# terms

id: FYPO:0006067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule, does not occur.","definition_xrefs":["PomBase:mah","PMID:22696680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished microtubule polymerization","synonyms":[{"name":"abolished microtubule catastrophe","type":"related"},{"name":"abolished microtubule polymerisation","type":"exact"},{"name":"abolished microtubule polymerization","type":"related"},{"name":"abolished microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"abolished microtubule polymerization during vegetative growth","type":"exact"},{"name":"abolished microtubule shrinkage","type":"related"},{"name":"microtubule polymerization abolished","type":"exact"}],"termid":"FYPO:0006067"}


id: PBO:0032733
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heteromeric(10)","termid":"PBO:0032733"}


id: PBO:0050555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicobacter pylori responsive 1","termid":"PBO:0050555"}


id: GO:0005619
data:
  {"annotated_genes":["SJAG_01321","SJAG_03483","SJAG_02916","SJAG_04236","SJAG_03057","SJAG_03013","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90585,109378,114385,114675,118089],"is_not":false,"summary":null,"term":"GO:0005619"},{"annotations":[92107],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005631"},{"annotations":[87857],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005632"}]},"cv_name":"cellular_component","definition":"The specialized cell wall of the ascospore (spore), which is the product of meiotic division. Examples of this component are found in Fungi.","definition_xrefs":["GOC:vw","ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall","termid":"GO:0009277"},{"relation_name":"is_a","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01321":null,"SJAG_02916":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03483":null,"SJAG_04236":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"ascospore wall","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type spore wall","type":"broad"}],"termid":"GO:0005619","terms_by_termid":{"GO:0005619":null,"GO:0005631":null,"GO:0005632":null}}


id: MONDO:0009369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-immune hydrops fetalis (NIHF), a form of HF, is a severe fetal condition defined as the excessive accumulation of fetal fluid within the fetal extravascular compartments and body cavities, and is the end-stage of a wide variety of disorders.","definition_xrefs":["Orphanet:363999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrops fetalis","termid":"MONDO:0015193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-immune hydrops fetalis","secondary_identifiers":["NCIT:C111905","ICD9:778.0","icd11.foundation:1182287637","UMLS:C0455988","MEDGEN:105327","GARD:17580","OMIM:236750","SCTID:276509008"],"synonyms":[{"name":"Haemoglobin H hydrops fetalis syndrome","type":"related"},{"name":"Hemoglobin H hydrops fetalis syndrome","type":"related"},{"name":"NIHF","type":"related"},{"name":"hydrops fetalis, Alpha-thalassemia-related","type":"related"},{"name":"hydrops fetalis, nonimmune","type":"related"},{"name":"non-immune HF","type":"exact"},{"name":"non-immune fetal edema","type":"exact"},{"name":"non-immune fetal hydrops","type":"exact"},{"name":"non-immune foetal hydrops","type":"exact"},{"name":"non-immune foetal oedema","type":"exact"}],"termid":"MONDO:0009369","xrefs":{"Monarch":{"xref_id":"0009369"}}}


id: GO:0035599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the methylthiolation (-SCH3 addition) of the beta-carbon of peptidyl-aspartic acid to form peptidyl-L-beta-methylthioaspartic acid.","definition_xrefs":["RESID:AA0232","PMID:8844851","PMID:18252828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylthiotransferase activity","termid":"GO:0035596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aspartic acid methylthiotransferase activity","termid":"GO:0035599"}


id: PBO:0031575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_during_vegetative_growth","termid":"PBO:0031575"}


id: GO:1902926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving inulin.","definition_xrefs":["GO_REF:0000068","PMID:23104410","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructan metabolic process","termid":"GO:0010145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"inulin metabolic process","synonyms":[{"name":"inulin metabolism","type":"exact"}],"termid":"GO:1902926"}


id: GO:0010399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the alternating alpha-(1->2)-linked rhamnose and alpha-(1->2)-linked B-galacturonic acid residues of the rhamnogalacturonan I backbone.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan I metabolic process","termid":"GO:0010395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"rhamnogalacturonan I backbone metabolic process","synonyms":[{"name":"rhamnogalacturonan I backbone metabolism","type":"exact"}],"termid":"GO:0010399"}


id: MONDO:0044906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of the bladder that involves the transitional epithelium projecting above the surrounding epithelial surface and consisting of villous or arborescent outgrowths of fibrovascular stroma.","definition_xrefs":["NCIT:C39858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder benign neoplasm","termid":"MONDO:0000384"},{"relation_name":"is_a","term_name":"non-invasive bladder papillary urothelial neoplasm","termid":"MONDO:0003822"},{"relation_name":"is_a","term_name":"urothelial papilloma","termid":"MONDO:0004041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder urothelial papilloma","secondary_identifiers":["MEDGEN:237227","UMLS:C1384678"],"synonyms":[{"name":"bladder transitional cell papilloma","type":"exact"},{"name":"bladder urothelial papilloma","type":"exact"},{"name":"urinary bladder transitional cell papilloma","type":"exact"},{"name":"urinary bladder urothelial papilloma","type":"exact"}],"termid":"MONDO:0044906","xrefs":{"Monarch":{"xref_id":"0044906"}}}


id: GO:0036277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an anticonvulsant stimulus, a drug used to prevent seizures or reduce their severity.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anticonvulsant","termid":"GO:0036277"}


id: PBO:0000088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal family","termid":"PBO:0000088"}


id: MONDO:0004409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that develops in the ducts of the nipple.","definition_xrefs":["NCIT:C27234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nipple carcinoma","termid":"MONDO:0003950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nipple duct carcinoma","secondary_identifiers":["DOID:7953","MEDGEN:233757","UMLS:C1334967"],"synonyms":[{"name":"nipple duct carcinoma","type":"exact"}],"termid":"MONDO:0004409","xrefs":{"Monarch":{"xref_id":"0004409"}}}


id: GO:0048191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Strengthening of a bond between peptides. Peptides are compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide stabilization activity (obsolete GO:0048191)","synonyms":[{"name":"peptide stabilization activity","type":"exact"}],"termid":"GO:0048191"}


id: GO:1903535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lactose biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:12018418","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of lactose biosynthetic process","termid":"GO:1903534"},{"relation_name":"negatively_regulates","term_name":"lactose biosynthetic process","termid":"GO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of lactose biosynthetic process","synonyms":[{"name":"down regulation of lactose anabolism","type":"exact"},{"name":"down regulation of lactose biosynthesis","type":"exact"},{"name":"down regulation of lactose biosynthetic process","type":"exact"},{"name":"down regulation of lactose formation","type":"exact"},{"name":"down regulation of lactose synthesis","type":"exact"},{"name":"down-regulation of lactose anabolism","type":"exact"},{"name":"down-regulation of lactose biosynthesis","type":"exact"},{"name":"down-regulation of lactose biosynthetic process","type":"exact"},{"name":"down-regulation of lactose formation","type":"exact"},{"name":"down-regulation of lactose synthesis","type":"exact"},{"name":"downregulation of lactose anabolism","type":"exact"},{"name":"downregulation of lactose biosynthesis","type":"exact"},{"name":"downregulation of lactose biosynthetic process","type":"exact"},{"name":"downregulation of lactose formation","type":"exact"},{"name":"downregulation of lactose synthesis","type":"exact"},{"name":"inhibition of lactose anabolism","type":"narrow"},{"name":"inhibition of lactose biosynthesis","type":"narrow"},{"name":"inhibition of lactose biosynthetic process","type":"narrow"},{"name":"inhibition of lactose formation","type":"narrow"},{"name":"inhibition of lactose synthesis","type":"narrow"},{"name":"negative regulation of lactose anabolism","type":"exact"},{"name":"negative regulation of lactose biosynthesis","type":"exact"},{"name":"negative regulation of lactose formation","type":"exact"},{"name":"negative regulation of lactose synthesis","type":"exact"}],"termid":"GO:1903535"}


id: PATO:0001813
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's lack elastic tension that facilitate response to stimuli.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonicity","termid":"PATO:0001439"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atonicity","termid":"PATO:0001813"}


id: PBO:0072756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 6","termid":"PBO:0072756"}


id: PBO:0041261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q A chain","termid":"PBO:0041261"}


id: PBO:0041464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 105","termid":"PBO:0041464"}


id: PBO:0052364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 13A","termid":"PBO:0052364"}


id: PBO:0110467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain 39 molecular ruler complex subunit","termid":"PBO:0110467"}


id: GO:1905869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 3'-UTR-mediated mRNA stabilization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:19737525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"is_a","term_name":"regulation of 3'-UTR-mediated mRNA stabilization","termid":"GO:1905868"},{"relation_name":"negatively_regulates","term_name":"3'-UTR-mediated mRNA stabilization","termid":"GO:0070935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"negative regulation of 3'-UTR-mediated mRNA stabilization","synonyms":[{"name":"down regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"down regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"down-regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"down-regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"downregulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"downregulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"inhibition of 3'-UTR-mediated mRNA stabilization","type":"narrow"},{"name":"inhibition of 3'-untranslated region-mediated mRNA stabilization","type":"narrow"},{"name":"negative regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"}],"termid":"GO:1905869"}


id: MONDO:0020363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"honey-droplet corneal dystrophy","secondary_identifiers":["icd11.foundation:896313309","UMLS:C0339300","MEDGEN:573075","GARD:19609","Orphanet:98958"],"termid":"MONDO:0020363","xrefs":{"Monarch":{"xref_id":"0020363"}}}


id: PBO:0055831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and fibronectin type III domain containing 1","termid":"PBO:0055831"}


id: PBO:0039854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 20","termid":"PBO:0039854"}


id: PBO:0053111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCMT1 antisense RNA 2","termid":"PBO:0053111"}


id: GO:0032879
data:
  {"annotated_genes":["SJAG_04597","SJAG_01373","SJAG_04052","SJAG_03970","SJAG_02392","SJAG_03126","SJAG_00296","SJAG_02592","SJAG_04666","SJAG_02366","SJAG_03987","SJAG_05290","SJAG_03268","SJAG_00991","SJAG_04280","SJAG_04464","SJAG_02684","SJAG_04343","SJAG_00661","SJAG_04990","SJAG_04509","SJAG_03048","SJAG_03581","SJAG_00883","SJAG_03850","SJAG_01084","SJAG_01311","SJAG_02605","SJAG_00082","SJAG_01245","SJAG_02419","SJAG_03631","SJAG_00845","SJAG_04140","SJAG_01805","SJAG_04312","SJAG_03591","SJAG_05346","SJAG_01837","SJAG_03453","SJAG_00649","SJAG_00514","SJAG_04920","SJAG_02645","SJAG_04469","SJAG_04551","SJAG_03602","SJAG_03763","SJAG_04465","SJAG_00402","SJAG_01166"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[91558,113669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[94918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045806"},{"annotations":[88431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[88432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[102685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904537"},{"annotations":[106134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[91303,96186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903067"},{"annotations":[94747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[107545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"},{"annotations":[114775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[96187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"},{"annotations":[88433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"},{"annotations":[112269,116311,105500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[102461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"},{"annotations":[104013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045807"},{"annotations":[100499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"},{"annotations":[90269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[110848,92082,99202,93676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[93677,92083,99203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[93678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"},{"annotations":[102696,94147,111510,116979,90342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[94752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[102167,94148,100761,111322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[102699,94710,91190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[98754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"},{"annotations":[119158,111977,111331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000369"},{"annotations":[88240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001135"},{"annotations":[113672,113542,92766,93053,103247,78694,77858,90213,91304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030100"},{"annotations":[76982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060628"},{"annotations":[94188,98722,88243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017157"},{"annotations":[92360,88244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"},{"annotations":[99718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000185"},{"annotations":[106708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902267"},{"annotations":[108264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905391"},{"annotations":[113928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000156"},{"annotations":[108978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any process in which a cell, a substance, or a cellular entity is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"localization","termid":"GO:0051179"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00296":null,"SJAG_00402":null,"SJAG_00514":null,"SJAG_00649":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_00883":null,"SJAG_00991":null,"SJAG_01084":null,"SJAG_01166":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01373":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02366":null,"SJAG_02392":null,"SJAG_02419":null,"SJAG_02592":null,"SJAG_02605":null,"SJAG_02645":null,"SJAG_02684":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03268":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_03591":null,"SJAG_03602":null,"SJAG_03631":null,"SJAG_03763":null,"SJAG_03850":null,"SJAG_03970":null,"SJAG_03987":null,"SJAG_04052":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04465":null,"SJAG_04469":null,"SJAG_04509":null,"SJAG_04551":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04920":null,"SJAG_04990":null,"SJAG_05290":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of localisation","type":"exact"}],"termid":"GO:0032879","terms_by_termid":{"GO:0017157":null,"GO:0030100":null,"GO:0033157":null,"GO:0035432":null,"GO:0042307":null,"GO:0042308":null,"GO:0042997":null,"GO:0045806":null,"GO:0045807":null,"GO:0045921":null,"GO:0046827":null,"GO:0060628":null,"GO:0061454":null,"GO:0120047":null,"GO:0140325":null,"GO:0140429":null,"GO:1900181":null,"GO:1902267":null,"GO:1902424":null,"GO:1902425":null,"GO:1902543":null,"GO:1902854":null,"GO:1903067":null,"GO:1903077":null,"GO:1904537":null,"GO:1905391":null,"GO:1905530":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905665":null,"GO:1905949":null,"GO:2000156":null,"GO:2000185":null,"GO:2000369":null,"GO:2001135":null}}


id: PBO:0073578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 9","termid":"PBO:0073578"}


id: PBO:0028398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_35S_rRNA_precursor_level","termid":"PBO:0028398"}


id: PATO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality which is held by a bearer when the latter's disposition the presence of abnormally proliferating masses of cells.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic","synonyms":[{"name":"tumorous","type":"exact"}],"termid":"PATO:0002011"}


id: PBO:0034257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_activates","termid":"PBO:0034257"}


id: MONDO:0004844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A white patch or plaque on the oral mucosa that cannot be characterized clinically or pathologically as any other disease. The diagnosis of leukoplakia is one of exclusion; other conditions such as candidiasis, lichen planus, leukoedema, etc., must be ruled out before a diagnosis of leukoplakia can be made. Leukoplakia may be a premalignant condition.","definition_xrefs":["NCIT:C3187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukoplakia","termid":"MONDO:0043243"},{"relation_name":"is_a","term_name":"mouth mucosa disorder","termid":"MONDO:0044992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oral mucosa leukoplakia","secondary_identifiers":["DOID:9655","ICD9:528.6","MESH:D007972","SCTID:414603003","UMLS:C0023532","MEDGEN:9738"],"synonyms":[{"name":"leukokeratosis of oral mucosa","type":"exact"},{"name":"leukoplakia of oral mucosa","type":"exact"},{"name":"leukoplakia of the oral mucosa","type":"exact"},{"name":"oral keratoses","type":"exact"},{"name":"oral keratosis","type":"exact"},{"name":"oral leukoplakia","type":"exact"}],"termid":"MONDO:0004844","xrefs":{"Monarch":{"xref_id":"0004844"}}}


id: GO:1905225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyrotropin-releasing hormone (TRH) stimulus. TRH increases the secretion of thyroid-stimulating hormone by the anterior pituitary.","definition_xrefs":["GO_REF:0000071","GOC:sl","PMID:21382270","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to thyrotropin-releasing hormone","synonyms":[{"name":"response to TRH","type":"related"},{"name":"response to protirelin","type":"exact"}],"termid":"GO:1905225"}


id: GO:0042565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex which usually consists of three components, e.g. in Xenopus and yeast, the export receptor CRM1 (also known as exportin 1), the Ran protein and any RNA with a nuclear export sequence (NES). The complex acts to export RNA molecules with a NES from the nucleus through a nuclear pore.","definition_xrefs":["PMID:9323123","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic transport complex","termid":"GO:0031074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA nuclear export complex","termid":"GO:0042565"}


id: PBO:0043047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHORDC1 pseudogene 4","termid":"PBO:0043047"}


id: GO:0031504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the peptidoglycan-based cell wall.","definition_xrefs":["GOC:jl","GOC:mah","GOC:mtg_sensu","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"peptidoglycan-based cell wall organization","synonyms":[{"name":"peptidoglycan-based cell wall organisation","type":"exact"},{"name":"peptidoglycan-based cell wall organization and biogenesis","type":"related"}],"termid":"GO:0031504"}


id: GO:0044149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of structure involved in a symbiotic process","synonyms":[{"name":"positive regulation of development of symbiont during interaction with host","type":"related"},{"name":"positive regulation of development of symbiont involved in interaction with host","type":"related"}],"termid":"GO:0044149"}


id: MONDO:0001979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of the gastrointestinal tract. It is typically caused by the rapid emptying of undigested food from the stomach to the small intestine following gastroesophageal surgery but may be seen secondary to diabetes or the use of certain medications. Clinical signs may be seen 30-60 minutes after eating (early dumping): cramping, nausea, vomiting and diarrhea or they may be seen 1-3 hours later as a result of hyperinsulinemic hypoglycemia (late dumping): sweating, dizziness, confusion and heart palpitations. Untreated, the clinical course progresses to malnutrition and weight loss.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"postgastrectomy syndrome","termid":"MONDO:0004566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"dumping syndrome","secondary_identifiers":["DOID:14495","EFO:1001307","MEDGEN:8501","UMLS:C0013288","NCIT:C2994","icd11.foundation:237191235","MESH:D004377"],"synonyms":[{"name":"dumping (jejunal) syndrome","type":"exact"},{"name":"jejunal syndrome","type":"exact"}],"termid":"MONDO:0001979","xrefs":{"Monarch":{"xref_id":"0001979"}}}


id: GO:0070471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the uterus. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The uterus is a muscular organ of the female mammal for containing and usually for nourishing the young during development prior to birth.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterine smooth muscle contraction","synonyms":[{"name":"myometrial contraction","type":"exact"},{"name":"myometrial smooth muscle contraction","type":"exact"},{"name":"myometrium contraction","type":"exact"}],"termid":"GO:0070471"}


id: PBO:0003254
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Win1-interacting SH3 domain protein","termid":"PBO:0003254"}


id: GO:0120158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of collagen catabolic process","termid":"GO:0010710"},{"relation_name":"is_a","term_name":"positive regulation of collagen metabolic process","termid":"GO:0010714"},{"relation_name":"positively_regulates","term_name":"collagen catabolic process","termid":"GO:0030574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collagen catabolic process","synonyms":[{"name":"activation of collagen catabolic process","type":"narrow"},{"name":"positive regulation of collagen breakdown","type":"exact"},{"name":"positive regulation of collagen catabolism","type":"exact"},{"name":"positive regulation of collagen degradation","type":"exact"},{"name":"up regulation of collagen catabolic process","type":"exact"},{"name":"up-regulation of collagen catabolic process","type":"exact"},{"name":"upregulation of collagen catabolic process","type":"exact"}],"termid":"GO:0120158"}


id: GO:0035955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of dipeptide transport by stopping, preventing or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:9427760","GOC:dgf","PMID:10850718","PMID:17005992"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0035955)","synonyms":[{"name":"negative regulation of dipeptide transport by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of dipeptide transport by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of dipeptide transport by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of dipeptide transport by inhibition of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of dipeptide transport by negative regulation of transcription from Pol II promoter","type":"exact"}],"termid":"GO:0035955"}


id: PR:Q9P784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl401 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L4-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.06","synonyms":[{"name":"Spom972h-rpl401","type":"exact"}],"termid":"PR:Q9P784"}


id: GO:0014805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which smooth muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle adaptation","synonyms":[{"name":"smooth muscle plasticity","type":"related"}],"termid":"GO:0014805"}


id: PBO:0073707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI/DACH domain containing 1","termid":"PBO:0073707"}


id: MONDO:0004307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition characterized by diffuse spread of sarcoma cells throughout the meninges. The neoplastic cells are derived from meningeal connective tissue. Clinically, this disorder may present as a fulminant pachymeningitis and/or encephalitis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningeal sarcoma","termid":"MONDO:0004308"},{"relation_name":"is_a","term_name":"sarcomatosis","termid":"MONDO:0004309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sarcomatosis of the meninges","secondary_identifiers":["MEDGEN:83175","UMLS:C0334612","DOID:7613","ICDO:9539/3","NCIT:C4334"],"synonyms":[{"name":"meningeal cluster sarcomatosis","type":"exact"},{"name":"meningeal sarcomatosis","type":"exact"},{"name":"meningeal sarcomatosis (morphologic abnormality)","type":"exact"},{"name":"meninges sarcomatosis","type":"exact"},{"name":"sarcomatosis of meninges","type":"exact"},{"name":"sarcomatosis of the meninges","type":"exact"}],"termid":"MONDO:0004307","xrefs":{"Monarch":{"xref_id":"0004307"}}}


id: PBO:0073005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel beta subunit 4","termid":"PBO:0073005"}


id: FYPO:0008015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glucose into the cell is decreased with respect to wild-type.","definition_xrefs":["PMID:35781263","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glucose import","termid":"FYPO:0001827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased glucose import","termid":"FYPO:0008015"}


id: PBO:0078347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 13-1","termid":"PBO:0078347"}


id: GO:0120179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an adherens junction into its constituent components. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["PMID:25490267","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction organization","termid":"GO:0034332"},{"relation_name":"is_a","term_name":"cell-cell junction disassembly","termid":"GO:0150147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adherens junction disassembly","termid":"GO:0120179"}


id: PBO:0066786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 85","termid":"PBO:0066786"}


id: GO:0140069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butyryl-CoA + histone = CoA + butyryl-histone.","definition_xrefs":["PMID:27105113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide butyryltransferase activity","termid":"GO:0140065"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746","GO:0140096"],"is_obsolete":false,"name":"histone butyryltransferase activity","termid":"GO:0140069"}


id: PBO:0055470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2903","termid":"PBO:0055470"}


id: MONDO:0009996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rhizomelic syndrome, Urbach type is a rare primary bone dysplasia characterized by upper limbs rhizomelia and other skeletal anomalies (e.g. short stature, dislocated hips, digitalization of the thumb with bifid distal phalanx), craniofacial features (e.g. microcephaly, large anterior fontanelle, fine and sparse scalp hair, depressed nasal bridge, high arched palate, micrognathia, short neck), congenital heart defects (e.g. pulmonary stenosis), delayed psychomotor development and mild flexion contractures of elbows. Radiologic evaluation may reveal flared epiphyses, platyspondyly and/or digital anomalies.","definition_xrefs":["Orphanet:3098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhizomelic syndrome, Urbach type","secondary_identifiers":["MEDGEN:376574","UMLS:C1849382","OMIM:268250","GARD:4705","MESH:C537611"],"synonyms":[{"name":"familial rhizomelic dysplasia","type":"related"},{"name":"rhizomelic dysplasia, familial","type":"related"},{"name":"rhizomelic syndrome","type":"related"}],"termid":"MONDO:0009996","xrefs":{"Monarch":{"xref_id":"0009996"}}}


id: PBO:0080839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 3","termid":"PBO:0080839"}


