# terms

id: PBO:0081552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 471","termid":"PBO:0081552"}


id: PBO:0026690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_tamoxifen","termid":"PBO:0026690"}


id: PBO:0038476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 15, pseudogene","termid":"PBO:0038476"}


id: PBO:0079880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 1B","termid":"PBO:0079880"}


id: GO:0170016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together an endosome and an ER membrane either via membrane lipid binding or by interacting with an endosome protein, to establish and facilitate organelle exchange.","definition_xrefs":["PMID:33124732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum-organelle membrane tether activity","termid":"GO:0170009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"endoplasmic reticulum-endosome tether activity","termid":"GO:0170016"}


id: GO:0097362
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hexameric protein complex composed of MCM8 and MCM9 and involved in homologous recombination repair following DNA interstrand cross-links.","definition_xrefs":["GOC:sp","PMID:22771115","PMID:22771120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MCM complex","termid":"GO:0042555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MCM8-MCM9 complex","termid":"GO:0097362"}


id: PBO:0058366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4738","termid":"PBO:0058366"}


id: GO:0009291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of unidirectional (polarized) transfer of genetic information involving direct cellular contact between a donor and recipient cell; the contact is followed by the formation of a cellular bridge that physically connects the cells. Some or all of the chromosome(s) of the donor cell is transferred into the recipient cell.","definition_xrefs":["Wikipedia:Bacterial_conjugation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horizontal gene transfer","termid":"GO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"unidirectional conjugation","synonyms":[{"name":"bacterial conjugation","type":"related"}],"termid":"GO:0009291"}


id: PBO:0075561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPG21 abhydrolase domain containing, maspardin","termid":"PBO:0075561"}


id: PBO:0088574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Spb4","termid":"PBO:0088574"}


id: GO:0170040
data:
  {"annotated_genes":["SJAG_00714","SJAG_01903","SJAG_03434","SJAG_03398","SJAG_02235","SJAG_02450","SJAG_03861","SJAG_04145","SJAG_00937","SJAG_00495","SJAG_03641","SJAG_02901","SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[70838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[78648,113511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[71275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[80015,92047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[78318,96739,74548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[68907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[114241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"},{"annotations":[78374,70616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[72343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any amino acid that is incorporated into protein naturally by ribosomal translation of mRNA, and that has a specific codon for translation from mRNA to protein.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00714":null,"SJAG_00937":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02450":null,"SJAG_02901":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"proteinogenic amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"proteinogenic amino acid breakdown","type":"exact"},{"name":"proteinogenic amino acid catabolism","type":"exact"},{"name":"proteinogenic amino acid degradation","type":"exact"}],"termid":"GO:0170040","terms_by_termid":{"GO:0006533":null,"GO:0006538":null,"GO:0006567":null,"GO:0010121":null,"GO:0010133":null,"GO:0019450":null,"GO:0019464":null,"GO:0019544":null,"GO:0019547":null,"GO:0042853":null}}


id: GO:1990051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of the inactive enzyme protein kinase C.","definition_xrefs":["PMID:3156004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of protein kinase activity","termid":"GO:0032147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of protein kinase C activity","synonyms":[{"name":"PKC activation","type":"exact"},{"name":"protein kinase C activation","type":"exact"}],"termid":"GO:1990051"}


id: PBO:0076219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite oxidase","termid":"PBO:0076219"}


id: FYPO:0006207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament depolymerization, i.e. the removal of actin monomers from a filament, is decreased.","definition_xrefs":["PMID:16866873","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament organization during vegetative growth","termid":"FYPO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0004803","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of actin filament depolymerization","synonyms":[{"name":"decreased rate of actin filament depolymerisation","type":"exact"},{"name":"decreased rate of actin filament depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin filament depolymerization during vegetative growth","type":"exact"},{"name":"reduced rate of actin filament depolymerization","type":"exact"}],"termid":"FYPO:0006207"}


id: MONDO:0013333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An often asymptomatic developmental abnormality of the cervical spine. It is characterized by the hypoplasia of the odontoid which appears as a stubby peg of an odontoid process. Symptoms may develop after minor trauma and include localized neck pain, atlantoaxial instability, and transient or permanent neurologic manifestations.","definition_xrefs":["NCIT:C86969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"odontoid hypoplasia","secondary_identifiers":["UMLS:C1846439","MEDGEN:339524","OMIM:613628"],"synonyms":[{"name":"odontoid hypoplasia","type":"exact"}],"termid":"MONDO:0013333","xrefs":{"Monarch":{"xref_id":"0013333"}}}


id: PATO:0000825
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000825 visual ability value (obsolete PATO:0000825)","termid":"PATO:0000825"}


id: GO:0036261
data:
  {"annotated_genes":["SJAG_03901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75330],"is_not":false,"summary":null,"term":"GO:0036261"}]},"cv_name":"biological_process","definition":"Hypermethylation of the 7-(mono)methylguanosine (m(7)G) cap structure at the 2' position of the guanosine residue to convert a mono-methylated cap to a 2,2,7-trimethylguanosine cap structure. This type of cap modification occurs on small nuclear RNAs (snRNAs) and small nucleolar RNAs (snoRNAs) and is dependent on prior guanine-N7 methylation.","definition_xrefs":["GOC:krc","GOC:rl","PMID:18775984","GOC:bf","GOC:BHF","GOC:mah","PMID:11983179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methylation","termid":"GO:0001510"},{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"7-methylguanosine cap hypermethylation","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"2,2,7-trimethylguanosine cap formation","type":"exact"},{"name":"TMG cap formation","type":"exact"},{"name":"conversion of m(7)G to m(3)G","type":"exact"},{"name":"hypermethylation of snRNA cap","type":"narrow"},{"name":"hypermethylation of snoRNA cap","type":"narrow"},{"name":"m(7)G cap hypermethylation","type":"exact"},{"name":"snRNA capping","type":"narrow"},{"name":"snoRNA capping","type":"narrow"}],"termid":"GO:0036261","terms_by_termid":{"GO:0036261":null}}


id: PBO:0048427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine amidotransferase class 1 domain containing 3","termid":"PBO:0048427"}


id: MOD:02015
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a linoloyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"linoloylated residue","termid":"MOD:02015"}


id: PBO:0085474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable DNA helicase; involved in sister-chromatid cohesion and genome integrity and interstrand cross-link repair; interacts with ECO1 and CTF18; mutants are defective in silencing, rDNA recombination, aging and the heat shock response; FANCJ-like helicase family member; mutations in the human homolog, DDX11/ChLR1, cause Warsaw breakage syndrome","termid":"PBO:0085474"}


id: GO:1905525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter in response to iron that results in regulation of ferrichrome biosynthetic process.","definition_xrefs":["GO_REF:0000063","GOC:TermGenie","PMID:20435771"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ferrichrome biosynthetic process by negative regulation of transcription from RNA polymerase II promoter in response to iron (obsolete GO:1905525)","synonyms":[{"name":"regulation of ferrichrome anabolism by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome anabolism by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome anabolism by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome anabolism by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome anabolism by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome anabolism by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthesis by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by negative regulation of transcription from Pol II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by negative regulation of transcription from Pol II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome formation by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome formation by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome formation by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome formation by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome formation by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome formation by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome synthesis by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"}],"termid":"GO:1905525"}


id: PBO:0053951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1256","termid":"PBO:0053951"}


id: GO:0102598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-sandaracopimaradien-3-beta-ol + NADPH + H+ + O2 = oryzalexin D + NADP + H2O.","definition_xrefs":["EC:1.14.14.123","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3alpha-hydroxy-ent-sandaracopimardiene 7-beta-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-15382","RHEA:41472"],"termid":"GO:0102598"}


id: PBO:0051654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 9","termid":"PBO:0051654"}


id: GO:0016080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which synaptic vesicles are directed to specific destination membranes, mediated by molecules at the vesicle membrane and target membrane surfaces.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting","termid":"GO:0006903"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"synaptic vesicle targeting","termid":"GO:0016080"}


