":{"xref_id":"0016968"}}}


id: FYPO:0003915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in the mitochondrion is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"altered level of substance in mitochondrion","termid":"FYPO:0004957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitochondrial protein level","synonyms":[{"name":"decreased level of mitochondrial proteins","type":"exact"},{"name":"decreased mitochondrial protein level during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial protein level during vegetative growth","type":"exact"},{"name":"decreased protein level in mitochondrion during vegetative growth","type":"exact"},{"name":"reduced mitochondrial protein level","type":"exact"}],"termid":"FYPO:0003915"}


id: PBO:0041583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 open reading frame 39","termid":"PBO:0041583"}


id: MONDO:0044705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the mucosal epithelial surface of the ethmoid, frontal, maxillary, or sphenoid sinus. Patients may present with nasal fullness, obstruction, and/or epistaxis.","definition_xrefs":["NCIT:C8193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus carcinoma","termid":"MONDO:0000380"},{"relation_name":"is_a","term_name":"bone squamous cell carcinoma","termid":"MONDO:0000514"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paranasal sinus squamous cell carcinoma","secondary_identifiers":["Orphanet:500464","MEDGEN:79105","UMLS:C0280334","GARD:17927"],"synonyms":[{"name":"epidermoid carcinoma of paranasal sinus","type":"exact"},{"name":"epidermoid carcinoma of the paranasal sinus","type":"exact"},{"name":"paranasal sinus epidermoid carcinoma","type":"exact"},{"name":"paranasal sinus squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of paranasal sinus","type":"exact"},{"name":"squamous cell carcinoma of the nasal cavity and paranasal sinuses","type":"related"},{"name":"squamous cell carcinoma of the nasal cavity and sinuses","type":"exact"},{"name":"squamous cell carcinoma of the paranasal sinus","type":"exact"}],"termid":"MONDO:0044705","xrefs":{"Monarch":{"xref_id":"0044705"}}}


id: PBO:0050772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIV-1 Tat specific factor 1 pseudogene 2","termid":"PBO:0050772"}


id: GO:0035832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving berbamunine, an isoquinoline alkaloid.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzyl isoquinoline alkaloid metabolic process","termid":"GO:0046445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"berbamunine metabolic process","synonyms":[{"name":"berbamunine metabolism","type":"exact"}],"termid":"GO:0035832"}


id: PBO:0057513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 631","termid":"PBO:0057513"}


id: PBO:0108930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 15, mitochondrial 12S rRNA N4-cytidine","termid":"PBO:0108930"}


id: PBO:0063754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 19","termid":"PBO:0063754"}


id: GO:0042431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving indole (2,3-benzopyrrole), the basis of many biologically active substances (e.g. serotonin, tryptophan).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole metabolic process","synonyms":[{"name":"indole metabolism","type":"exact"}],"termid":"GO:0042431"}


id: PBO:0043834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation specific factor 6","termid":"PBO:0043834"}


id: GO:0050552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (4S)-limonene + diphosphate.","definition_xrefs":["MetaCyc:4.2.3.16-RXN","EC:4.2.3.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(4S)-limonene synthase activity","secondary_identifiers":["RHEA:12869"],"synonyms":[{"name":"(-)-(4S)-limonene synthase activity","type":"exact"},{"name":"4S-(-)-limonene synthase activity","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [cyclizing, (-)-(4S)-limonene-forming]","type":"related"},{"name":"geranyldiphosphate diphosphate lyase (limonene forming)","type":"related"},{"name":"geranyldiphosphate diphosphate lyase [cyclizing, (4S)-limonene-forming]","type":"related"}],"termid":"GO:0050552"}


id: GO:1904062
data:
  {"annotated_genes":["SJAG_04551","SJAG_03631","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113669,91558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[102461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cation transmembrane transport.","definition_xrefs":["PMID:15304482","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transport","termid":"GO:0034765"},{"relation_name":"regulates","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of monoatomic cation transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cation transmembrane transport","type":"broad"}],"termid":"GO:1904062","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: MONDO:0003359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of leiomyosarcoma characterized by the presence of cellular pleomorphism, malignant cells with large nuclei, and a myxoid stroma.","definition_xrefs":["NCIT:C3701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"myxoid leiomyosarcoma","secondary_identifiers":["MEDGEN:104725","DOID:5268","ICDO:8896/3","UMLS:C0205816"],"synonyms":[{"name":"myxoid leiomyosarcoma","type":"exact"},{"name":"myxoid leiomyosarcoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003359","xrefs":{"Monarch":{"xref_id":"0003359"}}}


id: PBO:0065947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD9 checkpoint clamp component A","termid":"PBO:0065947"}


id: PBO:0075829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 4","termid":"PBO:0075829"}


id: SO:0100013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Hydrophobic regions are regions with a low affinity for water.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"hydrophobic_region_of_peptide","synonyms":[{"name":"hydropathic","type":"related"},{"name":"hydrophobic region of peptide","type":"related"},{"name":"hydrophobic_region","type":"exact"},{"name":"hydrophobicity","type":"related"}],"termid":"SO:0100013"}


id: PBO:0003506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination protein Saw1 (predicted)","termid":"PBO:0003506"}


id: PBO:0070654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 25","termid":"PBO:0070654"}


id: GO:0005338
data:
  {"annotated_genes":["SJAG_00339","SJAG_04697","SJAG_01177","SJAG_00434","SJAG_01960","SJAG_04162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[72145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"},{"annotations":[75349,76344,88710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[76345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[77956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[77957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a nucleotide-sugar from one side of a membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["PMID:15034926","GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00339":null,"SJAG_00434":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_04162":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nucleotide-sugar transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9792608","GO:0005339","Reactome:R-HSA-744231","Reactome:R-HSA-744230"],"termid":"GO:0005338","terms_by_termid":{"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null}}


id: MONDO:0008153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic bone disorder characterized clinically by progressive extraskeletal bone formation presenting in early life with cutaneous ossification, that progressively involves subcutaneous and then subsequently deep connective tissues, including muscle and fascia. POH overlaps with a number of related genetic disorders including Albright hereditary osteodystrophy, pseudohypoparathyroidism (see these terms), and primary osteoma cutis, that share the common features of superficial heterotopic ossification in association with inactivating mutations of GNAS gene (20q13.2-q13.3), coding for guanine nucleotide-binding proteins. POH can, however, be distinguished clinically by the deep and progressive nature of the heterotopic bone formation.","definition_xrefs":["Orphanet:2762"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with progressive ossification of skin, skeletal muscle, fascia, tendons and ligaments (obsolete MONDO:0018231)","termid":"MONDO:0018231"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"},{"relation_name":"is_a","term_name":"disorder of GNAS inactivation","termid":"MONDO:0800466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"progressive osseous heteroplasia","secondary_identifiers":["GARD:109","MEDGEN:137714","MedDRA:10048902","MESH:C562735","DOID:0111535","icd11.foundation:1107209347","OMIM:166350","SCTID:719271000","NORD:1618","UMLS:C0334041"],"synonyms":[{"name":"POH","type":"exact"},{"name":"ectopic ossification familial type","type":"related"},{"name":"ectopic ossification, familial","type":"related"},{"name":"familial ectopic ossification","type":"exact"},{"name":"osseous heteroplasia, progressive","type":"related"},{"name":"osteoma cutis","type":"related"},{"name":"poh","type":"exact"}],"termid":"MONDO:0008153","xrefs":{"Monarch":{"xref_id":"0008153"}}}


id: PATO:0002152
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards from the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splayed","termid":"PATO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splayed lateral","termid":"PATO:0002152"}


id: MONDO:0001426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurofibroma that arises from the posterior mediastinum. Excision is usually curative.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediastinal neural neoplasm","termid":"MONDO:0003098"},{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediastinum neurofibroma","secondary_identifiers":["NCIT:C6631","UMLS:C1334674","MEDGEN:277354","DOID:12064"],"synonyms":[{"name":"mediastinal neurofibroma","type":"exact"},{"name":"mediastinum neurofibroma","type":"exact"},{"name":"neurofibroma of mediastinum","type":"exact"},{"name":"neurofibroma of the mediastinum","type":"exact"}],"termid":"MONDO:0001426","xrefs":{"Monarch":{"xref_id":"0001426"}}}


id: PBO:0027616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_mitotic_spindle_following_normal_mitosis","termid":"PBO:0027616"}


id: GO:0043090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of amino acids into a cell or organelle.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"amino acid import","synonyms":[{"name":"amino acid uptake","type":"exact"}],"termid":"GO:0043090"}


id: MONDO:0100343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A phenotypic variant of Bartter syndrome presenting antenatally with maternal polyhydramnios, pre-term delivery and postnatally with polyuria, and nephrocalcinosis. Hypokalemic alkalosis, increased levels of plasma renin and aldosterone, low blood pressure and vascular resistance to angiotensin II are characteristically associated. Genotypically they comprise Type 1 and Type 2 Bartter syndrome.","definition_xrefs":["Orphanet:93604"],"gene_count":0,"genotype_count":0,"name":"obsolete antenatal Bartter syndrome (obsolete MONDO:0100343)","synonyms":[{"name":"Bartter syndrome, furosemide type","type":"exact"},{"name":"Bartter syndrome, furosemide-amiloride type","type":"exact"},{"name":"hyperprostaglandin E syndrome","type":"exact"}],"termid":"MONDO:0100343","xrefs":{"Monarch":{"xref_id":"0100343"}}}


id: GO:0060622
data:
  {"annotated_genes":["SJAG_04771","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87860,92762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of ascospore wall beta-glucan biosynthetic process, the chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of fungal-type cell wall beta-glucan biosynthetic process","termid":"GO:0090093"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ascospore wall beta-glucan biosynthetic process","termid":"GO:0034412"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0071554","GO:0044085","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of ascospore wall beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060622","terms_by_termid":{"GO:0140748":null}}


id: PBO:0042630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 5 pseudogene","termid":"PBO:0042630"}


id: GO:0004022
data:
  {"annotated_genes":["SJAG_00237","SJAG_03822","SJAG_03196","SJAG_01414","SJAG_01457","SJAG_01869","SJAG_00240","SJAG_03370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71522,78505],"is_not":false,"summary":null,"term":"GO:0004022"},{"annotations":[99056,114922,114921,99055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120542"},{"annotations":[92156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047018"},{"annotations":[73019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003939"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+.","definition_xrefs":["EC:1.1.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase [NAD(P)+] activity","termid":"GO:0018455"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00240":null,"SJAG_01414":null,"SJAG_01457":null,"SJAG_01869":null,"SJAG_03196":null,"SJAG_03370":null,"SJAG_03822":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alcohol dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2162078","Reactome:R-HSA-71707"],"synonyms":[{"name":"ADH","type":"related"},{"name":"NAD-dependent alcohol dehydrogenase","type":"related"},{"name":"NAD-specific aromatic alcohol dehydrogenase","type":"related"},{"name":"NADH-alcohol dehydrogenase","type":"related"},{"name":"NADH-aldehyde dehydrogenase","type":"related"},{"name":"alcohol dehydrogenase activity","type":"broad"},{"name":"alcohol:NAD+ oxidoreductase","type":"related"},{"name":"aldehyde dehydrogenase (NAD) activity","type":"narrow"},{"name":"aldo-keto reductase (NAD) activity","type":"exact"},{"name":"aliphatic alcohol dehydrogenase","type":"narrow"},{"name":"ethanol dehydrogenase","type":"narrow"},{"name":"primary alcohol dehydrogenase","type":"broad"},{"name":"yeast alcohol dehydrogenase","type":"narrow"}],"termid":"GO:0004022","terms_by_termid":{"GO:0003939":null,"GO:0004022":null,"GO:0047018":null,"GO:0120542":null}}


id: GO:0102439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',4',5'-O-trimethylmyricetin + S-adenosyl-L-methionine = 7,3',4',5'-O-tetramethylmyricetin + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"3',4',5'-trimethylmyricetin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13916"],"termid":"GO:0102439"}


id: FYPO:0004465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to camptothecin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to camptothecin","synonyms":[{"name":"normal protein phosphorylation during cellular response to CPT","type":"exact"},{"name":"normal protein phosphorylation during cellular response to camptothecin during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to camptothecin during vegetative growth","type":"exact"}],"termid":"FYPO:0004465"}


id: PBO:0028742
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_prophase","termid":"PBO:0028742"}


id: PBO:0072604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSL1D1 divergent transcript","termid":"PBO:0072604"}


id: MONDO:0001443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The formation of dense connective tissue in the tympanic membrane that does not necessarily cause or lead to loss of hearing.","definition_xrefs":["MESH:D063371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tympanic membrane disorder","termid":"MONDO:0003648"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tympanosclerosis","secondary_identifiers":["icd11.foundation:28175464","ICD9:385.00","SCTID:23606001","DOID:1214","ICD9:385.09","UMLS:C0395887","MEDGEN:473094","ICD10CM:H74.0"],"termid":"MONDO:0001443","xrefs":{"Monarch":{"xref_id":"0001443"}}}


id: PBO:0088658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl-(protein) hydrolase","termid":"PBO:0088658"}


id: MONDO:0968949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary palmoplantar keratoderma","termid":"MONDO:0019272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratoderma, epidermolytic","secondary_identifiers":["DOID:0080223","OMIMPS:144200","UMLS:C1721006","MEDGEN:354561"],"termid":"MONDO:0968949","xrefs":{"Monarch":{"xref_id":"0968949"}}}


id: MONDO:0024512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondyloarthropathy, susceptibility to","secondary_identifiers":["OMIMPS:106300"],"synonyms":[{"name":"SPDA","type":"exact"}],"termid":"MONDO:0024512","xrefs":{"Monarch":{"xref_id":"0024512"}}}


id: MOD:00399
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with iodoacetic acid, usually replacement of a reactive hydrogen with a methylcarboxy group.","definition_xrefs":["Unimod:6","DeltaMass:64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetic acid derivatized residue","synonyms":[{"name":"Carboxymethyl","type":"related"},{"name":"Carboxymethyl (on Cysteine)","type":"exact"},{"name":"Iodoacetic acid derivative","type":"related"}],"termid":"MOD:00399"}


id: GO:0006427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling histidine to histidyl-tRNA, catalyzed by histidyl-tRNA synthetase. The histidyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3''-OH group of a histidine-accetping tRNA.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"histidyl-tRNA aminoacylation","termid":"GO:0006427"}


id: GO:0003399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a cytoneme are shaped. A cytoneme is a long, thin and polarized actin-based cytoplasmic extension that projects from a cell.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection morphogenesis","termid":"GO:0120039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoneme morphogenesis","termid":"GO:0003399"}


id: MONDO:0011512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brooke-Spiegler syndrome (BSS) is an inherited predisposition syndrome presenting with skin appendage tumors, namely cylindromas, spiradenomas and trichoepitheliomas. A minority of patients can also get major and minor salivary glands neoplasms, usually membranous basal cell adenoma.","definition_xrefs":["Orphanet:79493"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Brooke-Spiegler syndrome","secondary_identifiers":["GARD:10179","MEDGEN:346703","NCIT:C205541","UMLS:C1857941","DOID:0050693","OMIM:605041","SCTID:703531009","ICD9:239.2"],"synonyms":[{"name":"BRSS","type":"related"},{"name":"Brooke-Spiegler syndrome","type":"exact"},{"name":"Bss","type":"related"},{"name":"CYLD cutaneous syndrome","type":"exact"},{"name":"Spiegler-Brooke syndrome","type":"related"}],"termid":"MONDO:0011512","xrefs":{"Monarch":{"xref_id":"0011512"}}}


id: MONDO:0014035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe intellectual disability-progressive spastic diplegia syndrome is a rare condition that has been described in a few people with severe intellectual disability. Other signs and symptoms include progressive microcephaly (very small head); ataxia (lack of coordination); spasticity ; and/or skin, hair and mild facial anomalies. It is caused by changes (mutations) in the CTNNB1 gene and it is inherited in an autosomal dominant fashion. Treatment is based on the signs and symptoms present in each person.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"},{"relation_name":"is_a","term_name":"CTNNB1-related neurodevelopmental disorder and/or vitreoretinopathy","termid":"MONDO:0100571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"severe intellectual disability-progressive spastic diplegia syndrome","secondary_identifiers":["UMLS:C3554449","GARD:3505","MEDGEN:767363","OMIM:615075","Orphanet:404473","DOID:0070049","ICD10CM:G11.4"],"synonyms":[{"name":"CTNNB1-related intellectual disability","type":"related"},{"name":"MRD19","type":"exact"},{"name":"autosomal dominant intellectual disability 19","type":"exact"},{"name":"autosomal dominant mental retardation 19","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 19","type":"related"},{"name":"intellectual disability, autosomal dominant 19","type":"related"},{"name":"intellectual disability, autosomal dominant type 19","type":"exact"},{"name":"mental retardation, autosomal dominant 19","type":"related"},{"name":"mental retardation, autosomal dominant type 19","type":"exact"},{"name":"neurodevelopmental disorder with spastic diplegia and visual defects","type":"exact"},{"name":"severe intellectual disability-progressive spastic diplegia syndrome","type":"exact"}],"termid":"MONDO:0014035","xrefs":{"Monarch":{"xref_id":"0014035"}}}


id: MONDO:1011871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive neuronopathy, non-human animal","secondary_identifiers":["OMIA:001282"],"termid":"MONDO:1011871","xrefs":{"Monarch":{"xref_id":"1011871"}}}


id: GO:0019118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phenanthrene dioxide + H2O = a dihydrodiolphenanthrene.","definition_xrefs":["GOC:mah","UM-BBD_reactionID:r0535","UM-BBD_reactionID:r0536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"phenanthrene-epoxide hydrolase activity","termid":"GO:0019118"}


id: GO:0002523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte within or between different tissues and organs of the body contributing to an inflammatory response.","definition_xrefs":["PMID:7507411","PMID:14680625","GOC:add","PMID:14708592","ISBN:0781735149","PMID:8600538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"part_of","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte migration involved in inflammatory response","synonyms":[{"name":"immune cell migration during inflammatory response","type":"related"},{"name":"immune cell trafficking during inflammatory response","type":"related"},{"name":"leucocyte migration during inflammatory response","type":"related"},{"name":"leucocyte trafficking during inflammatory response","type":"related"},{"name":"leukocyte migration during inflammatory response","type":"related"},{"name":"leukocyte trafficking during inflammatory response","type":"related"}],"termid":"GO:0002523"}


id: PBO:0083943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-glutamyl kinase; catalyzes the first step in proline biosynthesis; required for nitrogen starvation-induced ribophagy but not for nonselective autophagy; PRO1 has a paralog, YHR033W, that arose from the whole genome duplication","termid":"PBO:0083943"}


id: MONDO:0100101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any fetal akinesia deformation sequence in which the cause of the disease is a mutation in the MUSK gene.","definition_xrefs":["OMIM:208150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fetal akinesia deformation sequence","termid":"MONDO:0008824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal akinesia deformation sequence 1","secondary_identifiers":["UMLS:C1276035","Orphanet:994","DOID:0111377","MEDGEN:220903"],"synonyms":[{"name":"FADS1","type":"exact"},{"name":"Pena-Shokeir syndrome type 1","type":"exact"},{"name":"Pena-Shokeir syndrome, type 1","type":"exact"}],"termid":"MONDO:0100101","xrefs":{"Monarch":{"xref_id":"0100101"}}}


id: FYPO:0003833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell proceeds normally through a specific cell cycle phase. A cell cycle phase is any of the distinct periods or stages into which the cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GO:0022403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle","termid":"FYPO:0003832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell cycle phase","termid":"FYPO:0003833"}


id: GO:0015372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (glutamate or aspartate)(out) + Na+(out) = (glutamate or aspartate)(in) + Na+(in).","definition_xrefs":["TC:2.A.23.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate/aspartate:sodium symporter activity (obsolete GO:0015372)","synonyms":[{"name":"glutamate/aspartate:sodium symporter activity","type":"exact"}],"termid":"GO:0015372"}


id: GO:0070424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway (NLR) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","synonyms":[{"name":"regulation of NOD signaling pathway","type":"narrow"},{"name":"regulation of nucleotide-binding oligomerization domain containing signaling pathway","type":"narrow"},{"name":"regulation of nucleotide-binding oligomerization domain containing signalling pathway","type":"narrow"}],"termid":"GO:0070424"}


id: GO:2000847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of corticosteroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of corticosteroid hormone secretion","termid":"GO:2000846"},{"relation_name":"negatively_regulates","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of corticosteroid hormone secretion","synonyms":[{"name":"negative regulation of corticosteroid secretion","type":"related"}],"termid":"GO:2000847"}


id: PBO:0048916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member K","termid":"PBO:0048916"}


id: FYPO:0005886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more heat shock elements (HSEs) occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"increased transcription from HSE promoter","synonyms":[{"name":"expression of Hsf1 target genes increased","type":"related"},{"name":"increased transcription from HSE promoter during mitotic cell cycle","type":"related"},{"name":"increased transcription from HSE promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0005886"}


id: PBO:0051525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor like 1","termid":"PBO:0051525"}


id: PBO:0079850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-80 homolog, NALCN channel complex subunit","termid":"PBO:0079850"}


id: MONDO:0019058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurometabolic disease (obsolete MONDO:0019058)","secondary_identifiers":["Orphanet:68385"],"termid":"MONDO:0019058","xrefs":{"Monarch":{"xref_id":"0019058"}}}


id: GO:0006529
data:
  {"annotated_genes":["SJAG_02832","SJAG_04549"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57682],"is_not":false,"summary":null,"term":"GO:0006529"},{"annotations":[102478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine metabolic process","termid":"GO:0006528"},{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02832":null,"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"asparagine biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"asparagine anabolism","type":"exact"},{"name":"asparagine biosynthesis","type":"exact"},{"name":"asparagine formation","type":"exact"},{"name":"asparagine synthesis","type":"exact"}],"termid":"GO:0006529","terms_by_termid":{"GO:0006529":null,"GO:0070981":null}}


id: PBO:0062120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 48 pseudogene","termid":"PBO:0062120"}


id: PBO:0029890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_stress_granule_assembly","termid":"PBO:0029890"}


id: PBO:0089813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-H","termid":"PBO:0089813"}


id: GO:0008960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylglycerol + membrane-derived-oligosaccharide D-glucose = 1,2-diacyl-sn-glycerol + membrane-derived-oligosaccharide 6-(glycerophospho)-D-glucose.","definition_xrefs":["EC:2.7.8.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0016780","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphatidylglycerol-membrane-oligosaccharide glycerophosphotransferase activity","secondary_identifiers":["MetaCyc:PGLYCEROLTRANSI-RXN"],"synonyms":[{"name":"oligosaccharide glycerophosphotransferase activity","type":"related"},{"name":"phosphatidylglycerol:membrane-derived-oligosaccharide-D-glucose glycerophosphotransferase activity","type":"related"},{"name":"phosphoglycerol transferase I","type":"related"},{"name":"phosphoglycerol transferase activity","type":"related"}],"termid":"GO:0008960"}


id: SO:0001968
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant of a protein coding gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_transcript_variant","synonyms":[{"name":"Jannovar:coding_transcript_variant","type":"exact"},{"name":"coding transcript variant","type":"exact"}],"termid":"SO:0001968"}


id: MONDO:0011128
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87479,87478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032751"}]},"cv_name":"mondo","definition":"Sheldon-Hall syndrome (SHS) is a rare multiple congenital contracture syndrome characterized by contractures of the distal joints of the limbs, triangular face, downslanting palpebral fissures, small mouth, and high arched palate.","definition_xrefs":["Orphanet:1147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"Sheldon-hall syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16556","icd11.foundation:1206883656","MEDGEN:320374","UMLS:C1834523","DOID:0111599"],"synonyms":[{"name":"DA2B","type":"exact"},{"name":"Freeman Sheldon syndrome, variant","type":"related"},{"name":"Freeman Sheldon variant","type":"related"},{"name":"Freeman-Sheldon syndrome variant","type":"exact"},{"name":"Sheldon-Hall syndrome","type":"exact"},{"name":"arthrogryposis multiplex congenita distal type 2B","type":"related"},{"name":"arthrogryposis multiplex congenita distal type II with craniofacial abnormalities","type":"related"},{"name":"arthrogryposis multiplex congenita, distal, type 2B","type":"related"},{"name":"arthrogryposis multiplex congenita, distal, type II, with craniofacial abnormalities","type":"related"},{"name":"arthrogryposis, distal, type 2B","type":"exact"},{"name":"distal arthrogryposis type 2B","type":"exact"}],"termid":"MONDO:0011128","terms_by_termid":{"MONDO:0032751":null},"xrefs":{"Monarch":{"xref_id":"0011128"}}}