id: GO:1900708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tensidol A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of tensidol A biosynthetic process","termid":"GO:1900707"},{"relation_name":"negatively_regulates","term_name":"tensidol A biosynthetic process","termid":"GO:1900605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tensidol A biosynthetic process","synonyms":[{"name":"down regulation of tensidol A anabolism","type":"exact"},{"name":"down regulation of tensidol A biosynthesis","type":"exact"},{"name":"down regulation of tensidol A biosynthetic process","type":"exact"},{"name":"down regulation of tensidol A formation","type":"exact"},{"name":"down regulation of tensidol A synthesis","type":"exact"},{"name":"down-regulation of tensidol A anabolism","type":"exact"},{"name":"down-regulation of tensidol A biosynthesis","type":"exact"},{"name":"down-regulation of tensidol A biosynthetic process","type":"exact"},{"name":"down-regulation of tensidol A formation","type":"exact"},{"name":"down-regulation of tensidol A synthesis","type":"exact"},{"name":"downregulation of tensidol A anabolism","type":"exact"},{"name":"downregulation of tensidol A biosynthesis","type":"exact"},{"name":"downregulation of tensidol A biosynthetic process","type":"exact"},{"name":"downregulation of tensidol A formation","type":"exact"},{"name":"downregulation of tensidol A synthesis","type":"exact"},{"name":"inhibition of tensidol A anabolism","type":"exact"},{"name":"inhibition of tensidol A biosynthesis","type":"exact"},{"name":"inhibition of tensidol A biosynthetic process","type":"narrow"},{"name":"inhibition of tensidol A formation","type":"exact"},{"name":"inhibition of tensidol A synthesis","type":"exact"},{"name":"negative regulation of tensidol A anabolism","type":"exact"},{"name":"negative regulation of tensidol A biosynthesis","type":"exact"},{"name":"negative regulation of tensidol A formation","type":"exact"},{"name":"negative regulation of tensidol A synthesis","type":"exact"}],"termid":"GO:1900708"}


id: MONDO:0015025
data:
  {"annotated_genes":["SJAG_01753"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87215],"is_not":false,"summary":null,"term":"MONDO:0015025"}]},"cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the MDH2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01753":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 51","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4479208","OMIM:617339","DOID:0080433","MEDGEN:1372686"],"synonyms":[{"name":"DEE51","type":"exact"},{"name":"EIEE51","type":"exact"},{"name":"MDH2 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 51","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in MDH2","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 51","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 51; EIEE51","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 51","type":"exact"}],"termid":"MONDO:0015025","terms_by_termid":{"MONDO:0015025":null},"xrefs":{"Monarch":{"xref_id":"0015025"}}}


id: FYPO:0004095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein in a cell is normal (i.e. indistinguishable from wild type) during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"},{"relation_name":"is_a","term_name":"normal cellular process during meiotic cell cycle","termid":"FYPO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization during meiotic cell cycle","synonyms":[{"name":"normal protein localisation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004095"}


id: PBO:0048179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha glucosidase","termid":"PBO:0048179"}


id: PBO:0027753
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_calcium","termid":"PBO:0027753"}


id: GO:0060997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"is_a","term_name":"dendritic spine organization","termid":"GO:0097061"},{"relation_name":"part_of","term_name":"dendrite morphogenesis","termid":"GO:0048813"},{"relation_name":"part_of","term_name":"dendritic spine development","termid":"GO:0060996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic spine morphogenesis","termid":"GO:0060997"}


id: PBO:0090532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLI interacting factor family phosphatase","termid":"PBO:0090532"}


id: FYPO:0007278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to euchromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:17289569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to euchromatin","synonyms":[{"name":"normal protein localisation to euchromatin","type":"exact"},{"name":"normal protein localization to euchromatin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to euchromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0007278"}


id: GO:0044300
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An axon arising from cerebellar projecting cells in the cochlea, vestibular nuclei, spinal cord, reticular formation, cerebellar nuclei and basilar pontine nuclei. Mossy fibers enter through all three cerebellar peduncles and send collaterals to the deep cerebellar nuclei, then branch in the white matter and terminate in the granule cell layer. Through this branching, a given mossy fiber can innervate several folia. Mossy fibers synapse on granule cells. The synaptic contacts are made at enlargements along the length of the mossy fiber called mossy fiber rosettes. The enlargements of the rosettes give the axons a mossy-looking appearance in Golgi stained preparations.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cerebellar mossy fiber","synonyms":[{"name":"cerebellar mossy fibre","type":"exact"}],"termid":"GO:0044300"}


id: MONDO:0034671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic complex polydactyly (obsolete MONDO:0034671)","secondary_identifiers":["Orphanet:498470"],"termid":"MONDO:0034671","xrefs":{"Monarch":{"xref_id":"0034671"}}}


id: GO:1901515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of poly-beta-1,6-N-acetyl-D-glucosamine from one side of a membrane to the other.","definition_xrefs":["PMID:15090514","GOC:TermGenie","PMID:18359807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"poly-beta-1,6-N-acetyl-D-glucosamine transmembrane transporter activity","termid":"GO:1901515"}


id: PBO:0030292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_septum_thickness","termid":"PBO:0030292"}


id: PBO:0090125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase (predicted)","termid":"PBO:0090125"}


id: PR:Q9UUB4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUB4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole-succinocarboxamide synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.10","synonyms":[{"name":"SAICAR synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade7","type":"exact"}],"termid":"PR:Q9UUB4"}


id: MONDO:0012021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 17, autosomal dominant","secondary_identifiers":["MEDGEN:854818","OMIM:608367","UMLS:C3888211"],"synonyms":[{"name":"MYP17","type":"exact"},{"name":"myopia 17, autosomal dominant","type":"exact"},{"name":"myopia 4","type":"related"},{"name":"myopia 4, formerly","type":"related"}],"termid":"MONDO:0012021","xrefs":{"Monarch":{"xref_id":"0012021"}}}


id: MONDO:0975835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiectasis and nasal polyposis","secondary_identifiers":["OMIM:620984"],"termid":"MONDO:0975835","xrefs":{"Monarch":{"xref_id":"0975835"}}}


id: PBO:0075886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1","termid":"PBO:0075886"}


id: GO:0044566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a chondrocyte resulting from exposure to an activating factor such as a cellular or soluble ligand. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["GOC:jl","CL:0000138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte activation","termid":"GO:0044566"}


id: GO:0050832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fungus","termid":"GO:0009620"},{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to fungus","secondary_identifiers":["GO:0009817","GO:0042831","GO:0009623"],"synonyms":[{"name":"defence response to fungi","type":"exact"},{"name":"defence response to fungus","type":"exact"},{"name":"defense response to fungi","type":"exact"},{"name":"defense response to fungus, incompatible interaction","type":"narrow"},{"name":"resistance response to pathogenic fungi","type":"narrow"},{"name":"resistance response to pathogenic fungus","type":"narrow"},{"name":"response to parasitic fungi","type":"narrow"},{"name":"response to parasitic fungus","type":"narrow"}],"termid":"GO:0050832"}


id: PBO:0057862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3173","termid":"PBO:0057862"}


id: GO:0031143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A temporary protrusion or retractile process of a cell, associated with flowing movements of the protoplasm, and serving for locomotion and feeding.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pseudopodium","secondary_identifiers":["Wikipedia:Pseudopod"],"synonyms":[{"name":"axopodium","type":"narrow"},{"name":"lobopodium","type":"narrow"},{"name":"pseudopod","type":"exact"},{"name":"pseudopodial protrusion","type":"exact"},{"name":"reticulopodium","type":"narrow"}],"termid":"GO:0031143"}


id: MONDO:0012597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 9","secondary_identifiers":["MESH:C567031","OMIM:610997","UMLS:C1970250","GARD:15505","MEDGEN:369689"],"synonyms":[{"name":"HPC9","type":"related"},{"name":"prostate cancer, hereditary, 9","type":"exact"},{"name":"prostate cancer, hereditary, type 9","type":"exact"}],"termid":"MONDO:0012597","xrefs":{"Monarch":{"xref_id":"0012597"}}}


id: PBO:0054281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1672","termid":"PBO:0054281"}


id: GO:0034012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FAD = AMP + H+ + riboflavin cyclic-4',5'-phosphate.","definition_xrefs":["RHEA:13729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829","GO:0009975"],"is_obsolete":false,"name":"FAD-AMP lyase (cyclizing) activity","secondary_identifiers":["EC:4.6.1.15"],"synonyms":[{"name":"FAD AMP-lyase (cyclic-FMN-forming) activity","type":"related"},{"name":"FAD AMP-lyase (riboflavin-cyclic-4',5'-phosphate-forming) activity","type":"related"},{"name":"FMN cyclase activity","type":"related"}],"termid":"GO:0034012"}


id: PBO:0041900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACN subunit beta associated regulatory protein","termid":"PBO:0041900"}


id: MONDO:0024463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 1","secondary_identifiers":["UMLS:C0949595","GARD:18039","OMIM:233300","DOID:0080493","MEDGEN:215397"],"synonyms":[{"name":"ODG1","type":"exact"},{"name":"XX gonadal dysgenesis","type":"related"},{"name":"XXGD","type":"related"},{"name":"gonadal dysgenesis, 20 type","type":"related"},{"name":"gonadal dysgenesis, XX type","type":"related"},{"name":"ovarian dysgenesis 1","type":"exact"},{"name":"ovarian dysgenesis, hypergonadotropic, autosomal recessive","type":"related"},{"name":"ovarian dysgenesis, hypergonadotropic, with normal karyotype","type":"related"},{"name":"ovarian failure, hypergonadotropic","type":"related"}],"termid":"MONDO:0024463","xrefs":{"Monarch":{"xref_id":"0024463"}}}


id: PBO:0043789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPEB1 antisense RNA 1","termid":"PBO:0043789"}


id: MONDO:0020488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atypical progressive supranuclear palsy (atypical PSP) is a group of clinical syndromes associated with underlying PSP-tau pathology, that do not conform to the classic presentation of PSP (Richardson syndrome), a rare late-onset neurodegenerative disease. The group comprises PSP-Parkinsonism (PSP-P), PSP-Pure akinesia with gait freezing (PSP-PAGF), PSP-corticobasal syndrome (PSP-CBS) and PSP-progressive non fluent aphasia (PSP-PNFA).","definition_xrefs":["Orphanet:99750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive supranuclear palsy","termid":"MONDO:0019037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"atypical progressive supranuclear palsy syndrome","secondary_identifiers":["UMLS:C5548371","GARD:4507","MEDGEN:1779597"],"synonyms":[{"name":"atypical PSP syndrome","type":"exact"}],"termid":"MONDO:0020488","xrefs":{"Monarch":{"xref_id":"0020488"}}}


id: GO:0102792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: sinapoyl aldehyde + NADP + H2O = 2 H+ + trans-sinapate + NADPH.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sinapaldehyde:NAD(P)+ oxidoreductase activity (obsolete GO:0102792)","termid":"GO:0102792"}


id: PBO:0040687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS3 antisense RNA 1","termid":"PBO:0040687"}


id: MONDO:0003677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"lateral myocardial infarction","secondary_identifiers":["DOID:5853","MEDGEN:83306","UMLS:C0340312"],"termid":"MONDO:0003677","xrefs":{"Monarch":{"xref_id":"0003677"}}}


id: PBO:0045262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DND microRNA-mediated repression inhibitor 1 pseudogene 2","termid":"PBO:0045262"}


id: GO:1903240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of positive regulation of the force of heart contraction by chemical signal.","definition_xrefs":["PMID:17242280","GO_REF:0000058","GOC:rl","GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of positive regulation of the force of heart contraction by chemical signal (obsolete GO:1903240)","synonyms":[{"name":"down regulation of positive regulation of the force of heart contraction by chemical signal","type":"exact"},{"name":"down regulation of positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"},{"name":"down-regulation of positive regulation of the force of heart contraction by chemical signal","type":"exact"},{"name":"down-regulation of positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"},{"name":"downregulation of positive regulation of the force of heart contraction by chemical signal","type":"exact"},{"name":"downregulation of positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"},{"name":"inhibition of positive regulation of the force of heart contraction by chemical signal","type":"narrow"},{"name":"inhibition of positive regulation of the force of heart muscle contraction by chemical signal","type":"narrow"},{"name":"negative regulation of positive regulation of the force of heart contraction by chemical signal","type":"exact"},{"name":"negative regulation of positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"}],"termid":"GO:1903240"}


id: PBO:0002665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIE alpha subunit, TFIIEA, Tfa1","termid":"PBO:0002665"}


id: PBO:0075942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG1 divergent transcript","termid":"PBO:0075942"}


id: GO:0016087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of ecdysiostatic hormone, a peptide hormone that inhibits ecdysone secretion.","definition_xrefs":["GOC:mah","DOI:10.1002/(SICI)1520-6327(1997)35:1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide hormone activity","termid":"GO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"positively_regulates","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023","GO:0140677","GO:0005488","GO:0098772","GO:0005515"],"is_obsolete":false,"name":"ecdysiostatic hormone activity","termid":"GO:0016087"}


id: PBO:0050109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 19","termid":"PBO:0050109"}


id: PBO:0028329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_telomere_separation","termid":"PBO:0028329"}


id: PBO:0083690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme of 'de novo' purine biosynthesis; contains both 5-aminoimidazole-4-carboxamide ribonucleotide transformylase and inosine monophosphate cyclohydrolase activities; ADE16 has a paralog, ADE17, that arose from the whole genome duplication; ade16 ade17 mutants require adenine and histidine","termid":"PBO:0083690"}


id: PBO:0041186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 10, pseudogene","termid":"PBO:0041186"}


id: PBO:0072398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 3","termid":"PBO:0072398"}


id: GO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"In organisms that undergo conjugation with cellular fusion, the process resulting in desensitization following exposure to pheromone stimulus that act to down-regulate further stimulation or block initial conjugation responses. An example of this is the adaptation to pheromone during conjugation with cellular fusion in Saccharomyces cerevisiae.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptation of signaling pathway","termid":"GO:0023058"},{"relation_name":"part_of","term_name":"response to pheromone triggering conjugation with cellular fusion","termid":"GO:0000749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion","secondary_identifiers":["GO:0007331","GO:0030453"],"synonyms":[{"name":"adaptation of signalling pathway by response to pheromone involved in conjugation with cellular fusion","type":"exact"},{"name":"adaptation to pheromone during conjugation with cellular fusion","type":"related"},{"name":"desensitization to pheromone during conjugation with cellular fusion","type":"exact"}],"termid":"GO:0000754"}


id: GO:1990017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of a tanycyte that lies within the ependyma and contains the nucleus. A tanycyte is a specialized elongated ventricular ependymal cell that has processes that extend to the outer, or pial, surface of the CNS.","definition_xrefs":["ISBN:0195065719","NIF_Subcellular:sao401910342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell body","termid":"GO:0044297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"somatic portion of tanycyte","synonyms":[{"name":"somatic portion","type":"broad"}],"termid":"GO:1990017"}


id: PBO:0027274
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcription_elongation_from_RNA_polymerase_II_promoter","termid":"PBO:0027274"}


id: GO:2000654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to testosterone stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to testosterone stimulus","termid":"GO:0071394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to testosterone stimulus","termid":"GO:2000654"}


id: GO:0045437
data:
  {"annotated_genes":["SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90999],"is_not":false,"summary":null,"term":"GO:0045437"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + uridine = ribofuranose + uracil.","definition_xrefs":["RHEA:15577","EC:3.2.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosylpyrimidine nucleosidase activity","termid":"GO:0050263"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"uridine nucleosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01080","MetaCyc:URIDINE-NUCLEOSIDASE-RXN"],"synonyms":[{"name":"uridine hydrolase activity","type":"exact"},{"name":"uridine ribohydrolase activity","type":"related"}],"termid":"GO:0045437","terms_by_termid":{"GO:0045437":null}}


id: PBO:0039427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin like 7","termid":"PBO:0039427"}


id: PBO:0071088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 90","termid":"PBO:0071088"}


id: PBO:0045489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSCR4 intronic transcript 1","termid":"PBO:0045489"}


id: PBO:0091127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi kish family protein Ksh1","termid":"PBO:0091127"}


id: GO:0008988
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052907"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine in rRNA + S-adenosyl-L-methionine = H+ + N(6)-methyladenosine in rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:58728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"rRNA (adenine-N6-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ErmC 23S rRNA methyltransferase","type":"narrow"},{"name":"S-adenosyl-L-methionine:rRNA (adenine-6-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:rRNA (adenine-N6-)-methyltransferase activity","type":"related"},{"name":"gene ksgA methyltransferase","type":"narrow"},{"name":"ribonucleic acid-adenine (N(6)) methylase activity","type":"related"},{"name":"ribonucleic acid-adenine (N6) methylase activity","type":"related"},{"name":"ribosomal ribonucleate adenine 6-methyltransferase activity","type":"related"}],"termid":"GO:0008988","terms_by_termid":{"GO:0052907":null}}


id: PBO:0043033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 4B pseudogene 1","termid":"PBO:0043033"}


id: FYPO:0004336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to mitochondrion","synonyms":[{"name":"abnormal protein localisation to mitochondrion","type":"exact"},{"name":"abnormal protein localization to mitochondria","type":"exact"},{"name":"abnormal protein localization to mitochondrion during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to mitochondrion during vegetative growth","type":"exact"}],"termid":"FYPO:0004336"}


id: FYPO:0006581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to fenpropimorph. Cells stop growing (and may die) at a concentration of fenpropimorph that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to fenpropimorph","synonyms":[{"name":"hypersensitive to fenpropimorph","type":"exact"},{"name":"sensitive to fenpropimorph during mitotic cell cycle","type":"related"},{"name":"sensitive to fenpropimorph during vegetative growth","type":"exact"}],"termid":"FYPO:0006581"}


id: PBO:0046778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosin like glycosyltransferase 3","termid":"PBO:0046778"}


id: FYPO:0001313
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003751"},{"annotations":[119745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount, distribution, or morphology of a cell part is normal (i.e. indistinguishable from wild type) when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03250":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal subcellular component during vegetative growth","references_by_uniquename":{"PMID:26774782":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_03250"],"single_locus_genotype_uniquenames":["sst4delta","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal subcellular component during mitotic cell cycle","type":"related"},{"name":"normal subcellular structure during vegetative growth","type":"related"}],"termid":"FYPO:0001313","terms_by_termid":{"FYPO:0003751":null,"FYPO:0003780":null}}


id: PBO:0000425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z7","termid":"PBO:0000425"}


id: MONDO:0003501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the skin of the external ear.","definition_xrefs":["NCIT:C6083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external ear carcinoma","termid":"MONDO:0002944"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"external ear squamous cell carcinoma","secondary_identifiers":["DOID:5538","UMLS:C1333494","MEDGEN:232478"],"synonyms":[{"name":"epidermoid carcinoma of external Ear","type":"exact"},{"name":"epidermoid carcinoma of the external Ear","type":"exact"},{"name":"epidermoid carcinoma of the external ear","type":"exact"},{"name":"external Ear epidermoid carcinoma","type":"exact"},{"name":"external Ear squamous cell carcinoma","type":"exact"},{"name":"external ear squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of external Ear","type":"exact"},{"name":"squamous cell carcinoma of external ear","type":"related"},{"name":"squamous cell carcinoma of the external Ear","type":"exact"}],"termid":"MONDO:0003501","xrefs":{"Monarch":{"xref_id":"0003501"}}}


id: PR:Q9UTN4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfs2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTN4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylation factor subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.14c","synonyms":[{"name":"Spom972h-pfs2","type":"exact"}],"termid":"PR:Q9UTN4"}


id: MONDO:1012697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any demyelinating disease that occurs in calves of the Limousin breed of cattle and is characterized by progressively severe forelimb hypermetria, blindness, behavioural abnormalities and multifocal white matter vacuolation and demyelination.","definition_xrefs":["PMID:2375709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease, non-human animal","termid":"MONDO:1012987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"demyelinating disorder, Limousin cattle","secondary_identifiers":["OMIA:001489-9913"],"termid":"MONDO:1012697","xrefs":{"Monarch":{"xref_id":"1012697"}}}


id: PBO:0061088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 6","termid":"PBO:0061088"}


id: GO:0052704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway resulting in the formation of ergothioneine from histidine via a set of steps in which gamma-glutamyl-hercynylcysteine sulfoxide is formed as an intermediate.","definition_xrefs":["PMID:4276459","PMID:5484456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ergothioneine biosynthetic process","termid":"GO:0052699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"ergothioneine biosynthesis from histidine via gamma-glutamyl-hercynylcysteine sulfoxide","secondary_identifiers":["Wikipedia:Ergothioneine"],"synonyms":[{"name":"ergothioneine biosynthesis from histidine via N-alpha,N-alpha,N-alpha-trimethyl-L-histidine","type":"broad"}],"termid":"GO:0052704"}


id: PR:O94508
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An intron-binding protein aquarius that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02638","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.02","secondary_identifiers":["UniProtKB:O94508"],"synonyms":[{"name":"Spom972h-AQR","type":"exact"},{"name":"complexed with cdc5 protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94508"}


id: GO:1903291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ATP catabolic process.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:10636900","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ATP catabolic process (obsolete GO:1903291)","synonyms":[{"name":"activation of ATP breakdown","type":"narrow"},{"name":"activation of ATP catabolic process","type":"narrow"},{"name":"activation of ATP catabolism","type":"narrow"},{"name":"activation of ATP degradation","type":"narrow"},{"name":"activation of ATP hydrolysis","type":"narrow"},{"name":"positive regulation of ATP breakdown","type":"exact"},{"name":"positive regulation of ATP catabolism","type":"exact"},{"name":"positive regulation of ATP degradation","type":"exact"},{"name":"positive regulation of ATP hydrolysis","type":"narrow"},{"name":"up regulation of ATP breakdown","type":"exact"},{"name":"up regulation of ATP catabolic process","type":"exact"},{"name":"up regulation of ATP catabolism","type":"exact"},{"name":"up regulation of ATP degradation","type":"exact"},{"name":"up regulation of ATP hydrolysis","type":"narrow"},{"name":"up-regulation of ATP breakdown","type":"exact"},{"name":"up-regulation of ATP catabolic process","type":"exact"},{"name":"up-regulation of ATP catabolism","type":"exact"},{"name":"up-regulation of ATP degradation","type":"exact"},{"name":"up-regulation of ATP hydrolysis","type":"narrow"},{"name":"upregulation of ATP breakdown","type":"exact"},{"name":"upregulation of ATP catabolic process","type":"exact"},{"name":"upregulation of ATP catabolism","type":"exact"},{"name":"upregulation of ATP degradation","type":"exact"},{"name":"upregulation of ATP hydrolysis","type":"narrow"}],"termid":"GO:1903291"}


id: FYPO:0006884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle is thicker than normal during mitotic metaphase.","definition_xrefs":["PMID:30463883","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0000120","FYPO:0000002"],"is_obsolete":false,"name":"thick mitotic spindle during mitotic metaphase","synonyms":[{"name":"increased mitotic spindle thickness during mitotic metaphase","type":"exact"},{"name":"thick mitotic spindle during mitotic metaphase during vegetative growth","type":"exact"},{"name":"thick spindle during mitotic metaphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006884"}


id: PATO:0000274
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reproductive quality inhering in a bearer by virtue of the bearer's initiating, sustaining, or supporting reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive quality","termid":"PATO:0001434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fertility","termid":"PATO:0000274"}


id: GO:0033945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of cellobiose from the reducing end of xyloglucans consisting of a beta-(1->4) linked glucan carrying alpha-D-xylosyl groups on O-6 of the glucose residues. To be a substrate, the first residue must be unsubstituted, the second residue may bear a xylosyl group, whether further glycosylated or not, and the third residue, which becomes the new terminus by the action of the enzyme, is preferably xylosylated, but this xylose residue must not be further substituted.","definition_xrefs":["EC:3.2.1.150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"oligoxyloglucan reducing-end-specific cellobiohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.150-RXN"],"synonyms":[{"name":"oligoxyloglucan reducing end-specific cellobiohydrolase activity","type":"related"},{"name":"oligoxyloglucan reducing-end cellobiohydrolase activity","type":"related"}],"termid":"GO:0033945"}


id: PBO:0013781
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by T. reesei dpm1","termid":"PBO:0013781"}


id: GO:0050058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: linoleate = 9-cis,11-trans-octadecadienoate.","definition_xrefs":["RHEA:17381","EC:5.2.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"linoleate isomerase activity","secondary_identifiers":["KEGG_REACTION:R03627","MetaCyc:LINOLEATE-ISOMERASE-RXN"],"synonyms":[{"name":"linoleate delta12-cis-delta11-trans-isomerase activity","type":"related"},{"name":"linoleic acid isomerase activity","type":"related"}],"termid":"GO:0050058"}