id: GO:0004007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: heavy metal ion(in) + ATP + H2O = heavy metal ion(out) + ADP + phosphate.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal-exporting ATPase activity (obsolete GO:0004007)","synonyms":[{"name":"heavy metal-exporting ATPase activity","type":"exact"}],"termid":"GO:0004007"}


id: PBO:0080049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP21 pseudogene 1","termid":"PBO:0080049"}


id: PBO:0051594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 21 receptor","termid":"PBO:0051594"}


id: MONDO:0015239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"conotruncal heart malformations","termid":"MONDO:0016581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abnormal origin of the pulmonary artery","secondary_identifiers":["MEDGEN:539573","Orphanet:1138","GARD:18717","UMLS:C0265912","SCTID:68092007","icd11.foundation:953235173"],"termid":"MONDO:0015239","xrefs":{"Monarch":{"xref_id":"0015239"}}}


id: GO:0052361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of macromolecules within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of macromolecule in other organism involved in symbiotic interaction (obsolete GO:0052361)","synonyms":[{"name":"catabolism by organism of macromolecule in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052361"}


id: PBO:0058891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 11181","termid":"PBO:0058891"}


id: MONDO:0002107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unilateral hyperactive labyrinth","secondary_identifiers":["ICD9:386.51","UMLS:C0155515","MEDGEN:510001","DOID:1777"],"synonyms":[{"name":"hyperactive labyrinth, unilateral","type":"exact"},{"name":"hyperactive unilateral labyrinthine dysfunction","type":"exact"}],"termid":"MONDO:0002107","xrefs":{"Monarch":{"xref_id":"0002107"}}}


id: PBO:0042271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 7","termid":"PBO:0042271"}


id: PBO:0038651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 1","termid":"PBO:0038651"}


id: GO:1902126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-pinoresinol.","definition_xrefs":["PMID:9872995","PMID:8910615","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan biosynthetic process","termid":"GO:0009807"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"(+)-pinoresinol metabolic process","termid":"GO:1902124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"(+)-pinoresinol biosynthetic process","synonyms":[{"name":"(+)-pinoresinol anabolism","type":"exact"},{"name":"(+)-pinoresinol biosynthesis","type":"exact"},{"name":"(+)-pinoresinol formation","type":"exact"},{"name":"(+)-pinoresinol synthesis","type":"exact"}],"termid":"GO:1902126"}


id: PBO:0071538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 3","termid":"PBO:0071538"}


id: PBO:0076526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 39","termid":"PBO:0076526"}


id: FYPO:0007460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the portion of the nuclear envelope enclosing the midzone of the mitotic nuclear bridge is abnormal. The nuclear bridge is a narrow constricted region of the nucleus that forms around the mitotic spindle during anaphase.","definition_xrefs":["GO:0140510","PMID:32848252","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology at mitotic nuclear bridge","termid":"FYPO:0007459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002403","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge midzone","synonyms":[{"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge midzone during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge midzone during vegetative growth","type":"exact"}],"termid":"FYPO:0007460"}


id: GO:1990838
data:
  {"annotated_genes":["SJAG_01798"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68756],"is_not":false,"summary":null,"term":"GO:1990838"}]},"cv_name":"molecular_function","definition":"Catalysis of 3' exonucleolytic cleavage of poly(U), to form poly(U)-N containing a 3' uridine cyclic phosphate (U>P).","definition_xrefs":["PMID:23022480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-RNA exonuclease activity","termid":"GO:0000175"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01798":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0140098","GO:0004527","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends","references_by_uniquename":{"GO_REF:0000104":null},"termid":"GO:1990838","terms_by_termid":{"GO:1990838":null}}


id: PBO:0039867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene","termid":"PBO:0039867"}


id: PR:P33277
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gap1 gene.","definition_xrefs":["UniProtKB:P33277","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.12c","synonyms":[{"name":"Spom972h-gap1","type":"exact"},{"name":"ras GTPase-activating protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P33277"}


id: SO:0002063
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion of sequence from the Alu family of mobile elements.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobile_element_insertion","termid":"SO:0001837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alu_insertion","synonyms":[{"name":"Alu insertion","type":"exact"}],"termid":"SO:0002063"}


id: PBO:0082687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the GARP (Golgi-associated retrograde protein) complex; GARP is required for the recycling of proteins from endosomes to the late Golgi, and for mitosis after DNA damage induced checkpoint arrest; potentially phosphorylated by Cdc28p; members of the GARP complex are Vps51p-Vps52p-Vps53p-Vps54p","termid":"PBO:0082687"}


id: GO:0014897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of an organ due to an increase in size of muscle cells without cell division. In the case of striated muscle, this happens due to the additional synthesis of sarcomeric proteins and assembly of myofibrils.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle hypertrophy","termid":"GO:0014897"}


id: PBO:0054629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2034","termid":"PBO:0054629"}


id: GO:0046713
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"}]},"cv_name":"biological_process","definition":"The directed movement of borate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Borate is the anion (BO3)3-; boron is a group 13 element, with properties which are borderline between metals and non-metals.","definition_xrefs":["PMID:21710975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"borate transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"boron transport","type":"related"}],"termid":"GO:0046713","terms_by_termid":{"GO:0140159":null}}


id: PBO:0001430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain","termid":"PBO:0001430"}


id: PBO:0026889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-translation_regulation_phenotype_during_vegetative_growth","termid":"PBO:0026889"}


id: PBO:0072209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 8","termid":"PBO:0072209"}


id: PBO:0003540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I transcription factor subunit Rrn11 (predicted)","termid":"PBO:0003540"}


id: FYPO:0000106
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119719],"is_not":false,"summary":null,"term":"FYPO:0000106"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hygromycin B. Cells stop growing (and may die) at a concentration of hygromycin B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to hygromycin B","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"hypersensitive to hygromycin B","type":"exact"},{"name":"sensitive to hygromycin B during mitotic cell cycle","type":"related"},{"name":"sensitive to hygromycin B during vegetative growth","type":"exact"}],"termid":"FYPO:0000106","terms_by_termid":{"FYECO:0000126":null,"FYECO:0000137":null,"FYPO:0000106":null,"FYPO_EXT:0000002":null}}


id: MONDO:0043135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blindness (disorder)","termid":"MONDO:0001941"},{"relation_name":"is_a","term_name":"microphthalmia","termid":"MONDO:0021129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microcephaly microphthalmos blindness","secondary_identifiers":["MESH:C537541","UMLS:C2931526","MEDGEN:419434"],"termid":"MONDO:0043135","xrefs":{"Monarch":{"xref_id":"0043135"}}}


id: PBO:0081969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZRANB2 antisense RNA 1","termid":"PBO:0081969"}


id: PBO:0090993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HbrB family protein involved in TOR signaling Bit2","termid":"PBO:0090993"}


id: PBO:0072104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 2","termid":"PBO:0072104"}


id: MONDO:0022776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lip and/or palate with mucous cysts of lower","termid":"MONDO:0022776","xrefs":{"Monarch":{"xref_id":"0022776"}}}


id: PBO:0069499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 766, pseudogene","termid":"PBO:0069499"}


id: GO:0031167
data:
  {"annotated_genes":["SJAG_03289","SJAG_03332","SJAG_03877","SJAG_00744","SJAG_03773","SJAG_02377","SJAG_02821","SJAG_00943","SJAG_03410","SJAG_02281","SJAG_02024","SJAG_02417","SJAG_01958","SJAG_03008","SJAG_03016","SJAG_00722","SJAG_02350","SJAG_03713"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59644,64078,64498,66067,75442,79111,79616],"is_not":false,"summary":null,"term":"GO:0031167"},{"annotations":[80501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"},{"annotations":[76004,79314,78501,79010,80052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070475"},{"annotations":[108401,94466,110508,99118,111655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000452"}]},"cv_name":"biological_process","definition":"The posttranscriptional addition of methyl groups to specific residues in an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA modification","termid":"GO:0000154"},{"relation_name":"is_a","term_name":"RNA methylation","termid":"GO:0001510"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_00744":null,"SJAG_00943":null,"SJAG_01958":null,"SJAG_02024":null,"SJAG_02281":null,"SJAG_02350":null,"SJAG_02377":null,"SJAG_02417":null,"SJAG_02821":null,"SJAG_03008":null,"SJAG_03016":null,"SJAG_03289":null,"SJAG_03332":null,"SJAG_03410":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"rRNA methylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0031167","terms_by_termid":{"GO:0000452":null,"GO:0031167":null,"GO:0070475":null,"GO:0070476":null}}