id: GO:1903516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single strand break repair.","definition_xrefs":["GO_REF:0000058","PMID:17395247","GOC:TermGenie","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA repair","termid":"GO:0006282"},{"relation_name":"regulates","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"regulation of single strand break repair","termid":"GO:1903516"}


id: PBO:0048081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 2","termid":"PBO:0048081"}


id: PBO:0064573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porcupine O-acyltransferase","termid":"PBO:0064573"}


id: MONDO:0030867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 7","secondary_identifiers":["GARD:18492","OMIM:619130","UMLS:C5436874","MEDGEN:1768257"],"synonyms":[{"name":"THC7","type":"exact"},{"name":"Thrombocytopenia, Autosomal Dominant, 7","type":"exact"},{"name":"thrombocytopenia 7","type":"exact"}],"termid":"MONDO:0030867","xrefs":{"Monarch":{"xref_id":"0030867"}}}


id: MONDO:0017695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to glycogen branching enzyme deficiency","termid":"MONDO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease due to glycogen branching enzyme deficiency, progressive hepatic form","secondary_identifiers":["GARD:17394","NANDO:2201159","Orphanet:308621","UMLS:C5679972","MEDGEN:1826169"],"synonyms":[{"name":"GBE deficiency, progressive hepatic form","type":"exact"},{"name":"GSD due to glycogen branching enzyme deficiency, progressive hepatic form","type":"exact"},{"name":"GSD type 4, progressive hepatic form","type":"exact"},{"name":"GSDIV, progressive hepatic form","type":"exact"},{"name":"glycogen storage disease type 4, progressive hepatic form","type":"exact"},{"name":"glycogen storage disease type IV, progressive hepatic form","type":"exact"},{"name":"glycogenosis due to glycogen branching enzyme deficiency, progressive hepatic form","type":"exact"},{"name":"glycogenosis type 4, progressive hepatic form","type":"exact"},{"name":"glycogenosis type IV, progressive hepatic form","type":"exact"}],"termid":"MONDO:0017695","xrefs":{"Monarch":{"xref_id":"0017695"}}}


id: MONDO:0019116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Catecholamine-producing tumors may arise in the adrenal medulla (pheochromocytomas) or in extraadrenal chromaffin cells (secreting paragangliomas).","definition_xrefs":["Orphanet:717"],"gene_count":0,"genotype_count":0,"name":"obsolete catecholamine-producing tumor (obsolete MONDO:0019116)","termid":"MONDO:0019116","xrefs":{"Monarch":{"xref_id":"0019116"}}}


id: GO:0071252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sulfur dioxide (SO2) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sulfur dioxide","termid":"GO:0010477"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sulfur dioxide","termid":"GO:0071252"}


id: PBO:0084557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane anchor subunit of succinate dehydrogenase (SDH); involved in coupling the oxidation of succinate to the transfer of electrons to ubiquinone as part of the TCA cycle and the mitochondrial respiratory chain; has similarity to human SDH subunit D (SDHD), which is implicated in paraganglioma","termid":"PBO:0084557"}


id: PBO:0071899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 37","termid":"PBO:0071899"}


id: PBO:0001156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tyrosine","termid":"PBO:0001156"}


id: PBO:0062163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 4 pseudogene","termid":"PBO:0062163"}


id: PBO:0046408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial cell adhesion molecule","termid":"PBO:0046408"}


id: PATO:0000727
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000727 behavioral function value (obsolete PATO:0000727)","termid":"PATO:0000727"}


id: PBO:0081080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 11B","termid":"PBO:0081080"}


id: PBO:0066063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap guanine nucleotide exchange factor like 1","termid":"PBO:0066063"}


id: GO:0005528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 23-membered macrolide lactone FK506.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide binding","termid":"GO:0005527"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"FK506 binding","synonyms":[{"name":"FK506-sensitive peptidyl-prolyl cis-trans isomerase","type":"related"}],"termid":"GO:0005528"}


id: PR:O59682
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine palmitoyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03120","PANTHER:PTHR13693:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.02c","secondary_identifiers":["UniProtKB:O59682"],"synonyms":[{"name":"SPT 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPT1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPTLC1","type":"exact"},{"name":"long chain base biosynthesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59682"}


id: MONDO:0009743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurologic disease, infantile multisystem, with osseous fragility","secondary_identifiers":["MEDGEN:338057","OMIM:256720","MESH:C564954","UMLS:C1850465"],"synonyms":[{"name":"neurologic disease, infantile multisystem, with osseous fragility","type":"exact"}],"termid":"MONDO:0009743","xrefs":{"Monarch":{"xref_id":"0009743"}}}


id: FYPO:0004577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 in subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PMID:25398909","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H3-K9 trimethylation at subtelomere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 trimethylation at subtelomeric region during vegetative growth","type":"exact"},{"name":"decreased histone H3K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased subtelomeric histone H3K9 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004577"}


id: PBO:0082783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; involved in the recognition and initial import steps for all mitochondrially directed proteins; acts as a receptor for incoming precursor proteins; TOM70 has a paralog, TOM71, that arose from the whole genome duplication","termid":"PBO:0082783"}


id: PR:P34068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-factor precursor mfm1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:P34068","PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-factor precursor mfm1","termid":"PR:000025003"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.05","synonyms":[{"name":"Spom972h-mfm1","type":"exact"}],"termid":"PR:P34068"}


id: PBO:0046988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member M, pseudogene","termid":"PBO:0046988"}


id: GO:0045803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the organization, biogenesis or maintenance of the cytoskeleton.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytoskeleton (obsolete GO:0045803)","synonyms":[{"name":"positive regulation of cytoskeleton","type":"exact"}],"termid":"GO:0045803"}


id: GO:0003435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened that contributes to the progression of a growth plate cartilage chondrocyte over time.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete smoothened signaling pathway involved in growth plate cartilage chondrocyte development (obsolete GO:0003435)","synonyms":[{"name":"hedgehog signaling pathway involved in growth plate cartilage chondrocyte development","type":"exact"},{"name":"hh signaling pathway involved in growth plate cartilage chondrocyte development","type":"exact"},{"name":"smoothened signalling pathway involved in growth plate cartilage chondrocyte development","type":"exact"}],"termid":"GO:0003435"}


id: PBO:0067362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 461, pseudogene","termid":"PBO:0067362"}


id: PR:Q10236
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease H2 subunit A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00931","PANTHER:PTHR10954:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 subunit A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.02","secondary_identifiers":["UniProtKB:Q10236"],"synonyms":[{"name":"RNase H2 subunit A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNase HI large subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RNASEH2A","type":"exact"},{"name":"ribonuclease HI large subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ribonuclease HI subunit A (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10236"}


id: GO:0070404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the reduced form, NADH, of nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"NAD binding","termid":"GO:0051287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"NADH binding","synonyms":[{"name":"NAD (reduced) binding","type":"exact"},{"name":"reduced NAD binding","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide binding","type":"exact"}],"termid":"GO:0070404"}


id: PBO:0070553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 19","termid":"PBO:0070553"}


id: PBO:0071437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 43","termid":"PBO:0071437"}


id: PBO:0049001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphocholine phosphodiesterase 1","termid":"PBO:0049001"}


id: MONDO:0032771
data:
  {"annotated_genes":["SJAG_03163"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87518],"is_not":false,"summary":null,"term":"MONDO:0032771"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"paraganglioma","termid":"MONDO:0000448"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03163":null},"genotype_count":0,"is_obsolete":false,"name":"paragangliomas 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618475","UMLS:C5193116","GARD:16356","MEDGEN:1673088"],"synonyms":[{"name":"PARAGANGLIOMAS 7","type":"related"},{"name":"PGL7","type":"related"}],"termid":"MONDO:0032771","terms_by_termid":{"MONDO:0032771":null},"xrefs":{"Monarch":{"xref_id":"0032771"}}}


id: PBO:0076082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin","termid":"PBO:0076082"}


id: PBO:0045964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"egl-9 family hypoxia inducible factor 3","termid":"PBO:0045964"}


id: PBO:0089780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA ligase","termid":"PBO:0089780"}


id: GO:1904195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of granulosa cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:22383759","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"granulosa cell proliferation","termid":"GO:1990739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of granulosa cell proliferation","termid":"GO:1904195"}


id: MONDO:0009025
data:
  {"annotated_genes":["SJAG_01036"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85537],"is_not":false,"summary":null,"term":"MONDO:0009025"}]},"cv_name":"mondo","definition":"Apparent mineralocorticoid excess (AME) is a rare form of pseudohyperaldosteronism characterized by very early-onset and severe hypertension, associated with low renin levels and hypoaldosteronism.","definition_xrefs":["Orphanet:320"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"adrenal gland hyperfunction","termid":"MONDO:0006640"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic hypertension (obsolete MONDO:0015512)","termid":"MONDO:0015512"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"},{"relation_name":"is_a","term_name":"steroid inherited metabolic disorder","termid":"MONDO:0005523"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01036":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"apparent mineralocorticoid excess","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C131083","NANDO:2200362","MESH:D043204","SCTID:237770005","icd11.foundation:1737310323","NANDO:2100130","OMIM:218030","MEDGEN:90983","DOID:0090121","DOID:4367","GARD:433","SCTID:703256004","UMLS:C0342488","MESH:C537422","ICD9:255.3","NCIT:C123231"],"synonyms":[{"name":"11 Beta-hydroxysteroid dehydrogenase type 2 deficiency","type":"exact"},{"name":"11-beta-hydroxysteroid dehydrogenase deficiency type 2","type":"exact"},{"name":"AME","type":"related"},{"name":"AME 1","type":"related"},{"name":"APE","type":"exact"},{"name":"Ame1","type":"related"},{"name":"Ulick syndrome","type":"exact"},{"name":"apparent mineralocorticoid EXCESS","type":"related"},{"name":"apparent mineralocorticoid excess","type":"exact"},{"name":"apparent mineralocorticoid excess syndrome","type":"exact"},{"name":"cortisol 11-Beta-ketoreductase deficiency","type":"related"},{"name":"cortisol 11-beta-ketoreductase deficiency","type":"exact"},{"name":"syndrome of apparent mineralocorticoid Excess","type":"exact"}],"termid":"MONDO:0009025","terms_by_termid":{"MONDO:0009025":null},"xrefs":{"Monarch":{"xref_id":"0009025"}}}


id: MONDO:0008100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nipples inverted","secondary_identifiers":["UMLS:C0269269","OMIM:163600","MEDGEN:82844"],"synonyms":[{"name":"Mammillae Invertitae","type":"related"},{"name":"nipples inverted","type":"exact"}],"termid":"MONDO:0008100","xrefs":{"Monarch":{"xref_id":"0008100"}}}


id: MONDO:0007200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blepharonasofacial syndrome is a rare otorhinolaryngological malformation syndrome characterized by a distinctive mask-like facial dysmorphism, lacrimal duct obstruction, extrapyramidal features, digital malformations and intellectual disability.","definition_xrefs":["Orphanet:1252"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blepharonasofacial malformation syndrome","secondary_identifiers":["MEDGEN:163226","MESH:C536303","GARD:4238","OMIM:110050","SCTID:717913006","UMLS:C0796197"],"synonyms":[{"name":"Pashayan syndrome","type":"exact"},{"name":"Pashayan-Prozansky syndrome","type":"exact"},{"name":"blepharonasofacial malformation syndrome","type":"exact"}],"termid":"MONDO:0007200","xrefs":{"Monarch":{"xref_id":"0007200"}}}


id: PBO:0061252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 2 pseudogene 4","termid":"PBO:0061252"}


id: GO:0005213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of an egg chorion. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah","GOC:sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of egg chorion","synonyms":[{"name":"structural constituent of chorion","type":"broad"},{"name":"structural protein of chorion","type":"narrow"}],"termid":"GO:0005213"}


id: GO:0102623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + scutellarein 7-methyl ether = cirsimaritin + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:73243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"scutellarein 7-methyl ether 6-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15528"],"termid":"GO:0102623"}


id: GO:0008174
data:
  {"annotated_genes":["SJAG_02099","SJAG_04034","SJAG_05693","SJAG_00325"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90800,94269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062152"},{"annotations":[72525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004482"},{"annotations":[110067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001734"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an mRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00325":null,"SJAG_02099":null,"SJAG_04034":null,"SJAG_05693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"mRNA methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008174","terms_by_termid":{"GO:0001734":null,"GO:0004482":null,"GO:0062152":null}}


id: GO:0036280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-canavanine stimulus. L-canavanine is L-homoserine substituted at oxygen with a guanidino (carbamimidamido) group.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"response to L-canavanine","termid":"GO:1901354"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-canavanine","termid":"GO:0036280"}


id: GO:0005846
data:
  {"annotated_genes":["SJAG_04360","SJAG_01064","SJAG_01830"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70779,73714,115677],"is_not":false,"summary":null,"term":"GO:0005846"}]},"cv_name":"cellular_component","definition":"A conserved heterodimeric protein complex that binds to the 5' terminal cap structure m7G(5')ppp(5')N of nascent eukaryotic RNA polymerase II transcripts such as pre-mRNA and U snRNA. The consists of proteins known as CBP20 and CBP80, binds to cap structures in the nucleus, and is involved in pre-mRNA splicing, 3'-end formation, and RNA nuclear export.","definition_xrefs":["PMID:16043498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding complex","termid":"GO:0034518"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01064":null,"SJAG_01830":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear cap binding complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"CBC","type":"related"},{"name":"NCBP-NIP1 complex","type":"narrow"},{"name":"mRNA cap binding complex","type":"narrow"},{"name":"nuclear CBC","type":"exact"},{"name":"snRNA cap binding complex","type":"narrow"}],"termid":"GO:0005846","terms_by_termid":{"GO:0005846":null}}


id: PBO:0017586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, TPR lobe subcomplex subunit Cut9/Apc6","termid":"PBO:0017586"}


id: FYPO:0006259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the length of the mitotic spindle is normal (i.e. indistinguishable from wild type) during metaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic spindle morphology","termid":"FYPO:0007106"},{"relation_name":"part_of","term_name":"normal mitotic spindle","termid":"FYPO:0001399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic spindle length during metaphase","synonyms":[{"name":"normal mitotic spindle length during metaphase during vegetative growth","type":"exact"},{"name":"normal spindle length during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal spindle length during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006259"}


id: MONDO:0001809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesions of uterus","secondary_identifiers":["MEDGEN:537073","UMLS:C0241593","SCTID:361115000","DOID:13812","ICD9:621.5"],"synonyms":[{"name":"band of uterus","type":"exact"},{"name":"intrauterine synechiae","type":"related"}],"termid":"MONDO:0001809","xrefs":{"Monarch":{"xref_id":"0001809"}}}


id: MONDO:0003849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow-growing malignant bone tumor arising from the remnants of the notochord and occurring in the clivus. It is characterized by a lobulated growth pattern, myxoid stroma formation, and the presence of physaliphorous cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base chordoma","termid":"MONDO:0002892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"clivus chordoma","secondary_identifiers":["SCTID:446939001","DOID:6312","MEDGEN:232372","UMLS:C1333071","NCIT:C5412","ICD9:170.0"],"synonyms":[{"name":"chordoma (disease) of clivus of occipital bone","type":"exact"},{"name":"chordoma of clivus","type":"exact"},{"name":"chordoma of the clivus","type":"exact"},{"name":"clival chordoma","type":"exact"},{"name":"clivus of occipital bone chordoma (disease)","type":"exact"}],"termid":"MONDO:0003849","xrefs":{"Monarch":{"xref_id":"0003849"}}}


id: PBO:0083162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene PSK2/YOL045W","termid":"PBO:0083162"}


id: GO:1990160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex consisting of the helicase loading complex DnaB-DnaC, replication restart proteins Rep and PriC, and associated DNA. Involved in the restart of DNA replication after a stalled replication fork has been repaired.","definition_xrefs":["PMID:8663105","PMID:19941825","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-primosome complex","termid":"GO:1990099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"DnaB-DnaC-Rep-PriC complex","synonyms":[{"name":"DnaB-DnaC-Rep-PriC preprimosome","type":"exact"},{"name":"phi-X174-type preprimosome","type":"related"}],"termid":"GO:1990160"}


id: GO:0010347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-galactose-1-phosphate + H2O = L-galactose + phosphate.","definition_xrefs":["PMID:15550539","PMID:16595667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose-1-phosphate phosphatase activity","termid":"GO:0070456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"L-galactose-1-phosphate phosphatase activity","secondary_identifiers":["MetaCyc:RXNQT-4142","RHEA:26349"],"termid":"GO:0010347"}


id: MONDO:0017568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrodysplasia scoliosis is a rare, genetic dysostosis disorder characterized by brachydactyly and other finger/toe anomalies (short and/or wide metacarpals, abnormal or absent metatarsals, broad halluces), carpal synostosis, fused cervical vertebrae, scoliosis and spina bifida occulta. There have been no further descriptions in the literature since 1984.","definition_xrefs":["Orphanet:2956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Prata-Liberal-Goncalves syndrome","secondary_identifiers":["UMLS:C2931761","GARD:491","MEDGEN:419156"],"synonyms":[{"name":"acrodysplasia scoliosis","type":"exact"},{"name":"brachydactyly-scoliosis-carpal fusion syndrome","type":"exact"}],"termid":"MONDO:0017568","xrefs":{"Monarch":{"xref_id":"0017568"}}}


id: GO:1990665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric protein complex comprising two Annexin A2 (AnxA2) monomers and two copies of its binding partner, S100 protein p11 (S100A10).","definition_xrefs":["PMID:18799458","PMID:23483454","GOC:BHF","GOC:bf","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"AnxA2-p11 complex","synonyms":[{"name":"(A2.p11)2 complex","type":"exact"},{"name":"(p11)2.(AnxA2)2 complex","type":"exact"},{"name":"Annexin A2 tetramer","type":"related"},{"name":"Annexin A2-p11 complex","type":"exact"},{"name":"AnxA2.p11 complex","type":"exact"},{"name":"AnxA2:S100A10 heterotetramer","type":"exact"}],"termid":"GO:1990665"}


id: PBO:0088200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc metalloendopeptidase; found in the cytoplasm and intermembrane space of mitochondria; with Cym1p, involved in degradation of mitochondrial proteins and of presequence peptides cleaved from imported proteins; protein abundance increases in response to DNA replication stress","termid":"PBO:0088200"}


id: GO:1990739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of granulosa cells, resulting in the expansion of the granulosa cells population. A granulosa cell is a supporting cell for the developing female gamete in the ovary of mammals. They develop from the coelomic epithelial cells of the gonadal ridge.","definition_xrefs":["PMID:22383759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell proliferation","termid":"GO:1990739"}


id: MONDO:0957599
data:
  {"annotated_genes":["SJAG_02782","SJAG_03406","SJAG_05230","SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86721,86720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958196"},{"annotations":[87371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015005"},{"annotations":[85865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030005"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_05230":null},"genotype_count":0,"is_obsolete":false,"name":"epilepsy, early-onset","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:617290"],"termid":"MONDO:0957599","terms_by_termid":{"MONDO:0015005":null,"MONDO:0030005":null,"MONDO:0958196":null},"xrefs":{"Monarch":{"xref_id":"0957599"}}}


id: MONDO:0003540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute T cell leukemia (obsolete MONDO:0003540)","termid":"MONDO:0003540","xrefs":{"Monarch":{"xref_id":"0003540"}}}


id: PBO:0061371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 31","termid":"PBO:0061371"}


id: PBO:0028151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spliceosomal_complex_assembly","termid":"PBO:0028151"}


id: PBO:0041635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C intronic transcript 1","termid":"PBO:0041635"}


id: PBO:0039879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 36","termid":"PBO:0039879"}


id: MONDO:0006132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare low grade carcinoma that arises from the cervix. It is characterized by the presence of nests of basaloid cells with focal glandular formations.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin adenoid basal cell carcinoma","termid":"MONDO:0002951"},{"relation_name":"is_a","term_name":"cervical squamous cell carcinoma","termid":"MONDO:0006143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"cervical adenoid basal carcinoma","secondary_identifiers":["UMLS:C1516403","NCIT:C40213","GARD:20499","ICD10CM:C53.0","MEDGEN:275704","DOID:6428","Orphanet:213828","EFO:1000160","ONCOTREE:CABC"],"synonyms":[{"name":"adenoid basal carcinoma of the cervix uteri","type":"exact"},{"name":"cervical adenoid basal cancer","type":"exact"},{"name":"cervical adenoid basal carcinoma","type":"exact"},{"name":"skin adenoid basal cell carcinoma of uterine cervix","type":"exact"},{"name":"uterine cervix skin adenoid basal cell carcinoma","type":"exact"}],"termid":"MONDO:0006132","xrefs":{"Monarch":{"xref_id":"0006132"}}}


id: PBO:0079069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 3-3","termid":"PBO:0079069"}


id: PBO:0110288
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named after human ortholog CAPRIN-1","termid":"PBO:0110288"}


id: PBO:0071252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 93","termid":"PBO:0071252"}


id: MONDO:0009521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, acute myelocytic, with polyposis coli and colon cancer","secondary_identifiers":["OMIM:246470","MESH:C565441","UMLS:C1855505","MEDGEN:383699"],"synonyms":[{"name":"leukemia, acute myelocytic, with polyposis coli and colon cancer","type":"exact"}],"termid":"MONDO:0009521","xrefs":{"Monarch":{"xref_id":"0009521"}}}


id: MONDO:0019763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laryngo-tracheo-esophageal cleft (LC) type 3 is a congenital respiratory tract anomaly characterized by a cleft extending through the cricoid cartilage, sometimes into the cervical trachea, with severe swallowing disorders, lung infections and pulmonary damage.","definition_xrefs":["Orphanet:93940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft type 3","secondary_identifiers":["GARD:16833","UMLS:C0584825","MEDGEN:667241"],"synonyms":[{"name":"LTEC III","type":"exact"},{"name":"LTEC3","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft type 3","type":"exact"}],"termid":"MONDO:0019763","xrefs":{"Monarch":{"xref_id":"0019763"}}}


id: PBO:0000638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp7","termid":"PBO:0000638"}


id: PBO:0057057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 142","termid":"PBO:0057057"}


id: GO:2000175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pro-T cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"is_a","term_name":"negative regulation of lymphoid progenitor cell differentiation","termid":"GO:1905457"},{"relation_name":"is_a","term_name":"regulation of pro-T cell differentiation","termid":"GO:2000174"},{"relation_name":"negatively_regulates","term_name":"pro-T cell differentiation","termid":"GO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of pro-T cell differentiation","synonyms":[{"name":"negative regulation of pro-T lymphocyte differentiation","type":"exact"}],"termid":"GO:2000175"}


id: PBO:0054915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2329","termid":"PBO:0054915"}


id: GO:0040026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of development of the vulva. Vulval development is the process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.","definition_xrefs":["GOC:ems","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vulval development","termid":"GO:0040028"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"vulval development","termid":"GO:0040025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vulval development","synonyms":[{"name":"activation of vulval development","type":"related"},{"name":"stimulation of vulval development","type":"related"},{"name":"up regulation of vulval development","type":"related"},{"name":"up-regulation of vulval development","type":"related"},{"name":"upregulation of vulval development","type":"related"}],"termid":"GO:0040026"}


id: MONDO:0018397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete female infertility due to hypothalamic-pituitary-gonadal axis disorder (obsolete MONDO:0018397)","secondary_identifiers":["Orphanet:399831"],"synonyms":[{"name":"rare female infertility due to gonadotropic axis disorder","type":"exact"},{"name":"rare female infertility due to hypothalamic-pituitary-ovarian axis disorder","type":"exact"}],"termid":"MONDO:0018397","xrefs":{"Monarch":{"xref_id":"0018397"}}}