id: PBO:0116413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 8","termid":"PBO:0116413"}


id: PBO:0044111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated transcript 70","termid":"PBO:0044111"}


id: PBO:0083241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; expression induced by calcium shortage","termid":"PBO:0083241"}


id: MONDO:0043162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"septooptic dysplasia","termid":"MONDO:0008428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"pagon stephan syndrome","secondary_identifiers":["GARD:4195","MEDGEN:419885","MESH:C538100","UMLS:C2931733"],"synonyms":[{"name":"septo-optic dysplasia with digital anomalies","type":"related"}],"termid":"MONDO:0043162","xrefs":{"Monarch":{"xref_id":"0043162"}}}


id: GO:0098746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fast, initial phase of calcium ion-induced neurotransmitter release, via exocytosis, into the synaptic cleft. This depends on low affinity calcium sensors and typically begins a fraction of a millisecond after Ca2+ influx, and decays rapidly (1-10ms) with a decay constant of around 5-10ms. The underlying molecular mechanisms of this process are distinct from those of the later, slow phase of release.","definition_xrefs":["GOC:dos","PMID:7809151","PMID:7954835","GOC:pad","GOC:PARL","PMID:4405553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion-regulated exocytosis of neurotransmitter","termid":"GO:0048791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0023052","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"fast, calcium ion-dependent exocytosis of neurotransmitter","synonyms":[{"name":"synchronous, calcium ion-dependent exocytosis of neurotransmitter","type":"exact"}],"termid":"GO:0098746"}


id: GO:0086058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of an Purkinje myocyte cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in Purkinje myocyte cell action potential","termid":"GO:0086058"}


id: FYPO:0004782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a greater extent than wild type following exposure to ionizing radiation.","definition_xrefs":["PMID:25533340","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spores resistant to ionizing radiation","synonyms":[{"name":"resistant to ionizing radiation in spore phase","type":"exact"},{"name":"spores resistant to IR","type":"exact"}],"termid":"FYPO:0004782"}


id: MONDO:0007534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beckwith-Wiedemann syndrome (BWS) is a genetic disorder characterized by overgrowth, tumor predisposition and congenital malformations.","definition_xrefs":["Orphanet:116"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"macroglossia","termid":"MONDO:0015496"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic renal or urinary tract malformation (obsolete MONDO:0019721)","termid":"MONDO:0019721"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Beckwith-Wiedemann syndrome","secondary_identifiers":["SCTID:81780002","NORD:845","UMLS:C0004903","MEDGEN:2562","ICD9:759.89","DOID:5572","NANDO:2200959","NCIT:C34415","OMIM:130650","icd11.foundation:803086260","GARD:3343","MedDRA:10050344","MESH:D001506"],"synonyms":[{"name":"BWS","type":"exact"},{"name":"Beckwith-Wiedemann syndrome","type":"exact"},{"name":"Beckwith-Wiedemann syndrome chromosome region","type":"related"},{"name":"EMG syndrome","type":"related"},{"name":"Wiedemann-Beckwith syndrome","type":"exact"},{"name":"Wiedemann-Beckwith syndrome (WBS)","type":"related"},{"name":"exomphalos macroglossia gigantism syndrome","type":"related"},{"name":"exomphalos-macroglossia-gigantism syndrome","type":"exact"}],"termid":"MONDO:0007534","xrefs":{"Monarch":{"xref_id":"0007534"}}}


id: GO:1990081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the biogenic amine trimethylamine to initiate a change in cell activity.","definition_xrefs":["PMID:16878137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trace-amine receptor activity","termid":"GO:0001594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"trimethylamine receptor activity","termid":"GO:1990081"}


id: PBO:0054604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2009","termid":"PBO:0054604"}


id: PBO:0064090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol transfer protein membrane associated 2","termid":"PBO:0064090"}


id: GO:0045979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleosides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleoside metabolic process","termid":"GO:0009118"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"nucleoside metabolic process","termid":"GO:0009116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nucleoside metabolic process","synonyms":[{"name":"activation of nucleoside metabolic process","type":"narrow"},{"name":"positive regulation of nucleoside metabolism","type":"exact"},{"name":"stimulation of nucleoside metabolic process","type":"narrow"},{"name":"up regulation of nucleoside metabolic process","type":"exact"},{"name":"up-regulation of nucleoside metabolic process","type":"exact"},{"name":"upregulation of nucleoside metabolic process","type":"exact"}],"termid":"GO:0045979"}


id: PBO:0086392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative component of the protein phosphatase type 2A complex","termid":"PBO:0086392"}


id: PBO:0029806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_germinated_spores_with_abnormal_shape_and_cells_with_abnormal_shape_(obsolete_FYPO:0002431)","termid":"PBO:0029806"}


id: PBO:0017947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supeoxide dismutase, mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0017947"}


id: MONDO:0012025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any branchiootic syndrome in which the cause of the disease is a mutation in the SIX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiootic syndrome","termid":"MONDO:0018878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branchiootic syndrome 3","secondary_identifiers":["OMIM:608389","GARD:15430","MESH:C564248","MEDGEN:333995","UMLS:C1842124"],"synonyms":[{"name":"BOS3","type":"related"},{"name":"SIX1 branchiootic syndrome","type":"exact"},{"name":"bo syndrome 3","type":"related"},{"name":"branchiootic syndrome 3","type":"exact"},{"name":"branchiootic syndrome caused by mutation in SIX1","type":"exact"},{"name":"branchiootic syndrome type 3","type":"exact"}],"termid":"MONDO:0012025","xrefs":{"Monarch":{"xref_id":"0012025"}}}


id: MONDO:0012866
data:
  {"annotated_genes":["SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87393],"is_not":false,"summary":null,"term":"MONDO:0012866"}]},"cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 35 is a rare form of hereditary spastic paraplegia characterized by childhood (exceptionally adolescent) onset of a complex phenotype presenting with lower limb (followed by upper limb) spasticity with hyperreflexia and extensor plantar responses, with additional manifestations including progressive dysarthria, dystonia, mild cognitive decline, extrapyramidal features, optic atrophy and seizures. White matter abnormalities and brain iron accumulation have also been observed on brain magnetic resonance imaging.","definition_xrefs":["Orphanet:171629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 35","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3496228","DOID:0110786","GARD:10538","MESH:C567311","MEDGEN:501249","NANDO:1200541","SCTID:764688002","OMIM:612319"],"synonyms":[{"name":"FA2H hereditary spastic paraplegia","type":"exact"},{"name":"SPG35","type":"exact"},{"name":"autosomal recessive spastic paraplegia 35","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 35","type":"exact"},{"name":"hereditary spastic paraplegia 35","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in FA2H","type":"exact"},{"name":"hereditary spastic paraplegia type 35","type":"exact"},{"name":"leukodystrophy, dysmyelinating and spastic paraparesis with or without dystonia","type":"exact"},{"name":"leukodystrophy, dysmyelinating, and spastic paraparesis with or without dystonia","type":"related"},{"name":"spastic paraplegia 35, autosomal recessive","type":"related"}],"termid":"MONDO:0012866","terms_by_termid":{"MONDO:0012866":null},"xrefs":{"Monarch":{"xref_id":"0012866"}}}


id: PBO:0091832
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HAP5","termid":"PBO:0091832"}


id: GO:0008942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NH4+ + 3 NAD(P)+ + 2 H2O = nitrite + 3 NAD(P)H + 5 H+.","definition_xrefs":["PMID:31961593","EC:1.7.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"},{"relation_name":"is_a","term_name":"nitrite reductase activity","termid":"GO:0098809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nitrite reductase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:RXN0-6377","KEGG_REACTION:R00787","KEGG_REACTION:R00789"],"synonyms":[{"name":"NAD(P)H2:nitrite oxidoreductase activity","type":"related"},{"name":"NAD(P)H:nitrite oxidoreductase activity","type":"related"},{"name":"NADH-nitrite oxidoreductase activity","type":"related"},{"name":"NADPH-nitrite reductase activity","type":"related"},{"name":"ammonium-hydroxide:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"assimilatory nitrite reductase activity","type":"related"},{"name":"nitrite reductase (reduced nicotinamide adenine dinucleotide (phosphate)) activity","type":"related"},{"name":"nitrite reductase [NAD(P)H2]","type":"related"}],"termid":"GO:0008942"}


id: FYPO:0006834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of primary cell septum biogenesis is increased.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000032","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"increased rate of primary cell septum biogenesis","synonyms":[{"name":"decreased duration of primary cell septum biogenesis","type":"related"},{"name":"increased rate of primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"increased rate of primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"increased rate of primary septum biogenesis","type":"exact"},{"name":"increased rate of primary septum synthesis","type":"related"}],"termid":"FYPO:0006834"}


id: PBO:0031473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_selenite_ion","termid":"PBO:0031473"}


id: PBO:0041354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C4B (Chido blood group)","termid":"PBO:0041354"}


id: PBO:0000223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious","termid":"PBO:0000223"}


id: GO:0048836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the number of petals produced in a developing flower.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete specification of increased petal number (obsolete GO:0048836)","termid":"GO:0048836"}


id: PBO:0034475
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_phosphatidylethanolamine_level","termid":"PBO:0034475"}


id: PBO:0090107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GDP dissociation inhibitor Rdi1","termid":"PBO:0090107"}


id: MONDO:0016694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Pituicytoma (obsolete MONDO:0016694)","termid":"MONDO:0016694","xrefs":{"Monarch":{"xref_id":"0016694"}}}


id: MONDO:0004442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant germ cell tumor that arises from the testis and is characterized by the presence of embryoid bodies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant testicular germ cell tumor","termid":"MONDO:0003510"},{"relation_name":"is_a","term_name":"polyembryoma","termid":"MONDO:0015863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testis polyembryoma","secondary_identifiers":["DOID:8042","MEDGEN:271324","UMLS:C1514200","NCIT:C40962"],"synonyms":[{"name":"polyembryoma of testis","type":"exact"},{"name":"polyembryoma of the testis","type":"exact"},{"name":"testicular polyembryoma","type":"exact"}],"termid":"MONDO:0004442","xrefs":{"Monarch":{"xref_id":"0004442"}}}


id: MONDO:0005186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A psychologically and socially impaired state, with or without physiological changes, that develops as a result of using cocaine and which leads to compulsive behaviors to acquire the substance.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drug dependence","termid":"MONDO:0005303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cocaine dependence","secondary_identifiers":["SCTID:31956009","DOID:9975","icd11.foundation:1691013484","MEDGEN:154705","UMLS:C0600427","ICD9:304.2","EFO:0002610","ICD9:304.20","NCIT:C34492"],"synonyms":[{"name":"cocaine addiction","type":"exact"}],"termid":"MONDO:0005186","xrefs":{"Monarch":{"xref_id":"0005186"}}}


id: GO:0061527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of dopamine by a cell in which the dopamine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonal dopamine secretion","termid":"GO:0099124"},{"relation_name":"is_a","term_name":"catecholamine secretion, neurotransmission","termid":"GO:0160043"},{"relation_name":"part_of","term_name":"synaptic transmission, dopaminergic","termid":"GO:0001963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"dopamine secretion, neurotransmission","termid":"GO:0061527"}


id: PR:O94685
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RalBP1-associated Eps domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.01","secondary_identifiers":["UniProtKB:O94685"],"synonyms":[{"name":"Spom972h-REPS1","type":"exact"}],"termid":"PR:O94685"}


id: PBO:0041626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cache domain containing 1","termid":"PBO:0041626"}


id: PBO:0090359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glycoside hydrolase, family 31","termid":"PBO:0090359"}


id: FYPO:0007552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the ubiquitination of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein ubiquitination during vegetative growth","termid":"FYPO:0002635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein ubiquitination during cellular response to hydroxyurea","synonyms":[{"name":"normal protein ubiquitination during cellular response to HU","type":"exact"},{"name":"normal protein ubiquitination during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal protein ubiquitination during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal protein ubiquitinylation during cellular response to hydroxyurea","type":"exact"},{"name":"normal protein ubiquitylation during cellular response to hydroxyurea","type":"exact"},{"name":"normal protein/peptide ubiquitination during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0007552"}


id: MONDO:0009053
data:
  {"annotated_genes":["SJAG_00660","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87582,87583],"is_not":false,"summary":null,"term":"MONDO:0009053"}]},"cv_name":"mondo","definition":"ALDH18A1-related De Barsy syndrome combines intellectual deficit, bilateral cataracts, and skin and joint hyperlaxity.","definition_xrefs":["Orphanet:35664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"de Barsy syndrome","termid":"MONDO:0017569"},{"relation_name":"is_a","term_name":"P5CS deficiency","termid":"MONDO:0100126"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0005328","MONDO:0005066","MONDO:0004736","MONDO:0006025"],"is_obsolete":false,"name":"ALDH18A1-related de Barsy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:371.89","GARD:16638","MEDGEN:1720006","OMIM:219150","UMLS:C5234852","DOID:0070132","SCTID:59252009"],"synonyms":[{"name":"ARCL3A","type":"exact"},{"name":"De Barsy syndrome A","type":"exact"},{"name":"De Barsy syndrome a","type":"related"},{"name":"Delta-1-pyrroline 5-carboxylate synthetase deficiency","type":"exact"},{"name":"P5CS deficiency","type":"broad"},{"name":"autosomal recessive cutis laxa type IIIA","type":"related"},{"name":"cutis laxa, autosomal recessive, type 3A","type":"related"},{"name":"cutis laxa, autosomal recessive, type IIIA","type":"related"},{"name":"cutis laxa, corneal clouding, and intellectual disability","type":"related"},{"name":"cutis laxa, corneal clouding, and mental retardation","type":"related"},{"name":"neurocutaneous syndrome, Bicknell type","type":"exact"},{"name":"progeroid syndrome of De Barsy","type":"related"}],"termid":"MONDO:0009053","terms_by_termid":{"MONDO:0009053":null},"xrefs":{"Monarch":{"xref_id":"0009053"}}}


id: PBO:0003675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein Fic1","termid":"PBO:0003675"}


id: GO:0060422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a peptidyl-dipeptidase. Peptidyl-dipeptidase activity catalyzes the release of C-terminal dipeptides from a polypeptide chain.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase inhibitor activity","termid":"GO:0030414"},{"relation_name":"negatively_regulates","term_name":"peptidyl-dipeptidase activity","termid":"GO:0008241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016787"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"regulates","termid":"GO:0140096"},{"rel_name":"negatively_regulates","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0008233"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"negatively_regulates","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"negatively_regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0098772","GO:0003674","GO:0140096","GO:0004857","GO:0030234","GO:0008233","GO:0140678"],"is_obsolete":false,"name":"peptidyl-dipeptidase inhibitor activity","termid":"GO:0060422"}


id: PBO:0086520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; partially overlaps dubious ORF YFL015W-A; YFL015C is not an essential gene","termid":"PBO:0086520"}


id: MONDO:0013957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic variant of Mendelian susceptibility to mycobacterial diseases characterized by a selective susceptibility to relatively mild infections with bacillus Calmette-Guerin (BCG).","definition_xrefs":["Orphanet:319600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mendelian susceptibility to mycobacterial diseases due to partial IRF8 deficiency","secondary_identifiers":["DOID:0111986","MEDGEN:814919","UMLS:C3808589","OMIM:614893"],"synonyms":[{"name":"CD11c-positive/CD1c-positive Dendritic cell deficiency, autosomal dominant","type":"related"},{"name":"IMD32A","type":"related"},{"name":"IRF8 autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"IRF8 deficiency, autosomal dominant","type":"related"},{"name":"MSMD due to partial IRF8 deficiency","type":"exact"},{"name":"MSMD due to partial interferon regulatory factor 8 deficiency","type":"exact"},{"name":"Mendelian susceptibility to mycobacterial diseases due to partial interferon regulatory factor 8 deficiency","type":"exact"},{"name":"autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in IRF8","type":"exact"},{"name":"immunodeficiency 32A","type":"related"},{"name":"immunodeficiency 32A, Mycobacteriosis, autosomal dominant","type":"related"},{"name":"immunodeficiency type 32A","type":"exact"}],"termid":"MONDO:0013957","xrefs":{"Monarch":{"xref_id":"0013957"}}}


id: GO:0106035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of an assembled 4Fe-4S] cluster from a scaffold protein to an acceptor protein that contributes to the attainment of the full functional capacity of a protein.","definition_xrefs":["PMID:23615440"],"gene_count":0,"genotype_count":0,"name":"obsolete protein maturation by [4Fe-4S] cluster transfer (obsolete GO:0106035)","termid":"GO:0106035"}


id: GO:1990888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-polyprenyl-6-hydroxyphenol + S-adenosyl-L-methionine = 2-polyprenyl-6-methoxyphenol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:10419476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-polyprenyl-6-hydroxyphenol O-methyltransferase activity","termid":"GO:1990888"}


id: PBO:0001401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sim4 and Mal2 associated (4 and 2 associated) protein 2","termid":"PBO:0001401"}


id: GO:0097660
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Cdc4 in S. cerevisiae.","definition_xrefs":["PMID:9346238","GOC:jd","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Cdc4 ubiquitin ligase complex","termid":"GO:0097660"}


id: MONDO:1012823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital duplication of the spinal cords where there is a bony partition separating the cords and each is contained in their own meningeal sheath.","definition_xrefs":["PMID:30852979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"split spinal cord malformation type I, cattle","secondary_identifiers":["OMIA:002233-9913"],"synonyms":[{"name":"SSCM Type I, cattle","type":"exact"}],"termid":"MONDO:1012823","xrefs":{"Monarch":{"xref_id":"1012823"}}}


id: MONDO:1012695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dwarfism that occurs in cattle due to a mutation in the PRKG2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, PRKG2-related, cattle","secondary_identifiers":["OMIA:001485-9913"],"termid":"MONDO:1012695","xrefs":{"Monarch":{"xref_id":"1012695"}}}


id: MONDO:0003603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hormone producing or non-producing pituitary gland adenoma or carcinoma, not associated with a hormonal syndrome.","definition_xrefs":["NCIT:C4009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"},{"relation_name":"is_a","term_name":"non-functioning endocrine neoplasm","termid":"MONDO:0021119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-functioning pituitary gland neoplasm","secondary_identifiers":["MEDGEN:756062","UMLS:C3163649","SCTID:448563005"],"synonyms":[{"name":"Nonfunctioning pituitary tumor","type":"exact"},{"name":"Nonfunctioning pituitary tumour","type":"exact"},{"name":"non-functioning endocrine neoplasm of pituitary gland","type":"exact"},{"name":"non-functioning neoplasm of pituitary","type":"exact"},{"name":"non-functioning neoplasm of pituitary gland","type":"exact"},{"name":"non-functioning neoplasm of the pituitary","type":"exact"},{"name":"non-functioning neoplasm of the pituitary gland","type":"exact"},{"name":"non-functioning pituitary gland neoplasm","type":"exact"},{"name":"non-functioning pituitary gland tumor","type":"exact"},{"name":"non-functioning pituitary gland tumour","type":"exact"},{"name":"non-functioning pituitary neoplasm","type":"exact"},{"name":"non-functioning pituitary tumor","type":"exact"},{"name":"non-functioning pituitary tumour","type":"exact"},{"name":"non-functioning tumor of pituitary","type":"exact"},{"name":"non-functioning tumor of pituitary gland","type":"exact"},{"name":"non-functioning tumor of the pituitary","type":"exact"},{"name":"non-functioning tumor of the pituitary gland","type":"exact"},{"name":"non-functioning tumour of pituitary","type":"exact"},{"name":"non-functioning tumour of pituitary gland","type":"exact"},{"name":"non-functioning tumour of the pituitary","type":"exact"},{"name":"non-functioning tumour of the pituitary gland","type":"exact"},{"name":"nonfunctional pituitary gland neoplasm","type":"exact"},{"name":"pituitary gland non-functioning endocrine neoplasm","type":"exact"}],"termid":"MONDO:0003603","xrefs":{"Monarch":{"xref_id":"0003603"}}}


id: PBO:0083590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YPR012W is not an essential gene","termid":"PBO:0083590"}


id: PBO:0048493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 5","termid":"PBO:0048493"}


id: GO:0052503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the symbiont calcium-dependent protein kinase pathway during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont calcium-dependent protein kinase pathway (obsolete GO:0052503)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont calcium-dependent protein kinase pathway","type":"exact"},{"name":"positive regulation of defense-related symbiont CDPK pathway by organism","type":"exact"}],"termid":"GO:0052503"}


id: PBO:0028496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_via_N-end_rule_pathway_during_vegetative_growth","termid":"PBO:0028496"}


id: MONDO:0003189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the middle ear","direct_ancestors":[{"relation_name":"is_a","term_name":"middle ear carcinoma","termid":"MONDO:0003190"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"middle ear adenocarcinoma","secondary_identifiers":["MEDGEN:235326","UMLS:C1334758","NCIT:C6848","DOID:4892"],"synonyms":[{"name":"adenocarcinoma of middle Ear","type":"exact"},{"name":"adenocarcinoma of middle ear","type":"related"},{"name":"adenocarcinoma of the middle Ear","type":"exact"},{"name":"adenocarcinoma of the middle ear","type":"exact"},{"name":"middle Ear adenocarcinoma","type":"exact"},{"name":"middle ear adenocarcinoma","type":"exact"}],"termid":"MONDO:0003189","xrefs":{"Monarch":{"xref_id":"0003189"}}}


id: GO:0045569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to TRAIL (TNF-related apoptosis inducing ligand), a member of the tumor necrosis factor ligand family that rapidly induces apoptosis in a variety of transformed cell lines.","definition_xrefs":["PMID:9082980","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"TRAIL binding","synonyms":[{"name":"Apo-2L binding","type":"exact"}],"termid":"GO:0045569"}


id: GO:0032957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving myo-inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with three phosphate groups attached.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate metabolic process","termid":"GO:0043647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inositol trisphosphate metabolic process","synonyms":[{"name":"IP3 metabolic process","type":"exact"},{"name":"IP3 metabolism","type":"exact"},{"name":"inositol trisphosphate metabolism","type":"exact"},{"name":"myo-inositol trisphosphate metabolic process","type":"narrow"}],"termid":"GO:0032957"}


id: GO:0005095
data:
  {"annotated_genes":["SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116609],"is_not":false,"summary":null,"term":"GO:0005095"}]},"cv_name":"molecular_function","definition":"Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"GTPase regulator activity","termid":"GO:0030695"},{"relation_name":"negatively_regulates","term_name":"GTPase activity","termid":"GO:0003924"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0003924"},{"rel_name":"negatively_regulates","termid":"GO:0016787"},{"rel_name":"negatively_regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"regulates","termid":"GO:0003924"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"regulates","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0098772","GO:0003924","GO:0003824","GO:0030234","GO:0004857","GO:0140678","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"GTPase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GIP","type":"broad"}],"termid":"GO:0005095","terms_by_termid":{"GO:0005095":null}}


id: PBO:0012227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferase subunit (predicted)","termid":"PBO:0012227"}


id: MONDO:0006166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A columnar cell lesion characterized by the presence of enlarged terminal ductal lobular units with dilated acini. The acini are lined by more than two layers of columnar epithelial cells. Prominent apical cytoplasmic snouts are present. Secretions are often present in the lumina of the dilated acini.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"columnar cell hyperplasia of the breast","secondary_identifiers":["NCIT:C54183","EFO:1000199","UMLS:C1707446","MEDGEN:310623"],"synonyms":[{"name":"CCH","type":"exact"},{"name":"columnar cell hyperplasia of breast","type":"exact"}],"termid":"MONDO:0006166","xrefs":{"Monarch":{"xref_id":"0006166"}}}


id: PBO:0049625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 28","termid":"PBO:0049625"}