id: PBO:0088804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall and ascospore endo-1,3-beta-glucanase Eng2","termid":"PBO:0088804"}


id: PR:Q9P7A1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PITH domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02656","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITH domain-containing protein P35G2.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.02","secondary_identifiers":["UniProtKB:Q9P7A1"],"synonyms":[{"name":"Spom972h-PITHD1","type":"exact"}],"termid":"PR:Q9P7A1"}


id: FYPO:0005927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the monoubiquitination of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein ubiquitination during vegetative growth","termid":"FYPO:0002635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein monoubiquitination during vegetative growth","synonyms":[{"name":"normal protein monoubiquitination during mitotic cell cycle","type":"related"},{"name":"normal protein monoubiquitinylation during vegetative growth","type":"exact"},{"name":"normal protein monoubiquitylation during vegetative growth","type":"exact"},{"name":"normal protein/peptide monoubiquitination during vegetative growth","type":"exact"}],"termid":"FYPO:0005927"}


id: GO:0050072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 7-methylguanosine 5'-triphospho-5'-polynucleotide + H2O = 7-methylguanosine 5'-phosphate + polynucleotide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete m7G(5')pppN diphosphatase activity (obsolete GO:0050072)","synonyms":[{"name":"M(7)G(5')pppN pyrophosphatase activity","type":"exact"}],"termid":"GO:0050072"}


id: MONDO:0007649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastric juice peptides (obsolete MONDO:0007649)","secondary_identifiers":["OMIM:137220"],"synonyms":[{"name":"gastric juice peptides","type":"exact"}],"termid":"MONDO:0007649","xrefs":{"Monarch":{"xref_id":"0007649"}}}


id: PBO:0072709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 3","termid":"PBO:0072709"}


id: GO:0016894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks to yield 3'-phosphomonoesters.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease activity","termid":"GO:0004519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters","secondary_identifiers":["EC:3.1.31.1"],"synonyms":[{"name":"3'-endonuclease activity","type":"exact"},{"name":"endoribonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters","type":"related"}],"termid":"GO:0016894"}


id: PBO:0116273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pseudopeptidase; conserved fungal protein and member of the M14 family of metallocarboxypeptidases but contains substitutions in active site residues important for catalysis and lacks activity with standard substrates; contains a cleavable pro domain; required for normal cell wall assembly in some strains","termid":"PBO:0116273"}


id: FYPO:0001245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cobalt ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to cobalt","synonyms":[{"name":"hypersensitive to cobalt","type":"exact"},{"name":"sensitive to cobalt during mitotic cell cycle","type":"related"},{"name":"sensitive to cobalt during vegetative growth","type":"exact"},{"name":"sensitive to cobalt ions","type":"exact"}],"termid":"FYPO:0001245"}


id: PBO:0081635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 563","termid":"PBO:0081635"}


id: PR:O60109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pho8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.13c","synonyms":[{"name":"Spom972h-pho8","type":"exact"}],"termid":"PR:O60109"}


id: GO:0046693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The retention of sperm by a female following mating.","definition_xrefs":["PMID:10885514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm competition","termid":"GO:0046692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm storage","synonyms":[{"name":"retention of sperm","type":"exact"},{"name":"sequestering of sperm","type":"exact"},{"name":"sequestration of sperm","type":"exact"},{"name":"sperm retention","type":"exact"},{"name":"sperm sequestering","type":"exact"},{"name":"sperm sequestration","type":"exact"},{"name":"storage of sperm","type":"exact"}],"termid":"GO:0046693"}


id: PBO:0113542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar SNX-BAR protein, regulates TORC1 signaling during autophagy induction; binds phosphatidylinositol-3-phosphate; vacuolar localization of Vps501p is dependent upon direct interaction with Iml1p and a unique lipid binding specificity that is also required for its function; VPS501 has paralog VPS5 that arose from the whole genome duplication","termid":"PBO:0113542"}


id: MONDO:0005550
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"}]},"cv_name":"mondo","definition":"A disorder directly resulting from the presence and activity of a microbial, viral, or parasitic agent in humans. It can be transmitted by direct or indirect contact.","definition_xrefs":["NCIT:C26726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"infectious disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1057","EFO:0005741","UMLS:C0009450","DOID:0050117","ICD10CM:A00-B99","ICD9:136.9","ICD9:136.8","MESH:D003141","SCTID:40733004","IDO:0000436","ICD9:079.0"],"synonyms":[{"name":"clinical infection","type":"narrow"},{"name":"communicable disease","type":"exact"},{"name":"disease by infectious agent","type":"related"},{"name":"infection","type":"exact"},{"name":"infectious","type":"exact"},{"name":"infectious disease","type":"exact"},{"name":"infectious diseases and manifestations","type":"exact"},{"name":"infectious disorder","type":"exact"},{"name":"transmissible disease","type":"exact"}],"termid":"MONDO:0005550","terms_by_termid":{"MONDO:0800029":null},"xrefs":{"Monarch":{"xref_id":"0005550"}}}


id: MONDO:0021829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agnathia-microstomia-synotia","secondary_identifiers":["MEDGEN:419145","UMLS:C2931718","MESH:C538059"],"synonyms":[{"name":"Plurimalformative syndrome","type":"related"},{"name":"agnathia, microstomia, synotia and cardiac and pulmonary maldevelopment","type":"related"}],"termid":"MONDO:0021829","xrefs":{"Monarch":{"xref_id":"0021829"}}}


id: GO:0030902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium).","definition_xrefs":["PMID:4975589","PMID:4992177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain development","synonyms":[{"name":"rhombencephalon development","type":"exact"}],"termid":"GO:0030902"}


id: MONDO:0018566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-advanced bone age-early-onset osteoarthritis syndrome","secondary_identifiers":["UMLS:C5681177","Orphanet:435804","GARD:17717","MEDGEN:1811782"],"termid":"MONDO:0018566","xrefs":{"Monarch":{"xref_id":"0018566"}}}


id: PBO:0039627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A9","termid":"PBO:0039627"}


id: GO:0071378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth hormone stimulus. Growth hormone is a peptide hormone that binds to the growth hormone receptor and stimulates growth.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth hormone","termid":"GO:0060416"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to growth hormone stimulus","termid":"GO:0071378"}


id: MONDO:0010596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary membranoproliferative glomerulonephritis","termid":"MONDO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"membranoproliferative glomerulonephritis, X-linked","secondary_identifiers":["UMLS:C1844501","MEDGEN:336706","OMIM:305800","MESH:C564423"],"synonyms":[{"name":"Mesangiocapillary glomerulonephritis, X-linked","type":"related"},{"name":"membranoproliferative glomerulonephritis, X-linked","type":"exact"}],"termid":"MONDO:0010596","xrefs":{"Monarch":{"xref_id":"0010596"}}}


id: GO:0019060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a viral protein within the host cell.","definition_xrefs":["PMID:11581394","ISBN:0781718325","PMID:9188566","GOC:ai","ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont intracellular protein transport in host","termid":"GO:0030581"},{"relation_name":"part_of","term_name":"regulation by virus of viral protein levels in host cell","termid":"GO:0046719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"intracellular transport of viral protein in host cell","secondary_identifiers":["Reactome:R-HSA-168874","GO:0046742","GO:0046743","GO:0046801"],"synonyms":[{"name":"cytoplasmic viral capsid transport","type":"narrow"},{"name":"intracellular transport of viral capsid in host cell","type":"narrow"},{"name":"intracellular transport of viral capsid protein in host cell","type":"narrow"},{"name":"intracellular transport of viral proteins in host cell","type":"exact"},{"name":"intracellular viral capsid transport","type":"narrow"},{"name":"intracellular viral protein transport","type":"exact"},{"name":"nuclear viral capsid transport","type":"narrow"},{"name":"viral capsid transport in host cell cytoplasm","type":"narrow"},{"name":"viral capsid transport in host cell nucleus","type":"narrow"}],"termid":"GO:0019060"}