id: GO:0008630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced by the detection of DNA damage, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:go_curators","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage response","termid":"GO:0006974"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to DNA damage","synonyms":[{"name":"DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"}],"termid":"GO:0008630"}


id: PBO:0071007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 9","termid":"PBO:0071007"}


id: SO:0000583
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of a transcript that will be edited.","direct_ancestors":[{"relation_name":"is_a","term_name":"edited_transcript_feature","termid":"SO:0000579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre_edited_region","synonyms":[{"name":"pre edited region","type":"exact"},{"name":"pre-edited region","type":"exact"}],"termid":"SO:0000583"}


id: PR:Q09885
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC584.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.11c","synonyms":[{"name":"Spom972h-SPCC584.11c","type":"exact"}],"termid":"PR:Q09885"}


id: MONDO:0017861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ethylene glycol poisoning is a rare poisoning resulting in elevated anion gap metabolic acidosis, due to the production of glycolic acid, glyoxylic acid, and oxalic acid by alcohol dehydrogenase (ADH) in the liver when ethylene glycol is metabolized, characterized initially by euphoria, slurred speech, encephalopathy, coma and seizures, and followed by late manifestations such as tachycardia, arrhythmias, myocardial depression, hemodynamic imbalance and, finally, acute renal failure.","definition_xrefs":["Orphanet:31826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethylene glycol poisoning","secondary_identifiers":["GARD:18805","ICD9:982.8","SCTID:426692001"],"termid":"MONDO:0017861","xrefs":{"Monarch":{"xref_id":"0017861"}}}


id: GO:0008643
data:
  {"annotated_genes":["SJAG_02958","SJAG_03820","SJAG_03960","SJAG_03606","SJAG_04068","SJAG_04905","SJAG_02719","SJAG_00057","SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64974,58311,61019,61053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034219"},{"annotations":[114480,110954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046323"},{"annotations":[117511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[110955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[64902,103296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008645"},{"annotations":[96100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[96102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of carbohydrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carbohydrates are a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02719":null,"SJAG_02958":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"carbohydrate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0008644","GO:0006861"],"synonyms":[{"name":"sugar transport","type":"narrow"}],"termid":"GO:0008643","terms_by_termid":{"GO:0008645":null,"GO:0034219":null,"GO:0046323":null,"GO:0098708":null,"GO:0106081":null,"GO:0106082":null,"GO:0140425":null}}


id: MONDO:0031689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic progeroid syndrome (obsolete MONDO:0031689)","secondary_identifiers":["ICD10CM:E34.8","Orphanet:363245"],"termid":"MONDO:0031689","xrefs":{"Monarch":{"xref_id":"0031689"}}}


id: GO:2000844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of testosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"regulation of testosterone secretion","termid":"GO:2000843"},{"relation_name":"negatively_regulates","term_name":"testosterone secretion","termid":"GO:0035936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of testosterone secretion","termid":"GO:2000844"}


id: GO:0010943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H2O = NMNH + ADP.","definition_xrefs":["RHEA:60820","GOC:tb","PMID:12790796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide phosphatase activity","termid":"GO:0004551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NADPH pyrophosphatase activity","termid":"GO:0010943"}


id: MONDO:0021240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the tongue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tongue disorder","termid":"MONDO:0001165"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tongue neoplasm","secondary_identifiers":["EFO:0003871","MEDGEN:52778","UMLS:C0040411","NCIT:C3416","SCTID:126778001"],"synonyms":[{"name":"neoplasm of the tongue","type":"exact"},{"name":"neoplasm of tongue","type":"exact"},{"name":"tongue neoplasm (disease)","type":"exact"},{"name":"tongue tumor","type":"exact"},{"name":"tongue tumour","type":"exact"},{"name":"tumor of the tongue","type":"exact"},{"name":"tumor of tongue","type":"exact"},{"name":"tumour of the tongue","type":"exact"},{"name":"tumour of tongue","type":"exact"}],"termid":"MONDO:0021240","xrefs":{"Monarch":{"xref_id":"0021240"}}}


id: FYPO:0004424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of threonine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein threonine phosphorylation (obsolete FYPO:0004424)","synonyms":[{"name":"increased peptidyl-threonine phosphorylation","type":"exact"},{"name":"increased threonine phosphorylation","type":"exact"}],"termid":"FYPO:0004424"}


id: GO:0102306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-benzoin + NADP(3-) = benzil + NADPH(4-) + H+.","definition_xrefs":["GOC:pz","EC:1.1.1.320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzil reductase [(S)-benzoin-forming] activity","secondary_identifiers":["MetaCyc:RXN-12898","RHEA:25968"],"termid":"GO:0102306"}


id: PBO:0034173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_transport_to_from_or_in","termid":"PBO:0034173"}


id: PBO:0081817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 10, Y-linked","termid":"PBO:0081817"}


id: PBO:0015671
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kcat/Km 7.9x10^3 min-1 M-1","termid":"PBO:0015671"}


id: PBO:0080865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 6","termid":"PBO:0080865"}


id: GO:0051000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of the enzyme nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monooxygenase activity","termid":"GO:0032770"},{"relation_name":"is_a","term_name":"regulation of nitric-oxide synthase activity","termid":"GO:0050999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitric-oxide synthase activity","synonyms":[{"name":"NOS activator","type":"exact"},{"name":"activation of nitric-oxide synthase activity","type":"narrow"},{"name":"nitric-oxide synthase activator","type":"exact"},{"name":"positive regulation of NOS activity","type":"exact"},{"name":"stimulation of nitric-oxide synthase activity","type":"narrow"},{"name":"up regulation of nitric-oxide synthase activity","type":"exact"},{"name":"up-regulation of nitric-oxide synthase activity","type":"exact"},{"name":"upregulation of nitric-oxide synthase activity","type":"exact"}],"termid":"GO:0051000"}


id: MONDO:0011742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hirschsprung disease, susceptibility to","termid":"MONDO:0100179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease, susceptibility to, 7","secondary_identifiers":["UMLS:C1969836","OMIM:606875","MEDGEN:370761"],"synonyms":[{"name":"HSCR7","type":"exact"},{"name":"Hirschsprung disease, susceptibility to, 7","type":"exact"}],"termid":"MONDO:0011742","xrefs":{"Monarch":{"xref_id":"0011742"}}}


id: PBO:0060948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFIB antisense RNA 1","termid":"PBO:0060948"}


id: PBO:0028592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_heat","termid":"PBO:0028592"}


id: GO:0034554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,3',5-tribromobisphenol A + 2 H+ + 2 e- = 3,3'-dibromobisphenol A + HBr.","definition_xrefs":["UM-BBD_reactionID:r0842"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,3',5-tribromobisphenol A reductive dehalogenase activity (obsolete GO:0034554)","termid":"GO:0034554"}


id: PR:Q09869
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12075:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.05c","secondary_identifiers":["UniProtKB:Q09869"],"synonyms":[{"name":"SPAC12G12.05c","type":"related"},{"name":"Spom972h-TAF9","type":"exact"},{"name":"TBP-associated factor 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09869"}


id: PBO:0051044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 1-7","termid":"PBO:0051044"}


id: GO:0045205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of MAP kinase into, out of or within a cell, or between cells.","definition_xrefs":["GOC:ebc","ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK transporter activity (obsolete GO:0045205)","synonyms":[{"name":"MAPK transporter activity","type":"exact"}],"termid":"GO:0045205"}


id: MONDO:0022697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of cerebral palsy characterized by involuntary, purposeless writhing movements which affect the hands, feet, arms, and legs; the face and tongue may be affected as well, leading to involuntary grimacing, drooling, dysarthria and difficulty eating.","definition_xrefs":["NCIT:C97169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral palsy","termid":"MONDO:0006497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"athetoid cerebral palsy","secondary_identifiers":["UMLS:C0270742","SCTID:230780007","DOID:0050672","ICD10CM:G80.3","SCTID:75019001","MEDGEN:82853"],"synonyms":[{"name":"ADCP","type":"related"},{"name":"athetoid cerebral palsy","type":"exact"},{"name":"athetoid dyskinetic cerebral palsy","type":"exact"},{"name":"cerebral palsy dyskinetic","type":"related"},{"name":"dyskinetic cerebral palsy","type":"exact"}],"termid":"MONDO:0022697","xrefs":{"Monarch":{"xref_id":"0022697"}}}


id: GO:0098987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the modification of synaptic structure and as a result regulates synaptic transmission.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"is_a","term_name":"regulation of modification of synaptic structure","termid":"GO:1905244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of modification of synapse structure, modulating synaptic transmission","termid":"GO:0098987"}


id: PBO:0073405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 8","termid":"PBO:0073405"}


id: PBO:0076069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signaling receptor and transporter of retinol STRA6","termid":"PBO:0076069"}


id: PBO:0027352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_oxygen_consumption_during_stationary_phase","termid":"PBO:0027352"}


id: PBO:0036013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_acetylation_during_vegetative_growth","termid":"PBO:0036013"}


id: PBO:0031315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_valproic_acid","termid":"PBO:0031315"}


id: MONDO:0003936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive adenocarcinoma of the breast with a favorable prognosis. It is composed of tubular structures lined by a single layer of epithelium.","definition_xrefs":["NCIT:C9135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive ductal breast carcinoma","termid":"MONDO:0004953"},{"relation_name":"is_a","term_name":"tubular adenocarcinoma","termid":"MONDO:0005606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"invasive tubular breast carcinoma","secondary_identifiers":["UMLS:C1328544","DOID:6587","MEDGEN:230969"],"synonyms":[{"name":"breast tubular adenocarcinoma","type":"exact"},{"name":"infiltrating tubular breast carcinoma","type":"exact"},{"name":"infiltrating tubular carcinoma of breast","type":"exact"},{"name":"infiltrating tubular carcinoma of the breast","type":"exact"},{"name":"invasive tubular breast carcinoma","type":"exact"},{"name":"invasive tubular carcinoma of breast","type":"exact"},{"name":"invasive tubular carcinoma of the breast","type":"exact"},{"name":"tubular breast cancer","type":"exact"},{"name":"tubular breast carcinoma","type":"exact"},{"name":"tubular carcinoma of breast","type":"exact"},{"name":"tubular carcinoma of the breast","type":"exact"}],"termid":"MONDO:0003936","xrefs":{"Monarch":{"xref_id":"0003936"}}}


id: PBO:0052125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily E regulatory subunit 3","termid":"PBO:0052125"}


id: PBO:0085781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the mitochondrial outer surface; links the Arp2/3 complex with the mitochondria during anterograde mitochondrial movement; also binds to and promotes degradation of mRNAs for select nuclear-encoded mitochondrial proteins; translationally represses oxidative stress-linked genes; regulates CoQ biosynthesis","termid":"PBO:0085781"}


id: GO:0045892
data:
  {"annotated_genes":["SJAG_04584","SJAG_00987","SJAG_02981","SJAG_00441","SJAG_02730","SJAG_00861","SJAG_00290","SJAG_00792","SJAG_03473","SJAG_02104","SJAG_04921","SJAG_03067","SJAG_01157","SJAG_02255","SJAG_04381","SJAG_04512","SJAG_02858","SJAG_00163","SJAG_03845","SJAG_01707","SJAG_01680","SJAG_01000","SJAG_00410","SJAG_00266","SJAG_00969","SJAG_00996","SJAG_01199","SJAG_02846","SJAG_04026","SJAG_04613","SJAG_02752","SJAG_04249","SJAG_04312","SJAG_01311","SJAG_01230","SJAG_03319","SJAG_00802","SJAG_03143","SJAG_01799","SJAG_00926","SJAG_01728","SJAG_04268","SJAG_01804","SJAG_04607","SJAG_00124","SJAG_03081","SJAG_04539","SJAG_02385","SJAG_02444","SJAG_01254","SJAG_02898","SJAG_00142","SJAG_04039"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101390],"is_not":false,"summary":null,"term":"GO:0045892"},{"annotations":[108279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"},{"annotations":[114134,92501,75710,94224,114568,70477,70920,74435,99210,92477,94980,93739,112400,117671,73597,74205,106813,113280,96617,80791,72552,77114,77376,91596,79855,72256,102165,74010,106571,104572,108884,111032,95063,108281,101315,104271,106135,107064,94082,74661,109323,111454,107044,91524,94568,106229,93641,87933,103869,108542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000122"},{"annotations":[74062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"},{"annotations":[101316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010621"},{"annotations":[118237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.","definition_xrefs":["GOC:go_curators","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"is_a","term_name":"negative regulation of RNA biosynthetic process","termid":"GO:1902679"},{"relation_name":"negatively_regulates","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00142":null,"SJAG_00163":null,"SJAG_00266":null,"SJAG_00290":null,"SJAG_00410":null,"SJAG_00441":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00969":null,"SJAG_00987":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01157":null,"SJAG_01199":null,"SJAG_01230":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01680":null,"SJAG_01707":null,"SJAG_01728":null,"SJAG_01799":null,"SJAG_01804":null,"SJAG_02104":null,"SJAG_02255":null,"SJAG_02385":null,"SJAG_02444":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02846":null,"SJAG_02858":null,"SJAG_02898":null,"SJAG_02981":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03143":null,"SJAG_03319":null,"SJAG_03473":null,"SJAG_03845":null,"SJAG_04026":null,"SJAG_04039":null,"SJAG_04249":null,"SJAG_04268":null,"SJAG_04312":null,"SJAG_04381":null,"SJAG_04512":null,"SJAG_04539":null,"SJAG_04584":null,"SJAG_04607":null,"SJAG_04613":null,"SJAG_04921":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of DNA-templated transcription","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016481","GO:0032582","GO:0061021"],"synonyms":[{"name":"down regulation of gene-specific transcription","type":"related"},{"name":"down regulation of transcription, DNA-dependent","type":"exact"},{"name":"down-regulation of gene-specific transcription","type":"related"},{"name":"down-regulation of transcription, DNA-dependent","type":"exact"},{"name":"downregulation of gene-specific transcription","type":"related"},{"name":"downregulation of transcription, DNA-dependent","type":"exact"},{"name":"inhibition of gene-specific transcription","type":"related"},{"name":"inhibition of transcription, DNA-dependent","type":"narrow"},{"name":"negative regulation of cellular transcription, DNA-dependent","type":"exact"},{"name":"negative regulation of gene-specific transcription","type":"related"},{"name":"negative regulation of transcription, DNA-dependent","type":"exact"},{"name":"negative regulation of transcription, DNA-templated","type":"exact"},{"name":"transcription repressor activity","type":"related"}],"termid":"GO:0045892","terms_by_termid":{"GO:0000122":null,"GO:0010621":null,"GO:0016480":null,"GO:0034244":null,"GO:0045892":null,"GO:0060195":null}}


id: GO:0071753
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgM isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and in its circulating form complexed with J chain in polymeric forms. An IgM immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["GOC:add","PMID:20176268","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IgM immunoglobulin complex","termid":"GO:0071753"}


id: GO:0046383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTDP-rhamnose, a substance composed of rhamnose in glycosidic linkage with deoxyribosylthymine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dTDP-rhamnose metabolic process","synonyms":[{"name":"dTDP-rhamnose metabolism","type":"exact"}],"termid":"GO:0046383"}


id: PBO:0057310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 517a","termid":"PBO:0057310"}


id: MONDO:0024675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilms tumor of the kidney which occurs in adults.","definition_xrefs":["NCIT:C6180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney Wilms tumor","termid":"MONDO:0019004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"adult kidney Wilms tumor","secondary_identifiers":["UMLS:C1332219","MEDGEN:231045"],"synonyms":[{"name":"adenosarcoma of adult kidney","type":"exact"},{"name":"adenosarcoma of the adult kidney","type":"exact"},{"name":"adult kidney Wilms tumor","type":"exact"},{"name":"adult kidney adenosarcoma","type":"exact"},{"name":"adult nephroblastoma","type":"exact"},{"name":"adult renal Wilms tumor","type":"exact"},{"name":"adult renal Wilms tumour","type":"exact"},{"name":"adult renal Wilms' tumor","type":"exact"},{"name":"adult renal Wilms' tumour","type":"exact"},{"name":"adult renal adenosarcoma","type":"exact"},{"name":"kidney Wilms tumor of adults","type":"exact"},{"name":"kidney Wilms tumour of adults","type":"exact"}],"termid":"MONDO:0024675","xrefs":{"Monarch":{"xref_id":"0024675"}}}


id: PBO:0065638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 13","termid":"PBO:0065638"}


id: PBO:0075683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid receptor RNA activator 1","termid":"PBO:0075683"}


id: PATO:0002281
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cuscpidate quality inhering in a bearer by virtue of the bearer possessing two cusps.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicuspidate","termid":"PATO:0002257"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biscupidate","synonyms":[{"name":"bicuspid","type":"exact"}],"termid":"PATO:0002281"}


id: PBO:0061206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide binding oligomerization domain containing 1","termid":"PBO:0061206"}


id: PBO:0042727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein E","termid":"PBO:0042727"}


id: PBO:0064010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 44","termid":"PBO:0064010"}


id: PBO:0031779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_endocytosis_during_vegetative_growth","termid":"PBO:0031779"}


id: PBO:0068488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 72, pseudogene","termid":"PBO:0068488"}


id: PBO:0029711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_high_pH","termid":"PBO:0029711"}


id: PBO:0072466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 30","termid":"PBO:0072466"}


id: PBO:0075376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 13","termid":"PBO:0075376"}


id: MONDO:0030261
data:
  {"annotated_genes":["SJAG_01818"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86861],"is_not":false,"summary":null,"term":"MONDO:0030261"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, type 1F","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619304","GARD:16442","UMLS:C5543331","DOID:0112331","MEDGEN:1785905"],"synonyms":[{"name":"PCH1F","type":"exact"},{"name":"pontocerebellar hypoplasia, type 1F","type":"exact"}],"termid":"MONDO:0030261","terms_by_termid":{"MONDO:0030261":null},"xrefs":{"Monarch":{"xref_id":"0030261"}}}


id: SO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequences that decrease interactions between biological regions, such as between a promoter, its 5' context and/or the translational unit(s) it regulates. Spacers can affect regulation of translation, transcription, and other biological processes.","definition_xrefs":["PMID:27034378","PMID:24933158","PMID:20843779","PMID:28422998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inert_DNA_spacer","secondary_identifiers":["doi:10.1101/584664"],"synonyms":[{"name":"Inert DNA Spacer","type":"related"}],"termid":"SO:0002223"}


id: GO:0170066
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111482],"is_not":false,"summary":null,"term":"GO:0170066"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of polyamine biosynthesis. Polyamine biosynthesis is the chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups.","definition_xrefs":["PMID:9769097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of polyamine biosynthetic process","termid":"GO:0010967"},{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"negatively_regulates","term_name":"polyamine biosynthetic process","termid":"GO:0006596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of polyamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0170066","terms_by_termid":{"GO:0170066":null}}


id: PBO:0048514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP dissociation inhibitor 2 pseudogene 1","termid":"PBO:0048514"}


id: PBO:0027219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytosolic_monomeric_ribosome_level","termid":"PBO:0027219"}


id: PBO:0052111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily B member 1","termid":"PBO:0052111"}


id: PR:Q10990
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdt2 gene.","definition_xrefs":["UniProtKB:Q10990","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle protein cdt2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.19c","synonyms":[{"name":"Spom972h-cdt2","type":"exact"}],"termid":"PR:Q10990"}


id: GO:0090296
data:
  {"annotated_genes":["SJAG_03957"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090297"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the process in which new strands of DNA are synthesized in the mitochondrion.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA metabolic process","termid":"GO:1901858"},{"relation_name":"regulates","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of mitochondrial DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitochondrial DNA synthesis","type":"related"}],"termid":"GO:0090296","terms_by_termid":{"GO:0090297":null}}


id: MONDO:0006230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma of the stomach resembling squamous cell carcinomas arising elsewhere in the body.","definition_xrefs":["NCIT:C5475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastric squamous cell carcinoma","secondary_identifiers":["UMLS:C1333789","EFO:1000278","MEDGEN:234302","DOID:5516","GARD:21743","Orphanet:418959","SCTID:766980008"],"synonyms":[{"name":"gastric (stomach) squamous cell cancer","type":"exact"},{"name":"gastric squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of stomach","type":"exact"},{"name":"squamous cell carcinoma of the stomach","type":"exact"},{"name":"stomach squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0006230","xrefs":{"Monarch":{"xref_id":"0006230"}}}


id: SO:0001374
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carboxymethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carboxymethyluridine","secondary_identifiers":["RNAMOD:087"],"synonyms":[{"name":"5-carboxymethyluridine","type":"exact"},{"name":"cm5U","type":"exact"},{"name":"five carboxymethyluridine","type":"exact"}],"termid":"SO:0001374"}


id: GO:1902830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spinal cord association neuron differentiation.","definition_xrefs":["PMID:21730158","GOC:TermGenie","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of spinal cord association neuron differentiation","termid":"GO:1902829"},{"relation_name":"negatively_regulates","term_name":"spinal cord association neuron differentiation","termid":"GO:0021527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spinal cord association neuron differentiation","synonyms":[{"name":"down regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"downregulation of spinal cord association neuron differentiation","type":"exact"},{"name":"downregulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"inhibition of spinal cord association neuron differentiation","type":"narrow"},{"name":"inhibition of spinal cord dorsal interneuron differentiation","type":"narrow"},{"name":"negative regulation of spinal cord dorsal interneuron differentiation","type":"exact"}],"termid":"GO:1902830"}


id: GO:0045016
data:
  {"annotated_genes":["SJAG_01639","SJAG_02484"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77678],"is_not":false,"summary":null,"term":"GO:0045016"},{"annotations":[75838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"}]},"cv_name":"biological_process","definition":"The process in which a magnesium ion (Mg2+) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:11254124","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magnesium ion transmembrane transport","termid":"GO:1903830"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01639":null,"SJAG_02484":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"mitochondrial magnesium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:1990614"],"synonyms":[{"name":"mitochondrial magnesium ion transport","type":"related"}],"termid":"GO:0045016","terms_by_termid":{"GO:0045016":null,"GO:1990616":null}}


id: PBO:0066886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 186","termid":"PBO:0066886"}


id: MONDO:0006833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological enlargement of the lingual thyroid, ectopic thyroid tissue at the base of the tongue. It may cause upper airway obstruction; dysphagia; or hypothyroidism symptoms.","definition_xrefs":["MESH:D047268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"goiter","termid":"MONDO:0005397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lingual goiter","secondary_identifiers":["UMLS:C0271760","ICD9:759.2","DOID:13196","SCTID:75667007","MEDGEN:75766"],"termid":"MONDO:0006833","xrefs":{"Monarch":{"xref_id":"0006833"}}}


id: GO:0060421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organ growth","termid":"GO:0046622"},{"relation_name":"is_a","term_name":"regulation of heart growth","termid":"GO:0060420"},{"relation_name":"positively_regulates","term_name":"heart growth","termid":"GO:0060419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart growth","termid":"GO:0060421"}


id: MONDO:0015999
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014359"}]},"cv_name":"mondo","definition":"A form of bilateral adrenocortical hyperplasia that is often associated with adrenocorticotrophin hormone (ACTH) independent Cushing syndrome and is characterized by small to normal sized adrenal glands containing multiple small cortical pigmented nodules (less than 1 cm in diameter).","definition_xrefs":["Orphanet:189439"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ACTH-independent Cushing syndrome","termid":"MONDO:0020529"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"is_obsolete":false,"name":"primary pigmented nodular adrenocortical disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4304832","DOID:0060280","SCTID:719274008","GARD:10906","NCIT:C131196","icd11.foundation:2003695246","MEDGEN:930501","OMIMPS:610489"],"synonyms":[{"name":"PPNAD","type":"exact"},{"name":"pigmented nodular adrenocortical disease","type":"exact"},{"name":"pigmented nodular adrenocortical disease, primary","type":"exact"},{"name":"primary pigmented nodular adrenal dysplasia","type":"exact"}],"termid":"MONDO:0015999","terms_by_termid":{"MONDO:0014359":null},"xrefs":{"Monarch":{"xref_id":"0015999"}}}


id: PBO:0029942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe_with_cut,_elongated_cell_during_cellular_response_to_hydroxyurea","termid":"PBO:0029942"}