id: GO:0032961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of inositol trisphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inositol phosphate biosynthetic process","termid":"GO:0010920"},{"relation_name":"is_a","term_name":"regulation of inositol trisphosphate biosynthetic process","termid":"GO:0032960"},{"relation_name":"negatively_regulates","term_name":"inositol trisphosphate biosynthetic process","termid":"GO:0032959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inositol trisphosphate biosynthetic process","synonyms":[{"name":"negative regulation of IP3 biosynthesis","type":"exact"},{"name":"negative regulation of IP3 biosynthetic process","type":"exact"},{"name":"negative regulation of inositol trisphosphate anabolism","type":"exact"},{"name":"negative regulation of inositol trisphosphate biosynthesis","type":"exact"},{"name":"negative regulation of inositol trisphosphate formation","type":"exact"},{"name":"negative regulation of inositol trisphosphate synthesis","type":"exact"},{"name":"negative regulation of myo-inositol trisphosphate biosynthesis","type":"narrow"},{"name":"negative regulation of myo-inositol trisphosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032961"}


id: PBO:0113165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine 5'-monophosphate (IMP)-specific 5'-nucleotidase; catalyzes the breakdown of IMP to inosine; responsible for production of nicotinamide riboside and nicotinic acid riboside; tetrameric form negatively regulated by inosine and ATP; expression positively regulated by nicotinic acid and glucose availability; does not show similarity to known 5'-nucleotidases from other organisms","termid":"PBO:0113165"}


id: GO:1904186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly ofa post-anaphase microtubule array.","definition_xrefs":["PMID:15004232","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-anaphase microtubule array organization","synonyms":[{"name":"PAA organization","type":"exact"},{"name":"post-anaphase array organization","type":"exact"},{"name":"post-anaphase microtubule array organisation","type":"exact"}],"termid":"GO:1904186"}


id: GO:0002469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a myeloid dendritic cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["PMID:15771591","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell antigen processing and presentation","termid":"GO:0002469"}


id: GO:0097523
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA-RNA complex composed of RNA polymerase, template DNA, and an RNA transcript.","definition_xrefs":["GOC:cjm","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex","termid":"GO:0001114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription ternary complex","synonyms":[{"name":"transcription protein-DNA-RNA complex","type":"exact"}],"termid":"GO:0097523"}


id: PBO:0091326
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.1424709delA","termid":"PBO:0091326"}


id: PBO:0060897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEURL1 antisense RNA 1","termid":"PBO:0060897"}


id: MONDO:0000629
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007154"}]},"cv_name":"mondo","definition":"A benign neoplasm that involves the cardiovascular system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"cardiovascular neoplasm","termid":"MONDO:0024757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"cardiovascular organ benign neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060091","UMLS:C0848083","MEDGEN:1843462"],"synonyms":[{"name":"cardiovascular system benign neoplasm","type":"exact"}],"termid":"MONDO:0000629","terms_by_termid":{"MONDO:0007154":null},"xrefs":{"Monarch":{"xref_id":"0000629"}}}


id: PBO:0111818
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase-like hydrolase","termid":"PBO:0111818"}


id: PBO:0085488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proliferating cell nuclear antigen (PCNA); functions as the sliding replication clamp for DNA polymerase delta; may function as a docking site for other proteins required for mitotic and meiotic chromosomal DNA replication and for DNA repair; PCNA ubiquitination at K164 plays a crucial role during Okazaki fragment processing","termid":"PBO:0085488"}


id: PR:O74754
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit gamma, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02710","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit gamma, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.13","secondary_identifiers":["UniProtKB:O74754"],"synonyms":[{"name":"F-ATPase gamma subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATP5C1","type":"exact"}],"termid":"PR:O74754"}


id: PBO:0003385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol kinase Tor2","termid":"PBO:0003385"}


id: FYPO:0007645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome segregation is abnormal during one or both of the cell divisions that a cell undergoes prior to entering quiescence (G0).","definition_xrefs":["PMID:27738016","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromosome segregation during G1 to G0 transition","synonyms":[{"name":"abnormal chromosome segregation during G1/G0 transition","type":"exact"},{"name":"abnormal chromosome segregation during establishment of cell quiescence","type":"exact"}],"termid":"FYPO:0007645"}


id: SO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from chromoplast_sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chromoplast_sequence","termid":"SO:0000744"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromoplast_gene","synonyms":[{"name":"chromoplast gene","type":"exact"}],"termid":"SO:0000093"}


id: PBO:0014287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, predicted GPI anchored","termid":"PBO:0014287"}


id: GO:0001562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to protozoan","secondary_identifiers":["GO:0042833"],"synonyms":[{"name":"resistance to pathogenic protozoa","type":"related"},{"name":"response to protozoa","type":"exact"},{"name":"response to protozoon","type":"exact"}],"termid":"GO:0001562"}


id: PBO:0082216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 5 subunit of the 20S proteasome; involved in ubiquitin-dependent catabolism; human homolog is subunit zeta","termid":"PBO:0082216"}


id: GO:0061498
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Structure between the central and outer plaques of the mitotic spindle pole body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate layer of spindle pole body","termid":"GO:0005821"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0005816"],"is_obsolete":false,"name":"intermediate layer of mitotic spindle pole body","termid":"GO:0061498"}


id: PBO:0082292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginine transporter; expression is normally very low and it is unclear what conditions would induce significant expression; ALP1 has a paralog, CAN1, that arose from the whole genome duplication","termid":"PBO:0082292"}


id: GO:0050840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a component of the extracellular matrix.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"extracellular matrix binding","synonyms":[{"name":"adhesive extracellular matrix constituent","type":"related"},{"name":"extracellular matrix constituent binding","type":"exact"}],"termid":"GO:0050840"}


id: GO:0004084
data:
  {"annotated_genes":["SJAG_04149"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052656"},{"annotations":[110747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052654"},{"annotations":[110748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052655"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a branched-chain amino acid (L-leucine, L-isoleucine and L-valine) + 2-oxoglutarate = L-glutamate + a 2-oxocarboxylate derived from the branched-chain amino acid.","definition_xrefs":["EC:2.6.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"branched-chain-amino-acid transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70724","Reactome:R-HSA-508189","Reactome:R-HSA-508179","Reactome:R-HSA-70723"],"synonyms":[{"name":"L-branched chain amino acid aminotransferase activity","type":"related"},{"name":"branched-chain amino acid aminotransferase activity","type":"exact"},{"name":"branched-chain amino acid-glutamate transaminase activity","type":"related"},{"name":"branched-chain aminotransferase activity","type":"related"},{"name":"branched-chain-amino-acid:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"glutamate-branched-chain amino acid transaminase activity","type":"related"},{"name":"transaminase B activity","type":"related"}],"termid":"GO:0004084","terms_by_termid":{"GO:0052654":null,"GO:0052655":null,"GO:0052656":null}}


id: GO:1990892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which chromosome arm chromatin structure is compacted prior to and during mitosis in eukaryotic cells.","definition_xrefs":["PMID:21633354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"mitotic chromosome arm condensation","termid":"GO:1990892"}


id: PBO:0026741
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_heat_stress","termid":"PBO:0026741"}


id: GO:0002554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a platelet or group of platelets.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin secretion involved in inflammatory response","termid":"GO:0002442"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"platelet degranulation","termid":"GO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"serotonin secretion by platelet","synonyms":[{"name":"serotonin release by platelet","type":"related"}],"termid":"GO:0002554"}


id: GO:2000781
data:
  {"annotated_genes":["SJAG_02104","SJAG_00823","SJAG_04457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94225,110491],"is_not":false,"summary":null,"term":"GO:2000781"},{"annotations":[107717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of double-strand break repair.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair","termid":"GO:2000779"},{"relation_name":"positively_regulates","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00823":null,"SJAG_02104":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"positive regulation of double-strand break repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000781","terms_by_termid":{"GO:2000781":null,"GO:2001034":null}}


id: PBO:0040155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid sensing ion channel subunit 1","termid":"PBO:0040155"}


id: MONDO:0004830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation process in fascia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciitis","secondary_identifiers":["ICD9:729.4","MEDGEN:4658","UMLS:C0015645","DOID:9598","NCIT:C50559","HP:0100537","SCTID:36948007","MESH:D005208"],"synonyms":[{"name":"Fascitis","type":"exact"},{"name":"fascia inflammation","type":"exact"},{"name":"fasciitis","type":"exact"},{"name":"fasciitis (disease)","type":"exact"},{"name":"inflammation of fascia","type":"exact"}],"termid":"MONDO:0004830","xrefs":{"Monarch":{"xref_id":"0004830"}}}


id: FYPO:0008067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitochondrion is abnormally hyperconstricted at the fission sites and has a chained \\\"beads-on-a-string\\\" appearance.","definition_xrefs":["PMID:37540145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondria fused","termid":"FYPO:0000056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"constricted chained mitochondrion","termid":"FYPO:0008067"}


id: PR:O13821
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sst4 gene.","definition_xrefs":["UniProtKB:O13821","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.05c","synonyms":[{"name":"Spom972h-sst4","type":"exact"},{"name":"suppressor of ste12 deletion protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13821"}


id: GO:0120296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dopamine + L-glutaminyl-[protein] = 5-dopaminyl-L-glutamyl-[protein] + NH4(+).","definition_xrefs":["PMID:22858378","PMID:32273471","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"peptide dopaminyltransferase activity","secondary_identifiers":["RHEA:66556"],"termid":"GO:0120296"}


id: FYPO:0002993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased protein phosphorylation during cellular response to MMS","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to methyl methanesulphonate","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to MMS","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002993"}


id: GO:0140828
data:
  {"annotated_genes":["SJAG_04698","SJAG_01541","SJAG_04616","SJAG_04028","SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78706,91543,70530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[91544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"},{"annotations":[80411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"},{"annotations":[80410,78462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + Na+(in) = solute(in) + Na+(out).","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"metal ion transmembrane transporter activity","termid":"GO:0046873"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04616":null,"SJAG_04698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"metal cation:monoatomic cation antiporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"solute:metal cation antiporter activity","type":"broad"}],"termid":"GO:0140828","terms_by_termid":{"GO:0010486":null,"GO:0015369":null,"GO:0015385":null,"GO:0015386":null}}


id: GO:0016335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a larval imaginal disc epithelium are generated and organized.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"},{"relation_name":"part_of","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of larval imaginal disc epithelium","termid":"GO:0016335"}


id: MONDO:0015377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"third branchial cleft anomaly","secondary_identifiers":["MEDGEN:850398","GARD:19935","SCTID:73391000119102","UMLS:C3874314","Orphanet:141030"],"synonyms":[{"name":"third branchial cleft cyst","type":"exact"},{"name":"third branchial cleft fistula","type":"exact"}],"termid":"MONDO:0015377","xrefs":{"Monarch":{"xref_id":"0015377"}}}


id: FYPO:0007459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the portion of the nuclear envelope enclosing the mitotic nuclear bridge is abnormal. The nuclear bridge is a narrow constricted region of the nucleus that forms around the mitotic spindle during anaphase.","definition_xrefs":["PomBase:mah","GO:0140510","PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during mitosis","termid":"FYPO:0003779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002403"],"is_obsolete":false,"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge","synonyms":[{"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge during vegetative growth","type":"exact"}],"termid":"FYPO:0007459"}


id: MOD:00937
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Post-translational","definition_xrefs":["Unimod:505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"levuglandinyl (prostaglandin H2) adduct","termid":"MOD:00846"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Levuglandinyl - arginine lactam adduct","synonyms":[{"name":"LG-lactam-R","type":"related"},{"name":"Levuglandinyl - arginine lactam adduct","type":"related"}],"termid":"MOD:00937"}


id: MONDO:0100018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pityriasis rubra pilaris that occurs around the fifth or sixth decade of life.","direct_ancestors":[{"relation_name":"is_a","term_name":"pityriasis rubra pilaris","termid":"MONDO:0100017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"adult onset pityriasis rubra pilaris","synonyms":[{"name":"adult onset PRP","type":"exact"}],"termid":"MONDO:0100018","xrefs":{"Monarch":{"xref_id":"0100018"}}}


id: GO:0001577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A lectin that exhibits calcium independent binding of beta-galactoside sugars.","definition_xrefs":["PMID:9786891"],"gene_count":0,"genotype_count":0,"name":"obsolete galectin (obsolete GO:0001577)","synonyms":[{"name":"S-type lectin","type":"exact"},{"name":"galectin","type":"exact"}],"termid":"GO:0001577"}


id: FYPO:0000720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal fatty acid synthase activity","synonyms":[{"name":"abnormal FAS activity","type":"exact"}],"termid":"FYPO:0000720"}


id: GO:0072667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location in a vacuole, and is prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein localization in organelle","termid":"GO:0072595"},{"relation_name":"part_of","term_name":"protein localization to vacuole","termid":"GO:0072665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein location in vacuole","termid":"GO:0072667"}


id: PBO:0045475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal root ganglia homeobox","termid":"PBO:0045475"}


id: MONDO:0021297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the nasopharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx carcinoma in situ","termid":"MONDO:0000372"},{"relation_name":"is_a","term_name":"nasopharyngeal carcinoma","termid":"MONDO:0015459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma in situ of nasopharynx","secondary_identifiers":["NCIT:C9099","icd11.foundation:1626158287","MEDGEN:83850","SCTID:92664001","UMLS:C0347096"],"synonyms":[{"name":"carcinoma in situ of nasopharynx","type":"exact"},{"name":"carcinoma in situ of the nasopharynx","type":"exact"},{"name":"nasopharyngeal carcinoma in situ","type":"exact"},{"name":"nasopharynx carcinoma in situ","type":"exact"},{"name":"nasopharynx in situ carcinoma","type":"exact"},{"name":"stage 0 carcinoma of nasopharynx","type":"exact"},{"name":"stage 0 carcinoma of the nasopharynx","type":"exact"},{"name":"stage 0 nasopharyngeal cancer","type":"exact"},{"name":"stage 0 nasopharyngeal carcinoma","type":"exact"},{"name":"stage 0 nasopharyngeal carcinoma aJCC v6","type":"exact"},{"name":"stage 0 nasopharyngeal carcinoma aJCC v6, v7, and v8","type":"exact"},{"name":"stage 0 nasopharyngeal carcinoma aJCC v7","type":"exact"},{"name":"stage 0 nasopharyngeal carcinoma aJCC v8","type":"exact"},{"name":"stage 0 nasopharyngeal carcinoma in situ","type":"exact"},{"name":"stage 0 nasopharyngeal throat cancer","type":"exact"},{"name":"stage 0 nasopharynx carcinoma","type":"exact"}],"termid":"MONDO:0021297","xrefs":{"Monarch":{"xref_id":"0021297"}}}


id: PBO:0091467
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Ppr10-Associated protein","termid":"PBO:0091467"}


id: GO:0090091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix disassembly","termid":"GO:0010715"},{"relation_name":"is_a","term_name":"positive regulation of extracellular matrix organization","termid":"GO:1903055"},{"relation_name":"positively_regulates","term_name":"extracellular matrix disassembly","termid":"GO:0022617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of extracellular matrix disassembly","termid":"GO:0090091"}


id: PBO:0040767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3 pseudogene 2","termid":"PBO:0040767"}


id: PBO:0084197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H4; core histone protein required for chromatin assembly and chromosome function; one of two identical histone proteins (see also HHF2); contributes to telomeric silencing; involved in mRNA multiplexing; N-terminal domain involved in maintaining genomic integrity","termid":"PBO:0084197"}


id: GO:0090445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and increases the rate at which this time point is reached.","definition_xrefs":["PMID:17550772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of development, heterochronic","termid":"GO:0045962"},{"relation_name":"is_a","term_name":"positive regulation of nematode larval development","termid":"GO:0061063"},{"relation_name":"is_a","term_name":"regulation of nematode larval development, heterochronic","termid":"GO:0090444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nematode larval development, heterochronic","termid":"GO:0090445"}


id: PBO:0029481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_sterol_ester_level","termid":"PBO:0029481"}


id: PBO:0044847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 131B","termid":"PBO:0044847"}


id: PBO:0049048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 39","termid":"PBO:0049048"}


id: GO:0016667
data:
  {"annotated_genes":["SJAG_01647","SJAG_01038","SJAG_06468","SJAG_02016","SJAG_03290","SJAG_00365","SJAG_04046","SJAG_00196","SJAG_02495","SJAG_03653","SJAG_02599","SJAG_05027","SJAG_04953","SJAG_00822","SJAG_04060","SJAG_01162","SJAG_02827","SJAG_04399","SJAG_02489","SJAG_04539","SJAG_01693","SJAG_00614","SJAG_04125","SJAG_01417","SJAG_04632","SJAG_00419","SJAG_04904","SJAG_03414","SJAG_03992","SJAG_00489","SJAG_01199","SJAG_01292","SJAG_00288"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004148"},{"annotations":[118705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015036"},{"annotations":[58108,64700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016971"},{"annotations":[67530,76205,74041,78875,62352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015038"},{"annotations":[79428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004362"},{"annotations":[95900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036456"},{"annotations":[95390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016668"},{"annotations":[77377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033743"},{"annotations":[60698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008113"},{"annotations":[80288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004604"},{"annotations":[60466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047134"},{"annotations":[117677,80440,92654,101929,78636,76477,72199,78203,80174,101093,78240,89748,91233,92828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015035"},{"annotations":[76603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070224"},{"annotations":[77180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032542"},{"annotations":[70552,78657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004783"},{"annotations":[69375,98816,59411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016972"},{"annotations":[73554,80041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai","EC:1.8.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00288":null,"SJAG_00365":null,"SJAG_00419":null,"SJAG_00489":null,"SJAG_00614":null,"SJAG_00822":null,"SJAG_01038":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01292":null,"SJAG_01417":null,"SJAG_01647":null,"SJAG_01693":null,"SJAG_02016":null,"SJAG_02489":null,"SJAG_02495":null,"SJAG_02599":null,"SJAG_02827":null,"SJAG_03290":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03992":null,"SJAG_04046":null,"SJAG_04060":null,"SJAG_04125":null,"SJAG_04399":null,"SJAG_04539":null,"SJAG_04632":null,"SJAG_04904":null,"SJAG_04953":null,"SJAG_05027":null,"SJAG_06468":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-2213240"],"synonyms":[{"name":"oxidoreductase activity, acting on sulfur group of donors, other acceptors","type":"narrow"},{"name":"oxidoreductase activity, acting on sulphur group of donors","type":"exact"}],"termid":"GO:0016667","terms_by_termid":{"GO:0004148":null,"GO:0004362":null,"GO:0004604":null,"GO:0004783":null,"GO:0004791":null,"GO:0008113":null,"GO:0015035":null,"GO:0015036":null,"GO:0015038":null,"GO:0016668":null,"GO:0016971":null,"GO:0016972":null,"GO:0032542":null,"GO:0033743":null,"GO:0036456":null,"GO:0047134":null,"GO:0070224":null}}


id: PBO:0028189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_aseptate_mononucleate_vegetative_cell,_normal_cell_length","termid":"PBO:0028189"}


id: GO:0019813
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric enzyme complex composed of two subunits, Res and Mod, that functions as an endonuclease and cleaves DNA. Cleavage will only occur when there are two un-methylated copies of a specific recognition site in an inverse orientation on the DNA. Cleavage occurs at a specific distance away from one of the recognition sites. The Mod subunit can act alone as a methyltansferase. DNA restriction systems such as this are used by bacteria to defend against phage and other foreign DNA that may enter a cell.","definition_xrefs":["PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease complex","termid":"GO:1905347"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"type III site-specific deoxyribonuclease complex","synonyms":[{"name":"type III restriction enzyme complex","type":"exact"}],"termid":"GO:0019813"}


id: PBO:0072311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 8","termid":"PBO:0072311"}


id: PBO:0090525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho1","termid":"PBO:0090525"}


id: PBO:0057518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 636","termid":"PBO:0057518"}


id: PBO:0075747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 72 pseudogene 2","termid":"PBO:0075747"}


id: PBO:0045425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent-paired related homeobox pseudogene 5","termid":"PBO:0045425"}


id: PBO:0045722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F5 divergent transcript","termid":"PBO:0045722"}


id: GO:0022881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N-acetylgalactosamine(out) = protein histidine + N-acetylgalactosamine phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"N-acetylgalactosamine transmembrane transporter activity","termid":"GO:0015571"},{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0005215","GO:0016740","GO:0003674","GO:0022857","GO:0003824"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-N-acetylgalactosamine phosphotransferase system transporter activity","synonyms":[{"name":"N-acetylgalactosamine PTS transporter activity","type":"exact"}],"termid":"GO:0022881"}


id: GO:0019635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-aminoethylphosphonate, also known as ciliatine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-aminoethylphosphonate metabolic process","termid":"GO:0046433"},{"relation_name":"is_a","term_name":"primary amino compound catabolic process","termid":"GO:1901161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-aminoethylphosphonate catabolic process","secondary_identifiers":["MetaCyc:PHOSPHONOTASE-PWY"],"synonyms":[{"name":"2-aminoethylphosphonate breakdown","type":"exact"},{"name":"2-aminoethylphosphonate catabolism","type":"exact"},{"name":"2-aminoethylphosphonate degradation","type":"exact"},{"name":"2-phosphonoethylamine catabolic process","type":"exact"},{"name":"2-phosphonoethylamine catabolism","type":"exact"},{"name":"ciliatine catabolic process","type":"exact"},{"name":"ciliatine catabolism","type":"exact"}],"termid":"GO:0019635"}


id: MONDO:0009734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hyperinsulinemic hypoglycemia in which the cause of the disease is a mutation in the ABCC8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperinsulinemic hypoglycemia","termid":"MONDO:0005803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"hyperinsulinemic hypoglycemia, familial, 1","secondary_identifiers":["MEDGEN:419505","SCTID:360339005","UMLS:C2931832","DOID:0070219","OMIM:256450"],"synonyms":[{"name":"ABCC8 hyperinsulinemic hypoglycemia (disease)","type":"exact"},{"name":"HHF1","type":"related"},{"name":"Nesidioblastosis of pancreas","type":"related"},{"name":"hyperinsulinemic hypoglycemia (disease) caused by mutation in ABCC8","type":"exact"},{"name":"hyperinsulinemic hypoglycemia due to SUR1 deficiency","type":"exact"},{"name":"hyperinsulinemic hypoglycemia due to focal adenomatous hyperplasia","type":"related"},{"name":"hyperinsulinemic hypoglycemia, familial, 1","type":"exact"},{"name":"hyperinsulinemic hypoglycemia, familial, type 1","type":"exact"},{"name":"hyperinsulinism, congenital","type":"related"},{"name":"hyperinsulinism, familial, with pancreatic Nesidioblastosis","type":"related"},{"name":"hypoglycemia, hyperinsulinemic, of infancy","type":"related"},{"name":"persistent hyperinsulinemic hypoglycemia of infancy","type":"related"}],"termid":"MONDO:0009734","xrefs":{"Monarch":{"xref_id":"0009734"}}}


id: PR:O94315
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An oxidoreductase YdbC that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03968","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C215.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.11c","secondary_identifiers":["UniProtKB:O94315"],"synonyms":[{"name":"Spom972h-ydbC","type":"exact"}],"termid":"PR:O94315"}


id: MONDO:0024286
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007154"}]},"cv_name":"mondo","definition":"A benign neoplasm arising from arteries or veins.","definition_xrefs":["NCIT:C8537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular organ benign neoplasm","termid":"MONDO:0000629"},{"relation_name":"is_a","term_name":"blood vessel neoplasm","termid":"MONDO:0021080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"benign blood vessel neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:60006","UMLS:C0685121","MEDGEN:195779"],"synonyms":[{"name":"benign blood vessel neoplasm","type":"exact"},{"name":"benign blood vessel tumor","type":"exact"},{"name":"benign blood vessel tumour","type":"exact"}],"termid":"MONDO:0024286","terms_by_termid":{"MONDO:0007154":null},"xrefs":{"Monarch":{"xref_id":"0024286"}}}