id: PBO:0030873
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_amino_acid_import_during_vegetative_growth","termid":"PBO:0030873"}


id: PBO:0075550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm flagellar 2","termid":"PBO:0075550"}


id: PR:O94273
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic peptidyl-prolyl cis-trans isomerase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03809","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.25","secondary_identifiers":["UniProtKB:O94273"],"synonyms":[{"name":"PPIase B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPIB","type":"exact"},{"name":"cyclophilin 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94273"}


id: PBO:0063390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6-AHRR readthrough (NMD candidate)","termid":"PBO:0063390"}


id: GO:0003305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell of the myocardium from one site to another that will contribute to heart jogging.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"heart jogging","termid":"GO:0003146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in heart jogging","termid":"GO:0003305"}


id: PBO:0041432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 89","termid":"PBO:0041432"}


id: MONDO:0011499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Okamoto syndrome (obsolete MONDO:0011499)","termid":"MONDO:0011499","xrefs":{"Monarch":{"xref_id":"0011499"}}}


id: PBO:0041669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyclin binding protein pseudogene 2","termid":"PBO:0041669"}


id: GO:0008061
data:
  {"annotated_genes":["SJAG_00620","SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67344,92111],"is_not":false,"summary":null,"term":"GO:0008061"}]},"cv_name":"molecular_function","definition":"Binding to chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00620":null,"SJAG_03013":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chitin binding","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null},"termid":"GO:0008061","terms_by_termid":{"GO:0008061":null}}


id: PBO:0040162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate lyase pseudogene 1","termid":"PBO:0040162"}


id: GO:0034936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,6-dichloro-3-methylcatechol + O2 = 3,5-dichloro-3-methyl-cis,cis-muconate + 2 H+.","definition_xrefs":["UM-BBD_reactionID:r0959"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,6-dichloro-3-methylcatechol 1,2-dioxygenase activity (obsolete GO:0034936)","termid":"GO:0034936"}


id: GO:0010539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the Hsp27 molecular chaperone.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsp27 protein inhibitor activity (obsolete GO:0010539)","synonyms":[{"name":"Hsp27 protein inhibitor activity","type":"exact"}],"termid":"GO:0010539"}


id: PBO:0111425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo4","termid":"PBO:0111425"}


id: PBO:0048395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 2 like 1 pseudogene 2","termid":"PBO:0048395"}


id: PBO:0030777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_sodium_dodecyl_sulfate","termid":"PBO:0030777"}


id: PBO:0074814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 15A","termid":"PBO:0074814"}


id: GO:0042320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of rapid eye movement (REM) sleep.","definition_xrefs":["PMID:11506998","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, sleep","termid":"GO:0045187"},{"relation_name":"regulates","term_name":"circadian sleep/wake cycle, REM sleep","termid":"GO:0042747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of circadian sleep/wake cycle, REM sleep","synonyms":[{"name":"regulation of REM sleep","type":"exact"}],"termid":"GO:0042320"}


id: GO:0034172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 11 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 11 signaling pathway","termid":"GO:0034171"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 11 signaling pathway","termid":"GO:0034170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 11 signaling pathway","synonyms":[{"name":"negative regulation of TLR11 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 11 signalling pathway","type":"exact"}],"termid":"GO:0034172"}


id: PBO:0082230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha catalytic subunit of casein kinase 2 (CK2); a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases; regulates Fkh1p-mediated donor preference during mating-type switching","termid":"PBO:0082230"}


id: GO:0042841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-glucuronate, the D-enantiomer of glucuronate.","definition_xrefs":["GOC:jl","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucuronate metabolic process","termid":"GO:0042839"},{"relation_name":"is_a","term_name":"glucuronate biosynthetic process","termid":"GO:0046399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-glucuronate biosynthetic process","synonyms":[{"name":"D-glucuronate anabolism","type":"exact"},{"name":"D-glucuronate biosynthesis","type":"exact"},{"name":"D-glucuronate formation","type":"exact"},{"name":"D-glucuronate synthesis","type":"exact"}],"termid":"GO:0042841"}


id: GO:0062000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac endothelial to mesenchymal trnasition.","definition_xrefs":["PMID:26857067","GOC:BHF","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of cardiac endothelial to mesenchymal transition","termid":"GO:0061999"},{"relation_name":"positively_regulates","term_name":"cardiac endothelial to mesenchymal transition","termid":"GO:0140074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac endothelial to mesenchymal transition","termid":"GO:0062000"}


id: MONDO:0003829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A controversial term, used for renal papillary lesions which measure 1cm or less in diameter and contain small, regular nuclei.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal adenoma","termid":"MONDO:0002395"},{"relation_name":"is_a","term_name":"papillary adenoma","termid":"MONDO:0002533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"chromophil adenoma of the kidney","secondary_identifiers":["DOID:6257","MEDGEN:309551","UMLS:C1518879","NCIT:C3687"],"synonyms":[{"name":"chromophil adenoma of the kidney","type":"exact"},{"name":"papillary adenoma of the kidney","type":"exact"},{"name":"renal papillary adenoma","type":"exact"}],"termid":"MONDO:0003829","xrefs":{"Monarch":{"xref_id":"0003829"}}}


id: FYPO:0004143
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of nitrite (NO2-) ions measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular nitrite level","synonyms":[{"name":"increased cellular nitrite accumulation","type":"related"},{"name":"increased cellular nitrite ion level","type":"exact"},{"name":"increased cellular nitrite level during mitotic cell cycle","type":"related"},{"name":"increased cellular nitrite level during vegetative growth","type":"exact"}],"termid":"FYPO:0004143"}


id: GO:0070964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed killing of a gram-positive bacterium by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of gram-positive bacterium","termid":"GO:0070952"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil mediated killing of bacterium","termid":"GO:0070962"},{"relation_name":"positively_regulates","term_name":"neutrophil-mediated killing of gram-positive bacterium","termid":"GO:0070946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil mediated killing of gram-positive bacterium","synonyms":[{"name":"activation of neutrophil mediated killing of gram-positive bacterium","type":"narrow"},{"name":"stimulation of neutrophil mediated killing of gram-positive bacterium","type":"narrow"},{"name":"up regulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"},{"name":"up-regulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"},{"name":"upregulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"}],"termid":"GO:0070964"}


id: PBO:0054979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2393","termid":"PBO:0054979"}


id: PBO:0087898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; involved in cell-type-specific transcription and pheromone response; plays a central role in the formation of both repressor and activator complexes; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087898"}


id: PBO:0076854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tet methylcytosine dioxygenase 1 pseudogene 1","termid":"PBO:0076854"}


id: PBO:0012291
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YOR341W","termid":"PBO:0012291"}


id: MONDO:0003497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the renal pelvis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"renal pelvis carcinoma","termid":"MONDO:0005519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"renal pelvis squamous cell carcinoma","secondary_identifiers":["UMLS:C0238409","DOID:5534","NCIT:C7732","MEDGEN:66769"],"synonyms":[{"name":"epidermoid carcinoma of kidney pelvis","type":"exact"},{"name":"epidermoid carcinoma of renal pelvis","type":"exact"},{"name":"epidermoid carcinoma of the kidney pelvis","type":"exact"},{"name":"epidermoid carcinoma of the renal pelvis","type":"exact"},{"name":"kidney pelvis epidermoid carcinoma","type":"exact"},{"name":"kidney pelvis squamous cell carcinoma","type":"exact"},{"name":"kidney renal pelvis squamous cell cancer","type":"exact"},{"name":"renal pelvis epidermoid carcinoma","type":"exact"},{"name":"renal pelvis squamous cell cancer","type":"exact"},{"name":"renal pelvis squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of kidney pelvis","type":"exact"},{"name":"squamous cell carcinoma of renal pelvis","type":"exact"},{"name":"squamous cell carcinoma of the kidney pelvis","type":"exact"},{"name":"squamous cell carcinoma of the renal pelvis","type":"exact"}],"termid":"MONDO:0003497","xrefs":{"Monarch":{"xref_id":"0003497"}}}