id: GO:0018507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,4R)-3,4-dihydrophenanthrene-3,4-diol + NAD+ = H+ + NADH + phenanthrene-3,4-diol.","definition_xrefs":["EC:1.3.1.49","RHEA:16253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cis-3,4-dihydrophenanthrene-3,4-diol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04151","MetaCyc:1.3.1.49-RXN","UM-BBD_reactionID:r0488"],"synonyms":[{"name":"(+)-cis-3,4-dihydrophenanthrene-3,4-diol:NAD+ 3,4-oxidoreductase activity","type":"related"},{"name":"cis-3,4-dihydroxy-3,4-dihydrophenanthrene dehydrogenase activity","type":"exact"}],"termid":"GO:0018507"}


id: PBO:0057835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3151","termid":"PBO:0057835"}


id: MONDO:0024614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term used for any state of depression that is not psychotic.","definition_xrefs":["NCIT:C35369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"depressive disorder","termid":"MONDO:0002050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotic depression","secondary_identifiers":["MEDGEN:76370","UMLS:C0282126"],"synonyms":[{"name":"neurotic depression","type":"exact"}],"termid":"MONDO:0024614","xrefs":{"Monarch":{"xref_id":"0024614"}}}


id: MONDO:1012102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic hepatic fibrosis, non-human animal","termid":"MONDO:1011775"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic hepatic fibrosis, dog","secondary_identifiers":["OMIA:000454-9615"],"termid":"MONDO:1012102","xrefs":{"Monarch":{"xref_id":"1012102"}}}


id: GO:0071926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of an endocannabinoid binding to a cell surface receptor. The pathway proceeds with the receptor transmitting the signal to a heterotrimeric G-protein complex and ends with regulation of a downstream cellular process, e.g. transcription. Endocannabinoids are small molecules derived from arachidonic acid, anandamide (arachidonoylethanolamide) and 2-arachidonoylglycerol.","definition_xrefs":["PMID:15550444","GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cannabinoid signaling pathway","termid":"GO:0038171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endocannabinoid signaling pathway","synonyms":[{"name":"endocannabinoid signalling pathway","type":"exact"}],"termid":"GO:0071926"}


id: PBO:0065442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMC2 pseudogene 1","termid":"PBO:0065442"}


id: PBO:0046552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 6","termid":"PBO:0046552"}


id: GO:0090104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and functional features of a pancreatic epsilon cell. A pancreatic epsilon cell is a cell in the pancreas that secretes ghrelin.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enteroendocrine cell differentiation","termid":"GO:0035883"},{"relation_name":"part_of","term_name":"endocrine pancreas development","termid":"GO:0031018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic epsilon cell differentiation","synonyms":[{"name":"pancreatic E cell differentiation","type":"exact"}],"termid":"GO:0090104"}


id: GO:0042410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CoA + pimelate = AMP + diphosphate + H+ + pimelyl-CoA.","definition_xrefs":["EC:6.2.1.14","RHEA:14781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"6-carboxyhexanoate-CoA ligase activity","secondary_identifiers":["MetaCyc:6-CARBOXYHEXANOATE--COA-LIGASE-RXN","KEGG_REACTION:R03209"],"synonyms":[{"name":"6-carboxyhexanoate:CoA ligase (AMP-forming)","type":"related"},{"name":"6-carboxyhexanoyl-CoA synthetase activity","type":"related"},{"name":"pimeloyl-CoA synthetase activity","type":"related"},{"name":"pimelyl-CoA synthetase activity","type":"related"}],"termid":"GO:0042410"}


id: GO:0035728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hepatocyte growth factor stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hepatocyte growth factor","synonyms":[{"name":"response to HGF stimulus","type":"exact"},{"name":"response to hepatocyte growth factor stimulus","type":"exact"}],"termid":"GO:0035728"}


id: MONDO:0004071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytoma, without designation of benign or malignant, that is found in the supratentorial region. The infratentorial location is more common in children.","definition_xrefs":["NCIT:C4347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood astrocytic tumor","termid":"MONDO:0002505"},{"relation_name":"is_a","term_name":"cerebral hemisphere cancer","termid":"MONDO:0002731"},{"relation_name":"is_a","term_name":"brain glioma","termid":"MONDO:0005499"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"cerebral astrocytoma","termid":"MONDO:0021633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood cerebral astrocytoma","secondary_identifiers":["UMLS:C0338070","MEDGEN:137828","DOID:7007","GARD:9302"],"synonyms":[{"name":"cerebral astrocytoma","type":"broad"},{"name":"cerebral astrocytoma, childhood","type":"related"},{"name":"childhood astrocytic tumor of telencephalon","type":"exact"},{"name":"childhood astrocytic tumour of telencephalon","type":"exact"},{"name":"childhood astrocytoma of cerebrum","type":"exact"},{"name":"childhood astrocytoma of the cerebrum","type":"exact"},{"name":"paediatric astrocytoma of cerebrum","type":"exact"},{"name":"paediatric astrocytoma of the cerebrum","type":"exact"},{"name":"paediatric cerebral astrocytoma","type":"exact"},{"name":"pediatric astrocytoma of cerebrum","type":"exact"},{"name":"pediatric astrocytoma of the cerebrum","type":"exact"},{"name":"pediatric cerebral astrocytoma","type":"exact"},{"name":"telencephalon childhood astrocytic tumor","type":"exact"},{"name":"telencephalon childhood astrocytic tumour","type":"exact"},{"name":"telencephalon juvenile astrocytoma","type":"exact"}],"termid":"MONDO:0004071","xrefs":{"Monarch":{"xref_id":"0004071"}}}


id: GO:0061939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another using c-di-GMP as the signal.","definition_xrefs":["PMID:22864416","PMID:28057864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"c-di-GMP signaling","synonyms":[{"name":"3',5'-cyclic di-GMP signaling","type":"exact"},{"name":"cyclic di-(3':5')-guanosine monophosphate signaling","type":"exact"},{"name":"cyclic di-GMP signaling","type":"exact"},{"name":"cyclic diguanylate signaling","type":"exact"}],"termid":"GO:0061939"}


id: MONDO:0014426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nanophthalmia in which the cause of the disease is a mutation in the TMEM98 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nanophthalmia","termid":"MONDO:0005514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nanophthalmos 4","secondary_identifiers":["UMLS:C4014848","MEDGEN:863285","GARD:18629","OMIM:615972"],"synonyms":[{"name":"NNO4","type":"related"},{"name":"Nanophthalmia 4","type":"related"},{"name":"TMEM98 nanophthalmia","type":"exact"},{"name":"nanophthalmia caused by mutation in TMEM98","type":"exact"},{"name":"nanophthalmos 4","type":"exact"},{"name":"nanophthalmos type 4","type":"exact"}],"termid":"MONDO:0014426","xrefs":{"Monarch":{"xref_id":"0014426"}}}


id: GO:0009568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Plant storage body for amylose and amylopectin, 1-100um in diameter, and located in amyloplasts. Also contains small amounts of enzymes, amino acids, lipids and nucleic acids. The shape of the grain varies widely amongst species, but is often spherical or disk-shaped.","definition_xrefs":["PMID:11217978","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"starch grain","termid":"GO:0043036"},{"relation_name":"part_of","term_name":"amyloplast","termid":"GO:0009501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"amyloplast starch grain","synonyms":[{"name":"amyloplast starch granule","type":"exact"}],"termid":"GO:0009568"}


id: PATO:0000863
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000863 righting reflex value (obsolete PATO:0000863)","termid":"PATO:0000863"}


id: PBO:0030514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_paraquat","termid":"PBO:0030514"}


id: PBO:0041273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 1","termid":"PBO:0041273"}


id: PBO:0030120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030120"}


id: SO:0001821
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe non synonymous variant that inserts bases into in the coding sequence.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_indel","termid":"SO:0001820"},{"relation_name":"is_a","term_name":"internal_feature_elongation","termid":"SO:0001908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inframe_insertion","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http://vat.gersteinlab.org/formats.php","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","SO:0001651"],"synonyms":[{"name":"ANNOVAR:nonframeshift insertion","type":"exact"},{"name":"Jannovar:inframe_insertion","type":"exact"},{"name":"VAT:insertionNFS","type":"exact"},{"name":"VEP:inframe_insertion","type":"exact"},{"name":"inframe codon gain","type":"related"},{"name":"inframe increase in CDS length","type":"exact"},{"name":"inframe insertion","type":"exact"},{"name":"inframe_codon_gain","type":"exact"},{"name":"snpEFF:CODON_INSERTION","type":"exact"}],"termid":"SO:0001821"}


id: GO:0007219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to the receptor Notch on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Notch signaling pathway","secondary_identifiers":["GO:0030179","Reactome:R-HSA-157118","Wikipedia:Notch_signaling_pathway"],"synonyms":[{"name":"N signaling pathway","type":"exact"},{"name":"N signalling pathway","type":"exact"},{"name":"Notch receptor signaling pathway","type":"exact"},{"name":"Notch receptor signalling pathway","type":"exact"},{"name":"Notch signalling pathway","type":"exact"},{"name":"Notch-receptor signaling pathway","type":"exact"},{"name":"Notch-receptor signalling pathway","type":"exact"}],"termid":"GO:0007219"}


id: GO:0036103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving Kdo2-lipid A, a lipopolysaccharide (LPS) component.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"Kdo2-lipid A metabolic process","synonyms":[{"name":"Kdo2-lipid A metabolism","type":"exact"}],"termid":"GO:0036103"}


id: FYPO:0008099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the homologous chromosomes do not migrate toward the spindle pole in spindle elongation phase I (anaphase A).","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished homologous chromosome movement at anaphase A","termid":"FYPO:0008099"}


id: MONDO:0005662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection by parasites of the genus balantidium. The presence of Balantidium in the large intestine leads to diarrhea; dysentery; and occasionally ulcer.","definition_xrefs":["MESH:D001447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"},{"relation_name":"is_a","term_name":"Ciliophora infectious disease","termid":"MONDO:0005704"},{"relation_name":"is_a","term_name":"parasitic intestinal disorder","termid":"MONDO:0024270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"balantidiasis","secondary_identifiers":["icd11.foundation:2090337975","GARD:809","ICD9:007.0","ICD10CM:A07.0","MEDGEN:2540","NCIT:C84583","NORD:833","Orphanet:1223","SCTID:57725006","UMLS:C0004692","DOID:12386","EFO:0007163","MedDRA:10004080"],"synonyms":[{"name":"B coli infection","type":"related"},{"name":"Balantidiases","type":"related"},{"name":"Balantidium coli infection","type":"related"},{"name":"Human balantidiasis","type":"related"},{"name":"balantidiosis","type":"exact"},{"name":"ciliary dysentery","type":"exact"},{"name":"large-intestinal infection with Balantidium coli","type":"related"}],"termid":"MONDO:0005662","xrefs":{"Monarch":{"xref_id":"0005662"}}}


id: MONDO:0002646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute inflammation of the larynx caused by viruses, including rhinovirus, influenza virus, parainfluenza virus, and adenovirus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute laryngitis","termid":"MONDO:0004777"},{"relation_name":"is_a","term_name":"viral respiratory tract infection","termid":"MONDO:0024352"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral laryngitis","secondary_identifiers":["SCTID:441551009","MEDGEN:167276","NCIT:C27305","UMLS:C0853195","ICD9:464.00","DOID:3436"],"synonyms":[{"name":"Viruses caused laryngitis","type":"exact"},{"name":"Viruses laryngitis","type":"exact"}],"termid":"MONDO:0002646","xrefs":{"Monarch":{"xref_id":"0002646"}}}


id: PBO:0084517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; homologous to worm ZK616.6/EMC-4 and fly CG11137; mutation is functionally complemented by human EMC4","termid":"PBO:0084517"}


id: MONDO:0006379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pleural mesothelioma (obsolete MONDO:0006379)","synonyms":[{"name":"obsolete pleural mesothelioma (disease)","type":"exact"}],"termid":"MONDO:0006379","xrefs":{"Monarch":{"xref_id":"0006379"}}}


id: MONDO:1010914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary abnormal increase in muscular tissue caused by enlargement of existing cells in cattle due to a variation in the MSTN gene.","definition_xrefs":["OMIA:000683-9913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular hypertrophy, MSTN-related, cattle","synonyms":[{"name":"double muscling","type":"exact"}],"termid":"MONDO:1010914","xrefs":{"Monarch":{"xref_id":"1010914"}}}


id: PBO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methylsterol oxidase (predicted)","termid":"PBO:0000308"}


id: PBO:0040500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A pseudogene 2","termid":"PBO:0040500"}


id: PBO:0069431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 696, pseudogene","termid":"PBO:0069431"}


id: PBO:0076999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 1","termid":"PBO:0076999"}


id: MOD:01880
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["RESID:AA0564","ChEBI:50038","PubMed:16452303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"4-aminobutylated residue","termid":"MOD:01884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-deoxyhypusine","synonyms":[{"name":"(2S)-2-amino-6-[(4-aminobutyl)amino]hexanoic acid","type":"exact"},{"name":"L-deoxyhypusine","type":"exact"},{"name":"MOD_RES Deoxyhypusine","type":"exact"},{"name":"N6-(4-aminobutyl)lysine","type":"exact"},{"name":"deoxyhypusine","type":"exact"}],"termid":"MOD:01880"}


id: GO:0050122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosamine + H2O + O2 = N-acetyl-D-glucosaminate + H2O2 + H+.","definition_xrefs":["RHEA:13029","EC:1.1.3.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"N-acylhexosamine oxidase activity","secondary_identifiers":["KEGG_REACTION:R01203","MetaCyc:N-ACYLHEXOSAMINE-OXIDASE-RXN"],"synonyms":[{"name":"N-acyl-D-hexosamine oxidase activity","type":"related"},{"name":"N-acyl-D-hexosamine:oxygen 1-oxidoreductase activity","type":"related"},{"name":"N-acyl-beta-D-hexosamine:oxygen 1-oxidoreductase activity","type":"related"}],"termid":"GO:0050122"}


id: PBO:0044093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A1","termid":"PBO:0044093"}


id: CHEBI:29035
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese(2+)","termid":"CHEBI:29035"}


id: PBO:0073954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 3","termid":"PBO:0073954"}


id: PR:O14041
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2C4.08 gene.","definition_xrefs":["UniProtKB:O14041","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized nucleolar protein C2C4.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.08","synonyms":[{"name":"Spom972h-SPAC2C4.08","type":"exact"}],"termid":"PR:O14041"}


id: GO:1900608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tensidol B.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"tensidol B metabolic process","termid":"GO:1900606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"tensidol B biosynthetic process","synonyms":[{"name":"tensidol B anabolism","type":"exact"},{"name":"tensidol B biosynthesis","type":"exact"},{"name":"tensidol B formation","type":"exact"},{"name":"tensidol B synthesis","type":"exact"}],"termid":"GO:1900608"}


id: PBO:0059273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L35 pseudogene 2","termid":"PBO:0059273"}


id: GO:0102722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-hydroxybutyrate + NAD(P) = 4-oxobutanoate + H+ + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-hydroxybutyrate dehydrogenase activity (NAD(P)-dependent (obsolete GO:0102722)","termid":"GO:0102722"}


id: PBO:0030762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_mercury_ion","termid":"PBO:0030762"}


id: PBO:0026866
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane","termid":"PBO:0026866"}


id: GO:0072689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MCM complex, a hexameric protein complex required for the initiation and regulation of DNA replication.","definition_xrefs":["GOC:mah","PMID:21813639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"MCM complex assembly","termid":"GO:0072689"}


id: PBO:0079415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 9","termid":"PBO:0079415"}


id: SO:0000845
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence which is a promoter for RNA polymerase III type 1.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000845 RNApol_III_promoter_type_1_region (obsolete SO:0000845)","termid":"SO:0000845"}


id: MONDO:1012277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"tremor, non-human animal","termid":"MONDO:1011861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, ducks","secondary_identifiers":["OMIA:001016-8835"],"termid":"MONDO:1012277","xrefs":{"Monarch":{"xref_id":"1012277"}}}


id: PBO:0045405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 7","termid":"PBO:0045405"}


id: PBO:0029421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029421"}


id: PBO:0083655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease I-SceII; encoded by a mobile group I intron within the mitochondrial COX1 gene; intron is normally spliced by the BI4p maturase but AI4p can mutate to acquire the same maturase activity","termid":"PBO:0083655"}


id: PBO:0085024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nit protein; one of two proteins in S. cerevisiae with similarity to the Nit domain of NitFhit from fly and worm and to the mouse and human Nit protein which interacts with the Fhit tumor suppressor; nitrilase superfamily member","termid":"PBO:0085024"}


id: PBO:0091569
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by human TELO2","termid":"PBO:0091569"}


id: PBO:0057761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1976","termid":"PBO:0057761"}


id: GO:0017158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion-dependent exocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"regulates","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"}


id: GO:0021775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the transmembrane receptor smoothened in a precursor cell in the ventral spinal cord that contributes to the commitment of the precursor cell to an interneuron fate.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","GOC:jid","PMID:11262869","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway involved in ventral spinal cord patterning","termid":"GO:0021910"},{"relation_name":"part_of","term_name":"ventral spinal cord interneuron specification","termid":"GO:0021521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"smoothened signaling pathway involved in ventral spinal cord interneuron specification","synonyms":[{"name":"hedgehog signaling pathway involved in ventral spinal cord interneuron specification","type":"exact"},{"name":"hh signaling pathway involved in ventral spinal cord interneuron specification","type":"exact"},{"name":"smoothened signalling pathway involved in ventral spinal cord interneuron specification","type":"exact"}],"termid":"GO:0021775"}


id: GO:0052499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogen-associated molecular pattern dependent modulation by organism of symbiont innate immunity (obsolete GO:0052499)","synonyms":[{"name":"pathogen-associated molecular pattern dependent modulation by organism of symbiont innate immunity","type":"exact"}],"termid":"GO:0052499"}


id: GO:0043210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to alkanesulfonates, the anion of alkanesulfonic acids, sulfonic acid derivatives containing an aliphatic hydrocarbon group.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic acid binding","termid":"GO:0043177"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alkanesulfonate binding","termid":"GO:0043210"}


id: MONDO:0015115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic metabolic liver disease (obsolete MONDO:0015115)","secondary_identifiers":["MedDRA:10019689","Orphanet:101940"],"termid":"MONDO:0015115","xrefs":{"Monarch":{"xref_id":"0015115"}}}


id: PATO:0000878
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000878 relative respiratory rate value (obsolete PATO:0000878)","termid":"PATO:0000878"}


id: PBO:0078081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 2","termid":"PBO:0078081"}


id: PBO:0108979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPMIP3 pseudogene 1","termid":"PBO:0108979"}


id: PBO:0046221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 14","termid":"PBO:0046221"}


id: PBO:0031702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_export","termid":"PBO:0031702"}


id: PBO:0073918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 7","termid":"PBO:0073918"}


id: PBO:0045643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 1","termid":"PBO:0045643"}


id: PBO:0047204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 218 member B, pseudogene","termid":"PBO:0047204"}


id: MONDO:0957495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemolytic uremic syndrome","termid":"MONDO:0957097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemolytic uremic syndrome, atypical, 8, with rhizomelic short stature","secondary_identifiers":["MEDGEN:1840221","OMIM:301110","UMLS:C5829585"],"termid":"MONDO:0957495","xrefs":{"Monarch":{"xref_id":"0957495"}}}


id: PBO:0047445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIa","termid":"PBO:0047445"}


id: GO:0005546
data:
  {"annotated_genes":["SJAG_02572","SJAG_00118","SJAG_02613","SJAG_04644","SJAG_01748","SJAG_00117","SJAG_02166","SJAG_02657","SJAG_01143","SJAG_05179","SJAG_04960","SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63232,72955,74033,88335,91089,99614,102085,106913,115189,117339,117836,119278],"is_not":false,"summary":null,"term":"GO:0005546"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol-4,5-bisphosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 4' and 5' positions.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"phosphatidylinositol bisphosphate binding","termid":"GO:1902936"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00118":null,"SJAG_00368":null,"SJAG_01143":null,"SJAG_01748":null,"SJAG_02166":null,"SJAG_02572":null,"SJAG_02613":null,"SJAG_02657":null,"SJAG_04644":null,"SJAG_04960":null,"SJAG_05179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate binding","type":"exact"},{"name":"PIP2 binding","type":"broad"},{"name":"PtdIns(4,5)P2 binding","type":"exact"},{"name":"phosphatidylinositol 4,5-bisphosphate binding","type":"exact"}],"termid":"GO:0005546","terms_by_termid":{"GO:0005546":null}}


id: FYPO:0007229
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which 3'-deoxyribose phosphate lyase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal 3'-deoxyribose phosphate lyase activity","termid":"FYPO:0007228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abolished 3'-deoxyribose phosphate lyase activity","synonyms":[{"name":"3'-deoxyribose phosphate lyase activity abolished","type":"exact"},{"name":"abolished 3'-dRP lyase activity","type":"exact"}],"termid":"FYPO:0007229"}


id: GO:0046727
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the protein subunits that comprise the closed shell or coat (capsid) of certain viruses.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"capsomere","secondary_identifiers":["Wikipedia:Capsomere"],"synonyms":[{"name":"capsomer","type":"exact"}],"termid":"GO:0046727"}


id: PBO:0001766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDR subfamily","termid":"PBO:0001766"}


id: PR:O94756
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.03","synonyms":[{"name":"Spom972h-meu14","type":"exact"}],"termid":"PR:O94756"}


id: GO:0006436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling tryptophan to tryptophanyl-tRNA, catalyzed by tryptophanyl-tRNA synthetase. The tryptophanyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a tryptophan-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467","GO:0006520"],"is_obsolete":false,"name":"tryptophanyl-tRNA aminoacylation","termid":"GO:0006436"}


id: PBO:0089426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA-binding protein, involved in splicing","termid":"PBO:0089426"}


id: GO:0009075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving amino acids of the histidine family.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histidine family amino acid metabolic process (obsolete GO:0009075)","synonyms":[{"name":"histidine family amino acid metabolic process","type":"exact"},{"name":"histidine family amino acid metabolism","type":"exact"}],"termid":"GO:0009075"}


id: MONDO:0022651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cardiomyopathy dilated with conduction defect type 1 (obsolete MONDO:0022651)","termid":"MONDO:0022651","xrefs":{"Monarch":{"xref_id":"0022651"}}}


id: PBO:0075116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 165","termid":"PBO:0075116"}


id: MONDO:0002447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor arising from the epithelium that lines the cavity of the uterine body. The vast majority of endometrial carcinomas are adenocarcinomas; squamous cell and adenosquamous carcinomas represent a minority of the cases. Endometrioid adenocarcinoma is the most frequently seen variant of endometrial adenocarcinoma. Uterine bleeding is an initial clinical sign. The prognosis depends on the stage of the tumor, the depth of myometrial wall invasion, and the degree of differentiation.","definition_xrefs":["NCIT:C7558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine carcinoma","termid":"MONDO:0005213"},{"relation_name":"is_a","term_name":"endometrial cancer","termid":"MONDO:0011962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial carcinoma","secondary_identifiers":["DOID:2871","icd11.foundation:1123821211","MEDGEN:96903","SCTID:254878006","ONCOTREE:UCEC","UMLS:C0476089","HP:0012114","EFO:1001512"],"synonyms":[{"name":"carcinoma of endometrium","type":"exact"},{"name":"carcinoma of the endometrium","type":"exact"},{"name":"carcinoma, endometrial, malignant","type":"exact"},{"name":"endometrial cancer","type":"broad"},{"name":"endometrial carcinoma","type":"exact"},{"name":"endometrial carcinoma (disease)","type":"exact"},{"name":"endometrium carcinoma","type":"exact"}],"termid":"MONDO:0002447","xrefs":{"Monarch":{"xref_id":"0002447"}}}


id: MONDO:1012399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anal sac gland carcinoma, non-human animal","termid":"MONDO:1011817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal sac gland carcinoma, dog","secondary_identifiers":["OMIA:001500-9615"],"termid":"MONDO:1012399","xrefs":{"Monarch":{"xref_id":"1012399"}}}