id: MONDO:0015924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary arterial hypertension (PAH) is a group of diseases characterized by mean pulmonary artery pressure >20 mmHg and elevated pulmonary arterial resistance leading to right heart failure. PAH is progressive and potentially fatal. PAH may be idiopathic and/ or familial, have overt features of venous/capillary involvement (pulmonary veno-occlusive disease, PVOD/pulmonary capillary hemangiomatosis, PCH), induced by drug or toxin (drug-or toxin-induced PAH), or associated with other diseases like congenital heart disease, connective tissue disease, HIV, schistosomiasis, portal hypertension (PAH associated with other disease).","definition_xrefs":["Orphanet:182090","PMID:30545973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary hypertension","termid":"MONDO:0005149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary arterial hypertension","secondary_identifiers":["EFO:0001361","GARD:7501","MedDRA:10064911","NANDO:1200425","NANDO:2200298","SCTID:11399002","MESH:D000081029","UMLS:C2973725","NANDO:2100103","NORD:1634","icd11.foundation:1931148955","MEDGEN:425404"],"synonyms":[{"name":"PAH","type":"exact"},{"name":"PAH with overt features of venous/capillaries involvement","type":"narrow"},{"name":"PPH","type":"related"},{"name":"PVOD/PCH","type":"narrow"},{"name":"idiopathic pulmonary hypertension","type":"related"},{"name":"pulmonary arterial hypertension","type":"exact"}],"termid":"MONDO:0015924","xrefs":{"Monarch":{"xref_id":"0015924"}}}


id: MONDO:0008305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Currarino syndrome (CS) is a rare congenital disease characterized by the triad of anorectal malformations (ARMs) (usually anal stenosis), presacral mass (commonly anterior sacral meningocele (ASM) or teratoma) and sacral anomalies (i.e. total or partial agenesis of the sacrum and coccyx or deformity of the sacral vertebrae).","definition_xrefs":["Orphanet:1552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Currarino triad","secondary_identifiers":["ICD9:759.89","UMLS:C1531773","DOID:0111546","GARD:1626","icd11.foundation:1532133816","OMIM:176450","MEDGEN:323460","SCTID:413936007","MESH:C536221"],"synonyms":[{"name":"CURRARINO syndrome","type":"related"},{"name":"Currarino syndrome","type":"exact"},{"name":"Currarino triad","type":"exact"},{"name":"Scra1","type":"related"},{"name":"partial sacral agenesis with intact first sacral vertebra, presacral mass and anorectal malformation","type":"related"},{"name":"sacral agenesis syndrome","type":"related"},{"name":"sacral agenesis, hereditary, with presacral Mass, anterior meningocele, and/or teratoma, and anorectal malformation","type":"related"}],"termid":"MONDO:0008305","xrefs":{"Monarch":{"xref_id":"0008305"}}}


id: PBO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA kinase/phosphatase Pnk1","termid":"PBO:0001362"}


id: GO:0004126
data:
  {"annotated_genes":["SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70177],"is_not":false,"summary":null,"term":"GO:0004126"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: cytidine + H+ + H2O = uridine + NH4 and deoxycytidine + H+ + H2O = deoxyuridine + NH4+.","definition_xrefs":["EC:3.5.4.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"cytidine deaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9817513","Reactome:R-HSA-83677","Reactome:R-HSA-73608"],"synonyms":[{"name":"(deoxy)cytidine deaminase activity","type":"exact"},{"name":"cytidine aminohydrolase activity","type":"related"},{"name":"cytosine nucleoside deaminase activity","type":"related"},{"name":"deoxycytidine deaminase activity","type":"related"}],"termid":"GO:0004126","terms_by_termid":{"GO:0004126":null}}


id: MONDO:0030837
data:
  {"annotated_genes":["SJAG_02517"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86136],"is_not":false,"summary":null,"term":"MONDO:0030837"}]},"cv_name":"mondo","definition":"An autosomal dominant neurodevelopmental disorder characterized by global developmental delay apparent in infancy. Affected individuals have delayed walking with variable gait abnormalities, including ataxia and spasticity, impaired intellectual development with poor or absent speech and language, and progressive microcephaly. Dysmorphic facial features may also be observed. Most patients have early-onset seizures; some may develop a demyelinating peripheral neuropathy. The clinical features suggest involvement of both the central and peripheral nervous systems.","definition_xrefs":["OMIM:619092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02517":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, impaired language, epilepsy, and gait abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18535","MEDGEN:1764121","UMLS:C5436788"],"synonyms":[{"name":"NEDMILEG","type":"broad"},{"name":"NEDMILEG, AD","type":"exact"},{"name":"neurodevelopmental disorder with microcephaly, impaired language, epilepsy, and gait abnormalities, autosomal dominant","type":"exact"}],"termid":"MONDO:0030837","terms_by_termid":{"MONDO:0030837":null},"xrefs":{"Monarch":{"xref_id":"0030837"}}}


id: PBO:0070504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 3","termid":"PBO:0070504"}


id: MONDO:0002425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the rectosigmoid area. Representative examples include carcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:C7420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sigmoid colon cancer","termid":"MONDO:0001464"},{"relation_name":"is_a","term_name":"rectosigmoid junction neoplasm","termid":"MONDO:0002423"},{"relation_name":"is_a","term_name":"rectal cancer","termid":"MONDO:0006519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"rectosigmoid junction cancer","secondary_identifiers":["UMLS:C0153443","MEDGEN:57558","ICD9:154.0","DOID:2782","ICD10CM:C19","SCTID:363414004"],"synonyms":[{"name":"cancer of rectosigmoid junction","type":"exact"},{"name":"malignant neoplasm of rectosigmoid","type":"exact"},{"name":"malignant neoplasm of rectosigmoid junction","type":"exact"},{"name":"malignant neoplasm of the rectosigmoid junction","type":"exact"},{"name":"malignant rectosigmoid junction neoplasm","type":"exact"},{"name":"malignant rectosigmoid neoplasm","type":"exact"},{"name":"malignant rectosigmoid tumor","type":"exact"},{"name":"malignant rectosigmoid tumour","type":"exact"},{"name":"malignant tumor of rectosigmoid junction","type":"exact"},{"name":"malignant tumor of the rectosigmoid junction","type":"exact"},{"name":"malignant tumour of rectosigmoid junction","type":"exact"},{"name":"malignant tumour of the rectosigmoid junction","type":"exact"},{"name":"rectosigmoid junction cancer","type":"exact"}],"termid":"MONDO:0002425","xrefs":{"Monarch":{"xref_id":"0002425"}}}


id: MONDO:0001884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a abducens nerve.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"},{"relation_name":"is_a","term_name":"abducens nerve disorder","termid":"MONDO:0020594"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abducens nerve neoplasm","secondary_identifiers":["ICD9:239.7","MEDGEN:224732","UMLS:C1263898","NCIT:C5826","DOID:14125","SCTID:126972009"],"synonyms":[{"name":"VIth cranial nerve neoplasms","type":"exact"},{"name":"VIth cranial nerve tumors","type":"exact"},{"name":"VIth cranial nerve tumours","type":"exact"},{"name":"abducens nerve neoplasm (disease)","type":"exact"},{"name":"abducens nerve neoplasms","type":"exact"},{"name":"abducens nerve tumor","type":"exact"},{"name":"abducens nerve tumors","type":"exact"},{"name":"abducens nerve tumour","type":"exact"},{"name":"abducens nerve tumours","type":"exact"},{"name":"neoplasm of abducens nerve","type":"exact"},{"name":"neoplasm of sixth cranial nerve","type":"exact"},{"name":"neoplasm of the abducens nerve","type":"exact"},{"name":"neoplasm of the sixth cranial nerve","type":"exact"},{"name":"sixth cranial nerve neoplasm","type":"exact"},{"name":"sixth cranial nerve neoplasms","type":"exact"},{"name":"sixth cranial nerve tumor","type":"exact"},{"name":"sixth cranial nerve tumors","type":"exact"},{"name":"sixth cranial nerve tumour","type":"exact"},{"name":"sixth cranial nerve tumours","type":"exact"},{"name":"tumor of abducens nerve","type":"exact"},{"name":"tumor of sixth cranial nerve","type":"exact"},{"name":"tumor of the abducens nerve","type":"exact"},{"name":"tumor of the sixth cranial nerve","type":"exact"},{"name":"tumour of abducens nerve","type":"exact"},{"name":"tumour of sixth cranial nerve","type":"exact"},{"name":"tumour of the abducens nerve","type":"exact"},{"name":"tumour of the sixth cranial nerve","type":"exact"}],"termid":"MONDO:0001884","xrefs":{"Monarch":{"xref_id":"0001884"}}}


id: GO:1901747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of prephenate(2-).","definition_xrefs":["UniPathway:UPA00120","GOC:TermGenie","GOC:yaf","PMID:16752890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"prephenate(2-) metabolic process","termid":"GO:1901745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"prephenate(2-) biosynthetic process","synonyms":[{"name":"prephenate anabolism","type":"exact"},{"name":"prephenate biosynthesis","type":"exact"},{"name":"prephenate formation","type":"exact"},{"name":"prephenate synthesis","type":"exact"},{"name":"prephenate(2-) anabolism","type":"exact"},{"name":"prephenate(2-) biosynthesis","type":"exact"},{"name":"prephenate(2-) formation","type":"exact"},{"name":"prephenate(2-) synthesis","type":"exact"}],"termid":"GO:1901747"}


id: MONDO:0002474
data:
  {"annotated_genes":["SJAG_01432","SJAG_00281"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86018,86019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009824"}]},"cv_name":"mondo","definition":"A hereditary disorder characterized by excessive oxalate production, leading to hyperoxaluria.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"excluded_subClassOf","term_name":"disorder of glyoxylate metabolism","termid":"MONDO:0017703"},{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"primary hyperoxaluria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10020703","MEDGEN:5697","NORD:1608","OMIMPS:259900","SCTID:17901006","UMLS:C0020501","DOID:2977","ICD9:271.8","MESH:D006960","NCIT:C123158","GARD:16530","NANDO:2200503","Orphanet:416"],"synonyms":[{"name":"hyperoxaluria, primary","type":"exact"},{"name":"primary hyperoxaluria","type":"exact"}],"termid":"MONDO:0002474","terms_by_termid":{"MONDO:0009824":null},"xrefs":{"Monarch":{"xref_id":"0002474"}}}


id: GO:1990477
data:
  {"annotated_genes":["SJAG_00456","SJAG_02382","SJAG_04768","SJAG_00701","SJAG_03939"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87830,91129,109563,112161,113059],"is_not":false,"summary":null,"term":"GO:1990477"}]},"cv_name":"cellular_component","definition":"Protein complex formed by an RNA binding protein Red1, an RNA helicase Mtl1, Red5, Rmn1, Iss10/Pir1, and Ars2/Pir2. This complex is required for the recruitment of the nuclear exosome to Mmi1 nuclear focus. It is likely related to the human CBCN complex. This complex is also known as RNA silencing (NURS) complex.","definition_xrefs":["PMID:24713849","PMID:24210919","PMID:32012158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00456":null,"SJAG_00701":null,"SJAG_02382":null,"SJAG_03939":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"MTREC complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990345"],"synonyms":[{"name":"Mtl1-Red1 core complex","type":"exact"},{"name":"NURS complex","type":"exact"},{"name":"PAXT complex","type":"exact"}],"termid":"GO:1990477","terms_by_termid":{"GO:1990477":null}}


id: PBO:0057223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 379","termid":"PBO:0057223"}


id: GO:0097023
data:
  {"annotated_genes":["SJAG_04242"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114907],"is_not":false,"summary":null,"term":"GO:0097023"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose-6-phosphate = dihydroxyacetone + D-glyceraldehyde-3-phosphate.","definition_xrefs":["PMID:21290439","GOC:imk","PMID:11120740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fructose 6-phosphate aldolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:28002"],"termid":"GO:0097023","terms_by_termid":{"GO:0097023":null}}


id: MONDO:0017046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Peripheral neuroepithelioma is a rare noncentral nervous system tumor with evidence of primitive neuroectodermal differentiation.","definition_xrefs":["Orphanet:2677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroepithelial neoplasm","termid":"MONDO:0021193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroepithelioma","secondary_identifiers":["icd11.foundation:841824628","GARD:3963"],"termid":"MONDO:0017046","xrefs":{"Monarch":{"xref_id":"0017046"}}}


id: MONDO:0859378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 25","secondary_identifiers":["MEDGEN:1840911","OMIM:620243","DOID:0070401","UMLS:C5830275"],"termid":"MONDO:0859378","xrefs":{"Monarch":{"xref_id":"0859378"}}}


id: GO:0038164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the glycoprotein thrombopoietin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:bf","PMID:19630807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"thrombopoietin receptor activity","termid":"GO:0038164"}


id: MONDO:0015994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy-white matter spongiosis syndrome","secondary_identifiers":["Orphanet:1877","GARD:3854"],"synonyms":[{"name":"Atrophie blanche","type":"related"},{"name":"muscular dystrophy white matter spongiosis","type":"related"}],"termid":"MONDO:0015994","xrefs":{"Monarch":{"xref_id":"0015994"}}}


id: MONDO:0970999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 92","secondary_identifiers":["MEDGEN:1856349","DOID:0070591","OMIM:620848","UMLS:C5935625"],"termid":"MONDO:0970999","xrefs":{"Monarch":{"xref_id":"0970999"}}}


id: PBO:0075371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 9","termid":"PBO:0075371"}


id: GO:0034211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"GTP dependent catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate.","definition_xrefs":["PMID:17200152","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016301","GO:0004672","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"GTP-dependent protein kinase activity","termid":"GO:0034211"}


id: FYPO:0000675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which protein targeting is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular protein transport during vegetative growth","termid":"FYPO:0000215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein targeting during vegetative growth","synonyms":[{"name":"abnormal protein targeting during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000675"}


id: PR:O59713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diphthamide biosynthesis protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03685","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.05","secondary_identifiers":["UniProtKB:O59713"],"synonyms":[{"name":"Spom972h-DPH1","type":"exact"}],"termid":"PR:O59713"}


id: PR:O42881
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acyl-protein thioesterase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01410","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-protein thioesterase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.04c","secondary_identifiers":["UniProtKB:O42881"],"synonyms":[{"name":"Spom972h-LYPLA2","type":"exact"}],"termid":"PR:O42881"}


id: GO:0009986
data:
  {"annotated_genes":["SJAG_02173","SJAG_03295","SJAG_01290","SJAG_00096","SJAG_01861","SJAG_01975","SJAG_04720","SJAG_01835","SJAG_04238","SJAG_02649","SJAG_02959","SJAG_00781","SJAG_03824","SJAG_00239","SJAG_04685","SJAG_00784","SJAG_02435","SJAG_00109","SJAG_01017","SJAG_04789","SJAG_02711","SJAG_02580","SJAG_02192","SJAG_03521","SJAG_04850","SJAG_00254","SJAG_00485","SJAG_04875","SJAG_00667","SJAG_02131","SJAG_01755","SJAG_01029","SJAG_04851","SJAG_03640","SJAG_02260","SJAG_00981","SJAG_04398","SJAG_00310","SJAG_05272","SJAG_00481","SJAG_00415","SJAG_00340","SJAG_00218","SJAG_02093","SJAG_03998","SJAG_01086","SJAG_04209","SJAG_04864","SJAG_04723","SJAG_03204","SJAG_02916","SJAG_02076"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[66900,71614,74489,76787,78174,80426,87919,87920,88408,92195,93520,96034,96435,96436,97261,103548,103612,106603,107130,115885],"is_not":false,"summary":null,"term":"GO:0009986"},{"annotations":[89032],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010339"},{"annotations":[103033,103285,103284,107172,116864],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070263"},{"annotations":[104314,90459,91921,94388,95187,108082,115058,118080,106871,114042,95189,119072,114679,102557,115903,95175,114779,117640,95612,90264,116572,118637,95188,102564,102565,113336],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009897"}]},"cv_name":"cellular_component","definition":"The external part of the cell wall and/or plasma membrane.","definition_xrefs":["GOC:sm","GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00109":null,"SJAG_00218":null,"SJAG_00239":null,"SJAG_00254":null,"SJAG_00310":null,"SJAG_00340":null,"SJAG_00415":null,"SJAG_00481":null,"SJAG_00485":null,"SJAG_00667":null,"SJAG_00781":null,"SJAG_00784":null,"SJAG_00981":null,"SJAG_01017":null,"SJAG_01029":null,"SJAG_01086":null,"SJAG_01290":null,"SJAG_01755":null,"SJAG_01835":null,"SJAG_01861":null,"SJAG_01975":null,"SJAG_02076":null,"SJAG_02093":null,"SJAG_02131":null,"SJAG_02173":null,"SJAG_02192":null,"SJAG_02260":null,"SJAG_02435":null,"SJAG_02580":null,"SJAG_02649":null,"SJAG_02711":null,"SJAG_02916":null,"SJAG_02959":null,"SJAG_03204":null,"SJAG_03295":null,"SJAG_03521":null,"SJAG_03640":null,"SJAG_03824":null,"SJAG_03998":null,"SJAG_04209":null,"SJAG_04238":null,"SJAG_04398":null,"SJAG_04685":null,"SJAG_04720":null,"SJAG_04723":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04864":null,"SJAG_04875":null,"SJAG_05272":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell surface","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0009929","GO:0009928"],"synonyms":[{"name":"cell associated","type":"exact"},{"name":"cell bound","type":"exact"}],"termid":"GO:0009986","terms_by_termid":{"GO:0009897":null,"GO:0009986":null,"GO:0010339":null,"GO:0070263":null}}


id: PBO:0048236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 5","termid":"PBO:0048236"}


id: PBO:0048668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrokine 3, pseudogene","termid":"PBO:0048668"}


id: MONDO:0030356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 21 without polydactyly","secondary_identifiers":["MEDGEN:1794171","OMIM:619479","UMLS:C5561961"],"synonyms":[{"name":"SRTD21","type":"exact"},{"name":"short-rib thoracic dysplasia 21 without polydactyly","type":"exact"}],"termid":"MONDO:0030356","xrefs":{"Monarch":{"xref_id":"0030356"}}}


id: PBO:0041400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 52","termid":"PBO:0041400"}


id: PBO:0017502
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of TYrosine phosphatase","termid":"PBO:0017502"}


id: SO:1000061
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The amino acid change following from the codon change changes the gross properties (size, charge, hydrophobicity) of the amino acid in that position.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000061 sequence_variant_causing_nonconservative_missense_codon_change_in_transcript (obsolete SO:1000061)","synonyms":[{"name":"mutation causing nonconservative missense codon change in transcript","type":"related"},{"name":"sequence variant causing nonconservative missense codon change in transcript","type":"exact"}],"termid":"SO:1000061"}


id: MOD:00858
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to D-alanine.","definition_xrefs":["PubMed:7961627","RESID:AA0191#SER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-alanine","termid":"MOD:00862"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"deoxygenated residue","termid":"MOD:01161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-alanine (Ser)","synonyms":[{"name":"(R)-2-aminopropanoic acid","type":"exact"},{"name":"D-Ala(Ser)","type":"exact"},{"name":"D-alanine","type":"exact"},{"name":"MOD_RES D-alanine (Ser)","type":"exact"}],"termid":"MOD:00858"}


id: PBO:0044395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 23, pseudogene","termid":"PBO:0044395"}


id: MONDO:0019958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete insulinoma (obsolete MONDO:0019958)","termid":"MONDO:0019958","xrefs":{"Monarch":{"xref_id":"0019958"}}}


id: PBO:0001500
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatoma","termid":"PBO:0001500"}


id: PBO:0079833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UMODL1 antisense RNA 1","termid":"PBO:0079833"}


id: GO:0042436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of compounds that contain an indole (2,3-benzopyrrole) skeleton.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole-containing compound catabolic process","synonyms":[{"name":"indole derivative catabolic process","type":"exact"},{"name":"indole derivative catabolism","type":"exact"},{"name":"indole-containing compound breakdown","type":"exact"},{"name":"indole-containing compound catabolism","type":"exact"},{"name":"indole-containing compound degradation","type":"exact"}],"termid":"GO:0042436"}


id: PBO:0040795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biglycan","termid":"PBO:0040795"}


id: PBO:0080986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB20 antisense RNA 2","termid":"PBO:0080986"}


id: FYPO:0004779
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of farnesyltranstransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal farnesyltranstransferase activity","termid":"FYPO:0004779"}


id: PR:Q9P7C0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar RNA-interacting protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01388","PANTHER:PTHR19865:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C2E1P5.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P5.05","secondary_identifiers":["UniProtKB:Q9P7C0"],"synonyms":[{"name":"Spom972h-RRP9","type":"exact"}],"termid":"PR:Q9P7C0"}


id: PBO:0005156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin independence factor Cif1","termid":"PBO:0005156"}


id: GO:1900524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of flocculation via cell wall protein-carbohydrate interaction process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:10591965","PMID:15466424","GOC:dgf","GOC:TermGenie","PMID:16568252"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900524)","synonyms":[{"name":"activation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900524"}


id: PBO:0089520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP 3'-tRNA nucleotidyltransferase Cca1","termid":"PBO:0089520"}


id: GO:0051544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of elastin.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of elastin biosynthetic process (obsolete GO:0051544)","synonyms":[{"name":"activation of elastin biosynthetic process","type":"narrow"},{"name":"stimulation of elastin biosynthetic process","type":"narrow"},{"name":"up regulation of elastin biosynthetic process","type":"exact"},{"name":"up-regulation of elastin biosynthetic process","type":"exact"},{"name":"upregulation of elastin biosynthetic process","type":"exact"}],"termid":"GO:0051544"}


id: FYPO:0003121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region such as the sme2 locus.","definition_xrefs":["PMID:22582262","PMID:24173580","PMID:23117617","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal rate of homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"normal rate of homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"normal rate of homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"normal rate of synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003121"}


id: MONDO:0012669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Legius syndrome, also known as NF1-like syndrome, is a rare, genetic skin pigmentation disorder characterized by multiple cafC)-au-lait macules with or without axillary or inguinal freckling.","definition_xrefs":["Orphanet:137605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"Noonan syndrome and Noonan-related syndrome","termid":"MONDO:0020297"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005093"],"is_obsolete":false,"name":"Legius syndrome","secondary_identifiers":["SCTID:703541007","ICD9:709.09","OMIM:611431","DOID:0070484","icd11.foundation:1025118245","GARD:10714","NCIT:C176941","UMLS:C1969623","MEDGEN:370709","MESH:C548032"],"synonyms":[{"name":"Legius syndrome","type":"exact"},{"name":"NF1-like syndrome","type":"exact"},{"name":"neurofibromatosis 1-like syndrome","type":"exact"},{"name":"neurofibromatosis type 1 like syndrome","type":"related"},{"name":"neurofibromatosis type 1-like syndrome","type":"related"}],"termid":"MONDO:0012669","xrefs":{"Monarch":{"xref_id":"0012669"}}}


id: PBO:0091505
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-coding RNA Associated to Mmi1","termid":"PBO:0091505"}


id: PBO:0047471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular dendritic cell secreted protein","termid":"PBO:0047471"}


id: PBO:0036445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1 Atg8 and Atg12 E1 activating enzyme Atg7","termid":"PBO:0036445"}


id: GO:0002795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antimicrobial peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide production","termid":"GO:0002785"},{"relation_name":"is_a","term_name":"negative regulation of peptide secretion","termid":"GO:0002792"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide secretion","termid":"GO:0002794"},{"relation_name":"negatively_regulates","term_name":"antimicrobial peptide secretion","termid":"GO:0002776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of antimicrobial peptide secretion","synonyms":[{"name":"down regulation of antimicrobial peptide secretion","type":"exact"},{"name":"down-regulation of antimicrobial peptide secretion","type":"exact"},{"name":"downregulation of antimicrobial peptide secretion","type":"exact"},{"name":"inhibition of antimicrobial peptide secretion","type":"narrow"}],"termid":"GO:0002795"}