id: MONDO:0018968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Iniencephaly is a rare form of neural tube defect in which a malformation of the cervico-occipital junction is associated with a malformation of the central nervous system.","definition_xrefs":["Orphanet:63259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"iniencephaly","secondary_identifiers":["NCIT:C124549","SCTID:2438005","GARD:10506","icd11.foundation:1558931335","MEDGEN:57756","ICD10CM:Q00.2","ICD9:740.2","MedDRA:10022034","UMLS:C0152234"],"termid":"MONDO:0018968","xrefs":{"Monarch":{"xref_id":"0018968"}}}


id: GO:1990507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of inhibiting aggregation and assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that is dependent on interaction with a chaperone, and independent of ATP hydrolysis.","definition_xrefs":["GOC:rb","PMID:25242142"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP-independent chaperone mediated protein folding (obsolete GO:1990507)","termid":"GO:1990507"}


id: GO:0006090
data:
  {"annotated_genes":["SJAG_03660","SJAG_00027","SJAG_03671","SJAG_02158","SJAG_03064","SJAG_02006","SJAG_03903","SJAG_01310","SJAG_02107","SJAG_02009","SJAG_04334","SJAG_06622","SJAG_04192","SJAG_00464","SJAG_00605","SJAG_02945","SJAG_05314","SJAG_00839","SJAG_00866","SJAG_02135","SJAG_02785","SJAG_02176","SJAG_02796","SJAG_03290","SJAG_03373","SJAG_04048","SJAG_00685","SJAG_02369","SJAG_03828","SJAG_01402","SJAG_03310","SJAG_06621","SJAG_00461","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73381,73559],"is_not":false,"summary":null,"term":"GO:0006090"},{"annotations":[78210,105778,94863,95352,103698,109702,116652,106147,105776,109701,109703,109700,109699,103954,98590,105777,98318,109698,106146,109697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[114241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"},{"annotations":[73408,76377],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[73114,74982,87768,73746,88198,79415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[75466],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[70420],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyruvate, 2-oxopropanoate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00464":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_00866":null,"SJAG_01310":null,"SJAG_01402":null,"SJAG_02006":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02158":null,"SJAG_02176":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03310":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03671":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyruvate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:P41-PWY","Reactome:R-HSA-70268","GO:0006087","Wikipedia:Pyruvic_acid"],"synonyms":[{"name":"pyruvate dehydrogenase bypass","type":"related"},{"name":"pyruvate metabolism","type":"exact"}],"termid":"GO:0006090","terms_by_termid":{"GO:0006086":null,"GO:0006090":null,"GO:0006110":null,"GO:0010510":null,"GO:0019450":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: PBO:0005018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain protein Btb1","termid":"PBO:0005018"}


id: PBO:0029918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_lanosterol_level","termid":"PBO:0029918"}


id: GO:0000006
data:
  {"annotated_genes":["SJAG_04185"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104491],"is_not":false,"summary":null,"term":"GO:0000006"}]},"cv_name":"molecular_function","definition":"Enables the transfer of zinc ions (Zn2+) from one side of a membrane to the other, probably powered by proton motive force. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["TC:2.A.5.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"high-affinity zinc transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high affinity zinc uptake transmembrane transporter activity","type":"exact"},{"name":"high-affinity zinc uptake transmembrane transporter activity","type":"related"}],"termid":"GO:0000006","terms_by_termid":{"GO:0000006":null}}


id: PBO:0079732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 9 (pseudogene)","termid":"PBO:0079732"}


id: GO:1904984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of quinolinate biosynthetic process.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:12140278","PMID:19843166","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"quinolinate biosynthetic process","termid":"GO:0019805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of quinolinate biosynthetic process","synonyms":[{"name":"regulation of quinolinate anabolism","type":"exact"},{"name":"regulation of quinolinate biosynthesis","type":"exact"},{"name":"regulation of quinolinate formation","type":"exact"},{"name":"regulation of quinolinate synthesis","type":"exact"}],"termid":"GO:1904984"}


id: PBO:0109367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 4","termid":"PBO:0109367"}


id: MONDO:0859007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"mosaic Legius syndrome","secondary_identifiers":["MEDGEN:1843406","Orphanet:634511","UMLS:C5816780"],"termid":"MONDO:0859007","xrefs":{"Monarch":{"xref_id":"0859007"}}}


id: GO:0005311
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (dicarboxylate or tricarboxylate)(out) + Na+(out) = (dicarboxylate or tricarboxylate)(in) + Na+(in).","definition_xrefs":["TC:2.A.47.1.5"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium:dicarboxylate/tricarboxylate symporter activity (obsolete GO:0005311)","synonyms":[{"name":"sodium:dicarboxylate/tricarboxylate cotransporter activity","type":"broad"},{"name":"sodium:dicarboxylate/tricarboxylate symporter activity","type":"exact"}],"termid":"GO:0005311"}


id: PBO:0080548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 7","termid":"PBO:0080548"}


id: PBO:0028683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_establishment_of_mitotic_spindle_pole_body_localization_to_nuclear_envelope,_with_spindle_pole_body_in_nucleoplasm","termid":"PBO:0028683"}


id: MONDO:0010485
data:
  {"annotated_genes":["SJAG_03603"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85609],"is_not":false,"summary":null,"term":"MONDO:0010485"}]},"cv_name":"mondo","definition":"X-linked colobomatous microphthalmia-microcephaly-intellectual disability-short stature syndrome is a rare syndromic microphthalmia disorder characterized by microphthalmia with coloboma (which may involve the iris, cilary body, choroid, retina and/or optic nerve), microcephaly, short stature and intellectual disability. Other eye abnormalities such as pendular nystagmus, esotropia and ptosis may also be present. Additional associated abnormalities include kyphoscoliosis, anteverted pinnae with minimal convolutions, diastema of the incisors and congenital pes varus.","definition_xrefs":["Orphanet:431140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked colobomatous microphthalmia-microcephaly-intellectual disability-short stature syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:300915","UMLS:C3806742","GARD:17709","DOID:0111811","MEDGEN:813072"],"synonyms":[{"name":"MCOPS13","type":"related"},{"name":"Maine microphthalmos","type":"related"},{"name":"X-linked colobomatous microphthalmia-microcephaly-short stature-psychomotor retardation syndrome","type":"exact"},{"name":"colobomatous microphthalmia with microcephaly, short stature, and psychomotor retardation","type":"related"},{"name":"microphthalmia, syndromic 13","type":"related"},{"name":"microphthalmia, syndromic type 13","type":"exact"}],"termid":"MONDO:0010485","terms_by_termid":{"MONDO:0010485":null},"xrefs":{"Monarch":{"xref_id":"0010485"}}}


id: PBO:0051736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INTS6 antisense RNA 1","termid":"PBO:0051736"}


id: GO:0075263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the development of an oogonium, a female gametangium of Oomycetes, containing one or more gametes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oogonium development","termid":"GO:0075263"}


id: MONDO:0006057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thymic lymphoma (obsolete MONDO:0006057)","termid":"MONDO:0006057","xrefs":{"Monarch":{"xref_id":"0006057"}}}


id: PBO:0011494
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin b5-like gene","termid":"PBO:0011494"}


id: PBO:0054748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2157","termid":"PBO:0054748"}


id: GO:0033454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GCC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GCC codon-amino acid adaptor activity","synonyms":[{"name":"alanine tRNA","type":"related"}],"termid":"GO:0033454"}


id: MOD:01295
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to monosodium L-aspartate.","definition_xrefs":["PubMed:12216740","Unimod:30#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosodium salt","termid":"MOD:00423"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosodium L-aspartate","synonyms":[{"name":"Cation:Na","type":"related"},{"name":"Na1Asp","type":"exact"},{"name":"Sodium adduct","type":"related"}],"termid":"MOD:01295"}


id: PBO:0060659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural cytotoxicity triggering receptor 3","termid":"PBO:0060659"}


id: PBO:0078507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLR4 interactor with leucine rich repeats","termid":"PBO:0078507"}