id: GO:0048373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a lateral mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate determination","termid":"GO:0007500"},{"relation_name":"part_of","term_name":"lateral mesodermal cell fate commitment","termid":"GO:0048372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesodermal cell fate determination","synonyms":[{"name":"lateral mesoderm cell fate determination","type":"exact"},{"name":"lateral plate mesoderm cell fate determination","type":"exact"},{"name":"lateral plate mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048373"}


id: PBO:0039647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 subunit gamma 1","termid":"PBO:0039647"}


id: GO:0035952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of oligopeptide transport by stopping, preventing or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:17005992","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of oligopeptide transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0035952)","synonyms":[{"name":"negative regulation of oligopeptide transport by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of oligopeptide transport by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of oligopeptide transport by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of oligopeptide transport by inhibition of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of oligopeptide transport by negative regulation of transcription from Pol II promoter","type":"exact"}],"termid":"GO:0035952"}


id: PBO:0076888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 41","termid":"PBO:0076888"}


id: MONDO:0000905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cortisone reductase deficiency (obsolete MONDO:0000905)","termid":"MONDO:0000905","xrefs":{"Monarch":{"xref_id":"0000905"}}}


id: MONDO:0031062
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  {"annotated_genes":["SJAG_00394"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86113],"is_not":false,"summary":null,"term":"MONDO:0031062"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic kidney disease","termid":"MONDO:0004691"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00394":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005240"],"is_obsolete":false,"name":"polycystic kidney disease 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774222","DOID:0060952","OMIM:620056","MEDGEN:1823995"],"synonyms":[{"name":"PKD7","type":"exact"},{"name":"polycystic kidney disease 7","type":"exact"}],"termid":"MONDO:0031062","terms_by_termid":{"MONDO:0031062":null},"xrefs":{"Monarch":{"xref_id":"0031062"}}}


id: PBO:0026714
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_RNA_polymerase_II_promoter_during_vegetative_growth","termid":"PBO:0026714"}


id: PBO:0082673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the eisosome required for proper eisosome assembly; similar to Uso1p; authentic, non-tagged protein is detected in a phosphorylated state in highly purified mitochondria in high-throughput studies; protein increases in abundance and relocalizes from plasma membrane to cytoplasm upon DNA replication stress; EIS1 has a paralog, YKL050C, that arose from the whole genome duplication","termid":"PBO:0082673"}


id: GO:1902527
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id: GO:0019129
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id: MONDO:0016621
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile Huntington disease (JHD) is a form of Huntington disease (HD), characterized by onset of signs and symptoms before 20 years of age.","definition_xrefs":["Orphanet:248111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease","termid":"MONDO:0007739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"juvenile Huntington disease","secondary_identifiers":["GARD:10510","MEDGEN:155518","SCTID:230299004","UMLS:C0751208","NCIT:C147072"],"synonyms":[{"name":"Huntington disease, juvenile onset","type":"related"},{"name":"JHD","type":"exact"},{"name":"juvenile Huntington chorea","type":"exact"},{"name":"juvenile onset HD","type":"related"}],"termid":"MONDO:0016621","xrefs":{"Monarch":{"xref_id":"0016621"}}}


id: MONDO:0013866
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis in which the cause of the disease is a mutation in the GRN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult neuronal ceroid lipofuscinosis","termid":"MONDO:0019260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0002039","MONDO:0005559","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis 11","secondary_identifiers":["MEDGEN:761331","DOID:0110732","GARD:17426","Orphanet:314629","UMLS:C3539123","OMIM:614706"],"synonyms":[{"name":"CLN11","type":"exact"},{"name":"CLN11 disease","type":"related"},{"name":"GRN neuronal ceroid lipofuscinosis","type":"exact"},{"name":"Grn neuronal ceroid lipofuscinosis","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 11","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, type 11","type":"exact"},{"name":"neuronal ceroid lipofuscinosis caused by mutation in GRN","type":"exact"},{"name":"neuronal ceroid lipofuscinosis caused by mutation in Grn","type":"exact"},{"name":"neuronal ceroid lipofuscinosis type 11","type":"exact"}],"termid":"MONDO:0013866","xrefs":{"Monarch":{"xref_id":"0013866"}}}


id: GO:2000917
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucuronoxylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucuronoxylan catabolic process","termid":"GO:2000915"},{"relation_name":"is_a","term_name":"positive regulation of xylan catabolic process","termid":"GO:2001002"},{"relation_name":"positively_regulates","term_name":"glucuronoxylan catabolic process","termid":"GO:2000886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of glucuronoxylan catabolic process","synonyms":[{"name":"positive regulation of glucuronoxylan catabolism","type":"exact"}],"termid":"GO:2000917"}


id: MONDO:0017897
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id: GO:0022618
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id: GO:0120320
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id: MONDO:0030476
data:
  {"annotated_genes":["SJAG_04700"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86391],"is_not":false,"summary":null,"term":"MONDO:0030476"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Galloway-Mowat syndrome","termid":"MONDO:0009627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Galloway-Mowat syndrome 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794230","OMIM:619609","UMLS:C5562020"],"synonyms":[{"name":"GAMOS10","type":"exact"}],"termid":"MONDO:0030476","terms_by_termid":{"MONDO:0030476":null},"xrefs":{"Monarch":{"xref_id":"0030476"}}}


id: PBO:0055339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2767","termid":"PBO:0055339"}


id: _global:during_which_ends
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during_which_ends","secondary_identifiers":["RO:0002084"],"termid":"_global:during_which_ends"}


id: PBO:0039419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin 2","termid":"PBO:0039419"}


id: GO:1905758
data:
  {"annotated_genes":["SJAG_04666","SJAG_04597","SJAG_04776"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87877,92761,94753],"is_not":false,"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of primary cell septum biogenesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:27898700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"regulation of primary cell septum biogenesis","termid":"GO:1905756"},{"relation_name":"positively_regulates","term_name":"primary cell septum biogenesis","termid":"GO:0031671"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0008150","GO:0000281"],"is_obsolete":false,"name":"positive regulation of primary cell septum biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905758","terms_by_termid":{"GO:1905758":null}}


id: MONDO:0024616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disease involving a pathogenic inflammatory response in the tympanic membrane.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tympanic membrane disorder","termid":"MONDO:0003648"},{"relation_name":"is_a","term_name":"otitis media","termid":"MONDO:0005441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tympanitis","secondary_identifiers":["icd11.foundation:225078522","SCTID:14852000","MEDGEN:507971","UMLS:C0027134"],"synonyms":[{"name":"inflammation of tympanic membrane","type":"exact"},{"name":"myringitis","type":"exact"},{"name":"tympanic membrane inflammation","type":"exact"}],"termid":"MONDO:0024616","xrefs":{"Monarch":{"xref_id":"0024616"}}}


id: PBO:0068629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 9, pseudogene","termid":"PBO:0068629"}


id: PBO:0078719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAA) 4-1","termid":"PBO:0078719"}


id: PBO:0052252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 21","termid":"PBO:0052252"}


id: MONDO:0002059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete breast duct papilloma (obsolete MONDO:0002059)","termid":"MONDO:0002059","xrefs":{"Monarch":{"xref_id":"0002059"}}}


id: GO:0050951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a sensory temperature stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of temperature stimulus","synonyms":[{"name":"sensory perception of thermal stimulus","type":"exact"}],"termid":"GO:0050951"}


id: SO:0000383
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-translated 93 nt antisense RNA that binds its target ompF mRNA and regulates ompF expression by inhibiting translation and inducing degradation of the message.","direct_ancestors":[{"relation_name":"is_a","term_name":"antisense_RNA","termid":"SO:0000644"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MicF_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/MicF_RNA"],"synonyms":[{"name":"MicF RNA","type":"exact"}],"termid":"SO:0000383"}


id: FYPO:0005952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is normal (i.e. indistinguishable from wild type) in chromatin regions where RNA polymerase II actively transcribes genes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:28218250","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning in euchromatin","termid":"FYPO:0000857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes","synonyms":[{"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"},{"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"}],"termid":"FYPO:0005952"}


id: MONDO:0021193
data:
  {"annotated_genes":["SJAG_04213","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87661,87662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A neoplasm of the nervous system that arises from the neuroepithelial tissues. Representative examples include astrocytic tumors, oligodendroglial tumors, ependymal tumors, and primitive neuroectodermal tumors.","definition_xrefs":["NCIT:C3787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system neoplasm","termid":"MONDO:0021248"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null},"genotype_count":0,"is_obsolete":false,"name":"neuroepithelial neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D018302","ONCOTREE:PRNET","MEDGEN:60215","UMLS:C0206715"],"synonyms":[{"name":"neoplasm of neuroepithelial tissue","type":"exact"},{"name":"neoplasm of neuroepithelium","type":"exact"},{"name":"neoplasm of the neuroepithelium","type":"exact"},{"name":"neuroepithelial neoplasm","type":"exact"},{"name":"neuroepithelial neoplasms","type":"exact"},{"name":"neuroepithelial tissue neoplasm","type":"exact"},{"name":"neuroepithelial tissue tumor","type":"exact"},{"name":"neuroepithelial tissue tumour","type":"exact"},{"name":"neuroepithelial tumor","type":"exact"},{"name":"neuroepithelial tumors","type":"exact"},{"name":"neuroepithelial tumour","type":"exact"},{"name":"neuroepithelial tumours","type":"exact"},{"name":"primary neuroepithelial tumor","type":"related"},{"name":"primary neuroepithelial tumour","type":"related"},{"name":"tumor of neuroepithelial tissue","type":"exact"},{"name":"tumor of neuroepithelium","type":"exact"},{"name":"tumor of the neuroepithelium","type":"exact"},{"name":"tumour of neuroepithelial tissue","type":"exact"},{"name":"tumour of neuroepithelium","type":"exact"},{"name":"tumour of the neuroepithelium","type":"exact"}],"termid":"MONDO:0021193","terms_by_termid":{"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0021193"}}}


id: GO:0120248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an acetylenic compound, any compound which contains a carbon-carbon triple bond (aka C#C).","definition_xrefs":["DOI:10.1007/978-1-4615-4913-0_3","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"acetylenic compound metabolic process","termid":"GO:0120246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylenic compound catabolic process","synonyms":[{"name":"alkyne substituted compound breakdown","type":"exact"},{"name":"alkyne substituted compound catabolic process","type":"exact"},{"name":"alkyne substituted compound catabolism","type":"exact"},{"name":"alkyne substituted compound degradation","type":"exact"}],"termid":"GO:0120248"}


id: PBO:0031773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_G0_to_G1_transition","termid":"PBO:0031773"}


id: PBO:0004390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR93","termid":"PBO:0004390"}


id: GO:1902199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-methylbut-2-enoyl-CoA(4-).","definition_xrefs":["PMID:11231285","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"3-methylbut-2-enoyl-CoA(4-) metabolic process","termid":"GO:1902198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0055086","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"3-methylbut-2-enoyl-CoA(4-) catabolic process","synonyms":[{"name":"3-methylbut-2-enoyl-CoA(4-) breakdown","type":"exact"},{"name":"3-methylbut-2-enoyl-CoA(4-) catabolism","type":"exact"},{"name":"3-methylbut-2-enoyl-CoA(4-) degradation","type":"exact"}],"termid":"GO:1902199"}


id: MONDO:0001228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute conjunctivitis","termid":"MONDO:0001214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctival folliculosis","secondary_identifiers":["ICD9:372.02","MEDGEN:509806","UMLS:C0155143","DOID:11219","SCTID:41308008"],"synonyms":[{"name":"acute follicular conjunctivitis","type":"exact"}],"termid":"MONDO:0001228","xrefs":{"Monarch":{"xref_id":"0001228"}}}


id: PBO:0067971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 273","termid":"PBO:0067971"}


id: PBO:0003968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family protein","termid":"PBO:0003968"}


id: FYPO:0000759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to lead ions. Cells stop growing (and may die) at a concentration of lead ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to lead","synonyms":[{"name":"hypersensitive to lead","type":"exact"},{"name":"sensitive to lead during mitotic cell cycle","type":"related"},{"name":"sensitive to lead during vegetative growth","type":"exact"},{"name":"sensitive to lead ions","type":"exact"}],"termid":"FYPO:0000759"}


id: PBO:0018287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein involved in ER membrane tethering","termid":"PBO:0018287"}


id: FYPO:0007481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an increase in the transcription of one or more target genes that would normally occur when cells are subjected to a stress in the presence of a specific small molecule occurs to a lower extent than normal under the same circumstances.","definition_xrefs":["PMID:31932483","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"attenuated increase in transcription during cellular response to stress in presence of small molecule","synonyms":[{"name":"attenuated increase in transcription during cellular response to stress in presence of small molecule during mitotic cell cycle","type":"related"},{"name":"attenuated increase in transcription during cellular response to stress in presence of small molecule during vegetative growth","type":"exact"}],"termid":"FYPO:0007481"}


id: GO:0052108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont during interaction with host (obsolete GO:0052108)","synonyms":[{"name":"growth or development of organism during interaction with host","type":"exact"},{"name":"growth or development of organism in response to host","type":"exact"},{"name":"growth or development of symbiont during interaction with host","type":"exact"}],"termid":"GO:0052108"}


id: GO:0033866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleoside bisphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate metabolic process","termid":"GO:0033865"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nucleoside bisphosphate biosynthetic process","synonyms":[{"name":"nucleoside bisphosphate anabolism","type":"exact"},{"name":"nucleoside bisphosphate biosynthesis","type":"exact"},{"name":"nucleoside bisphosphate formation","type":"exact"},{"name":"nucleoside bisphosphatehate synthesis","type":"exact"}],"termid":"GO:0033866"}


id: GO:0046897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of the N-terminal tyrosine of proteins to form the derivative N-methyl-L-tyrosine.","definition_xrefs":["RESID:AA0338"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-tyrosine methylation (obsolete GO:0046897)","termid":"GO:0046897"}


id: GO:0099025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic membrane (obsolete GO:0099025)","termid":"GO:0099025"}


id: PBO:0071562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 28","termid":"PBO:0071562"}


id: PBO:0084277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein localized to mitochondria; required for sporulation and maintaining sphingolipid content; similar to SUR7; FMP45 has a paralog, YNL194C, that arose from the whole genome duplication","termid":"PBO:0084277"}


id: PBO:0111940
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kip2 subfamily","termid":"PBO:0111940"}


id: PBO:0047065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 124 member B","termid":"PBO:0047065"}


id: FYPO:0001084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in the cell wall is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell wall polysaccharide level","termid":"FYPO:0004859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002946","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cell wall alpha-glucan level","synonyms":[{"name":"increased cell wall alpha-D-glucan level","type":"exact"},{"name":"increased cell wall alpha-glucan accumulation","type":"related"},{"name":"increased cell wall alpha-glucan level during mitotic cell cycle","type":"related"},{"name":"increased cell wall alpha-glucan level during vegetative growth","type":"exact"}],"termid":"FYPO:0001084"}


id: GO:0032223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic transmission, cholinergic","termid":"GO:0032222"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"},{"relation_name":"negatively_regulates","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic transmission, cholinergic","synonyms":[{"name":"down regulation of synaptic transmission, cholinergic","type":"exact"},{"name":"down-regulation of synaptic transmission, cholinergic","type":"exact"},{"name":"downregulation of synaptic transmission, cholinergic","type":"exact"},{"name":"inhibition of synaptic transmission, cholinergic","type":"narrow"}],"termid":"GO:0032223"}


id: PBO:0047543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 2","termid":"PBO:0047543"}


id: MONDO:0005719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the coronavirus genus. Some specifics include transmissible enteritis of turkeys (enteritis, transmissible, of turkeys); feline infectious peritonitis; and transmissible gastroenteritis of swine (gastroenteritis, transmissible, of swine).","definition_xrefs":["MESH:D018352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Coronaviridae infectious disease","termid":"MONDO:0005718"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coronavinae infectious disease","secondary_identifiers":["EFO:0007224"],"termid":"MONDO:0005719","xrefs":{"Monarch":{"xref_id":"0005719"}}}


id: MONDO:0007875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Larsen syndrome (LS) is a rare skeletal dysplasia characterized by congenital dislocation of large joints, foot deformities, cervical spine dysplasia, scoliosis, spatula-shaped distal phalanges and distinctive craniofacial abnormalities, including cleft palate.","definition_xrefs":["Orphanet:503"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"filamin-related bone disorder","termid":"MONDO:0019690"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Larsen syndrome","secondary_identifiers":["DOID:14764","ICD9:759.89","NORD:1349","OMIM:150250","MESH:C580241","SCTID:63387002","MEDGEN:104500","UMLS:C0175778","icd11.foundation:607849551","NANDO:2201019","GARD:6860"],"synonyms":[{"name":"LRS","type":"related"},{"name":"Larsen syndrome","type":"exact"},{"name":"autosomal dominant Larsen syndrome","type":"related"},{"name":"dominant Larsen syndrome","type":"exact"}],"termid":"MONDO:0007875","xrefs":{"Monarch":{"xref_id":"0007875"}}}


id: PBO:0088423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA-specific 2-thiouridylase Slm3","termid":"PBO:0088423"}


id: GO:1905035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an antifungal innate immune response.","definition_xrefs":["GOC:dph","GO_REF:0000058","GOC:TermGenie","PMID:22470487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"regulation of antifungal innate immune response","termid":"GO:1905034"},{"relation_name":"negatively_regulates","term_name":"antifungal innate immune response","termid":"GO:0061760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antifungal innate immune response","synonyms":[{"name":"down regulation of antifungal innate immune response","type":"exact"},{"name":"down-regulation of antifungal innate immune response","type":"exact"},{"name":"downregulation of antifungal innate immune response","type":"exact"},{"name":"inhibition of antifungal innate immune response","type":"narrow"}],"termid":"GO:1905035"}


id: GO:2001146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (obsolete GO:2001146)","termid":"GO:2001146"}


id: PBO:0110105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase, type II Lsb6","termid":"PBO:0110105"}


id: GO:0002516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The apoptotic death of B cells which is part of B cell tolerance induction.","definition_xrefs":["GOC:add","GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell apoptotic process","termid":"GO:0001783"},{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell deletion","synonyms":[{"name":"B lymphocyte deletion","type":"exact"},{"name":"B-cell deletion","type":"exact"},{"name":"B-lymphocyte deletion","type":"exact"}],"termid":"GO:0002516"}


id: PBO:0053126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCORL pseudogene 1","termid":"PBO:0053126"}


id: PBO:0056026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 4","termid":"PBO:0056026"}


id: PBO:0027653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitotic_S_phase_during_cellular_response_to_ionizing_radiation","termid":"PBO:0027653"}


id: PBO:0087590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches; mutation is functionally complemented by human ARPC4","termid":"PBO:0087590"}


id: PBO:0090620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc6","termid":"PBO:0090620"}


id: GO:0009823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cytokinins, a class of adenine-derived compounds that can function in plants as plant growth regulators.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin metabolic process","termid":"GO:0009690"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytokinin catabolic process","synonyms":[{"name":"cytokinin breakdown","type":"exact"},{"name":"cytokinin catabolism","type":"exact"},{"name":"cytokinin degradation","type":"exact"}],"termid":"GO:0009823"}


id: GO:0140439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a stearoyl (systematic name, octadecanoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction: octadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-octadecanoyl-L-cysteinyl-[protein].","definition_xrefs":["PMID:22968831","PMID:22247542","RHEA:59740","PMID:12681491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"protein-cysteine S-stearoyltransferase activity","termid":"GO:0140439"}


id: GO:0005225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic anion by a volume-sensitive channel. A volume-sensitive channel is a channel that responds to changes in the volume of a cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"volume-sensitive anion channel activity","secondary_identifiers":["Reactome:R-HSA-8941543"],"synonyms":[{"name":"volume-regulated channel","type":"broad"}],"termid":"GO:0005225"}


id: PBO:0083023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; included in the original annotation of Chromosome III but later withdrawn","termid":"PBO:0083023"}


id: PR:Q9HDZ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC589.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDZ8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C589.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.06c","synonyms":[{"name":"Spom972h-SPAC589.06c","type":"exact"}],"termid":"PR:Q9HDZ8"}


id: PBO:0073614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SID1 transmembrane family member 1","termid":"PBO:0073614"}


id: MONDO:0020351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blake pouch cyst is a non-syndromic, usually benign, cystic malformation of the posterior fossa characterized by a midline outpouching of the superior medullary velum into the cisterna magna that results from failure of the rudimental fourth ventricular tela choroidea to regress during embryogenesis. Patients can be asymptomatic or present in childhood or adulthood with clinical manifestations of hydrocephalus, such as headache, hypotonia, vertigo, syncope, vomiting, blurred or double vision, nystagmus, papilledema, and delayed gait development.","definition_xrefs":["Orphanet:98922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic malformation of the posterior fossa","termid":"MONDO:0020134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"Blake pouch cyst","secondary_identifiers":["MEDGEN:783279","GARD:19603","UMLS:C3662124"],"termid":"MONDO:0020351","xrefs":{"Monarch":{"xref_id":"0020351"}}}


id: MOD:00983
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asp transamidation with piperidine","termid":"MOD:00983"}


id: PBO:0049073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 89B","termid":"PBO:0049073"}


id: GO:0046341
data:
  {"annotated_genes":["SJAG_01233","SJAG_00426","SJAG_03563","SJAG_00168"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80421,113324,119478,114981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016024"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving CDP-diacylglycerol, CDP-1,2-diacylglycerol, a substance composed of diacylglycerol in glycosidic linkage with cytidine diphosphate. It is a common intermediate in phospholipid biosynthesis.","definition_xrefs":["PMID:24533860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00426":null,"SJAG_01233":null,"SJAG_03563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"CDP-diacylglycerol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25318672":null},"synonyms":[{"name":"CDP-diacylglycerol metabolism","type":"exact"}],"termid":"GO:0046341","terms_by_termid":{"GO:0016024":null}}


id: GO:0062149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of pain in which a stimulus is received and converted into a molecular signal.","definition_xrefs":["PMID:19837031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"part_of","term_name":"sensory perception of pain","termid":"GO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of stimulus involved in sensory perception of pain","termid":"GO:0062149"}


id: GO:0015534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (proline, glycine or betaine)(out) + (H+ or Na+)(out) = (proline, glycine or betaine)(in) + (H+ or Na+)(in).","definition_xrefs":["TC:2.A.1.6.4"],"gene_count":0,"genotype_count":0,"name":"obsolete proline/glycine/betaine:hydrogen/sodium symporter activity (obsolete GO:0015534)","synonyms":[{"name":"proline/glycine/betaine:hydrogen/sodium symporter activity","type":"exact"},{"name":"proline/glycine/betaine:proton/sodium symporter","type":"exact"}],"termid":"GO:0015534"}


id: GO:1903931
data:
  {"annotated_genes":["SJAG_04712"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88796],"is_not":false,"summary":null,"term":"GO:1903931"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pyrimidine-containing compound salvage.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23695302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of pyrimidine-containing compound salvage","termid":"GO:1903930"},{"relation_name":"positively_regulates","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pyrimidine-containing compound salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of pyrimidine salvage","type":"related"},{"name":"activation of pyrimidine-containing compound salvage","type":"narrow"},{"name":"positive regulation of pyrimidine salvage","type":"related"},{"name":"up regulation of pyrimidine salvage","type":"related"},{"name":"up regulation of pyrimidine-containing compound salvage","type":"exact"},{"name":"up-regulation of pyrimidine salvage","type":"related"},{"name":"up-regulation of pyrimidine-containing compound salvage","type":"exact"},{"name":"upregulation of pyrimidine salvage","type":"related"},{"name":"upregulation of pyrimidine-containing compound salvage","type":"exact"}],"termid":"GO:1903931","terms_by_termid":{"GO:1903931":null}}


id: MONDO:0016897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 19","termid":"MONDO:0016881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the short arm of chromosome 19","secondary_identifiers":["UMLS:C5679672","GARD:20819","icd11.foundation:1325170119","MEDGEN:1826022","Orphanet:261983"],"synonyms":[{"name":"partial deletion of chromosome 19p","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 19","type":"exact"},{"name":"partial monosomy of chromosome 19p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 19","type":"exact"}],"termid":"MONDO:0016897","xrefs":{"Monarch":{"xref_id":"0016897"}}}