id: MONDO:0030977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive 7","secondary_identifiers":["GARD:18444","OMIM:619216","UMLS:C5543119","DOID:0081426","MEDGEN:1786836"],"synonyms":[{"name":"HMNMYO","type":"exact"},{"name":"neuropathy, hereditary motor, with myopathic features","type":"exact"}],"termid":"MONDO:0030977","xrefs":{"Monarch":{"xref_id":"0030977"}}}


id: GO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin J (PGJ(2)), a metabolite of prostaglandin D (PGD(2)) to initiate a change in cell activity.","definition_xrefs":["PMID:12878180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"prostaglandin J receptor activity","synonyms":[{"name":"PGJ receptor activity","type":"related"},{"name":"PGJ(2) receptor activity","type":"exact"}],"termid":"GO:0001785"}


id: GO:0016545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during courtship where the male insect vibrates his wings. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior, veined wing extension","termid":"GO:0048065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, veined wing vibration","synonyms":[{"name":"male courtship behavior, wing vibration","type":"related"},{"name":"male courtship behaviour, veined wing vibration","type":"exact"},{"name":"male courtship behaviour, wing vibration","type":"related"}],"termid":"GO:0016545"}


id: PBO:0000846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Vip1","termid":"PBO:0000846"}


id: GO:0010643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between one cell and another cell by the transfer of small, water-soluble molecules or metabolites between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:dph","GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell communication by chemical coupling","termid":"GO:0010643"}


id: SO:0001944
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H2A histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2A_acetylation_site","termid":"SO:0002142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AK9_acetylation_site","synonyms":[{"name":"H2AK9 acetylation site","type":"exact"},{"name":"H2AK9ac","type":"exact"}],"termid":"SO:0001944"}


id: PBO:0084432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL-activator protein; encoded within the complex locus MAL4","termid":"PBO:0084432"}


id: MONDO:0007285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cataract (disease) in which the cause of the disease is a mutation in the GJA8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"},{"relation_name":"excluded_subClassOf","term_name":"cataract - microcornea syndrome","termid":"MONDO:0015300"},{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 1 multiple types","secondary_identifiers":["OMIM:116200","GARD:15047","UMLS:C1861828","DOID:0110231","MEDGEN:349374","MESH:C566158"],"synonyms":[{"name":"CAE1","type":"narrow"},{"name":"CTRCT1","type":"exact"},{"name":"CZP1","type":"narrow"},{"name":"Duffy linked cataract","type":"exact"},{"name":"GJA8 cataract (disease)","type":"exact"},{"name":"cataract (disease) caused by mutation in GJA8","type":"exact"},{"name":"cataract 1, multiple types","type":"related"},{"name":"cataract 1, multiple types, with or without microcornea","type":"exact"},{"name":"cataract, Duffy-linked","type":"related"},{"name":"cataract, zonular pulverulent, 1","type":"related"},{"name":"zonular pulverulent cataract 1","type":"narrow"}],"termid":"MONDO:0007285","xrefs":{"Monarch":{"xref_id":"0007285"}}}


id: PBO:0090078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase inhibitor, endosulfine Igo1","termid":"PBO:0090078"}


id: PBO:0087260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase involved in vacuolar protein sorting; functions as a membrane-associated complex with Vps34p; active form recruits Vps34p to the Golgi membrane; interacts with the GDP-bound form of Gpa1p; myristoylated; a fraction is localized, with Vps34p, to nuclear pores at nucleus-vacuole junctions and may facilitate transcription elongation for genes positioned at the nuclear periphery","termid":"PBO:0087260"}


id: GO:0075235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of zoospore movement on or near host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of zoospore movement on or near host (obsolete GO:0075235)","synonyms":[{"name":"regulation of zoospore motility on or near host","type":"exact"}],"termid":"GO:0075235"}


id: PBO:0113452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of EGO/GSE complex; vacuolar/endosomal membrane-associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from endosome to plasma membrane; targeted to vacuole via AP-3 pathway; loss results in defect in vacuolar acidification","termid":"PBO:0113452"}


id: PBO:0034462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_brefeldin_A","termid":"PBO:0034462"}


id: PBO:0069962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1256, pseudogene","termid":"PBO:0069962"}


id: PBO:0039029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 5","termid":"PBO:0039029"}


id: MONDO:0021746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"},{"relation_name":"is_a","term_name":"pyelitis","termid":"MONDO:0006938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pyelocystitis","secondary_identifiers":["UMLS:C0034184","MEDGEN:18778","MESH:D053653"],"synonyms":[{"name":"Cystopyelitis","type":"related"},{"name":"Pyelocystitis","type":"related"}],"termid":"MONDO:0021746","xrefs":{"Monarch":{"xref_id":"0021746"}}}


id: MONDO:0009013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"convulsive disorder, familial, with prenatal or early onset","secondary_identifiers":["MESH:C565678","OMIM:217200","UMLS:C1857575","MEDGEN:387859"],"synonyms":[{"name":"convulsive disorder, familial, with prenatal or early onset","type":"exact"}],"termid":"MONDO:0009013","xrefs":{"Monarch":{"xref_id":"0009013"}}}


id: PBO:0054900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2314","termid":"PBO:0054900"}


id: GO:0010444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a meristemoid acquires the specialized features of a guard mother cell.","definition_xrefs":["GOC:tb","GOC:expert_db"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"},{"relation_name":"part_of","term_name":"stomatal lineage progression","termid":"GO:0010440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"guard mother cell differentiation","termid":"GO:0010444"}


id: GO:0005160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transforming growth factor beta receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"transforming growth factor beta receptor binding","synonyms":[{"name":"TGF-beta receptor binding","type":"exact"},{"name":"TGFbeta receptor binding","type":"exact"},{"name":"activin","type":"related"},{"name":"inhibin","type":"related"},{"name":"transforming growth factor beta","type":"narrow"},{"name":"transforming growth factor beta ligand binding to type I receptor","type":"related"},{"name":"transforming growth factor beta ligand binding to type II receptor","type":"related"},{"name":"transforming growth factor beta receptor anchoring activity","type":"related"},{"name":"transforming growth factor beta receptor ligand","type":"narrow"}],"termid":"GO:0005160"}


id: MONDO:0006028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the caecum","direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenocarcinoma","termid":"MONDO:0002271"},{"relation_name":"is_a","term_name":"cecum carcinoma","termid":"MONDO:0006029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"cecum adenocarcinoma","secondary_identifiers":["MEDGEN:234098","UMLS:C1332866","NCIT:C5543","SCTID:413446001","EFO:1000020","DOID:3039"],"synonyms":[{"name":"adenocarcinoma of cecum","type":"exact"},{"name":"adenocarcinoma of the cecum","type":"exact"},{"name":"caecum adenocarcinoma","type":"exact"},{"name":"cecal adenocarcinoma","type":"exact"},{"name":"cecum adenocarcinoma","type":"exact"}],"termid":"MONDO:0006028","xrefs":{"Monarch":{"xref_id":"0006028"}}}


id: PBO:0017632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E4 Ufd2 (predicted)","termid":"PBO:0017632"}


id: PBO:0075214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin gamma 2","termid":"PBO:0075214"}


id: MONDO:0024340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroblastoma arising from the retina.","definition_xrefs":["NCIT:C6956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblastoma","termid":"MONDO:0005072"},{"relation_name":"is_a","term_name":"retina neoplasm","termid":"MONDO:0021231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal neuroblastoma","secondary_identifiers":["MEDGEN:1830429","UMLS:C5779888"],"synonyms":[{"name":"neuroblastoma of retina","type":"exact"},{"name":"neuroblastoma of the retina","type":"exact"},{"name":"retina neuroblastoma","type":"exact"},{"name":"retinal neuroblastoma","type":"exact"}],"termid":"MONDO:0024340","xrefs":{"Monarch":{"xref_id":"0024340"}}}


id: MONDO:0004485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the heart characterized by infiltration of the interstitial tissues by inflammatory cells, histiocytes, and the formation of granulomas. Giant cells are often present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mediastinitis","termid":"MONDO:0004492"},{"relation_name":"is_a","term_name":"myocarditis","termid":"MONDO:0004496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"interstitial myocarditis","secondary_identifiers":["SCTID:37925008","UMLS:C0027060","DOID:817","MEDGEN:44554","NCIT:C35786"],"termid":"MONDO:0004485","xrefs":{"Monarch":{"xref_id":"0004485"}}}


id: PBO:0110030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP144 pseudogene 2","termid":"PBO:0110030"}


id: PBO:0111873
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nedd4/Rsp5 family","termid":"PBO:0111873"}


id: GO:0048731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an organismal system over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.","definition_xrefs":["GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"system development","termid":"GO:0048731"}


id: MOD:01621
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two or more amino acid residues by forming an adduct with a compound containing a flavin group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"flavin modified residue","termid":"MOD:00697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin crosslinked residues","termid":"MOD:01621"}


id: PBO:0062894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacid CoA-transferase 1","termid":"PBO:0062894"}


id: FYPO:0001558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of methionine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import","termid":"FYPO:0001058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased methionine import","synonyms":[{"name":"decreased L-methionine import","type":"exact"},{"name":"decreased L-methionine import across plasma membrane","type":"exact"},{"name":"decreased methionine import into cell","type":"exact"},{"name":"decreased methionine transport into cell","type":"exact"},{"name":"decreased methionine uptake","type":"exact"},{"name":"reduced methionine import","type":"exact"},{"name":"reduced methionine uptake","type":"exact"}],"termid":"FYPO:0001558"}


id: PBO:0060813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nebulin","termid":"PBO:0060813"}


id: GO:2001170
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ATP biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide biosynthetic process","termid":"GO:1900372"},{"relation_name":"is_a","term_name":"negative regulation of ATP metabolic process","termid":"GO:1903579"},{"relation_name":"is_a","term_name":"regulation of ATP biosynthetic process","termid":"GO:2001169"},{"relation_name":"negatively_regulates","term_name":"ATP biosynthetic process","termid":"GO:0006754"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"negative regulation of ATP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of ATP anabolism","type":"exact"},{"name":"negative regulation of ATP biosynthesis","type":"exact"},{"name":"negative regulation of ATP formation","type":"exact"},{"name":"negative regulation of ATP regeneration","type":"related"},{"name":"negative regulation of ATP synthesis","type":"exact"}],"termid":"GO:2001170","terms_by_termid":{"GO:1905707":null}}


id: PBO:0031807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_passage_through_START_of_mitotic_cell_cycle","termid":"PBO:0031807"}


id: PBO:0089801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S11","termid":"PBO:0089801"}


id: MONDO:0011432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharophimosis - intellectual disability syndrome","termid":"MONDO:0017393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blepharophimosis - intellectual disability syndrome, Verloes type","secondary_identifiers":["OMIM:604314","Orphanet:293725","MEDGEN:347661","MESH:C565797","GARD:17342","UMLS:C1858538"],"synonyms":[{"name":"BMRS type V","type":"exact"},{"name":"BMRS, Verloes type","type":"exact"},{"name":"blepharophimosis with facial and genital anomalies and intellectual disability","type":"related"},{"name":"blepharophimosis with facial and genital anomalies and mental retardation","type":"related"},{"name":"blepharophimosis-intellectual disability syndrome type V","type":"exact"},{"name":"blepharophimosis-intellectual disability syndrome, Verloes type","type":"related"},{"name":"blepharophimosis-mental retardation syndrome, Verloes type","type":"related"}],"termid":"MONDO:0011432","xrefs":{"Monarch":{"xref_id":"0011432"}}}


id: GO:0160034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Toll receptor ligand protein activation cascade.","definition_xrefs":["PMID:23632253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Toll receptor ligand protein activation cascade","termid":"GO:0160033"},{"relation_name":"is_a","term_name":"positive regulation of protein activation cascade","termid":"GO:2000259"},{"relation_name":"positively_regulates","term_name":"Toll receptor ligand protein activation cascade","termid":"GO:0160032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Toll receptor ligand protein activation cascade","termid":"GO:0160034"}


id: PBO:0041195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUB3 mitotic checkpoint protein pseudogene 1","termid":"PBO:0041195"}


id: MOD:00373
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links L-tyrosine residues with an ether bond to form 3'-(O4'-L-tyrosinyl)-L-tyrosine.","definition_xrefs":["PubMed:12719529","RESID:AA0368","PubMed:7115340","PubMed:8702710","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(O4'-L-tyrosinyl)-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-[3-(4-[(2S)-2-amino-2-carboxyethyl]phenoxy)-4-hydroxyphenyl]propanoic acid","type":"exact"},{"name":"2-amino-3-[4-(5-[(2S)-2-amino-2-carboxyethyl]-2-hydroxyphenoxy)phenyl]propanoic acid","type":"exact"},{"name":"3'-(L-tyros-O4'-yl)-L-tyrosine","type":"exact"},{"name":"CROSSLNK Isodityrosine (Tyr-Tyr)","type":"exact"},{"name":"IsodiTyr (Crosslink)","type":"exact"},{"name":"O-(5-(2-amino-2-carboxyethyl)-2-hydroxyphenyl)-L-tyrosine","type":"exact"},{"name":"isodityrosine","type":"exact"}],"termid":"MOD:00373"}


id: PBO:0055658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3098","termid":"PBO:0055658"}


id: PBO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope protein Brr6/Brl1","termid":"PBO:0001776"}


id: PBO:0085134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein required for 60S ribosomal subunit biogenesis","termid":"PBO:0085134"}


id: PBO:0077152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain containing 3A","termid":"PBO:0077152"}


id: PBO:0069174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 428, pseudogene","termid":"PBO:0069174"}


id: PBO:0005825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrilase family protein, omega-amidase related (predicted)","termid":"PBO:0005825"}


id: GO:0014824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the artery. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The artery is a vessel carrying blood away from the heart.","definition_xrefs":["MA:0000708","MSH:D001158","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonic smooth muscle contraction","termid":"GO:0014820"},{"relation_name":"is_a","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"artery smooth muscle contraction","termid":"GO:0014824"}


id: FYPO:0001575
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119400,119412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004481"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which vegetative cell population growth does not occur, although cells remain viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"abolished vegetative cell population growth","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta"],"synonyms":[{"name":"abolished growth of population of viable vegetative cells","type":"exact"},{"name":"abolished vegetative cell population growth, viable cells","type":"exact"},{"name":"vegetative cell population growth abolished","type":"exact"},{"name":"vegetative population growth abolished","type":"exact"}],"termid":"FYPO:0001575","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0004481":null}}


id: PBO:0026764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuolar_morphology_during_nitrogen_starvation","termid":"PBO:0026764"}


id: PR:O94623
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein REV1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11076:SF13","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rev1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.01c","secondary_identifiers":["UniProtKB:O94623"],"synonyms":[{"name":"SPBC1347.01c","type":"related"},{"name":"Spom972h-REV1","type":"exact"},{"name":"reversionless protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94623"}


id: FYPO:0002664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more messenger RNAs that are normally expressed during a cellular response to stress measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"altered level of stress responsive gene mRNA during vegetative growth","termid":"FYPO:0004363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased level of stress responsive gene mRNA during vegetative growth","synonyms":[{"name":"increased level of cellular response to stress responsive gene mRNA","type":"exact"},{"name":"increased level of stress response gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of stress responsive gene RNA during vegetative growth","type":"exact"},{"name":"increased level of stress responsive gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of stress responsive gene transcripts during vegetative growth","type":"exact"},{"name":"increased mRNA level of stress responsive genes during vegetative growth","type":"exact"},{"name":"increased stress responsive gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0002664"}


id: PBO:0044503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich transmembrane module containing 1","termid":"PBO:0044503"}


id: GO:0031115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of microtubule polymerization or depolymerization","termid":"GO:0031111"},{"relation_name":"is_a","term_name":"regulation of microtubule polymerization","termid":"GO:0031113"},{"relation_name":"is_a","term_name":"negative regulation of protein polymerization","termid":"GO:0032272"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"microtubule polymerization","termid":"GO:0046785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0065003","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"negative regulation of microtubule polymerization","synonyms":[{"name":"down regulation of microtubule polymerization","type":"exact"},{"name":"down-regulation of microtubule polymerization","type":"exact"},{"name":"downregulation of microtubule polymerization","type":"exact"},{"name":"inhibition of microtubule polymerization","type":"narrow"}],"termid":"GO:0031115"}


id: GO:1990671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi medial cisterna. This can involve anterograde or retrograde transport vesicles.","definition_xrefs":["PMID:24119662","PMID:16038056","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"vesicle fusion with Golgi medial cisterna membrane","termid":"GO:1990671"}


id: MONDO:0024456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An iridogoniodysgenesis that results from alterations in the forkhead transcription factor gene (FOXC1)","direct_ancestors":[{"relation_name":"is_a","term_name":"iris disorder","termid":"MONDO:0002289"},{"relation_name":"is_a","term_name":"hereditary glaucoma","termid":"MONDO:0018174"},{"relation_name":"is_a","term_name":"FOXC1-related anterior segment dysgenesis","termid":"MONDO:0100235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior segment dysgenesis 3","secondary_identifiers":["OMIM:601631","GARD:2978","UMLS:C1866560","MEDGEN:355748","DOID:0080608","MESH:C535535"],"synonyms":[{"name":"ASGD3","type":"exact"},{"name":"FOXC1 iridogoniodysgenesis","type":"exact"},{"name":"IGDA","type":"exact"},{"name":"IGDA syndrome","type":"exact"},{"name":"IRID1","type":"exact"},{"name":"anterior segment dysgenesis 3","type":"exact"},{"name":"anterior segment dysgenesis 3, multiple subtypes","type":"exact"},{"name":"glaucoma iridogoniodysgenesia","type":"related"},{"name":"glaucoma iridogoniodysplasia, familial","type":"related"},{"name":"iridogoniodysgenesis anomaly, autosomal dominant","type":"exact"},{"name":"iridogoniodysgenesis caused by mutation in FOXC1","type":"exact"},{"name":"iridogoniodysgenesis type 1","type":"exact"},{"name":"iridogoniodysgenesis, type 1","type":"exact"},{"name":"iris hypoplasia with glaucoma","type":"related"}],"termid":"MONDO:0024456","xrefs":{"Monarch":{"xref_id":"0024456"}}}


id: PBO:0001350
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rhp57delta double mutant produced each recombination class (gene conversion, crossover and long tract gene conversion) at frequencies similar to that of the rhp51delta single mutant","termid":"PBO:0001350"}


id: GO:0045103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that depends upon or alters the intermediate filament cytoskeleton, that part of the cytoskeleton comprising intermediate filaments and their associated proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate filament-based process","termid":"GO:0045103"}


id: PBO:0062535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily A member 4","termid":"PBO:0062535"}


id: PBO:0028793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_centromeric_outer_repeat_transcript_level","termid":"PBO:0028793"}


id: GO:0005685
data:
  {"annotated_genes":["SJAG_01654","SJAG_01870","SJAG_05009","SJAG_00058","SJAG_02279","SJAG_01440","SJAG_03469","SJAG_04214","SJAG_02304","SJAG_00474","SJAG_01015","SJAG_02843","SJAG_04163","SJAG_00147","SJAG_01301","SJAG_03983","SJAG_04911"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70400,70818,73068,73503,74404,74485,76037,77053,77160,77450,79679,79909,94340,103023,107257,112673,113582],"is_not":false,"summary":null,"term":"GO:0005685"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U1, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U1 snRNP, most of which remain associated with the U1 snRNA both while the U1 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["GOC:mah","ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00474":null,"SJAG_01015":null,"SJAG_01301":null,"SJAG_01440":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02843":null,"SJAG_03469":null,"SJAG_03983":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04911":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U1 snRNP","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"snRNP U1","type":"exact"}],"termid":"GO:0005685","terms_by_termid":{"GO:0005685":null}}


id: GO:0002099
data:
  {"annotated_genes":["SJAG_06284","SJAG_02179","SJAG_00683","SJAG_01781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90020,96128,98911,98912],"is_not":false,"summary":null,"term":"GO:0002099"}]},"cv_name":"biological_process","definition":"The process in which a guanine in t position 34 of a tRNA is post-transcriptionally modified.","definition_xrefs":["ISBN:155581073X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble base modification","termid":"GO:0002097"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00683":null,"SJAG_01781":null,"SJAG_02179":null,"SJAG_06284":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA wobble guanine modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002099","terms_by_termid":{"GO:0002099":null}}


id: PBO:0027426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_double-strand_break_repair_junction_in_presence_of_persistent_double-strand_breaks","termid":"PBO:0027426"}


id: PBO:0075981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 5B","termid":"PBO:0075981"}


id: GO:0008155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete larval behavior (sensu Drosophila) (obsolete GO:0008155)","synonyms":[{"name":"larval behavior (sensu Drosophila)","type":"exact"}],"termid":"GO:0008155"}


id: PR:Q9Y814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- htd2 gene.","definition_xrefs":["UniProtKB:Q9Y814","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-thioester dehydratase type 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.15c","synonyms":[{"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-htd2","type":"exact"}],"termid":"PR:Q9Y814"}


id: MOD:01866
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6-amino hydrogen atom of a lysine residue with the Applied Biosystems mTRAQ light reporter+balance group.","definition_xrefs":["OMSSA:209","Unimod:888#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mTRAQ light reporter+balance reagent acylated residue","termid":"MOD:01864"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"mTRAQ light reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"mTRAQ light","type":"related"},{"name":"mTRAQ light on K","type":"exact"}],"termid":"MOD:01866"}


id: PBO:0050237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 15","termid":"PBO:0050237"}


id: PR:Q9USS8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USS8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.02c","synonyms":[{"name":"Spom972h-SPBC4.02c","type":"exact"}],"termid":"PR:Q9USS8"}


id: FYPO:0000523
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which peroxisomal transport does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peroxisomal transport","termid":"FYPO:0000522"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished peroxisomal transport","synonyms":[{"name":"abolished peroxisomal transport during mitotic cell cycle","type":"related"},{"name":"absent peroxisomal transport","type":"exact"},{"name":"peroxisomal transport abolished","type":"exact"},{"name":"peroxisomal transport abolished during vegetative growth","type":"exact"},{"name":"peroxisomal transport: absent","type":"related"}],"termid":"FYPO:0000523"}


id: MOD:00672
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with an acylsulfanyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-acylated residue","synonyms":[{"name":"SAcylRes","type":"exact"}],"termid":"MOD:00672"}


id: PBO:0029010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromosome_during_vegetative_growth","termid":"PBO:0029010"}


id: GO:0034255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving urea.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of nitrogen cycle metabolic process","termid":"GO:1903314"},{"relation_name":"regulates","term_name":"urea metabolic process","termid":"GO:0019627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0071941","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of urea metabolic process","synonyms":[{"name":"regulation of urea metabolism","type":"exact"}],"termid":"GO:0034255"}


id: PBO:0090467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd5","termid":"PBO:0090467"}


id: PBO:0036524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase Ura6","termid":"PBO:0036524"}


id: PBO:0044702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 Y-linked","termid":"PBO:0044702"}


id: PBO:0078607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 61","termid":"PBO:0078607"}


id: GO:0019301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of rhamnose, the hexose 6-deoxy-L-mannose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnose metabolic process","termid":"GO:0019299"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"rhamnose catabolic process","secondary_identifiers":["MetaCyc:RHAMCAT-PWY"],"synonyms":[{"name":"rhamnose breakdown","type":"exact"},{"name":"rhamnose catabolism","type":"exact"},{"name":"rhamnose degradation","type":"exact"}],"termid":"GO:0019301"}


id: PBO:0054492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1892","termid":"PBO:0054492"}


id: PR:P87245
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kms1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyogamy meiotic segregation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.05c","synonyms":[{"name":"Spom972h-kms1","type":"exact"}],"termid":"PR:P87245"}