id: PBO:0004605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA R47 (predicted)","termid":"PBO:0004605"}


id: GO:1903285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hydrogen peroxide catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:23507046","GOC:PARL","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of hydrogen peroxide metabolic process","termid":"GO:0010726"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide catabolic process","termid":"GO:2000295"},{"relation_name":"positively_regulates","term_name":"hydrogen peroxide catabolic process","termid":"GO:0042744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrogen peroxide catabolic process","synonyms":[{"name":"activation of H2O2 catabolic process","type":"narrow"},{"name":"activation of H2O2 scavenging","type":"related"},{"name":"activation of detoxification of H2O2","type":"related"},{"name":"activation of detoxification of hydrogen peroxide","type":"related"},{"name":"activation of hydrogen peroxide breakdown","type":"narrow"},{"name":"activation of hydrogen peroxide catabolic process","type":"narrow"},{"name":"activation of hydrogen peroxide catabolism","type":"narrow"},{"name":"activation of hydrogen peroxide degradation","type":"narrow"},{"name":"activation of hydrogen peroxide removal","type":"related"},{"name":"activation of hydrogen peroxide scavenging","type":"related"},{"name":"positive regulation of H2O2 catabolic process","type":"exact"},{"name":"positive regulation of H2O2 scavenging","type":"related"},{"name":"positive regulation of detoxification of H2O2","type":"related"},{"name":"positive regulation of detoxification of hydrogen peroxide","type":"related"},{"name":"positive regulation of hydrogen peroxide breakdown","type":"exact"},{"name":"positive regulation of hydrogen peroxide catabolism","type":"exact"},{"name":"positive regulation of hydrogen peroxide degradation","type":"exact"},{"name":"positive regulation of hydrogen peroxide removal","type":"related"},{"name":"positive regulation of hydrogen peroxide scavenging","type":"related"},{"name":"up regulation of H2O2 catabolic process","type":"exact"},{"name":"up regulation of H2O2 scavenging","type":"related"},{"name":"up regulation of detoxification of H2O2","type":"related"},{"name":"up regulation of detoxification of hydrogen peroxide","type":"related"},{"name":"up regulation of hydrogen peroxide breakdown","type":"exact"},{"name":"up regulation of hydrogen peroxide catabolic process","type":"exact"},{"name":"up regulation of hydrogen peroxide catabolism","type":"exact"},{"name":"up regulation of hydrogen peroxide degradation","type":"exact"},{"name":"up regulation of hydrogen peroxide removal","type":"related"},{"name":"up regulation of hydrogen peroxide scavenging","type":"related"},{"name":"up-regulation of H2O2 catabolic process","type":"exact"},{"name":"up-regulation of H2O2 scavenging","type":"related"},{"name":"up-regulation of detoxification of H2O2","type":"related"},{"name":"up-regulation of detoxification of hydrogen peroxide","type":"related"},{"name":"up-regulation of hydrogen peroxide breakdown","type":"exact"},{"name":"up-regulation of hydrogen peroxide catabolic process","type":"exact"},{"name":"up-regulation of hydrogen peroxide catabolism","type":"exact"},{"name":"up-regulation of hydrogen peroxide degradation","type":"exact"},{"name":"up-regulation of hydrogen peroxide removal","type":"related"},{"name":"up-regulation of hydrogen peroxide scavenging","type":"related"},{"name":"upregulation of H2O2 catabolic process","type":"exact"},{"name":"upregulation of H2O2 scavenging","type":"related"},{"name":"upregulation of detoxification of H2O2","type":"related"},{"name":"upregulation of detoxification of hydrogen peroxide","type":"related"},{"name":"upregulation of hydrogen peroxide breakdown","type":"exact"},{"name":"upregulation of hydrogen peroxide catabolic process","type":"exact"},{"name":"upregulation of hydrogen peroxide catabolism","type":"exact"},{"name":"upregulation of hydrogen peroxide degradation","type":"exact"},{"name":"upregulation of hydrogen peroxide removal","type":"related"},{"name":"upregulation of hydrogen peroxide scavenging","type":"related"}],"termid":"GO:1903285"}


id: PBO:0090653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor GTPase Guf1","termid":"PBO:0090653"}


id: FYPO:0007350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) at a cis-acting homologous chromosome pairing region on chromosome 2.","definition_xrefs":["PomBase:mah","PMID:31811152","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 2","synonyms":[{"name":"decreased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"},{"name":"decreased homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"decreased synapsis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"},{"name":"reduced homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"}],"termid":"FYPO:0007350"}


id: GO:1902460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal stem cell proliferation.","definition_xrefs":["GOC:pm","GOC:TermGenie","PMID:18672106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stem cell proliferation","termid":"GO:0072091"},{"relation_name":"regulates","term_name":"mesenchymal stem cell proliferation","termid":"GO:0097168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal stem cell proliferation","synonyms":[{"name":"regulation of MSC proliferation","type":"exact"}],"termid":"GO:1902460"}


id: PBO:0087739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Snt2C complex; physically associates with Snt2p and Rpd3p; along with Snt2p, recruits Rpd3p to a small number of promoters; also colocalizes with Snt2p, independently of Rpd3p, to promoters of stress response genes in response to oxidative stress; contains ATP/GTP-binding site motif A; null mutant exhibits increased cellular volume, large drooping buds with elongated necks; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087739"}


id: GO:0061068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the urethra over time from its initial formation to the mature structure. The urethra is a renal system organ that carries urine from the bladder to outside the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urethra development","termid":"GO:0061068"}


id: GO:1903977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glial cell migration.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:nc","PMID:19100238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"positively_regulates","term_name":"glial cell migration","termid":"GO:0008347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell migration","synonyms":[{"name":"activation of glia cell migration","type":"narrow"},{"name":"activation of glial cell migration","type":"narrow"},{"name":"positive regulation of glia cell migration","type":"exact"},{"name":"up regulation of glia cell migration","type":"exact"},{"name":"up regulation of glial cell migration","type":"exact"},{"name":"up-regulation of glia cell migration","type":"exact"},{"name":"up-regulation of glial cell migration","type":"exact"},{"name":"upregulation of glia cell migration","type":"exact"},{"name":"upregulation of glial cell migration","type":"exact"}],"termid":"GO:1903977"}


id: PBO:0074155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E3","termid":"PBO:0074155"}


id: PBO:0059657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 23","termid":"PBO:0059657"}


id: GO:0016985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans, galactomannans, glucomannans, and galactoglucomannans.","definition_xrefs":["EC:3.2.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-mannosidase activity","termid":"GO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"mannan endo-1,4-beta-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.78-RXN"],"synonyms":[{"name":"1,4-beta-D-mannan mannanohydrolase activity","type":"related"},{"name":"beta-1,4-mannan 4-mannanohydrolase activity","type":"related"},{"name":"beta-D-mannanase activity","type":"related"},{"name":"beta-mannanase B","type":"related"},{"name":"beta-mannanase activity","type":"broad"},{"name":"endo-1,4-beta-mannanase activity","type":"related"},{"name":"endo-1,4-mannanase activity","type":"broad"},{"name":"endo-beta-1,4-mannase activity","type":"related"},{"name":"endo-beta-mannanase activity","type":"broad"}],"termid":"GO:0016985"}


id: PBO:0053686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 879","termid":"PBO:0053686"}


id: GO:0046827
data:
  {"annotated_genes":["SJAG_04312","SJAG_04464","SJAG_01805","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94148,100761,102167,111322],"is_not":false,"summary":null,"term":"GO:0046827"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleocytoplasmic transport","termid":"GO:0046824"},{"relation_name":"is_a","term_name":"regulation of protein export from nucleus","termid":"GO:0046825"},{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"positively_regulates","term_name":"protein export from nucleus","termid":"GO:0006611"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01805":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006913","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of protein export from nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein export from nucleus","type":"narrow"},{"name":"positive regulation of protein export from cell nucleus","type":"exact"},{"name":"positive regulation of protein export out of nucleus","type":"exact"},{"name":"positive regulation of protein transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of protein-nucleus export","type":"exact"},{"name":"stimulation of protein export from nucleus","type":"narrow"},{"name":"up regulation of protein export from nucleus","type":"exact"},{"name":"up-regulation of protein export from nucleus","type":"exact"},{"name":"upregulation of protein export from nucleus","type":"exact"}],"termid":"GO:0046827","terms_by_termid":{"GO:0046827":null}}