id: FYPO:0005714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleolus begins earlier than normal.","definition_xrefs":["PMID:17538026","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleolus","termid":"FYPO:0003687"},{"relation_name":"is_a","term_name":"premature protein localization to nucleus during vegetative growth","termid":"FYPO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"premature protein localization to nucleolus","synonyms":[{"name":"advanced protein localization to nucleolus","type":"exact"},{"name":"precocious protein localization to nucleolus","type":"related"},{"name":"premature protein localisation to nucleolus","type":"exact"},{"name":"premature protein localization to nucleolus during mitotic cell cycle","type":"related"},{"name":"premature protein localization to nucleolus during vegetative growth","type":"exact"}],"termid":"FYPO:0005714"}


id: MONDO:0958205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yuksel-Vogel-Bauer syndrome","secondary_identifiers":["UMLS:C5882751","MEDGEN:1847314","OMIM:620703"],"termid":"MONDO:0958205","xrefs":{"Monarch":{"xref_id":"0958205"}}}


id: MONDO:0007183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azotemia, familial","secondary_identifiers":["MEDGEN:400033","OMIM:109160","MESH:C566233","UMLS:C1862358"],"synonyms":[{"name":"azotemia, familial","type":"exact"}],"termid":"MONDO:0007183","xrefs":{"Monarch":{"xref_id":"0007183"}}}


id: PBO:0075434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member C","termid":"PBO:0075434"}


id: PBO:0089638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall beta-glucosidase Adg3","termid":"PBO:0089638"}


id: PBO:0058586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6719","termid":"PBO:0058586"}


id: GO:0050509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-O-{alpha-D-GlcNAc-[(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNAc](n)-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl}-L-seryl-[protein] + UDP-alpha-D-glucuronate = 3-O-{[(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNAc](n+1)-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl}-L-seryl-[protein] + H+ + UDP.","definition_xrefs":["EC:2.4.1.225","MetaCyc:2.4.1.225-RXN","RHEA:20908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2076392","Reactome:R-HSA-3656257","Reactome:R-HSA-3656267","Reactome:R-HSA-9036285","Reactome:R-HSA-9036289","Reactome:R-HSA-2022856"],"synonyms":[{"name":"N-acetylglucosaminyl-proteoglycan 4-b-glucuronosyltransferase activity","type":"exact"},{"name":"N-acetylglucosaminylproteoglycan beta-1,4-glucuronyltransferase activity","type":"related"},{"name":"UDP-alpha-D-glucuronate:N-acetyl-alpha-D-glucosaminyl-(1->4)-beta-D-glucuronosyl-proteoglycan 4-beta-glucuronosyltransferase activity","type":"related"},{"name":"heparan glucuronyltransferase II activity","type":"related"}],"termid":"GO:0050509"}


id: PATO:0002125
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's consisting a knot-like mass.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nodular","termid":"PATO:0002125"}


id: PBO:0030181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population","termid":"PBO:0030181"}


id: PBO:0051233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-31-1 (pseudogene)","termid":"PBO:0051233"}


id: PBO:0049147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 4","termid":"PBO:0049147"}


id: PBO:0017854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transmembrane transporter Abc3, unknown specificity","termid":"PBO:0017854"}


id: MONDO:1012223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive axonopathy, non-human animal","termid":"MONDO:1011856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive axonopathy, dog","secondary_identifiers":["OMIA:000825-9615"],"termid":"MONDO:1012223","xrefs":{"Monarch":{"xref_id":"1012223"}}}


id: MONDO:0022662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carpo tarsal osteolysis recessive","termid":"MONDO:0022662","xrefs":{"Monarch":{"xref_id":"0022662"}}}


id: PBO:0002396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial splicing suppressor Mss51 (predicted)","termid":"PBO:0002396"}


id: PBO:0016517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M17 cytoplasmic leucyl aminopeptidase yspII (LAP yspII)","termid":"PBO:0016517"}


id: MONDO:0005324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Allergic rhinitis caused by outdoor allergens.","definition_xrefs":["NCIT:C92188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic rhinitis","termid":"MONDO:0011786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"seasonal allergic rhinitis","secondary_identifiers":["EFO:0003956","MEDGEN:42335","SCTID:367498001","UMLS:C0018621","MESH:D006255"],"synonyms":[{"name":"hay fever","type":"exact"},{"name":"seasonal allergic rhinitis","type":"exact"}],"termid":"MONDO:0005324","xrefs":{"Monarch":{"xref_id":"0005324"}}}


id: GO:0009473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c7 (triheme) (obsolete GO:0009473)","synonyms":[{"name":"cytochrome c7 (triheme)","type":"exact"}],"termid":"GO:0009473"}


id: PBO:0053102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope pseudogene 1","termid":"PBO:0053102"}


id: FYPO:0003810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which  mitochondria are smaller and more numerous than normal. Total mitochondrial volume is usually similar to normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"small fragmented mitochondria","termid":"FYPO:0007193"},{"relation_name":"has_part","term_name":"mitochondria present in increased numbers","termid":"FYPO:0007194"},{"relation_name":"has_part","term_name":"normal mitochondrial volume","termid":"FYPO:0007210"},{"relation_name":"is_a","term_name":"small fragmented mitochondria","termid":"FYPO:0007193"},{"relation_name":"is_a","term_name":"normal mitochondrial volume","termid":"FYPO:0007210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000257","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"small fragmented mitochondria present in increased numbers","synonyms":[{"name":"fragmented mitochondria","type":"related"},{"name":"small mitochondria present in increased numbers during mitotic cell cycle","type":"related"},{"name":"small mitochondria present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0003810"}


id: FYPO:0000844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mercaptoethanol. Cells stop growing (and may die) at a concentration of mercaptoethanol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to mercaptoethanol","synonyms":[{"name":"hypersensitive to mercaptoethanol","type":"exact"},{"name":"sensitive to 2-sulfanylethanol","type":"exact"},{"name":"sensitive to mercaptoethanol during mitotic cell cycle","type":"related"},{"name":"sensitive to mercaptoethanol during vegetative growth","type":"exact"}],"termid":"FYPO:0000844"}


id: PBO:0050724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 10","termid":"PBO:0050724"}


id: MONDO:0004132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma arising from the mucosa of the anal canal.","definition_xrefs":["NCIT:C7469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anal squamous cell carcinoma","termid":"MONDO:0006082"},{"relation_name":"is_a","term_name":"anal canal carcinoma","termid":"MONDO:0007108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"anal canal squamous cell carcinoma","secondary_identifiers":["Orphanet:424019","DOID:7177","UMLS:C1332262","icd11.foundation:585238371","GARD:21774","MEDGEN:233979"],"synonyms":[{"name":"anal canal squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of the anal canal","type":"exact"}],"termid":"MONDO:0004132","xrefs":{"Monarch":{"xref_id":"0004132"}}}


id: PBO:0051104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-17 (pseudogene)","termid":"PBO:0051104"}


id: PBO:0074610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 14B","termid":"PBO:0074610"}


id: PBO:0057943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3667 host gene","termid":"PBO:0057943"}


id: PBO:0039475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18E, pseudogene","termid":"PBO:0039475"}


id: PBO:0004998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA biogenesis protein (predicted)","termid":"PBO:0004998"}


id: PBO:0068519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 114, pseudogene","termid":"PBO:0068519"}


id: MONDO:0006030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recurrent infections of the urinary bladder.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic cystitis","secondary_identifiers":["MEDGEN:65146","UMLS:C0221763","DOID:1680","EFO:1000023","ICD9:595.2","NCIT:C27008","SCTID:33655002"],"synonyms":[{"name":"cystitis, chronic","type":"exact"}],"termid":"MONDO:0006030","xrefs":{"Monarch":{"xref_id":"0006030"}}}


id: SO:1000147
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal deletion whereby a translocation occurs in which one of the four broken ends loses a segment before re-joining.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_part","term_name":"deletion","termid":"SO:0000159"},{"relation_name":"is_a","term_name":"chromosomal_deletion","termid":"SO:1000029"},{"relation_name":"is_a","term_name":"chromosomal_translocation","termid":"SO:1000044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deficient_translocation","synonyms":[{"name":"(Drosophila)Df","type":"related"},{"name":"(Drosophila)DfT","type":"related"},{"name":"deficient translocation","type":"exact"}],"termid":"SO:1000147"}


id: PBO:0039967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 10","termid":"PBO:0039967"}


id: MONDO:0100270
data:
  {"annotated_genes":["SJAG_03781"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013951"}]},"cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX19 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0005244","MONDO:0019053","MONDO:0006025"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX19 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX19 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX19 defect","type":"exact"}],"termid":"MONDO:0100270","terms_by_termid":{"MONDO:0013951":null},"xrefs":{"Monarch":{"xref_id":"0100270"}}}


id: PBO:0079214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific serine kinase 6","termid":"PBO:0079214"}


id: PBO:0056659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 26","termid":"PBO:0056659"}


id: PBO:0074256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 2A1","termid":"PBO:0074256"}


id: PBO:0054226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1608","termid":"PBO:0054226"}


id: GO:0006657
data:
  {"annotated_genes":["SJAG_00946","SJAG_01918"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57070,61465],"is_not":false,"summary":null,"term":"GO:0006657"}]},"cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that begins with the phosphorylation of choline and ends with the combination of CDP-choline with diacylglycerol to form phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY3O-450","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00946":null,"SJAG_01918":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"CDP-choline pathway","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000108":null},"synonyms":[{"name":"Kennedy pathway","type":"exact"},{"name":"phosphatidylcholine biosynthesis from choline","type":"exact"}],"termid":"GO:0006657","terms_by_termid":{"GO:0006657":null}}


id: MONDO:0027766
data:
  {"annotated_genes":["SJAG_01957","SJAG_01537","SJAG_00946"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012071"},{"annotations":[85448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010020"},{"annotations":[86464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958023"}]},"cv_name":"mondo","definition":"Almost complete absence of subcutaneous and/or visceral adipose tissue.","definition_xrefs":["NCIT:C131815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipodystrophy","termid":"MONDO:0006573"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00946":null,"SJAG_01537":null,"SJAG_01957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"generalized lipodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0009064","MEDGEN:1369615","UMLS:C4317112","DOID:0080298"],"synonyms":[{"name":"complete generalised lipodystrophy","type":"exact"},{"name":"complete generalized lipodystrophy","type":"exact"}],"termid":"MONDO:0027766","terms_by_termid":{"MONDO:0010020":null,"MONDO:0012071":null,"MONDO:0958023":null},"xrefs":{"Monarch":{"xref_id":"0027766"}}}


id: PBO:0027191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_misfolded_protein_degradation","termid":"PBO:0027191"}


id: PBO:0086095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein potentially involved in regulation of respiratory metabolism; located in the mitochondria; interacts genetically with RPO41 and physically with Coq5p; encoded within the 25S rRNA gene on the opposite strand","termid":"PBO:0086095"}


id: PBO:0085046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential nuclear protein; null mutation has global effects on transcription; VHR2 has a paralog, VHR1, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085046"}


id: PBO:0085188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two mitochondrially-localized peptidyl-tRNA hydrolases; negatively regulates the ubiquitin-proteasome pathway via interactions with ubiquitin-like ubiquitin-associated proteins; dispensable for cell growth; see also PTH1","termid":"PBO:0085188"}


id: PBO:0084278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein, member of the p24 family; forms complex with Erp3p, Erp5p, and Emp24p; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription","termid":"PBO:0084278"}


id: FYPO:0000525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which pexophagy does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal autophagy","termid":"FYPO:0008082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished peroxisome degradation","synonyms":[{"name":"absent pexophagy","type":"exact"},{"name":"peroxisome degradation abolished","type":"exact"},{"name":"pexophagy abolished","type":"exact"},{"name":"pexophagy: absent","type":"related"}],"termid":"FYPO:0000525"}


id: PBO:0042581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine dioxygenase type 1","termid":"PBO:0042581"}


id: PBO:0017750
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta exists predominantly as a dimer of the heterotetramer (Pol3, Cdc1, Cdc27, and Cdm1)","termid":"PBO:0017750"}


id: PBO:0078455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 7 (pseudogene)","termid":"PBO:0078455"}


id: GO:0050592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (Z)-(4-hydroxyphenyl)acetaldehyde oxime + H+ + NADPH + O2 = (S)-4-hydroxymandelonitrile + 2 H2O + NADP+.","definition_xrefs":["RHEA:18401","EC:1.14.14.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-hydroxyphenylacetaldehyde oxime monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R05728","MetaCyc:1.14.13.68-RXN"],"synonyms":[{"name":"(Z)-4-hydroxyphenylacetaldehyde oxime,NADPH:oxygen oxidoreductase activity","type":"related"},{"name":"4-hydroxybenzeneacetaldehyde oxime monooxygenase activity","type":"related"},{"name":"4-hydroxyphenylacetaldehyde oxime,NADPH:oxygen oxidoreductase activity","type":"related"},{"name":"CYP71E1 activity","type":"narrow"},{"name":"NADPH-cytochrome P450 reductase (CYP71E1)","type":"related"},{"name":"cytochrome P450-II-dependent monooxygenase activity","type":"narrow"},{"name":"cytochrome P450II-dependent monooxygenase activity","type":"related"}],"termid":"GO:0050592"}


id: MONDO:0019260
data:
  {"annotated_genes":["SJAG_02518","SJAG_03052"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86786,86785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008083"}]},"cv_name":"mondo","definition":"A genetically heterogeneous group of neuronal ceroid lipofuscinoses (NCLs) with onset during the third decade of life, characterized by dementia, seizures and loss of motor capacities, and sometimes associated with visual loss caused by retinal degeneration.","definition_xrefs":["Orphanet:79262"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis","termid":"MONDO:0016295"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02518":null,"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005559","MONDO:0002039","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"adult neuronal ceroid lipofuscinosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1460031344","NANDO:2201244","SCTID:62009002","GARD:10973","NANDO:1200155","MEDGEN:7230","NORD:1341","UMLS:C0022797"],"synonyms":[{"name":"ANCL","type":"exact"},{"name":"CLN4 disease, adult autosomal dominant","type":"related"},{"name":"Kuf's disease","type":"related"},{"name":"Kufs disease","type":"exact"},{"name":"adult NCL","type":"exact"},{"name":"adult neuronal ceroid lipofuscinosis","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 4","type":"related"},{"name":"neuronal ceroid lipofuscinosis of adults","type":"exact"}],"termid":"MONDO:0019260","terms_by_termid":{"MONDO:0008083":null},"xrefs":{"Monarch":{"xref_id":"0019260"}}}


id: PBO:0044529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled binding antagonist of beta catenin 3","termid":"PBO:0044529"}


id: GO:1903452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of G1 to G0 transition.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:di","PMID:24088570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of G1 to G0 transition","termid":"GO:1903450"},{"relation_name":"positively_regulates","term_name":"G1 to G0 transition","termid":"GO:0070314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of G1 to G0 transition","synonyms":[{"name":"activation of G1 to G0 transition","type":"narrow"},{"name":"activation of G1/G0 transition","type":"narrow"},{"name":"activation of cell cycle quiescence","type":"related"},{"name":"activation of establishment of cell quiescence","type":"narrow"},{"name":"activation of stationary phase","type":"related"},{"name":"positive regulation of G1/G0 transition","type":"exact"},{"name":"positive regulation of cell cycle quiescence","type":"related"},{"name":"positive regulation of establishment of cell quiescence","type":"exact"},{"name":"positive regulation of stationary phase","type":"related"},{"name":"up regulation of G1 to G0 transition","type":"exact"},{"name":"up regulation of G1/G0 transition","type":"exact"},{"name":"up regulation of cell cycle quiescence","type":"related"},{"name":"up regulation of establishment of cell quiescence","type":"exact"},{"name":"up regulation of stationary phase","type":"related"},{"name":"up-regulation of G1 to G0 transition","type":"exact"},{"name":"up-regulation of G1/G0 transition","type":"exact"},{"name":"up-regulation of cell cycle quiescence","type":"related"},{"name":"up-regulation of establishment of cell quiescence","type":"exact"},{"name":"up-regulation of stationary phase","type":"related"},{"name":"upregulation of G1 to G0 transition","type":"exact"},{"name":"upregulation of G1/G0 transition","type":"exact"},{"name":"upregulation of cell cycle quiescence","type":"related"},{"name":"upregulation of establishment of cell quiescence","type":"exact"},{"name":"upregulation of stationary phase","type":"related"}],"termid":"GO:1903452"}


id: PBO:0052594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 2 pseudogene 3","termid":"PBO:0052594"}


id: MONDO:0006983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon neurovascular condition seen with exertion of the upper extremity. It is usually caused by atherosclerotic stenosis or occlusion of the subclavian artery proximal to the origin of the vertebral artery. In order to maintain adequate perfusion of the arm during exercise on the affected side, the narrowed subclavian artery siphons off retrograde blood flow from the ipsilateral vertebral artery. This is possible due to lower blood pressure distal to the site of narrowing and collateral circulation through the circle of Willis. Affected individuals may remain asymptomatic until the oxygen demand generated from upper extremity exercise requires a large enough compensatory volume of blood to be diverted from the vertebral artery to provoke vertebrobasilar insufficiency and its accompanying neurological sequelae. Presenting clinical signs may include pain or numbness of the affected arm (with diminished pulses and a brachial systolic blood pressure differential of greater than 20 mmHg as compared to the opposite arm), vertigo, tinnitus, dysarthria, diplopia and syncope. Notably, unlike cerebral infarction, the clinical course does not lead to chronic neurologic disability. Prognosis for recovery of normal anterograde circulation is favorable following endovascular or surgical intervention.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subclavian steal syndrome","secondary_identifiers":["MESH:D013349","MEDGEN:20983","NCIT:C35044","UMLS:C0038531","MedDRA:10042335","icd11.foundation:2123391417","DOID:13002","ICD9:435.2","SCTID:15258001"],"synonyms":[{"name":"subclavian artery stenosis","type":"exact"},{"name":"subclavian steal phenomenon","type":"exact"},{"name":"subclavian steal steno-occlusive disease","type":"exact"}],"termid":"MONDO:0006983","xrefs":{"Monarch":{"xref_id":"0006983"}}}


id: PBO:0088342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A scaffold subunit Paa1","termid":"PBO:0088342"}


id: GO:1990926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which synaptic transmission, induced by the arrival of a spike (action potential) at a synapse, acts to increase the amount of neurotransmitter released in response to the arrival of subsequent spikes. This effect is seen when a train of closely space spikes arrives at a synapse with a low initial release probability. It occurs in a timeframe of tens to hundreds of milliseconds.","definition_xrefs":["GOC:dos","PMID:11826273","GOC:sp","PMID:26738595","ISBN:9780071120005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"short-term synaptic potentiation","synonyms":[{"name":"synaptic facilitation","type":"exact"}],"termid":"GO:1990926"}


id: FYPO:0000934
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the microtubule cytoskeleton does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"},{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"abolished protein localisation to microtubule cytoskeleton during vegetative growth","type":"exact"},{"name":"abolished protein localization to microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"protein absent from microtubule cytoskeleton during vegetative growth","type":"related"},{"name":"protein localization to microtubule cytoskeleton abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000934"}


id: GO:1902167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.","definition_xrefs":["PMID:17719541","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:1902165"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902231"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902255"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:0042771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","synonyms":[{"name":"activation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"activation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"narrow"},{"name":"positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"up regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"up-regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"upregulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"}],"termid":"GO:1902167"}


id: PBO:0075494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 32","termid":"PBO:0075494"}


id: FYPO:0004877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) is decreased at specific genes that are transcriptionally up-regulated during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased chromatin binding at mitotically up-regulated genes","synonyms":[{"name":"decreased chromatin binding at mitotically upregulated gene","type":"exact"},{"name":"reduced chromatin binding at mitotically up-regulated genes","type":"exact"}],"termid":"FYPO:0004877"}


id: RO:0002551
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a segment or subdivision of an organism and the maximal subdivision of material entities that provides structural support for that segment or subdivision.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_skeleton","termid":"RO:0002551"}


id: PBO:0084771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial nuclease functioning in DNA repair and replication; modulates the stability of the mitochondrial genome, induced by exposure to mutagens, also induced during meiosis at a time nearly coincident with commitment to recombination; DIN7 has a paralog, EXO1, that arose from the whole genome duplication","termid":"PBO:0084771"}


id: GO:0036181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein localization process in which a protein is transported to, or maintained at, a linear element. A linear element is a proteinaceous scaffold associated with S. pombe chromosomes during meiotic prophase.","definition_xrefs":["GOC:mah","PMID:19756689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to condensed nuclear chromosome","termid":"GO:1903084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to linear element","synonyms":[{"name":"protein localisation to linear element","type":"exact"}],"termid":"GO:0036181"}


id: GO:0043038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an amino acid to an active form, for incorporation into a peptide, protein or other macromolecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520"],"is_obsolete":false,"name":"amino acid activation","termid":"GO:0043038"}


id: PBO:0081835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 770","termid":"PBO:0081835"}


id: PBO:0039843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP11A-SCG5 readthrough","termid":"PBO:0039843"}


id: PBO:0051702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase B","termid":"PBO:0051702"}


id: MONDO:0018315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"osteoporosis","termid":"MONDO:0005298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"X-linked osteoporosis with fractures","secondary_identifiers":["Orphanet:391330","MEDGEN:1674557","UMLS:C5190610","GARD:17614"],"termid":"MONDO:0018315","xrefs":{"Monarch":{"xref_id":"0018315"}}}


id: FYPO:0000031
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00993:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00993","name":"byr1delta","uniquename":"SJAG_00993:allele-1"},"SJAG_01718:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01718","name":"byr2delta","uniquename":"SJAG_01718:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02379:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02379","name":"gap1delta","uniquename":"SJAG_02379:allele-1"},"SJAG_02486:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02486","name":"ste6delta","uniquename":"SJAG_02486:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02923:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02923","name":"spk1delta","uniquename":"SJAG_02923:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_04009:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04009","name":"ste11delta","uniquename":"SJAG_04009:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119833,119399,119835,119817,119819,119809,119814,119810,119820,119803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000280"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation is abnormal. Conjugation, also known as mating, is a process that results in the union of cellular and genetic information from cells of compatible mating types.","definition_xrefs":["GO:0000747","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating phenotype","termid":"FYPO:0000301"},{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_00993":null,"SJAG_01718":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_02486":null,"SJAG_02592":null,"SJAG_02923":null,"SJAG_03453":null,"SJAG_04009":null},"genotype_count":10,"genotypes_by_uniquename":{"byr1delta":{"display_name":"byr1delta","display_uniquename":"byr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00993:allele-1","expression":"Null"}]}]},"byr2delta":{"display_name":"byr2delta","display_uniquename":"byr2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01718:allele-1","expression":"Null"}]}]},"gap1delta":{"display_name":"gap1delta","display_uniquename":"gap1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02379:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"spk1delta":{"display_name":"spk1delta","display_uniquename":"spk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02923:allele-1","expression":"Null"}]}]},"ste11delta":{"display_name":"ste11delta","display_uniquename":"ste11delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04009:allele-1","expression":"Null"}]}]},"ste6delta":{"display_name":"ste6delta","display_uniquename":"ste6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02486:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mating","references_by_uniquename":{"PMID:29566183":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00993","SJAG_02379","SJAG_02923","SJAG_01718","SJAG_00514","SJAG_04009","SJAG_01794","SJAG_02486","SJAG_03453"],"single_locus_genotype_uniquenames":["byr1delta","scd1delta","spk1delta","ste6delta","sty1delta","gap1delta","ste11delta","byr2delta","scd2delta","ras1delta"],"synonyms":[{"name":"abnormal conjugation","type":"exact"},{"name":"abnormal conjugation with cellular fusion","type":"exact"},{"name":"abnormal zygote formation","type":"related"},{"name":"conjugation defects","type":"exact"}],"termid":"FYPO:0000031","terms_by_termid":{"FYECO:0000272":null,"FYPO:0000280":null,"FYPO_EXT:0000001":null}}