id: GO:0098850
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the synaptic vesicle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"synaptic vesicle membrane","termid":"GO:0030672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"extrinsic component of synaptic vesicle membrane","termid":"GO:0098850"}


id: GO:0060608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell along the edges of two epithelial folds, giving rise to the lumen of the neural tube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion involved in sealing an epithelial fold","termid":"GO:0060607"},{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-cell adhesion involved in neural tube closure","termid":"GO:0060608"}


id: FYPO:0008201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell enters the meiotic cell cycle normally: i.e after conjugation with cellular fusion and karyogamy with nuclear fusion.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic cell cycle entry","termid":"FYPO:0008201"}


id: MONDO:0008051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tubular aggregate myopathy is a disorder that affects the skeletal muscles. Signs and symptoms typically begin in childhood and worsen over time. The leg muscles are most often affected, but the arm muscles may also be involved. Symptoms include muscle pain, cramping, weakness or stiffness; and exercise-induced muscle fatigue. Affected individuals may have an unusual walking style (gait) or difficulty running, climbing stairs, or getting up from a squatting position. Some individuals develop contractures. This condition may be caused by mutations in the STIM1 or ORAI1 genes. It is usually inherited in an autosomal dominant manner, but autosomal recessive inheritance has also been reported.","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"tubular aggregate myopathy","secondary_identifiers":["MEDGEN:98050","UMLS:C0410207","OMIMPS:160565","DOID:0080089","GARD:3884","Orphanet:2593"],"synonyms":[{"name":"TAM1","type":"related"},{"name":"myopathy, tubular aggregate, 1","type":"related"},{"name":"myopathy, tubular aggregate, type 1","type":"exact"},{"name":"tubular aggregate myopathy","type":"exact"}],"termid":"MONDO:0008051","xrefs":{"Monarch":{"xref_id":"0008051"}}}


id: PBO:0073560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHC adaptor protein 3","termid":"PBO:0073560"}


id: MONDO:0008668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 1 von Willebrand disease (type 1 VWD) is a form of VWD characterized by a bleeding disorder associated with a partial quantitative plasmatic deficiency of an otherwise structurally and functionally normal Willebrand factor (von Willebrand factor; VWF).","definition_xrefs":["Orphanet:166078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary von Willebrand disease","termid":"MONDO:0019565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"von Willebrand disease 1","secondary_identifiers":["DOID:0060573","MEDGEN:220393","GARD:17019","MESH:D056725","NCIT:C131685","OMIM:193400","SCTID:128106003","UMLS:C1264039"],"synonyms":[{"name":"VON WILLEBRAND disease, type 1","type":"related"},{"name":"VWD type 1","type":"exact"},{"name":"VWD, type 1","type":"related"},{"name":"VWD1","type":"exact"},{"name":"Von Willebrand disease, type 1","type":"related"},{"name":"von Willebrand disease 1","type":"exact"},{"name":"von Willebrand disease type 1","type":"exact"},{"name":"von Willebrand disease type I","type":"exact"},{"name":"von Willebrand's disease type 1","type":"exact"},{"name":"von willebrand's disease 1","type":"exact"}],"termid":"MONDO:0008668","xrefs":{"Monarch":{"xref_id":"0008668"}}}


id: GO:1901726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone deacetylase activity.","definition_xrefs":["GOC:BHF","PMID:20497126","GOC:TermGenie","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deacetylase activity (obsolete GO:1901726)","synonyms":[{"name":"down regulation of histone deacetylase activity","type":"exact"},{"name":"down-regulation of histone deacetylase activity","type":"exact"},{"name":"downregulation of histone deacetylase activity","type":"exact"},{"name":"inhibition of histone deacetylase activity","type":"narrow"}],"termid":"GO:1901726"}


id: PBO:0070219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 152 pseudogene","termid":"PBO:0070219"}


id: PR:O13940
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A low specificity L-threonine aldolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low-specificity L-threonine aldolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.09c","secondary_identifiers":["UniProtKB:O13940"],"synonyms":[{"name":"Spom972h-ltaE","type":"exact"}],"termid":"PR:O13940"}


id: MONDO:0957534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukoencephalopathy, megalencephalic","termid":"MONDO:0000137"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megalencephalic leukoencephalopathy with subcortical cysts 4, remitting","secondary_identifiers":["MEDGEN:1841264","OMIM:620448","UMLS:C5830628"],"termid":"MONDO:0957534","xrefs":{"Monarch":{"xref_id":"0957534"}}}


id: PBO:0091137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L30","termid":"PBO:0091137"}


id: MONDO:0030491
data:
  {"annotated_genes":["SJAG_03193"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86405],"is_not":false,"summary":null,"term":"MONDO:0030491"}]},"cv_name":"mondo","definition":"An autosomal recessive immunodeficiency caused by a variation in the ZNFX1 gene, characterized by severe infections by both RNA and DNA viruses and virally triggered inflammatory episodes with hemophagocytic lymphohistiocytosis-like disease, early-onset seizures, and renal and lung disease.","definition_xrefs":["PMID:33872655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 91 and hyperinflammation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5562073","MEDGEN:1794283","OMIM:619644"],"synonyms":[{"name":"IMD91","type":"exact"},{"name":"immunodeficiency, autosomal recessive, due to ZNFX1 deficiency:","type":"exact"}],"termid":"MONDO:0030491","terms_by_termid":{"MONDO:0030491":null},"xrefs":{"Monarch":{"xref_id":"0030491"}}}


id: GO:0004306
data:
  {"annotated_genes":["SJAG_04628"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75731],"is_not":false,"summary":null,"term":"GO:0004306"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + ethanolamine phosphate = diphosphate + CDP-ethanolamine.","definition_xrefs":["EC:2.7.7.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"ethanolamine-phosphate cytidylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1483190","MetaCyc:2.7.7.14-RXN","RHEA:24592"],"synonyms":[{"name":"CTP-phosphoethanolamine cytidylyltransferase activity","type":"related"},{"name":"CTP:ethanolamine-phosphate cytidylyltransferase activity","type":"exact"},{"name":"CTP:phosphoethanolamine cytidylyltransferase activity","type":"related"},{"name":"ET","type":"related"},{"name":"ethanolamine phosphate cytidylyltransferase activity","type":"related"},{"name":"phosphoethanolamine cytidylyltransferase activity","type":"exact"},{"name":"phosphorylethanolamine transferase activity","type":"broad"}],"termid":"GO:0004306","terms_by_termid":{"GO:0004306":null}}


id: GO:0047829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-nopaline + NADP+ + H2O = L-arginine + 2-oxoglutarate + NADPH + H+.","definition_xrefs":["RHEA:19637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-nopaline dehydrogenase activity","secondary_identifiers":["EC:1.5.1.19","MetaCyc:D-NOPALINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"2-N-(D-1,3-dicarboxypropyl)-L-arginine:NADP+ oxidoreductase (L-arginine-forming)","type":"related"},{"name":"D-nopaline synthase activity","type":"related"},{"name":"N2-(D-1,3-dicarboxypropyl)-L-arginine:NADP+ oxidoreductase (L-arginine-forming)","type":"related"},{"name":"NOS activity","type":"related"},{"name":"nopaline dehydrogenase activity","type":"related"},{"name":"nopaline synthase activity","type":"related"}],"termid":"GO:0047829"}


id: MONDO:0035511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder due to poisoning characterized by acute onset of potentially life-threatening illness following ingestion, inhalation, or injection of ricin, a lectin present in the seeds of <i>Ricinus communis</i>, the castor oil plant. Clinical presentation depends on the route of administration, inhalation being the most toxic route, followed by oral ingestion. Presenting signs and symptoms include nausea, vomiting, diarrhea, hematemesis, and melena (upon ingestion), cough, wheezing, dyspnea, sore throat, and congestion (upon inhalation), and erythema, induration, blisters, capillary leak syndrome, and localized necrosis (upon injection). The condition can progress to seizures, shock, organ failure, pulmonary edema, and respiratory failure.","definition_xrefs":["Orphanet:570470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ricin poisoning","secondary_identifiers":["GARD:22311","ICD10CM:T62.2"],"termid":"MONDO:0035511","xrefs":{"Monarch":{"xref_id":"0035511"}}}


id: PBO:0045966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"egl-9 family hypoxia-inducible factor 3 pseudogene 1","termid":"PBO:0045966"}


id: GO:0006707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol metabolic process","termid":"GO:0008203"},{"relation_name":"is_a","term_name":"sterol catabolic process","termid":"GO:0016127"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"cholesterol catabolic process","synonyms":[{"name":"cholesterol breakdown","type":"exact"},{"name":"cholesterol catabolism","type":"exact"},{"name":"cholesterol degradation","type":"exact"}],"termid":"GO:0006707"}


id: MONDO:0019794
data:
  {"annotated_genes":["SJAG_03692"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011330"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03692":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"autosomal dominant cerebellar ataxia type IV","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19254","MEDGEN:1842584","Orphanet:94149","UMLS:C5680261"],"synonyms":[{"name":"ADCA4","type":"exact"},{"name":"ADCAIV","type":"exact"},{"name":"autosomal dominant cerebellar ataxia type 4","type":"exact"},{"name":"autosomal dominant cerebellar ataxia type IV","type":"exact"}],"termid":"MONDO:0019794","terms_by_termid":{"MONDO:0011330":null},"xrefs":{"Monarch":{"xref_id":"0019794"}}}


id: MONDO:0001498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by the dilated tortuous veins of the spermatic cord with a marked left-sided predominance. Adverse effect on male fertility occurs when varicocele leads to an increased scrotal (and testicular) temperature and reduced testicular volume.","definition_xrefs":["MESH:D014646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pelvic varices","termid":"MONDO:0004869"},{"relation_name":"is_a","term_name":"scrotal disorder","termid":"MONDO:0045003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"varicocele","secondary_identifiers":["DOID:12337","ICD9:456.4","UMLS:C0042341","MEDGEN:22619","SCTID:46871008","ICD10CM:I86.1"],"synonyms":[{"name":"scrotal varices","type":"exact"},{"name":"scrotum varicose disease","type":"exact"},{"name":"varicose disease of scrotum","type":"exact"}],"termid":"MONDO:0001498","xrefs":{"Monarch":{"xref_id":"0001498"}}}


id: PBO:0086718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene; expression directly regulated by the metabolic and meiotic transcriptional regulator Ume6p","termid":"PBO:0086718"}


id: GO:0019255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucose 1-phosphate, a monophosphorylated derivative of glucose with the phosphate group attached to C-1.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucose 1-phosphate metabolic process","secondary_identifiers":["MetaCyc:GLUCOSE1PMETAB-PWY","GO:0006008"],"synonyms":[{"name":"glucose 1-phosphate metabolism","type":"exact"},{"name":"glucose 1-phosphate utilization","type":"related"}],"termid":"GO:0019255"}


id: MOD:00874
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to isoglutamyl glutamyl-glutamyl-glutamic acid, forming an isopeptide bond with a triglutamic acid.","definition_xrefs":["PubMed:10747868","Unimod:452","RESID:AA0202#var","DeltaMass:0","PubMed:1680872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-isoglutamyl-polyglutamic acid","termid":"MOD:00207"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoglutamyl triglutamic acid","synonyms":[{"name":"GluGluGlu","type":"related"},{"name":"N alpha -(gamma-Glutamyl)-Glu3","type":"exact"},{"name":"triglutamyl","type":"related"}],"termid":"MOD:00874"}


id: GO:0080016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (-)-E-beta-caryophyllene + diphosphate.","definition_xrefs":["MetaCyc:RXN-8414","PMID:9442047","PMID:12566586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829","GO:0009975"],"is_obsolete":false,"name":"(-)-E-beta-caryophyllene synthase activity","secondary_identifiers":["RHEA:28294","EC:4.2.3.57"],"termid":"GO:0080016"}


id: PBO:0074086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 3","termid":"PBO:0074086"}


id: PBO:0074143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member B3","termid":"PBO:0074143"}


id: FYPO:0007165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex does not occur during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to cell cortex during meiotic cell cycle","synonyms":[{"name":"protein absent from cell cortex during meiotic cell cycle","type":"related"},{"name":"protein localization to cell cortex abolished during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0007165"}


id: MONDO:0002963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm of the skin. It presents as a papular or nodular lesion. Morphologically, it is characterized by the presence of hyperkeratosis, acanthosis, papillomatosis, and prominent acantholysis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acanthoma","termid":"MONDO:0002093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acantholytic acanthoma","secondary_identifiers":["DOID:4324","MEDGEN:220970","UMLS:C1301270","NCIT:C27517"],"synonyms":[{"name":"acantholytic acanthoma","type":"exact"}],"termid":"MONDO:0002963","xrefs":{"Monarch":{"xref_id":"0002963"}}}


id: FYPO:0000851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to osmotic stress","synonyms":[{"name":"increased growth during cellular response to osmotic stress","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to osmotic stress","type":"exact"},{"name":"resistance to osmotic stress during mitotic cell cycle","type":"related"},{"name":"resistance to osmotic stress during vegetative growth","type":"exact"},{"name":"resistant to osmotic stress","type":"exact"}],"termid":"FYPO:0000851"}


id: PBO:0059381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 6","termid":"PBO:0059381"}


id: PBO:0067735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 34","termid":"PBO:0067735"}


id: GO:0008268
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor signaling protein tyrosine kinase signaling protein activity (obsolete GO:0008268)","synonyms":[{"name":"receptor signaling protein tyrosine kinase signaling protein activity","type":"exact"},{"name":"receptor signalling protein tyrosine kinase signalling protein activity","type":"exact"}],"termid":"GO:0008268"}


id: PBO:0052766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 58","termid":"PBO:0052766"}


id: GO:1900858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of brevianamide F biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of brevianamide F biosynthetic process (obsolete GO:1900858)","synonyms":[{"name":"regulation of brevianamide F anabolism","type":"exact"},{"name":"regulation of brevianamide F biosynthesis","type":"exact"},{"name":"regulation of brevianamide F formation","type":"exact"},{"name":"regulation of brevianamide F synthesis","type":"exact"}],"termid":"GO:1900858"}


id: MONDO:0008901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tel Hashomer camptodactyly syndrome is a rare syndrome characterized by camptodactyly, muscle hypoplasia and weakness, skeletal anomalies, facial dysmorphism and abnormal dermatoglyphics.","definition_xrefs":["Orphanet:3292","PMID:24171333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tel Hashomer camptodactyly syndrome","secondary_identifiers":["GARD:5128","MEDGEN:347860","MESH:C536953","OMIM:211960","UMLS:C1859356","SCTID:719946008"],"synonyms":[{"name":"Tel Hashomer camptodactyly syndrome","type":"exact"},{"name":"camptodactyly with muscular hypoplasia, skeletal dysplasia, and abnormal palmar creases","type":"related"}],"termid":"MONDO:0008901","xrefs":{"Monarch":{"xref_id":"0008901"}}}


id: PBO:0001145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kar3 subfamily","termid":"PBO:0001145"}


id: PBO:0065715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PVR related immunoglobulin domain containing 2, pseudogene","termid":"PBO:0065715"}


id: FYPO:0000661
data:
  {"alleles_by_uniquename":{"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007363"}]},"cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other catalytic property of a specified catalytic activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity phenotype","termid":"FYPO:0000654"},{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":1,"genotypes_by_uniquename":{"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal catalytic activity","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_02796"],"single_locus_genotype_uniquenames":["pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0000661","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0007363":null,"FYPO_EXT:0000002":null}}


id: PBO:0005121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding involved in ER to Golgi vesicle transport (predicted)","termid":"PBO:0005121"}


id: PBO:0089709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP3 subunit Alp6","termid":"PBO:0089709"}


id: GO:0140970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the AIM2 inflammasome complex.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"AIM2 inflammasome complex assembly","termid":"GO:0140970"}


id: PBO:0001178
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.17","termid":"PBO:0001178"}


id: GO:0044310
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded vesicle found predominantly in Plasmodium female gametocytes, that becomes progressively more abundant as the gametocyte reaches full maturity. These vesicles lie beneath the subpellicular membrane of the gametocyte, and the release of their contents into the parasitophorous vacuole has been postulated to aid in the escape of gametocytes from the erythrocyte after ingestion by the mosquito.","definition_xrefs":["PMID:18086189","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"osmiophilic body","termid":"GO:0044310"}


id: PBO:0004183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras1 guanyl-nucleotide exchange factor Efc25","termid":"PBO:0004183"}


id: PBO:0055424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2854","termid":"PBO:0055424"}


id: MONDO:0004753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"strabismus","termid":"MONDO:0003432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mechanical strabismus","secondary_identifiers":["ICD10CM:H50.6","MEDGEN:101828","DOID:9306","ICD9:378.6","UMLS:C0152223","icd11.foundation:230827382","ICD9:378.60","SCTID:5371001"],"termid":"MONDO:0004753","xrefs":{"Monarch":{"xref_id":"0004753"}}}


id: PBO:0028404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ubiquinone_binding","termid":"PBO:0028404"}


id: GO:0044751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a human chorionic gonadotropin stimulus.","definition_xrefs":["PMID:21325635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to human chorionic gonadotropin","termid":"GO:0044752"},{"relation_name":"is_a","term_name":"cellular response to gonadotropin stimulus","termid":"GO:0071371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to human chorionic gonadotropin stimulus","synonyms":[{"name":"cellular response to human chorionic gonadotrophin stimulus","type":"exact"}],"termid":"GO:0044751"}


id: PBO:0029301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_substance_in_cell_during_G0","termid":"PBO:0029301"}


id: MONDO:0010728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by the association of skeletal abnormalities, cutis laxa, craniostenosis, ambiguous genitalia, psychomotor retardation and facial abnormalities. So far, it has been described in two males (maternal first cousins). The mode of inheritance was suggested to be X-linked recessive.","definition_xrefs":["Orphanet:3134"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"inherited cutis laxa","termid":"MONDO:0100237"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCARF syndrome","secondary_identifiers":["OMIM:312830","GARD:247","icd11.foundation:1075253748","MESH:C536625","MEDGEN:326461","UMLS:C1839321","SCTID:734173003"],"synonyms":[{"name":"SCARF syndrome","type":"exact"},{"name":"skeletal abnormalities, cutis laxa, craniostenosis, ambiguous genitalia, retardation, and Facial abnormalities","type":"related"}],"termid":"MONDO:0010728","xrefs":{"Monarch":{"xref_id":"0010728"}}}


id: PBO:0052448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 3","termid":"PBO:0052448"}


id: GO:0061965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of the dormancy process that results in entry into reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["PMID:27689881","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of entry into reproductive diapause","termid":"GO:0061963"},{"relation_name":"positively_regulates","term_name":"entry into reproductive diapause","termid":"GO:0055116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of entry into reproductive diapause","termid":"GO:0061965"}


id: PBO:0057241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 432","termid":"PBO:0057241"}


id: PATO:0001354
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A optical quality inhering in a bearer by virtue of the bearer's exhibiting low opacity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opacity","termid":"PATO:0000957"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translucent","termid":"PATO:0001354"}


id: PBO:0001583
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.2.5","termid":"PBO:0001583"}


id: PBO:0057628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1203","termid":"PBO:0057628"}


id: MONDO:0005395
data:
  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id: FYECO:0000330
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id: PBO:0004459
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein (predicted)","termid":"PBO:0004459"}


id: PBO:0065960
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id: PBO:0069996
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id: PBO:0088752
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id: PR:000050217
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id: GO:0106091
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id: PBO:0067712
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id: MONDO:0013814
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id: RO:0002574
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id: GO:0062165
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id: MONDO:0100398
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id: MONDO:0004513
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id: MONDO:0012026
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id: PBO:0064018
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id: PBO:0053546
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id: PBO:0062829
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id: GO:0009743
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id: PBO:0066028
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id: PR:P14575
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id: MOD:01933
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links four L-lysine residues to form desmosine.","definition_xrefs":["RESID:AA0587","PubMed:13941623","PubMed:14109938","ChEBI:37629","PubMed:14109939","PubMed:5839176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridinyl ring crosslinked residues","termid":"MOD:01425"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmosine","synonyms":[{"name":"4-[(4S)-4-amino-4-carboxybutyl]-1-[(5S)-5-amino-5-carboxypentyl]-3,5-bis[(3S)-3-amino-3-carboxypropyl]pyridinium","type":"exact"},{"name":"6-[4-(4-amino-4-carboxybutyl)-3,5-bis(3-amino-3-carboxypropyl)pyridinio]norleucine","type":"exact"},{"name":"desmosine","type":"exact"}],"termid":"MOD:01933"}


id: FYPO:0002717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuole fusion is normal (i.e. indistinguishable from wild type) during a cellular response to a hypotonic environment.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vacuole fusion during vegetative growth","termid":"FYPO:0002716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuole fusion during cellular hypotonic response","synonyms":[{"name":"normal homotypic vacuole fusion during cellular hypotonic response","type":"exact"},{"name":"normal vacuole fusion during cellular hypotonic response during mitotic cell cycle","type":"related"},{"name":"normal vacuole fusion during cellular hypotonic response during vegetative growth","type":"exact"},{"name":"normal vacuole fusion during hypotonic stress","type":"exact"},{"name":"normal vacuole fusion, non-autophagic, during cellular hypotonic response","type":"exact"}],"termid":"FYPO:0002717"}


id: GO:0061581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a corneal epithelial cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corneal epithelial cell migration","termid":"GO:0061581"}


id: PBO:0049587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 5, pseudogene","termid":"PBO:0049587"}


id: PBO:0017856
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of PNPG to glucose is 20.3(uM min-1 ml-2)","termid":"PBO:0017856"}


id: GO:0044159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membranous cellular structure within the host cell that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the host plasma membrane. In eukaryotic host cells they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular organelle","termid":"GO:0033647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host thylakoid","termid":"GO:0044159"}


id: PBO:0051122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-9 (non-functional)","termid":"PBO:0051122"}


id: MONDO:0007070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adiposis dolorosa or Dercum's disease is characterized by the development of multiple, painful, subcutaneous lipomas in association with obesity, asthenia and fatigue, and range of mental disturbances including instability, depression, confusion, dementia and epilepsy.","definition_xrefs":["Orphanet:36397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system benign neoplasm","termid":"MONDO:0000652"},{"relation_name":"is_a","term_name":"lipomatosis","termid":"MONDO:0006574"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adiposis dolorosa","secondary_identifiers":["NCIT:C84540","OMIM:103200","EFO:1000667","ICD9:272.8","NORD:1046","MESH:D000274","UMLS:C0001529","DOID:3928","MedDRA:10001294","GARD:5750","MEDGEN:1757","SCTID:71404003","Wikipedia:Adiposis_dolorosa"],"synonyms":[{"name":"Adiposalgia","type":"exact"},{"name":"Dercum disease","type":"exact"},{"name":"Dercum's Disease","type":"exact"},{"name":"Dercum's disease","type":"exact"},{"name":"Neurolipomatosis","type":"exact"},{"name":"adipose tissue rheumatism","type":"exact"},{"name":"adiposis dolorosa","type":"exact"},{"name":"lipomatosis dolorosa","type":"exact"}],"termid":"MONDO:0007070","xrefs":{"Monarch":{"xref_id":"0007070"}}}


id: PBO:0046758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXOG pseudogene 1","termid":"PBO:0046758"}


id: SO:0001030
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Forward is an attribute of the feature, where the feature is in the 5' to 3' direction.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction_attribute","termid":"SO:0001029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forward","termid":"SO:0001030"}


id: PBO:0072322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 8","termid":"PBO:0072322"}


id: PBO:0064109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKD1 antisense RNA 1","termid":"PBO:0064109"}


id: PBO:0036392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter Mfs3","termid":"PBO:0036392"}


id: PBO:0034425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_dependent_on_(obsolete_localization_dependent_on)","termid":"PBO:0034425"}