id: RO:0002112
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a muscle and a motor neuron that synapses to it via a type Is bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_by","termid":"RO:0002103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_by_via_type_Is_bouton","termid":"RO:0002112"}


id: GO:0086056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of an AV node cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in AV node cell action potential","synonyms":[{"name":"voltage-gated calcium channel activity involved in AV node cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated calcium channel activity involved in atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086056"}


id: MONDO:0957542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 22, adult-onset","secondary_identifiers":["OMIM:620456","UMLS:C5830658","DOID:0060967","MEDGEN:1841294"],"termid":"MONDO:0957542","xrefs":{"Monarch":{"xref_id":"0957542"}}}


id: MONDO:0009569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hennekam-Beemer syndrome is characterized by the association of skin mastocytosis (appearing as diffuse pigmentation), short stature, microcephaly, conductive hearing loss, and dysmorphic features. It has been described in only two (female) cases: one with normal mental development born to consanguineous parents and the other with severe psychomotor retardation born to unrelated parents. The mode of inheritance is most likely autosomal recessive.","definition_xrefs":["Orphanet:2135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hennekam-Beemer syndrome","secondary_identifiers":["MESH:C536033","GARD:3409","MEDGEN:462843","OMIM:248910","UMLS:C3151493","ICD10CM:Q82.2","SCTID:722453009"],"synonyms":[{"name":"Hennekam Beemer syndrome","type":"related"},{"name":"cutaneous mastocytosis, conductive hearing loss and microtia","type":"related"},{"name":"mastocytosis cutaneous with short stature conductive hearing loss and microtia","type":"related"},{"name":"mastocytosis-short stature-hearing loss syndrome","type":"exact"},{"name":"skin mastocytosis hearing loss microcephaly mild dysmorphic features and severe intellectual disability","type":"related"},{"name":"skin mastocytosis hearing loss microcephaly mild dysmorphic features and severe mental retardation","type":"related"}],"termid":"MONDO:0009569","xrefs":{"Monarch":{"xref_id":"0009569"}}}


id: PR:O14258
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ace2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein expression activator (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.12c","synonyms":[{"name":"Spom972h-ace2","type":"exact"}],"termid":"PR:O14258"}


id: GO:0062043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts or increases the rate, frequency or extent of cardiac epithelial to mesenchymal transition, a transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:rph","GOC:BHF","PMID:20951801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial to mesenchymal transition","termid":"GO:0010718"},{"relation_name":"is_a","term_name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"},{"relation_name":"positively_regulates","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062043"}


id: PBO:0056636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 13 pseudogene 1","termid":"PBO:0056636"}


id: GO:0019671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The anaerobic chemical reactions and pathways resulting in the breakdown of glutamate via the intermediates mesaconate and S-citramalate, yielding energy in the form of ATP.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate catabolic process via mesaconate and citramalate (obsolete GO:0019671)","synonyms":[{"name":"glutamate fermentation via mesaconate and citramalate","type":"exact"}],"termid":"GO:0019671"}


id: PBO:0082449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-22 sterol desaturase; a cytochrome P450 enzyme that catalyzes the formation of the C-22(23) double bond in the sterol side chain in ergosterol biosynthesis; may be a target of azole antifungal drugs","termid":"PBO:0082449"}


id: GO:0019036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specific locations and structures in the virus infected cell involved in transcribing the viral genome.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"viral transcriptional complex","termid":"GO:0019036"}


id: PBO:0090066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNP binding protein Sgt1","termid":"PBO:0090066"}


id: MONDO:0015645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare reflex epilepsy characterized by in most cases complex partial seizures triggered by different components of eating, such as the sight of food, proprioceptive, olfactory or gustatory sensations, chewing, salivation, and gastric distension after food intake. The seizures may be idiopathic or associated with symptomatic localization-related epilepsies.","definition_xrefs":["Orphanet:166418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflex epilepsy","termid":"MONDO:0017768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"eating seizures","secondary_identifiers":["MEDGEN:581543","UMLS:C0393725","GARD:20078","SCTID:230450001"],"synonyms":[{"name":"eating epilepsy","type":"exact"},{"name":"eating reflex epilepsy","type":"related"}],"termid":"MONDO:0015645","xrefs":{"Monarch":{"xref_id":"0015645"}}}


id: PBO:0073278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 12","termid":"PBO:0073278"}


id: PBO:0074812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 14D","termid":"PBO:0074812"}


id: GO:0070780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrosphingosine 1-phosphate + H2O = dihydrosphingosine + phosphate.","definition_xrefs":["PMID:12815058","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dihydrosphingosine-1-phosphate phosphatase activity","secondary_identifiers":["MetaCyc:DHS-PHOSPHATASE-RXN","RHEA:27514"],"synonyms":[{"name":"dihydrosphingosine-1-phosphate phosphohydrolase activity","type":"exact"},{"name":"sphinganine-1-phosphate phosphatase activity","type":"exact"}],"termid":"GO:0070780"}


id: PR:O74452
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scw1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall integrity protein scw1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.07","synonyms":[{"name":"Spom972h-scw1","type":"exact"},{"name":"strong cell wall protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74452"}


id: PBO:0091322
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate KM, thiamine KM 6 uM","termid":"PBO:0091322"}


id: PBO:0061119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 9","termid":"PBO:0061119"}


id: PBO:0051818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 3","termid":"PBO:0051818"}


id: PBO:0086813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YLR012C is not an essential gene","termid":"PBO:0086813"}


id: PR:Q9UUG5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin regulatory light chain MRLC3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin regulatory light chain 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.03","secondary_identifiers":["UniProtKB:Q9UUG5"],"synonyms":[{"name":"Spom972h-MYL12A","type":"exact"}],"termid":"PR:Q9UUG5"}


id: GO:1905050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metallopeptidase activity.","definition_xrefs":["PMID:26473732","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of metallopeptidase activity","termid":"GO:1905048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metallopeptidase activity","synonyms":[{"name":"activation of metallopeptidase activity","type":"narrow"},{"name":"activation of metalloprotease activity","type":"narrow"},{"name":"activation of metalloproteinase activity","type":"narrow"},{"name":"positive regulation of metalloprotease activity","type":"narrow"},{"name":"positive regulation of metalloproteinase activity","type":"narrow"},{"name":"up regulation of metallopeptidase activity","type":"exact"},{"name":"up regulation of metalloprotease activity","type":"narrow"},{"name":"up regulation of metalloproteinase activity","type":"narrow"},{"name":"up-regulation of metallopeptidase activity","type":"exact"},{"name":"up-regulation of metalloprotease activity","type":"narrow"},{"name":"up-regulation of metalloproteinase activity","type":"narrow"},{"name":"upregulation of metallopeptidase activity","type":"exact"},{"name":"upregulation of metalloprotease activity","type":"narrow"},{"name":"upregulation of metalloproteinase activity","type":"narrow"}],"termid":"GO:1905050"}


id: GO:0035025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Rho protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rho protein signal transduction","termid":"GO:0035023"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"Rho protein signal transduction","termid":"GO:0007266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Rho protein signal transduction","synonyms":[{"name":"activation of Rho protein signal transduction","type":"narrow"},{"name":"stimulation of Rho protein signal transduction","type":"narrow"},{"name":"up regulation of Rho protein signal transduction","type":"exact"},{"name":"up-regulation of Rho protein signal transduction","type":"exact"},{"name":"upregulation of Rho protein signal transduction","type":"exact"}],"termid":"GO:0035025"}


id: PBO:0052498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 10","termid":"PBO:0052498"}