id: MONDO:0004702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The presence of whitish patches on the mucosal surface of the cervix. Histologic examination reveals hyperkeratosis. In a minority of cases, underlying dysplasia or carcinoma in situ is present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"},{"relation_name":"is_a","term_name":"leukoplakia","termid":"MONDO:0043243"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine cervix leukoplakia","secondary_identifiers":["ICD9:622.2","MEDGEN:124350","NCIT:C3976","UMLS:C0269194","ICD10CM:N88.0","SCTID:50923006","DOID:9043"],"synonyms":[{"name":"cervical leukoplakia","type":"exact"},{"name":"cervix leukoplakia","type":"exact"},{"name":"cervix uteri leukoplakia","type":"exact"},{"name":"leukoplakia of cervix","type":"exact"},{"name":"leukoplakia of cervix (uteri)","type":"exact"},{"name":"leukoplakia of cervix uteri","type":"exact"},{"name":"leukoplakia of the cervix","type":"exact"},{"name":"leukoplakia of the cervix uteri","type":"exact"},{"name":"leukoplakia of the uterine cervix","type":"exact"},{"name":"leukoplakia of uterine cervix","type":"exact"}],"termid":"MONDO:0004702","xrefs":{"Monarch":{"xref_id":"0004702"}}}


id: MONDO:0026771
data:
  {"annotated_genes":["SJAG_01831"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86247],"is_not":false,"summary":null,"term":"MONDO:0026771"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01831":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 85, with or without midline brain defects","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:301044","DOID:0070380","MEDGEN:1708832","UMLS:C5393312"],"synonyms":[{"name":"DEE85, with or without midline brain defects","type":"exact"},{"name":"EIEE85","type":"exact"},{"name":"developmental and epileptic encephalopathy 85, with or without midline brain defects, X-linked dominant","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 85, with or without midline brain defects","type":"exact"}],"termid":"MONDO:0026771","terms_by_termid":{"MONDO:0026771":null},"xrefs":{"Monarch":{"xref_id":"0026771"}}}


id: PBO:0065086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit beta 1","termid":"PBO:0065086"}


id: MONDO:0008886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sabinas brittle hair syndrome","secondary_identifiers":["UMLS:C0796271","DOID:0111874","MEDGEN:163238","icd11.foundation:1722502589","OMIM:211390","MESH:C536320","Orphanet:3123"],"synonyms":[{"name":"Sabinas brittle hair syndrome","type":"exact"},{"name":"Sabinas syndrome","type":"related"},{"name":"brittle hair and mental Deficit","type":"related"},{"name":"brittle hair syndrome, Sabinas type","type":"exact"}],"termid":"MONDO:0008886","xrefs":{"Monarch":{"xref_id":"0008886"}}}


id: PBO:0088118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar carboxypeptidase Y (proteinase C, CPY); broad-specificity C-terminal exopeptidase involved in non-specific protein degradation in the vacuole; involved, along with functional homolog Prc1p, in vacuolar zymogen activation, breakdown of the autophagic body, and autophagosome-dependent protein synthesis; role in phytochelatin synthesis; localizes to the vacuole lumen; member of the serine carboxypeptidase family; N-glycosylated","termid":"PBO:0088118"}


id: MONDO:0032903
data:
  {"annotated_genes":["SJAG_00875"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87045],"is_not":false,"summary":null,"term":"MONDO:0032903"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00875":null},"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita 4, neurogenic, with agenesis of the corpus callosum","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618766","DOID:0080980","MEDGEN:1684706","UMLS:C5231494"],"synonyms":[{"name":"AMCNACC","type":"exact"},{"name":"Zain Syndrome","type":"related"},{"name":"arthrogryposis multiplex congenita, neurogenic, with agenesis of the corpus callosum","type":"exact"}],"termid":"MONDO:0032903","terms_by_termid":{"MONDO:0032903":null},"xrefs":{"Monarch":{"xref_id":"0032903"}}}


id: PBO:0089528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNA associated protein Dip2","termid":"PBO:0089528"}


id: GO:0008843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of nonterminal (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins. Typically, endochitinases cleave randomly within the chitin chain.","definition_xrefs":["EC:3.2.1.14","GOC:kah","GOC:pde","PMID:11468293","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitinase activity","termid":"GO:0004568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"endochitinase activity","secondary_identifiers":["MetaCyc:3.2.1.14-RXN"],"synonyms":[{"name":"1,4-beta-poly-N-acetylglucosaminidase","type":"exact"},{"name":"chitinase","type":"exact"},{"name":"chitodextrinase","type":"exact"},{"name":"poly-beta-glucosaminidase","type":"exact"}],"termid":"GO:0008843"}


id: FYPO:0007638
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the anisotropic movement of chromatin occurs to a lower extent than normal during mitosis. Normally, chromatin moves to a lesser extent, and with less freedom of movement direction (i.e. more anisotropically), during mitosis than during interphase.","definition_xrefs":["PomBase:mah","PMID:33434270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin mobility","termid":"FYPO:0007637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"decreased anisotropic motion of mitotic chromatin","synonyms":[{"name":"decreased anisotropic chromatin motion during mitosis","type":"exact"},{"name":"decreased anisotropic chromatin motion during mitotic M phase","type":"related"},{"name":"decreased anisotropic chromatin movement during mitosis","type":"exact"},{"name":"decreased anisotropic mitotic chromatin mobility","type":"exact"},{"name":"decreased anisotropic mitotic chromatin motion","type":"exact"},{"name":"decreased anisotropic motion of mitotic chromatin during vegetative growth","type":"exact"},{"name":"decreased anisotropic movement of mitotic chromatin","type":"exact"},{"name":"reduced anisotropic motion of mitotic chromatin","type":"exact"}],"termid":"FYPO:0007638"}


id: PBO:0031641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_shmoo_formation","termid":"PBO:0031641"}


id: GO:1903435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of constitutive secretory pathway.","definition_xrefs":["GO_REF:0000058","GOC:als","GOC:TermGenie","PMID:22899725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of exocytosis","termid":"GO:0045921"},{"relation_name":"is_a","term_name":"regulation of constitutive secretory pathway","termid":"GO:1903433"},{"relation_name":"positively_regulates","term_name":"constitutive secretory pathway","termid":"GO:0045054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"positive regulation of constitutive secretory pathway","synonyms":[{"name":"activation of constitutive secretory pathway","type":"narrow"},{"name":"up regulation of constitutive secretory pathway","type":"exact"},{"name":"up-regulation of constitutive secretory pathway","type":"exact"},{"name":"upregulation of constitutive secretory pathway","type":"exact"}],"termid":"GO:1903435"}


id: MONDO:0001258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"vertebral column disorder","termid":"MONDO:0000812"},{"relation_name":"is_a","term_name":"occlusion precerebral artery","termid":"MONDO:0003718"},{"relation_name":"is_a","term_name":"arterial occlusion","termid":"MONDO:0020673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebral artery occlusion","secondary_identifiers":["ICD9:433.20","ICD9:433.21","SCTID:195182007","MEDGEN:539080","ICD9:433.2","ICD10CM:I65.0","UMLS:C0265104","DOID:11299"],"synonyms":[{"name":"occlusion and stenosis of vertebral artery","type":"exact"},{"name":"vertebral artery occlusion","type":"exact"},{"name":"vertebrobasial artery occlusion","type":"related"}],"termid":"MONDO:0001258","xrefs":{"Monarch":{"xref_id":"0001258"}}}


id: MONDO:0010329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 77","secondary_identifiers":["OMIM:300454","MESH:C564511","UMLS:C1845499","GARD:22678","MEDGEN:335199","DOID:0112039"],"synonyms":[{"name":"MRX77","type":"exact"},{"name":"intellectual disability, X-linked 77","type":"exact"},{"name":"mental retardation, X-linked 77","type":"related"},{"name":"mental retardation, X-linked 77, X-linked recessive","type":"exact"}],"termid":"MONDO:0010329","xrefs":{"Monarch":{"xref_id":"0010329"}}}


id: MONDO:0002422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade malignant neoplasm arising from the long bones. The tibia is the most frequently affected bone site. Patients present with swelling which may or may not be associated with pain. Morphologically, it is characterized by a biphasic pattern consisting of an epithelial and an osteofibrous component. The vast majority of cases recur if they are not treated with radical surgery. In a minority of cases the tumor may metastasize to other anatomic sites including lymph nodes, lungs, liver, brain, and skeleton.","definition_xrefs":["NCIT:C7644"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited syndrome with bone tumors as a major feature (obsolete MONDO:0015959)","termid":"MONDO:0015959"},{"relation_name":"is_a","term_name":"bone carcinoma","termid":"MONDO:0002415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adamantinoma","secondary_identifiers":["DOID:2776","MESH:D050398","Orphanet:55881","DOID:2775","MEDGEN:83163","icd11.foundation:2013322169","OMIM:102660","ICD9:170.9","MESH:C562741","ICD10CM:C40.2","ICDO:9261/3","GARD:16660","ONCOTREE:ADMA","SCTID:307609003","UMLS:C0334556"],"synonyms":[{"name":"Extragnathic adamantinoma","type":"exact"},{"name":"adamantinoma","type":"exact"},{"name":"adamantinoma of long bone","type":"related"},{"name":"adamantinoma of long bones","type":"exact"},{"name":"adamantinoma of long bones (morphologic abnormality)","type":"exact"},{"name":"adamantinoma, malignant","type":"exact"},{"name":"long bone adamantinoma","type":"exact"}],"termid":"MONDO:0002422","xrefs":{"Monarch":{"xref_id":"0002422"}}}


id: GO:0102146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tricetin + S-adenosyl-L-methionine = H+ + 3'-O-methyltricetin + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","RHEA:27493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tricetin O-methytransferase activity","secondary_identifiers":["MetaCyc:RXN-11582"],"termid":"GO:0102146"}


id: PBO:0026860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_chromosome_arm_condensation","termid":"PBO:0026860"}


id: GO:1904435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transferrin receptor binding.","definition_xrefs":["PMID:18353247","GO_REF:0000059","GOC:BHF","GOC:kom","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transferrin receptor binding (obsolete GO:1904435)","termid":"GO:1904435"}


id: GO:0031067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the removal of acetyl groups to histones in centromeric DNA.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deacetylation at centromere (obsolete GO:0031067)","synonyms":[{"name":"down regulation of histone deacetylation at centromere","type":"exact"},{"name":"down-regulation of histone deacetylation at centromere","type":"exact"},{"name":"downregulation of histone deacetylation at centromere","type":"exact"},{"name":"inhibition of histone deacetylation at centromere","type":"narrow"}],"termid":"GO:0031067"}


id: PR:Q9UU83
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pal1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pal1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.04c","synonyms":[{"name":"Spom972h-pal1","type":"exact"},{"name":"pears and lemons protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU83"}


id: PBO:0080588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 12","termid":"PBO:0080588"}


id: GO:0035942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of dehydroepiandrosterone (3beta-hydroxyandrost-5-en-17-one) into the circulatory system.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"dehydroepiandrosterone secretion","synonyms":[{"name":"3beta-hydroxyandrost-5-en-17-one secretion","type":"exact"},{"name":"DHEA secretion","type":"exact"},{"name":"dehydroisoandrosterone secretion","type":"exact"}],"termid":"GO:0035942"}


id: PBO:0052405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 5B","termid":"PBO:0052405"}


id: MONDO:0005382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of bone that initially results in the excessive resorption of bone (by osteoclasts) followed by the replacement of normal bone marrow with vascular and fibrous tissue.","definition_xrefs":["NCIT:C3292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"metabolic bone disorder","termid":"MONDO:0800486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone Paget disease","secondary_identifiers":["OMIMPS:167250","Orphanet:280110","EFO:0004261","SCTID:2089002","DOID:5408","UMLS:C0029401","MEDGEN:10493"],"synonyms":[{"name":"Paget disease of bone","type":"exact"},{"name":"Paget's bone disease","type":"exact"},{"name":"Paget's disease","type":"related"},{"name":"Paget's disease of bone","type":"exact"},{"name":"Paget's disease of the bone","type":"exact"},{"name":"Pagets disease (bone)","type":"exact"},{"name":"bone Paget disease","type":"exact"},{"name":"bone Paget's disease","type":"exact"},{"name":"familial Paget's disease of bone","type":"related"},{"name":"osseous Paget's disease","type":"exact"},{"name":"osteitis deformans","type":"exact"}],"termid":"MONDO:0005382","xrefs":{"Monarch":{"xref_id":"0005382"}}}


id: GO:0003112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of epinephrine from nerve endings increases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart rate by epinephrine","termid":"GO:0003065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by neuronal epinephrine","synonyms":[{"name":"positive regulation of heart rate by neuronal adrenaline","type":"exact"}],"termid":"GO:0003112"}


id: MONDO:1010088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatomyositis characterized by the presence of anti-SAE autoantibodies.","definition_xrefs":["PMID:31279808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatomyositis","termid":"MONDO:0016367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005336"],"is_obsolete":false,"name":"anti-SAE dermatomyositis","synonyms":[{"name":"anti-small ubiquitin-like modifier activating enzyme dermatomyositis","type":"exact"}],"termid":"MONDO:1010088","xrefs":{"Monarch":{"xref_id":"1010088"}}}


id: PBO:0063915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta","termid":"PBO:0063915"}


id: GO:0042016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-20 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-20 receptor activity","synonyms":[{"name":"IL-20 receptor activity","type":"exact"},{"name":"IL-20R","type":"exact"}],"termid":"GO:0042016"}


id: PBO:0117373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial oxaloacetate tautomerase involved in metabolite repair Oaa1","termid":"PBO:0117373"}


id: PBO:0003751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST1 family protein (predicted)","termid":"PBO:0003751"}


id: PBO:0078855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 3","termid":"PBO:0078855"}


id: GO:0032847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a process that reduces the internal pH of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"is_a","term_name":"regulation of intracellular pH","termid":"GO:0051453"},{"relation_name":"regulates","term_name":"intracellular pH reduction","termid":"GO:0051452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular pH reduction","synonyms":[{"name":"regulation of cell pH reduction","type":"exact"},{"name":"regulation of cellular acidification","type":"exact"},{"name":"regulation of intracellular acidification","type":"related"},{"name":"regulation of intracellular pH reduction","type":"exact"},{"name":"regulation of reduction of cellular pH","type":"exact"},{"name":"regulation of reduction of pH in cell","type":"exact"}],"termid":"GO:0032847"}


id: MONDO:0002317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An illusion of movement, either of the external world revolving around the individual or of the individual revolving in space. Vertigo may be associated with disorders of the inner ear (ear, inner); vestibular nerve; brainstem; or cerebral cortex. Lesions in the temporal lobe and parietal lobe may be associated with focal seizures that may feature vertigo as an ictal manifestation. (From Adams et al., Principles of Neurology, 6th ed, pp300-1)","definition_xrefs":["MESH:D014717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system origin vertigo","secondary_identifiers":["MEDGEN:56365","SCTID:38403006","UMLS:C0155503","DOID:2479","ICD9:386.2"],"synonyms":[{"name":"central vestibular vertigo","type":"exact"},{"name":"vertigo of central origin","type":"exact"}],"termid":"MONDO:0002317","xrefs":{"Monarch":{"xref_id":"0002317"}}}


id: PBO:0057093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 190a","termid":"PBO:0057093"}


id: PBO:0063706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 1","termid":"PBO:0063706"}


id: MONDO:1010574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, dog","secondary_identifiers":["OMIA:000279-9615"],"termid":"MONDO:1010574","xrefs":{"Monarch":{"xref_id":"1010574"}}}


id: MONDO:0030042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteinuria, chronic benign","secondary_identifiers":["MEDGEN:1714078","UMLS:C5394384","OMIM:618884"],"synonyms":[{"name":"PROCHOB","type":"exact"},{"name":"PROTEINURIA, CHRONIC BENIGN","type":"exact"},{"name":"proteinuria, chronic benign","type":"exact"}],"termid":"MONDO:0030042","xrefs":{"Monarch":{"xref_id":"0030042"}}}


id: MONDO:0019149
data:
  {"annotated_genes":["SJAG_04790","SJAG_00158","SJAG_02068"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85686,85687,85688],"is_not":false,"summary":null,"term":"MONDO:0019149"}]},"cv_name":"mondo","definition":"A form of lysosomal acid lipase deficiency characterized by progressive cholesterol esters and triglyceride accumulation in tissues and organs typically presenting with hepatosplenomegaly, liver dysfunction and/or dyslipidemia.","definition_xrefs":["Orphanet:75234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal acid lipase deficiency","termid":"MONDO:0800449"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_02068":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"cholesteryl ester storage disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:57218003","GARD:12099","icd11.foundation:894336362","MEDGEN:40266","DOID:14502","NANDO:1200144","NANDO:2201233","OMIM:278000","NORD:929","UMLS:C0008384"],"synonyms":[{"name":"CESD","type":"related"},{"name":"LAL deficiency, partial","type":"exact"},{"name":"LIPA deficiency, partial","type":"exact"},{"name":"cholesterol ester hydrolase deficiency, partial","type":"exact"},{"name":"cholesterol ester storage disease","type":"exact"},{"name":"lysosomal acid lipase deficiency, partial","type":"exact"},{"name":"lysosomal and lipase deficiency","type":"related"}],"termid":"MONDO:0019149","terms_by_termid":{"MONDO:0019149":null},"xrefs":{"Monarch":{"xref_id":"0019149"}}}


id: PR:000024855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteolytic cleavage product that is derived from P-factor precursor. In Schizosaccharomyces pombe 972h- the sequence is TYADFLRAYQSWNTFVNPDRPNL, corresponding to amino acids 66-88 or 134-156 of UniProtKB:Q09180-1.","definition_xrefs":["PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"map2/Clv:P-factor","pombase_gene_id":"SPCC1795.06","synonyms":[{"name":"PomBase_original_PRO_term_name: P-factor","type":"exact"},{"name":"map2/Clv:P-factor","type":"exact"}],"termid":"PR:000024855"}


id: MONDO:0023182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Beckwith-Wiedemann syndrome","termid":"MONDO:0007534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Franceschini Vardeu Guala syndrome","secondary_identifiers":["MEDGEN:419814","GARD:2371","MESH:C537272","UMLS:C2931463"],"termid":"MONDO:0023182","xrefs":{"Monarch":{"xref_id":"0023182"}}}


id: PBO:0055832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and fibronectin type III domain containing 2","termid":"PBO:0055832"}


id: GO:0006654
data:
  {"annotated_genes":["SJAG_01519","SJAG_04323","SJAG_01036","SJAG_01957","SJAG_04319","SJAG_04883","SJAG_02654"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62421,71417,71880,72016,78124,93401,105207],"is_not":false,"summary":null,"term":"GO:0006654"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidic acid, any derivative of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidic acid metabolic process","termid":"GO:0046473"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_01519":null,"SJAG_01957":null,"SJAG_02654":null,"SJAG_04319":null,"SJAG_04323":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483166"],"synonyms":[{"name":"phosphatidic acid anabolism","type":"exact"},{"name":"phosphatidic acid biosynthesis","type":"exact"},{"name":"phosphatidic acid formation","type":"exact"},{"name":"phosphatidic acid synthesis","type":"exact"}],"termid":"GO:0006654","terms_by_termid":{"GO:0006654":null}}


id: FYPO:0006198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, has two nuclei, and has normal length but a greater diameter than normal.","definition_xrefs":["PomBase:mah","PMID:20805322"],"direct_ancestors":[{"relation_name":"has_part","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"has_part","term_name":"normal vegetative cell length","termid":"FYPO:0003503"},{"relation_name":"is_a","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"normal vegetative cell length","termid":"FYPO:0003503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0001985","FYPO:0000257","FYPO:0000002","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"inviable binucleate vegetative cell, with normal cell length and increased cell diameter","synonyms":[{"name":"inviable binucleate cell, with normal cell length and increased cell diameter, during vegetative growth","type":"exact"},{"name":"inviable binucleate vegetative cell, with increased cell diameter and normal cell length","type":"exact"},{"name":"inviable binucleate vegetative cell, with normal cell length and increased cell diameter during mitotic cell cycle","type":"related"},{"name":"inviable binucleate vegetative cell, with normal length and increased diameter","type":"exact"},{"name":"inviable swollen binucleate vegetative cell, with normal cell length","type":"related"},{"name":"lethal; binucleate vegetative cell, with normal cell length and increased cell diameter","type":"exact"}],"termid":"FYPO:0006198"}


id: MONDO:0018715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma present and fully formed at birth. The different types are Rapidly involuting congenital hemangiomas (RICH), Partially involuting congenital hemangioma (PICH) and Non-involuting congenital hemangiomas (NICH).","definition_xrefs":["NCIT:C3841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hemangioma","secondary_identifiers":["Orphanet:458775","SCTID:32361000119104","UMLS:C0235753","GARD:21910","MEDGEN:65912"],"synonyms":[{"name":"congenital angioma","type":"related"},{"name":"congenital hemangioma","type":"exact"}],"termid":"MONDO:0018715","xrefs":{"Monarch":{"xref_id":"0018715"}}}


id: MONDO:1010051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes insipidus, non-human animal","secondary_identifiers":["OMIA:000278"],"termid":"MONDO:1010051","xrefs":{"Monarch":{"xref_id":"1010051"}}}


id: GO:0042803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an identical protein to form a homodimer.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"identical protein binding","termid":"GO:0042802"},{"relation_name":"is_a","term_name":"protein dimerization activity","termid":"GO:0046983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"protein homodimerization activity","synonyms":[{"name":"dimerization activity","type":"broad"}],"termid":"GO:0042803"}


id: MONDO:1010293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anodontia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"mouth disorder, non-human animal","termid":"MONDO:1011333"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anodontia, non-human animal","secondary_identifiers":["OMIA:000048"],"termid":"MONDO:1010293","xrefs":{"Monarch":{"xref_id":"1010293"}}}


id: GO:0042817
data:
  {"annotated_genes":["SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-hydroxy-5-(hydroxymethyl)-2-methyl-4-pyridinecarboxaldehyde, one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:jl","PMID:21767669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"pyridoxal metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxal metabolism","type":"exact"}],"termid":"GO:0042817","terms_by_termid":{"GO:0042821":null}}


id: GO:0080059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-arabinose + a flavonol = UDP + a flavonol 3-O-D-arabinoside.","definition_xrefs":["PMID:18757557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"arabinosyltransferase activity","termid":"GO:0052636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"flavonol 3-O-arabinosyltransferase activity","termid":"GO:0080059"}


id: PBO:0081140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP37 zinc finger protein","termid":"PBO:0081140"}


id: MOD:00819
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-2-aminobutanoic acid.","definition_xrefs":["RESID:AA0409","ChEBI:35619","DeltaMass:0","PubMed:11740505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-aminobutanoic acid (Glu)","synonyms":[{"name":"(S)-2-aminobutanoic acid","type":"exact"},{"name":"Abu","type":"exact"},{"name":"L-2-amino-n-butyric acid","type":"exact"},{"name":"L-2-aminobutanoic acid","type":"exact"},{"name":"L-2-aminobutyric acid","type":"exact"},{"name":"L-alpha-amino-n-butyric acid","type":"exact"},{"name":"L-alpha-aminobutyric acid","type":"exact"},{"name":"L-butyrine","type":"exact"},{"name":"alpha-amino-n-butyric acid","type":"exact"},{"name":"alpha-aminobutyric acid","type":"exact"},{"name":"butyrine","type":"exact"},{"name":"dCbxGlu","type":"exact"}],"termid":"MOD:00819"}


id: MONDO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pupil disorder","termid":"MONDO:0002285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"abnormal pupillary function","secondary_identifiers":["ICD9:379.49","ICD9:379.40","DOID:11518","HP:0007686","MEDGEN:214629","SCTID:72124005","UMLS:C0917967"],"synonyms":[{"name":"abnormal pupillary function","type":"exact"},{"name":"abnormal pupillary function (disease)","type":"exact"}],"termid":"MONDO:0001303","xrefs":{"Monarch":{"xref_id":"0001303"}}}


id: PBO:0078233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 15","termid":"PBO:0078233"}


id: MONDO:0022857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete continuous muscle fiber activity hereditary (obsolete MONDO:0022857)","termid":"MONDO:0022857","xrefs":{"Monarch":{"xref_id":"0022857"}}}