id: PBO:0036050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0036050"}


id: GO:0035264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of an entire multicellular organism, as opposed to cell growth.","definition_xrefs":["GOC:dph","GOC:tb","GOC:bf","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organism growth","synonyms":[{"name":"body growth","type":"related"}],"termid":"GO:0035264"}


id: PBO:0004558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acireductone dioxygenase family (predicted)","termid":"PBO:0004558"}


id: GO:0034959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to the attainment of the full functional capacity of endothelin by conversion of Big-endothelin substrate into mature endothelin.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by endothelin","termid":"GO:0003100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"endothelin maturation","termid":"GO:0034959"}


id: PBO:0070948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 3","termid":"PBO:0070948"}


id: PBO:0044723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 10 (pseudogene)","termid":"PBO:0044723"}


id: GO:0072376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sequential series of modifications to a set of proteins where the product of one reaction catalyzes the following reaction, ultimately leading to the generation of a mature protein. Modifications typically include proteolysis or covalent modification, and may also include binding events.","definition_xrefs":["GOC:mah","GOC:add","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"protein activation cascade","synonyms":[{"name":"protein activation pathway","type":"exact"},{"name":"protein activitory cascade","type":"exact"}],"termid":"GO:0072376"}


id: GO:1900870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tatiopterin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound biosynthetic process","termid":"GO:0042559"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"tatiopterin metabolic process","termid":"GO:1900869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0042559","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tatiopterin biosynthetic process","synonyms":[{"name":"tatiopterin anabolism","type":"exact"},{"name":"tatiopterin biosynthesis","type":"exact"},{"name":"tatiopterin formation","type":"exact"},{"name":"tatiopterin synthesis","type":"exact"}],"termid":"GO:1900870"}


id: GO:0090397
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant cell papilla that is part of a stigma papilla cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant cell papilla","termid":"GO:0090395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stigma papilla","termid":"GO:0090397"}


id: GO:0120211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of proacrosomal vesicle with the membrane of another proacrosomal vesicle to form the acrosome.","definition_xrefs":["PMID:29991750","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"acrosome assembly","termid":"GO:0001675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0061024","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"proacrosomal vesicle fusion","termid":"GO:0120211"}


id: GO:0089720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a caspase family protein.","definition_xrefs":["GOC:ha","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protease binding","termid":"GO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"caspase binding","termid":"GO:0089720"}


id: PBO:0026811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_ethanol","termid":"PBO:0026811"}


id: GO:0035673
data:
  {"annotated_genes":["SJAG_02602","SJAG_00922","SJAG_01983","SJAG_03577","SJAG_01660","SJAG_02139","SJAG_05182"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015421"},{"annotations":[118648,72172,118649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071916"},{"annotations":[95860,113441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034634"},{"annotations":[108295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901584"},{"annotations":[72170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042937"}]},"cv_name":"molecular_function","definition":"Enables the transfer of oligopeptides from one side of a membrane to the other. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["ISBN:0198506732","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00922":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_02139":null,"SJAG_02602":null,"SJAG_03577":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"oligopeptide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015198"],"synonyms":[{"name":"oligopeptide transporter activity","type":"related"}],"termid":"GO:0035673","terms_by_termid":{"GO:0015421":null,"GO:0034634":null,"GO:0042937":null,"GO:0071916":null,"GO:1901584":null}}


id: MONDO:0011664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency due to CD25 deficiency","secondary_identifiers":["MEDGEN:377894","GARD:17049","Orphanet:169100","MESH:C565232","OMIM:606367","icd11.foundation:1705860123","NANDO:2200736","DOID:0111968","UMLS:C1853392"],"synonyms":[{"name":"CD25 deficiency","type":"related"},{"name":"IL2RA deficiency","type":"related"},{"name":"IMD41","type":"related"},{"name":"Interleukin 2 receptor, alpha, deficiency of","type":"related"},{"name":"Interleukin-2 receptor alpha chain deficiency","type":"exact"},{"name":"immunodeficiency 41 with lymphoproliferation and autoimmunity","type":"related"},{"name":"immunodeficiency due to CD25 deficiency","type":"exact"}],"termid":"MONDO:0011664","xrefs":{"Monarch":{"xref_id":"0011664"}}}


id: PBO:0054633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2038","termid":"PBO:0054633"}


id: MONDO:0014374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the CEP83 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"nephronophthisis 18","secondary_identifiers":["DOID:0111125","UMLS:C3890591","MEDGEN:855697","OMIM:615862"],"synonyms":[{"name":"CEP83 nephronophthisis (disease)","type":"exact"},{"name":"NPHP18","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in CEP83","type":"exact"},{"name":"nephronophthisis 18","type":"exact"},{"name":"nephronophthisis type 18","type":"exact"}],"termid":"MONDO:0014374","xrefs":{"Monarch":{"xref_id":"0014374"}}}


id: GO:0001567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + cholesterol + O2 = 25-hydroxycholesterol + A + H2O.","definition_xrefs":["RHEA:21104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cholesterol 25-hydroxylase activity","secondary_identifiers":["EC:1.14.99.38","KEGG_REACTION:R07218","MetaCyc:1.14.99.38-RXN"],"synonyms":[{"name":"cholesterol 25-monooxygenase activity","type":"related"},{"name":"cholesterol,hydrogen-donor:oxygen oxidoreductase (25-hydroxylating) activity","type":"related"}],"termid":"GO:0001567"}


id: MONDO:0004050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma usually arising from the metaphysis of long bones. It is characterized by the presence of a cystic architecture with blood-filled spaces. The prognosis is similar to that of conventional osteosarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"conventional osteosarcoma","termid":"MONDO:0002631"},{"relation_name":"is_a","term_name":"bone osteosarcoma","termid":"MONDO:0002629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"telangiectatic osteogenic sarcoma","secondary_identifiers":["DOID:6951","ICDO:9183/3","NCIT:C3902","MEDGEN:78059","UMLS:C0259782","ONCOTREE:TEOS"],"synonyms":[{"name":"TEOS","type":"related"},{"name":"malignant bone aneurysm","type":"exact"},{"name":"telangiectatic osteosarcoma","type":"exact"},{"name":"telangiectatic osteosarcoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004050","xrefs":{"Monarch":{"xref_id":"0004050"}}}


id: FYECO:0000375
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which streptonigrin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ streptonigrin","termid":"FYECO:0000375"}


id: PBO:0045679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 2 light intermediate chain 1","termid":"PBO:0045679"}


id: GO:0170034
data:
  {"annotated_genes":["SJAG_04042","SJAG_02400","SJAG_02313","SJAG_02791","SJAG_00107","SJAG_04652","SJAG_03152","SJAG_00120","SJAG_04459","SJAG_00396","SJAG_00309","SJAG_00636","SJAG_00495","SJAG_01061","SJAG_04688","SJAG_00695","SJAG_03312","SJAG_00395","SJAG_04577","SJAG_01137","SJAG_02388","SJAG_02689","SJAG_03141","SJAG_03671","SJAG_00248","SJAG_04747","SJAG_04549","SJAG_03457","SJAG_02832","SJAG_01592","SJAG_02841","SJAG_00234","SJAG_01955","SJAG_02505","SJAG_01346","SJAG_03124","SJAG_04449","SJAG_01404","SJAG_02290","SJAG_04425","SJAG_02972","SJAG_03985","SJAG_00502","SJAG_01466","SJAG_00881","SJAG_00635","SJAG_00592","SJAG_03881","SJAG_00830","SJAG_05007","SJAG_03266","SJAG_01455","SJAG_04054","SJAG_04149","SJAG_01630","SJAG_03775","SJAG_00359","SJAG_06635","SJAG_03167","SJAG_03055","SJAG_03614","SJAG_00869","SJAG_03306","SJAG_00392","SJAG_00412","SJAG_04145","SJAG_03562","SJAG_03243","SJAG_03712","SJAG_01461","SJAG_00432","SJAG_01019","SJAG_00660","SJAG_02293","SJAG_01574","SJAG_04098"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106312,111400,68742,65593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[57682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006529"},{"annotations":[78111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[71693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006542"},{"annotations":[102938,112215,111389,118688,78826,70571,110775,98482,106834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[102478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[59835,118037,111542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[57876,71492,60012,76947,78788,64479,80651,76189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"},{"annotations":[110815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[108627,104092,91025,110743,111405,113560,103608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901705"},{"annotations":[75181,91026,59354,80294,103609,113561,77296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"},{"annotations":[78671,78220,79583,77263,58760,80460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[78271,98669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[91224,67525,64673,78261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"},{"annotations":[80047,61080,117210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"},{"annotations":[77555,74590,73644,79586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[58687,77346,76454,64047,80295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009099"},{"annotations":[113756,77825,76443,77016,70505,96691,75413,65078,64435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[64261,71410,64639,74900,76754,72227,112278,79399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[106314,64640,70055,112279,77359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"},{"annotations":[79128,77018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-amino acids, the L-enantiomers of amino acids.","definition_xrefs":["GOC:edw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic 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acid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"L-amino acid anabolism","type":"exact"},{"name":"L-amino acid biosynthesis","type":"exact"},{"name":"L-amino acid formation","type":"exact"},{"name":"L-amino acid synthesis","type":"exact"}],"termid":"GO:0170034","terms_by_termid":{"GO:0000105":null,"GO:0000162":null,"GO:0006529":null,"GO:0006532":null,"GO:0006542":null,"GO:0006564":null,"GO:0006571":null,"GO:0009086":null,"GO:0009088":null,"GO:0009094":null,"GO:0009098":null,"GO:0009099":null,"GO:0019509":null,"GO:0019878":null,"GO:0042450":null,"GO:0055129":null,"GO:0070981":null,"GO:0071266":null,"GO:0071269":null,"GO:0097054":null,"GO:1901705":null}}


id: PBO:0043840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 2 pseudogene 1","termid":"PBO:0043840"}


id: PBO:0088128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein involved in termination of autophagy; regulates autophagy termination during persistent nitrogen starvation through Atg1p-mediated re-phosphorylation of Atg13p and PAS disassembly; type II membrane protein containing a hydrophobic transmembrane region, with N-terminal region oriented toward the cytosol and C-terminus inside the lumen; luminal domain is glycosylated; forms foci in the vacuole membrane during starvation","termid":"PBO:0088128"}


id: PBO:0039378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine monophosphate deaminase 1","termid":"PBO:0039378"}


id: FYECO:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The expression level of the gene was decreased compared to expressing it from its endogenous promoter in the genome.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000008 knockdown (obsolete FYECO:0000008)","termid":"FYECO:0000008"}


id: GO:0070251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + pristanate + CoA = AMP + diphosphate + pristanoyl-CoA.","definition_xrefs":["GOC:pde","PMID:10198260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"pristanate-CoA ligase activity","secondary_identifiers":["Reactome:R-HSA-389632","RHEA:47264"],"synonyms":[{"name":"pristanate:CoA ligase (AMP-forming)","type":"exact"},{"name":"pristanoyl-CoA ligase activity","type":"exact"}],"termid":"GO:0070251"}


id: GO:1904067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ascr#2.","definition_xrefs":["GO_REF:0000067","GOC:TermGenie","PMID:22665789","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ascr#2 binding","termid":"GO:1904067"}


id: GO:0090591
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N-acetyl-mannosamine(out) = protein histidine +N-acetyl- mannosamine-6-phosphate(in).","definition_xrefs":["PMID:9864311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0016740","GO:0003824","GO:0005215"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-N-acetyl-mannosamine phosphotransferase system transporter activity","termid":"GO:0090591"}


id: PBO:0074119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC30A4 antisense RNA 1","termid":"PBO:0074119"}


id: PBO:0077208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 7 superfamily member 2","termid":"PBO:0077208"}


id: PBO:0058293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4667","termid":"PBO:0058293"}


id: PBO:0054077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1427","termid":"PBO:0054077"}


id: GO:0102718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: TRIBOA-beta-D-glucoside + S-adenosyl-L-methionine = (2R)-DIMBOA glucoside + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.241","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"TRIBOA-glucoside methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-6687","RHEA:32099"],"termid":"GO:0102718"}


id: MONDO:0012957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple sclerosis","termid":"MONDO:0005301"},{"relation_name":"is_a","term_name":"multiple sclerosis, susceptibility to","termid":"MONDO:0007462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple sclerosis, susceptibility to, 3","secondary_identifiers":["UMLS:C2675477","OMIM:612595","MEDGEN:390807"],"synonyms":[{"name":"MS3","type":"exact"},{"name":"multiple sclerosis, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0012957","xrefs":{"Monarch":{"xref_id":"0012957"}}}


id: PBO:0045537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual oxidase 1","termid":"PBO:0045537"}


id: GO:0140984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H4 L-lysine (position 12) = S-adenosyl-L-homocysteine + histone H4 N6-methyl-L-lysine (position 12). This reaction is the addition of a methyl group to the lysine residue at position 12 of the histone H4 protein.","definition_xrefs":["PMID:12086618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H4 methyltransferase activity","termid":"GO:0140939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824","GO:0140096","GO:0008276"],"is_obsolete":false,"name":"histone H4K12 methyltransferase activity","synonyms":[{"name":"histone H4 lysine 12-specific methyltransferase activity","type":"exact"},{"name":"histone H4K12 methylase activity","type":"broad"},{"name":"histone H4K12 methylation","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H4-K12 specific)","type":"exact"},{"name":"histone methylase activity (H4-K12 specific)","type":"exact"},{"name":"histone methyltransferase activity (H4-K12 specific)","type":"exact"},{"name":"histone-H4K12 methyltransferase activity","type":"exact"}],"termid":"GO:0140984"}


id: GO:1900554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asperfuranone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"asperfuranone metabolic process","termid":"GO:1900552"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"asperfuranone biosynthetic process","synonyms":[{"name":"asperfuranone anabolism","type":"exact"},{"name":"asperfuranone biosynthesis","type":"exact"},{"name":"asperfuranone formation","type":"exact"},{"name":"asperfuranone synthesis","type":"exact"}],"termid":"GO:1900554"}


id: GO:0140803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteinyl-[protein] + NAD+ = H+ + nicotinamide + S-(ADP-D-ribosyl)-L-cysteinyl-[protein].","definition_xrefs":["RHEA:56612","PMID:25043379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein mono-ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"NAD+-protein-cysteine ADP-ribosyltransferase activity","termid":"GO:0140803"}


id: FYPO:0004896
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more generation of precursor metabolites and energy RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Generation of precursor metabolites and energy RNAs are transcribed from genes whose products are involved in the formation of precursor metabolites and the liberation of energy from these substances.","definition_xrefs":["GO:0006091","PMID:25102102","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased level of generation of precursor metabolites and energy gene mRNA during vegetative growth","synonyms":[{"name":"increased generation of precursor metabolites and energy RNA accumulation during vegetative growth","type":"related"},{"name":"increased level of generation of precursor metabolites and energy RNA during mitotic cell cycle","type":"related"},{"name":"increased level of generation of precursor metabolites and energy gene RNA during vegetative growth","type":"exact"},{"name":"increased level of generation of precursor metabolites and energy transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0004896"}


id: GO:0018076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal lysine of proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-lysine acetylation","termid":"GO:0018394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"N-terminal peptidyl-lysine acetylation","termid":"GO:0018076"}


id: PR:O74774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An HBS1-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1 alpha-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.01","secondary_identifiers":["UniProtKB:O74774"],"synonyms":[{"name":"SPBC25B2.01","type":"related"},{"name":"Spom972h-HBS1L","type":"exact"}],"termid":"PR:O74774"}


id: PBO:0068198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 505","termid":"PBO:0068198"}


id: MONDO:0018254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Isidor type","secondary_identifiers":["UMLS:C5190629","GARD:21586","MEDGEN:1676518","Orphanet:370015"],"termid":"MONDO:0018254","xrefs":{"Monarch":{"xref_id":"0018254"}}}


id: MONDO:1011532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperadrenocorticism that occurs in domestic ferret.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperadrenocorticism, non-human animal","termid":"MONDO:1011403"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperadrenocorticism, domestic ferret","secondary_identifiers":["OMIA:000494-9669"],"termid":"MONDO:1011532","xrefs":{"Monarch":{"xref_id":"1011532"}}}


id: PBO:0085092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear exosome exonuclease component; has 3'-5' exonuclease activity that is regulated by Lrp1p; involved in RNA processing, maturation, surveillance, degradation, tethering, and export; role in sn/snoRNAs precursor degradation; forms a stable heterodimer with Lrp1p; has similarity to E. coli RNase D and to human PM-Sc1 100 (EXOSC10); mutant displays reduced transcription elongation in the G-less-based","termid":"PBO:0085092"}


id: GO:0102058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-leucine + ATP(4-) + a jasmonic acid = AMP(2-) + diphosphoric acid + a jasmonoyl-leucine.","definition_xrefs":["PMID:17291501","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete jasmonoyl-leucine synthetase activity (obsolete GO:0102058)","termid":"GO:0102058"}


id: PBO:0043921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary rootlet coiled-coil, rootletin family member 2","termid":"PBO:0043921"}


id: PBO:0042709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin EGF LAG seven-pass G-type receptor 1","termid":"PBO:0042709"}


id: GO:1990107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-deoxy-D-xylulose 5-phosphate + 2-iminoacetate + [sulfur-carrier protein ThiS]-C-terminal Gly-NH-CH2-C(O)SH = 2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate + [sulfur-carrier protein ThiS]-C-terminal Gly-Gly + 2 H+ + 2 H2O.","definition_xrefs":["PMID:22031445","RHEA:26297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thiazole synthase activity","secondary_identifiers":["EC:2.8.1.10"],"synonyms":[{"name":"1-deoxy-D-xylulose 5-phosphate:thiol sulfurtransferase activity","type":"exact"}],"termid":"GO:1990107"}


id: PBO:0048142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 6","termid":"PBO:0048142"}


id: MONDO:0004833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the thick tissue on the bottom of the foot (plantar fascia) causing heel pain. The plantar fascia (also called plantar aponeurosis) are bands of fibrous tissue extending from the calcaneal tuberosity to the toes. The etiology of plantar fasciitis remains controversial but is likely to involve a biomechanical imbalance. Though often presenting along with heel spur, they do not appear to be causally related.","definition_xrefs":["MESH:D036981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fasciitis","termid":"MONDO:0004830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plantar fasciitis","secondary_identifiers":["DOID:9600","MEDGEN:56201","icd11.foundation:254630809","SCTID:202882003","UMLS:C0149756"],"termid":"MONDO:0004833","xrefs":{"Monarch":{"xref_id":"0004833"}}}


id: FYPO:0002287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to heat is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to heat","synonyms":[{"name":"decreased RNA accumulation during cellular response to heat","type":"related"},{"name":"decreased RNA level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to heat during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to heat shock","type":"narrow"},{"name":"decreased transcript level during cellular response to heat","type":"exact"},{"name":"reduced RNA level during cellular response to heat","type":"exact"}],"termid":"FYPO:0002287"}


id: PBO:0002538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAP family protein (predicted)","termid":"PBO:0002538"}


id: MONDO:0004142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of large cell neuroendocrine lung carcinoma characterized by the presence of large neuroendocrine cells in combination with adenocarcinoma, squamous cell carcinoma, giant cell carcinoma and/ or spindle cell carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary large cell neuroendocrine carcinoma","termid":"MONDO:0003960"},{"relation_name":"is_a","term_name":"combined lung carcinoma","termid":"MONDO:0006167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung combined large cell neuroendocrine carcinoma","secondary_identifiers":["MEDGEN:232386","UMLS:C1333122","NCIT:C7267","DOID:7207"],"synonyms":[{"name":"combined large cell lung neuroendocrine carcinoma","type":"exact"},{"name":"combined large cell neuroendocrine carcinoma of lung","type":"exact"},{"name":"combined large cell neuroendocrine carcinoma of the lung","type":"exact"},{"name":"pulmonary combined large cell neuroendocrine carcinoma","type":"exact"}],"termid":"MONDO:0004142","xrefs":{"Monarch":{"xref_id":"0004142"}}}


id: MONDO:0014616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Skint1-like pseudogene (obsolete MONDO:0014616)","secondary_identifiers":["OMIM:616392"],"synonyms":[{"name":"SKINT1-like pseudogene","type":"related"},{"name":"SKINTL","type":"related"},{"name":"Skint1-like pseudogene","type":"exact"},{"name":"Skint1L","type":"related"},{"name":"Skintp","type":"related"}],"termid":"MONDO:0014616","xrefs":{"Monarch":{"xref_id":"0014616"}}}


id: PBO:0083804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that binds ribosomal protein L11; required for nuclear export of the 60S pre-ribosomal subunit during ribosome biogenesis; localizes to the nucleolus and in foci along nuclear periphery; cooperates with Ebp2p and Mps3p to mediate telomere clustering by binding Sir4p, but is not involved in telomere tethering; mouse homolog shows altered expression in Huntington's disease model mice","termid":"PBO:0083804"}


id: GO:0060289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a compartment boundary. A compartment boundary is a lineage restriction boundary within a developing tissue which does not correspond to some morphological barrier.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"},{"relation_name":"part_of","term_name":"compartment pattern specification","termid":"GO:0007386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compartment boundary maintenance","termid":"GO:0060289"}


id: PBO:0067881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 183","termid":"PBO:0067881"}


id: GO:1901088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of benzylpenicillin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"penicillin biosynthetic process","termid":"GO:0042318"},{"relation_name":"is_a","term_name":"benzylpenicillin metabolic process","termid":"GO:1901086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"benzylpenicillin biosynthetic process","synonyms":[{"name":"benzylpenicillin anabolism","type":"exact"},{"name":"benzylpenicillin biosynthesis","type":"exact"},{"name":"benzylpenicillin formation","type":"exact"},{"name":"benzylpenicillin synthesis","type":"exact"},{"name":"penicillin G anabolism","type":"exact"},{"name":"penicillin G biosynthesis","type":"exact"},{"name":"penicillin G formation","type":"exact"},{"name":"penicillin G synthesis","type":"exact"}],"termid":"GO:1901088"}


id: GO:0046147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol catabolic process","termid":"GO:0034313"},{"relation_name":"is_a","term_name":"pteridine-containing compound catabolic process","termid":"GO:0042560"},{"relation_name":"is_a","term_name":"tetrahydrobiopterin metabolic process","termid":"GO:0046146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tetrahydrobiopterin catabolic process","synonyms":[{"name":"5,6,7,8-tetrahydrobiopterin catabolic process","type":"exact"},{"name":"tetrahydrobiopterin breakdown","type":"exact"},{"name":"tetrahydrobiopterin catabolism","type":"exact"},{"name":"tetrahydrobiopterin degradation","type":"exact"}],"termid":"GO:0046147"}


id: GO:0031798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 metabotropic glutamate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 1 metabotropic glutamate receptor binding","synonyms":[{"name":"type 1 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031798"}


id: PBO:0066574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh blood group D antigen","termid":"PBO:0066574"}


id: GO:1904205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle hypertrophy.","definition_xrefs":["PMID:23470307","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of muscle hypertrophy","termid":"GO:0014741"},{"relation_name":"is_a","term_name":"negative regulation of muscle adaptation","termid":"GO:0014745"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle hypertrophy","termid":"GO:1904204"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle hypertrophy","termid":"GO:0014734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle hypertrophy","synonyms":[{"name":"down regulation of skeletal muscle hypertrophy","type":"exact"},{"name":"down-regulation of skeletal muscle hypertrophy","type":"exact"},{"name":"downregulation of skeletal muscle hypertrophy","type":"exact"},{"name":"inhibition of skeletal muscle hypertrophy","type":"narrow"}],"termid":"GO:1904205"}


id: PBO:0058237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4525","termid":"PBO:0058237"}


id: PR:O94656
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.05","synonyms":[{"name":"Spom972h-atg16","type":"exact"}],"termid":"PR:O94656"}


id: PBO:0027798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tetraplatin","termid":"PBO:0027798"}