id: GO:0052818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: heteroglycan + GDP-mannose = (1->3)-alpha-D-mannosylheteroglycan + GDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete heteroglycan 3-alpha-mannosyltransferase activity (obsolete GO:0052818)","synonyms":[{"name":"heteropolysaccharide 3-alpha-mannosyltransferase activity","type":"exact"}],"termid":"GO:0052818"}


id: MONDO:0016878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 16 disorder","termid":"MONDO:0700023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 16","secondary_identifiers":["GARD:20801","UMLS:C5679657","Orphanet:261826","MEDGEN:1826015"],"synonyms":[{"name":"partial deletion of chromosome type 16","type":"exact"},{"name":"partial monosomy of chromosome 16","type":"exact"}],"termid":"MONDO:0016878","xrefs":{"Monarch":{"xref_id":"0016878"}}}


id: FYPO:0004561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of BE49385A (a GPI synthesis inhibitor, also called YW3548) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to BE49385A","synonyms":[{"name":"resistance to BE49385A during mitotic cell cycle","type":"related"},{"name":"resistance to BE49385A during vegetative growth","type":"exact"},{"name":"resistance to YW3548","type":"exact"},{"name":"resistant to BE49385A","type":"exact"}],"termid":"FYPO:0004561"}


id: PR:O94375
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rex4 gene.","definition_xrefs":["UniProtKB:O94375","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.09c","synonyms":[{"name":"Spom972h-rex4","type":"exact"}],"termid":"PR:O94375"}


id: GO:0047204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucarate + chlorogenate = (-)-quinate + 2-O-caffeoylglucarate.","definition_xrefs":["EC:2.3.1.98","RHEA:23204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"chlorogenate-glucarate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02998","MetaCyc:2.3.1.98-RXN"],"synonyms":[{"name":"chlorogenate:glucarate O-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"chlorogenate:glucarate caffeoyltransferase activity","type":"related"},{"name":"chlorogenic acid:glucaric acid O-caffeoyltransferase activity","type":"related"}],"termid":"GO:0047204"}


id: PBO:0001951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Ace2","termid":"PBO:0001951"}


id: PBO:0045099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal membrane arm assembly component 1","termid":"PBO:0045099"}


id: PBO:0090369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi coiled-coil protein Tmf1","termid":"PBO:0090369"}


id: PBO:0043103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 15","termid":"PBO:0043103"}


id: PBO:0092025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S3","termid":"PBO:0092025"}


id: PBO:0090445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps54","termid":"PBO:0090445"}


id: PBO:0000970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium/calcium exchanger (predicted)","termid":"PBO:0000970"}


id: GO:0047910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose + NADP+ = D-galactonolactone + NADPH.","definition_xrefs":["MetaCyc:GALACTOSE-1-DEHYDROGENASE-NADP+-RXN","EC:1.1.1.120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"galactose 1-dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:18625"],"synonyms":[{"name":"D-galactose dehydrogenase (NADP+)","type":"related"},{"name":"D-galactose:NADP+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047910"}


id: PBO:0083399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF ULP2/YIL031W","termid":"PBO:0083399"}


id: PBO:0054789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2202","termid":"PBO:0054789"}


id: FYPO:0005020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of actomyosin contractile ring contraction is normal (i.e. indistinguishable from wild type). Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["PomBase:mah","GO:1902404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actomyosin contractile ring contraction","termid":"FYPO:0004097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal duration of actomyosin contractile ring contraction","synonyms":[{"name":"normal duration of actomyosin contractile ring constriction","type":"exact"},{"name":"normal duration of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"normal duration of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"normal duration of contractile ring contraction","type":"exact"},{"name":"normal duration of cytokinetic contractile ring contraction","type":"exact"},{"name":"normal duration of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"normal duration of mitotic contractile ring contraction","type":"exact"}],"termid":"FYPO:0005020"}


id: MONDO:0010770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-activating enzyme, Y-linked","secondary_identifiers":["MEDGEN:326389","UMLS:C1839046","OMIM:489000"],"synonyms":[{"name":"Ube1Y","type":"related"},{"name":"ubiquitin-activating enzyme, Y-linked","type":"exact"}],"termid":"MONDO:0010770","xrefs":{"Monarch":{"xref_id":"0010770"}}}


id: PATO:0001768
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a bearer or a population by virtue of some of it's members' inability to survive to reproduce.","definition_xrefs":["PATOC:CVC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-lethal (sensu genetics)","termid":"PATO:0001768"}


id: GO:0100016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates thiamine biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of thiamine biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100016)","termid":"GO:0100016"}


id: GO:0106213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which outer kinetochore components delocalize from the centromere, contributing to the rearrangement of chromosomes into the orientation characteristic of meiotic prophase I.","definition_xrefs":["GOC:mah","PMID:27611693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"kinetochore disassembly involved in meiotic chromosome organization","synonyms":[{"name":"kinetochore disassembly from spindle pole body involved in chromosome organization involved in meiotic cell cycle","type":"exact"}],"termid":"GO:0106213"}


id: PBO:0080408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS37B subunit of ESCRT-I","termid":"PBO:0080408"}


id: MONDO:0013614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertelorism-preauricular sinus-punctual pits-deafness syndrome","secondary_identifiers":["UMLS:C4751125","MEDGEN:1659106","OMIM:614187","GARD:17351","Orphanet:293958"],"synonyms":[{"name":"HPPD","type":"exact"},{"name":"hypertelorism, preauricular sinus, punctal pits, and deafness","type":"related"},{"name":"hypertelorism-preauricular sinus-punctual pits-hearing loss syndrome","type":"exact"}],"termid":"MONDO:0013614","xrefs":{"Monarch":{"xref_id":"0013614"}}}


id: GO:0005133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type II interferon receptor. Type II interferon is also known as interferon-gamma.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type II interferon receptor binding","synonyms":[{"name":"interferon-gamma","type":"narrow"},{"name":"interferon-gamma receptor binding","type":"exact"},{"name":"interferon-gamma receptor ligand","type":"narrow"}],"termid":"GO:0005133"}


id: GO:0021692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cerebellar Purkinje cell layer is generated and organized. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:cls","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer development","termid":"GO:0021680"},{"relation_name":"part_of","term_name":"cerebellar cortex morphogenesis","termid":"GO:0021696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer morphogenesis","termid":"GO:0021692"}


id: PBO:0084912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic exit network (MEN) scaffold protein; core component of the SPB outer plaque that functions in astral microtubule organization via Spc72p; scaffold for recruitment of MEN components, such as Cdc15p, Tem1p and the Bfa1p-Bub2p checkpoint complex; phosphorylation by Cdc15p creates a Dbf2p-Mob1p phospho-docking site enabling Cdc15p-dependent complex activation and mitotic exit; acts through the MEN to specify Kar9p-mediated asymmetric SPB inheritance; homologous to mammalian centriolin","termid":"PBO:0084912"}


id: MONDO:1010614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital adrenal hyperplasia due to 11-beta hydroxylase deficiency that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital adrenal hyperplasia due to 11-beta hydroxylase deficiency, non-human animal","termid":"MONDO:1010062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital adrenal hyperplasia due to 11-beta hydroxylase deficiency, domestic cat","secondary_identifiers":["OMIA:001661-9685"],"termid":"MONDO:1010614","xrefs":{"Monarch":{"xref_id":"1010614"}}}


id: GO:0050988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The carboxylation of the N-terminal methionine of proteins to form the derivative N-carboxy-L-methionine.","definition_xrefs":["RESID:AA0363"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-methionine carboxylation (obsolete GO:0050988)","termid":"GO:0050988"}


id: MOD:00188
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 6'-bromo-L-tryptophan.","definition_xrefs":["PubMed:12118011","PubMed:9030520","Unimod:340#W","PubMed:9033387","RESID:AA0179","PubMed:9434739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated tryptophan","termid":"MOD:01068"},{"relation_name":"is_a","term_name":"monobrominated residue","termid":"MOD:01912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6'-bromo-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(6-bromo-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"6'-BrTrp","type":"exact"},{"name":"6'-bromo-L-tryptophan","type":"exact"},{"name":"Bromo","type":"related"},{"name":"MOD_RES 6'-bromotryptophan","type":"exact"},{"name":"bromination","type":"related"}],"termid":"MOD:00188"}


id: PBO:0051843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRS4 antisense RNA 1","termid":"PBO:0051843"}


id: GO:0070575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a mature peptide mating pheromone by proteolysis and/or modification of a peptide precursor, occurring in the context of pheromone-induced unidirectional conjugation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide pheromone maturation","termid":"GO:0007323"},{"relation_name":"regulates","term_name":"pheromone-induced unidirectional conjugation","termid":"GO:0000762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"peptide mating pheromone maturation involved in regulation of pheromone-induced unidirectional conjugation","synonyms":[{"name":"peptide mating pheromone formation involved in pheromone-induced unidirectional conjugation","type":"exact"},{"name":"peptide mating pheromone processing involved in pheromone-induced unidirectional conjugation","type":"exact"}],"termid":"GO:0070575"}


id: GO:0072319
data:
  {"annotated_genes":["SJAG_05296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072318"}]},"cv_name":"biological_process","definition":"A protein depolymerization process that results in the disassembly of vesicle coat proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vesicle uncoating","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"vesicle coat disassembly","type":"exact"}],"termid":"GO:0072319","terms_by_termid":{"GO:0072318":null}}


id: PR:Q9HGL9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- whi5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGL9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle transcriptional repressor whi5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.02","synonyms":[{"name":"Spom972h-whi5","type":"exact"},{"name":"meiotically up-regulated gene 54 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGL9"}


id: PBO:0038435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase like 2","termid":"PBO:0038435"}


id: GO:0086023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals beginning with a G protein-coupled adrenergic cell surface receptor combining with epinephrine or norepinephrine, to activate adenylate cyclase, which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating adrenergic receptor signaling pathway","termid":"GO:0071880"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway involved in heart process","termid":"GO:0086103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process","synonyms":[{"name":"adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:0086023"}


id: PBO:0030916
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_substance_in_cell_during_vegetative_growth","termid":"PBO:0030916"}


id: GO:0052679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: terpentedienyl diphosphate = diphosphate + terpentetriene.","definition_xrefs":["RHEA:25617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"terpentetriene synthase activity","secondary_identifiers":["EC:4.2.3.36","MetaCyc:RXN-9455"],"synonyms":[{"name":"terpentedienyl-diphosphate diphosphate-lyase (terpentetriene-forming) activity","type":"exact"}],"termid":"GO:0052679"}


id: PBO:0053040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP1B pseudogene 1","termid":"PBO:0053040"}


id: GO:0051556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leucoanthocyanidins, a class of colorless intermediates in the biosynthetic pathway of the pigmented flavonoids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"leucoanthocyanidin metabolic process","secondary_identifiers":["MetaCyc:PWY1F-823"],"synonyms":[{"name":"leucoanthocyanidin metabolism","type":"exact"}],"termid":"GO:0051556"}


id: PBO:0026836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_poly(A)_polymerase_activity","termid":"PBO:0026836"}


id: PBO:0071249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 90","termid":"PBO:0071249"}


id: PBO:0109294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA oncogene in head and neck cancer 2","termid":"PBO:0109294"}


id: PBO:0000524
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STErile","termid":"PBO:0000524"}


id: PBO:0084367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid binding protein; binds to both free fatty acids with preference for saturated long-chain fatty acids and to sterols; contains two independent lipid-binding sites; involved in the export of free fatty acids and acetylated sterols; export functions are redundant with PRY2, and PRY3; important for survival of cells that accumulate free fatty acids; involved in detoxification  of hydrophobic compounds; secreted glycoprotein and member of the CAP/SCP protein superfamily","termid":"PBO:0084367"}


id: PBO:0079098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 11-1","termid":"PBO:0079098"}


id: PBO:0018275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVE domain (PUA-related) protein","termid":"PBO:0018275"}


id: MONDO:0022981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"die Smulders droog van dijk syndrome","termid":"MONDO:0022981","xrefs":{"Monarch":{"xref_id":"0022981"}}}


id: FYPO:0005032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mutations occur at a normal (i.e. indistinguishable from wild type) frequency.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mutation rate","synonyms":[{"name":"normal mutation rate during mitotic cell cycle","type":"related"},{"name":"normal mutation rate during vegetative growth","type":"exact"}],"termid":"FYPO:0005032"}


id: PATO:0001738
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's lacking physically interaction with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dissociated from","synonyms":[{"name":"dissociated","type":"exact"}],"termid":"PATO:0001738"}


id: PBO:0067364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 464, pseudogene","termid":"PBO:0067364"}


id: PBO:0066969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 271","termid":"PBO:0066969"}


id: GO:0042632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of cholesterol within an organism or cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol homeostasis","termid":"GO:0055092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cholesterol homeostasis","secondary_identifiers":["GO:2000188","GO:2000189"],"synonyms":[{"name":"positive regulation of cholesterol homeostasis","type":"related"},{"name":"regulation of cholesterol homeostasis","type":"related"}],"termid":"GO:0042632"}


id: MONDO:0007804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pallister-Hall syndrome (PHS), a pleiotropic autosomal dominant malformative disorder, is characterized by hypothalamic hamartoma, pituitary dysfunction, bifid epiglottis, polydactyly, and, more rarely, renal abnormalities and genitourinary malformations.","definition_xrefs":["Orphanet:672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pallister-Hall syndrome","secondary_identifiers":["icd11.foundation:1845613381","NORD:1545","NCIT:C84987","MESH:D054975","OMIM:146510","UMLS:C0265220","MEDGEN:120514","SCTID:56677004","ICD9:759.89","DOID:9248","GARD:7305"],"synonyms":[{"name":"PHS","type":"exact"},{"name":"Pallister Hall syndrome","type":"exact"},{"name":"Pallister-Hall syndrome","type":"exact"},{"name":"ano-cerebro-digital syndrome","type":"exact"},{"name":"hypothalamic hamartoblastoma syndrome","type":"exact"},{"name":"hypothalamic hamartoblastoma, hypopituitarism, imperforate anus, and postaxial polydactyly","type":"exact"}],"termid":"MONDO:0007804","xrefs":{"Monarch":{"xref_id":"0007804"}}}


id: MONDO:0004181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon variant of breast adenosis characterized by the presence of irregularly shaped glands, epithelial cells with eosinophilic cytoplasm, and prominent myopepithelial cells. Mild atypia may be present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenosis","termid":"MONDO:0003725"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast adenomyoepithelial adenosis","secondary_identifiers":["MEDGEN:267759","DOID:7312","NCIT:C40391","UMLS:C1511283"],"termid":"MONDO:0004181","xrefs":{"Monarch":{"xref_id":"0004181"}}}


id: PBO:0040800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BHLHE22 antisense RNA 1","termid":"PBO:0040800"}


id: PBO:0051192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-10 (non-functional)","termid":"PBO:0051192"}


id: PBO:0058540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6085","termid":"PBO:0058540"}


id: PBO:0060818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal EF-hand calcium binding protein 3","termid":"PBO:0060818"}


id: PBO:0085665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nuclear export of the large ribosomal subunit; acts as a Crm1p-dependent adapter protein for export of nascent ribosomal subunits through the nuclear pore complex","termid":"PBO:0085665"}


id: GO:0048337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate specification","termid":"GO:0042660"},{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate specification","termid":"GO:0042661"},{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell differentiation","termid":"GO:1905772"},{"relation_name":"positively_regulates","term_name":"mesodermal cell fate specification","termid":"GO:0007501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesodermal cell fate specification","synonyms":[{"name":"activation of mesodermal cell fate specification","type":"narrow"},{"name":"stimulation of mesodermal cell fate specification","type":"narrow"},{"name":"up regulation of mesodermal cell fate specification","type":"exact"},{"name":"up-regulation of mesodermal cell fate specification","type":"exact"},{"name":"upregulation of mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048337"}


id: PBO:0069589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 863, pseudogene","termid":"PBO:0069589"}


id: FYPO:0001490
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable and longer than normal, and has a greater length:diameter ratio than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable elongated vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"elongated inviable cell during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell","type":"exact"},{"name":"inviable elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; elongated vegetative cell","type":"exact"}],"termid":"FYPO:0001490","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0015666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH dehydrogenase (ubiquinone)(predicted)","termid":"PBO:0015666"}


id: PBO:0045819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 9","termid":"PBO:0045819"}


id: PBO:0074272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 13","termid":"PBO:0074272"}


id: MONDO:1040040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated retinopathy caused by variants in the HGSNAT gene.","definition_xrefs":["PMID:25859010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"HGSNAT-related retinopathy","synonyms":[{"name":"HGSNAT-related retinopathy","type":"exact"}],"termid":"MONDO:1040040","xrefs":{"Monarch":{"xref_id":"1040040"}}}


id: MONDO:0013295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing atopic dermatitis that is associated with variation in the region 3p24.","definition_xrefs":["MONDO:patterns/inherited_susceptibility","PMID:19517137","DOID:0110105"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"dermatitis, atopic, susceptibility to","termid":"MONDO:0100178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatitis, atopic, 9","secondary_identifiers":["UMLS:C3150764","MEDGEN:462114","OMIM:613519"],"synonyms":[{"name":"ATOD9","type":"exact"},{"name":"atopic dermatitis 9","type":"exact"},{"name":"atopic dermatitis type 9","type":"exact"},{"name":"dermatitis, ATOPIC, 9","type":"related"},{"name":"dermatitis, atopic, susceptibility to, 9","type":"exact"}],"termid":"MONDO:0013295","xrefs":{"Monarch":{"xref_id":"0013295"}}}


id: PR:P87152
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator spt7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.11c","synonyms":[{"name":"Spom972h-spt7","type":"exact"}],"termid":"PR:P87152"}


id: PBO:0086106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of succinate dehydrogenase; interacts with flavinylated Sdh1p and may function as a chaperone for free Sdh1p, protecting its FAD cofactor from redox reactions before assembly of the complex; soluble protein of the mitochondrial matrix; respiratory defect of null mutant is functionally complemented by Drosophila and human orthologs","termid":"PBO:0086106"}


id: MONDO:0021068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant neoplasm involving the ovary.","definition_xrefs":["NCIT:C4984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian neoplasm","secondary_identifiers":["SCTID:123843001","UMLS:C0919267","ICD9:239.5","EFO:0003893","MEDGEN:181539"],"synonyms":[{"name":"neoplasm of ovary","type":"exact"},{"name":"neoplasm of the ovary","type":"exact"},{"name":"ovarian neoplasm","type":"exact"},{"name":"ovarian tumor","type":"exact"},{"name":"ovarian tumors","type":"exact"},{"name":"ovarian tumour","type":"exact"},{"name":"ovarian tumours","type":"exact"},{"name":"ovary neoplasm","type":"exact"},{"name":"ovary neoplasm (disease)","type":"exact"},{"name":"ovary tumor","type":"exact"},{"name":"ovary tumour","type":"exact"},{"name":"tumor of ovary","type":"exact"},{"name":"tumor of the ovary","type":"exact"},{"name":"tumour of ovary","type":"exact"},{"name":"tumour of the ovary","type":"exact"}],"termid":"MONDO:0021068","xrefs":{"Monarch":{"xref_id":"0021068"}}}


id: PBO:0050986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 70A","termid":"PBO:0050986"}


id: PBO:0073227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA","termid":"PBO:0073227"}


id: GO:0002222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a killer cell immunoglobulin-like receptor capable of cellular activation.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response activating cell surface receptor signaling pathway","termid":"GO:0002220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"stimulatory killer cell immunoglobulin-like receptor signaling pathway","synonyms":[{"name":"stimulatory KIR signaling pathway","type":"exact"},{"name":"stimulatory killer cell immunoglobulin-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002222"}


id: PBO:0043600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer associated 1","termid":"PBO:0043600"}


id: GO:0097138
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BAD and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BAD-BCL-2 complex","termid":"GO:0097138"}


id: GO:0052029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a host signal transduction pathway. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host signal transduction pathway","secondary_identifiers":["GO:0052493"],"synonyms":[{"name":"disruption by symbiont of host signal transduction pathway","type":"exact"},{"name":"disruption of host signal transduction pathway","type":"exact"},{"name":"down regulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"down-regulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"downregulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"inhibition by symbiont of host signal transduction pathway","type":"narrow"},{"name":"negative modulation by organism of host signal transduction pathway","type":"exact"},{"name":"negative regulation by organism of signal transduction in other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"suppression by symbiont of host signal transduction pathway","type":"exact"}],"termid":"GO:0052029"}


id: PBO:0053824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1088","termid":"PBO:0053824"}


id: PR:Q9P6N9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A post-GPI attachment to proteins factor 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13148:SF0","OMA:SCHPO01083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein PER1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.07","secondary_identifiers":["UniProtKB:Q9P6N9"],"synonyms":[{"name":"Spom972h-PGAP3","type":"exact"}],"termid":"PR:Q9P6N9"}


id: FYPO:0001922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein dephosphorylation is normal (i.e. indistinguishable from wild type). Protein dephosphorylation is the removal of a phosphate group from a protein amino acid.","definition_xrefs":["GO:0006470","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein dephosphorylation during vegetative growth","synonyms":[{"name":"normal protein dephosphorylation during mitotic cell cycle","type":"related"},{"name":"normal protein/peptide dephosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001922"}


id: PBO:0072723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING1 and YY1 binding protein","termid":"PBO:0072723"}


id: GO:0003183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the mitral valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve morphogenesis","termid":"GO:0003181"},{"relation_name":"part_of","term_name":"mitral valve development","termid":"GO:0003174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitral valve morphogenesis","termid":"GO:0003183"}


id: GO:0060455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"regulation of gastric acid secretion","termid":"GO:0060453"},{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"negatively_regulates","term_name":"gastric acid secretion","termid":"GO:0001696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gastric acid secretion","termid":"GO:0060455"}


id: PBO:0070531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 30","termid":"PBO:0070531"}


id: PR:000036301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal-type cyclin-dependent kinase 1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"},{"relation_name":"is_a","term_name":"fungal-type cyclin-dependent kinase 1","termid":"PR:000037486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"CDK1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc2","type":"exact"},{"name":"cdk1","type":"related"},{"name":"cell division control protein 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"cell division protein kinase 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"p34 protein kinase (Schizosaccharomyces pombe)","type":"exact"},{"name":"pi002, SPBC11B10.09","type":"related"},{"name":"swo2","type":"related"}],"termid":"PR:000036301"}


id: GO:0046190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring, in the presence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic phenol-containing compound metabolic process","termid":"GO:0018959"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerobic phenol-containing compound biosynthetic process","synonyms":[{"name":"aerobic phenol-containing compound anabolism","type":"exact"},{"name":"aerobic phenol-containing compound biosynthesis","type":"exact"},{"name":"aerobic phenol-containing compound formation","type":"exact"},{"name":"aerobic phenol-containing compound synthesis","type":"exact"}],"termid":"GO:0046190"}


id: GO:0102259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a 1,2-diacyl-sn-glycerol = a monoglyceride + a fatty acid.","definition_xrefs":["GOC:pz","PMID:1477884"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-diacylglycerol acylhydrolase activity (obsolete GO:0102259)","termid":"GO:0102259"}


id: PBO:0051667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inactivation escape 1","termid":"PBO:0051667"}


id: PBO:0070731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 1","termid":"PBO:0070731"}


id: MONDO:0021004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characterized by the presence of brachydactyly, including syndromic and non-syndromic forms.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly","secondary_identifiers":["MEDGEN:67454","icd11.foundation:598200019","DOID:0050581","MESH:D059327","HP:0001156","SCTID:43476002","UMLS:C0221357"],"synonyms":[{"name":"brachydactyly","type":"exact"},{"name":"brachydactyly (disease)","type":"exact"}],"termid":"MONDO:0021004","xrefs":{"Monarch":{"xref_id":"0021004"}}}


id: GO:0106232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hydrolase complex that converts 5-hydroxyisourate (HIU) to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline. This is the second step of the three-step enzymatic reaction that degrades uric acid to (S)-allantoin.","definition_xrefs":["PMID:21795808","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"hydroxyisourate hydrolase complex","synonyms":[{"name":"5-hydroxyisourate hydrolase complex","type":"narrow"},{"name":"HIU hydrolase complex","type":"narrow"},{"name":"HIUH complex","type":"narrow"}],"termid":"GO:0106232"}