id: MONDO:0013987
data:
  {"annotated_genes":["SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87384],"is_not":false,"summary":null,"term":"MONDO:0013987"}]},"cv_name":"mondo","definition":"Combined oxidative phosphorylation defect type 15 is a rare mitochondrial disease due to a defect in mitochondrial protein synthesis characterized by onset in infancy or early childhood of muscular hypotonia, gait ataxia, mild bilateral pyramidal tract signs, developmental delay (affecting mostly speech and coordination) and subsequent intellectual disability. Short stature, obesity, microcephaly, strabismus, nystagmus, reduced visual acuity, lactic acidosis, and a brain neuropathology consistent with Leigh syndrome are also reported.","definition_xrefs":["Orphanet:319524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1646555","DOID:0111491","OMIM:614947","SCTID:763203009","GARD:17456","UMLS:C4706313"],"synonyms":[{"name":"COXPD15","type":"exact"},{"name":"MTFMT combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation defect type 15","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 15","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in MTFMT","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 15","type":"exact"}],"termid":"MONDO:0013987","terms_by_termid":{"MONDO:0013987":null},"xrefs":{"Monarch":{"xref_id":"0013987"}}}


id: PBO:0081419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 275","termid":"PBO:0081419"}


id: MONDO:0002001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease of cellular proliferation (obsolete MONDO:0002001)","termid":"MONDO:0002001","xrefs":{"Monarch":{"xref_id":"0002001"}}}


id: GO:0009595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a biotic stimulus, one caused or produced by a living organism, is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of biotic stimulus","secondary_identifiers":["GO:0009596"],"synonyms":[{"name":"perception of biotic stimulus","type":"related"}],"termid":"GO:0009595"}


id: MONDO:0005732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diphyllobothriasis (obsolete MONDO:0005732)","termid":"MONDO:0005732","xrefs":{"Monarch":{"xref_id":"0005732"}}}


id: GO:0010047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to the spontaneous opening of the fruit permitting the escape of seeds.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehiscence","termid":"GO:0009900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit dehiscence","termid":"GO:0010047"}


id: GO:0031828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2C serotonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 2C serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 2C receptor binding","type":"exact"},{"name":"type 2C serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031828"}


id: GO:1905359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a meiotic spindle.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:26696398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to meiotic spindle","synonyms":[{"name":"protein localisation to meiotic spindle","type":"exact"}],"termid":"GO:1905359"}


id: PBO:0067479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 612, pseudogene","termid":"PBO:0067479"}


id: PBO:0116407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar/ prevavuolar endosome sodium/potassium ion/proton antiporter Nhx1","termid":"PBO:0116407"}


id: GO:1902473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to synapse.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:22588719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to synapse","synonyms":[{"name":"regulation of protein localisation to synapse","type":"exact"}],"termid":"GO:1902473"}


id: MONDO:0010998
data:
  {"annotated_genes":["SJAG_04952"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86855],"is_not":false,"summary":null,"term":"MONDO:0010998"}]},"cv_name":"mondo","definition":"A form of congenital disorders of N-linked glycosylation characterized by severe neurological involvement, including hypotonia, developmental delay, intellectual disability, postnatal microcephaly, and progressive brain and cerebellar atrophy. Epilepsy with hypsarrythmia is frequently reported. Additional features that may be observed include failure to thrive, arthrogryposis multiplex congenita (AMC), vision impairment (optic atrophy, iris coloboma) and facial dysmorphism (hypertelorism with a broad nasal bridge, large and thick ears, thin lips, micrognathia). The disease is caused by loss of function mutations of the gene ALG3 (3q27.3).","definition_xrefs":["Orphanet:79321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04952":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"ALG3-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:601110","NCIT:C126870","GARD:9827","UMLS:C1832736","SCTID:720976009","DOID:0080556","MESH:C535742","MEDGEN:322026"],"synonyms":[{"name":"ALG3-CDG","type":"exact"},{"name":"ALG3-CDG (CDG-Id)","type":"related"},{"name":"ALG3-congenital disorder of glycosylation","type":"exact"},{"name":"CDG 1D","type":"related"},{"name":"CDG Id","type":"related"},{"name":"CDG syndrome type Id","type":"exact"},{"name":"CDG-Id","type":"exact"},{"name":"CDG1D","type":"exact"},{"name":"CDGId","type":"exact"},{"name":"CDGS, type IV","type":"related"},{"name":"CDGS, type IV, formerly","type":"related"},{"name":"CDGS4 (formerly)","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type Id","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type IV (formerly)","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type IV","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type IV, formerly","type":"related"},{"name":"congenital disorder of glycosylation type 1d","type":"exact"},{"name":"congenital disorder of glycosylation type Id","type":"exact"},{"name":"congenital disorder of glycosylation, type Id","type":"related"},{"name":"mannosyltransferase 6 deficiency","type":"exact"}],"termid":"MONDO:0010998","terms_by_termid":{"MONDO:0010998":null},"xrefs":{"Monarch":{"xref_id":"0010998"}}}


id: PBO:0040018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 7","termid":"PBO:0040018"}


id: MONDO:0006336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endometrioid adenocarcinoma that arises from the ovary and exhibits squamous differentiation. The squamous cell component often has a cytologically benign appearance.","definition_xrefs":["NCIT:C40061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian endometrioid adenocarcinoma","termid":"MONDO:0006335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian endometrioid adenocarcinoma with squamous differentiation","secondary_identifiers":["UMLS:C2212017","MEDGEN:389178","EFO:1000417"],"synonyms":[{"name":"ovarian adenoacanthoma","type":"exact"},{"name":"ovarian adenosquamous carcinoma","type":"exact"},{"name":"ovarian endometrioid adenocarcinoma with squamous differentiation","type":"exact"}],"termid":"MONDO:0006336","xrefs":{"Monarch":{"xref_id":"0006336"}}}


id: GO:0140345
data:
  {"annotated_genes":["SJAG_02897","SJAG_01731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94767,98256],"is_not":false,"summary":null,"term":"GO:0140345"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylcholine from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:11870854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine transporter activity","termid":"GO:0008525"},{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140303","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"phosphatidylcholine flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylcholine flippase activity (exoplasmic to cytosolic leaflet)","type":"exact"}],"termid":"GO:0140345","terms_by_termid":{"GO:0140345":null}}


id: MONDO:0010719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation sensitivity of natural killer activity","secondary_identifiers":["OMIM:312210","MEDGEN:333311","UMLS:C1839408","MESH:C564066"],"synonyms":[{"name":"X-Ray Nk sensitivity","type":"related"},{"name":"radiation sensitivity of natural killer activity","type":"exact"}],"termid":"MONDO:0010719","xrefs":{"Monarch":{"xref_id":"0010719"}}}


id: PBO:0088059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase (E3); controls septin dynamics and spindle position checkpoint (SPOC) with ligase Dma1p by regulating recruitment of Elm1p to bud neck; regulates levels of eIF2 subunit Gcd11p, as well as abundance, localization, and ubiquitination of Cdk inhibitory kinase Swe1p; ortholog of human RNF8, similar to human Chfr; contains FHA and RING finger domains; DMA2 has a paralog, DMA1, that arose from the whole genome duplication","termid":"PBO:0088059"}


id: PBO:0002350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol-4-phosphate 5-kinase Its3","termid":"PBO:0002350"}


id: GO:0061788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Epidermal Growth Factor (EGF) repeats.","definition_xrefs":["GOC:25700513","PMID:25155514","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"EGF repeat binding","synonyms":[{"name":"Epidermal Growth Factor repeat binding","type":"related"},{"name":"Epidermal growth factor domain binding","type":"broad"}],"termid":"GO:0061788"}


id: PBO:0076563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3D","termid":"PBO:0076563"}


id: GO:0075108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont stops, prevents, or reduces the frequency, rate or extent of the host adenylate cyclase activity, which catalyze the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host adenylate cyclase activity (obsolete GO:0075108)","synonyms":[{"name":"Negative regulation by symbiont of host 3',5'-cyclic AMP synthetase activity","type":"exact"},{"name":"Negative regulation by symbiont of host ATP diphosphate-lyase (cyclizing ; 3',5'-cyclic-AMP-forming) activity","type":"exact"},{"name":"Negative regulation by symbiont of host ATP diphosphate-lyase (cyclizing) activity","type":"exact"},{"name":"Negative regulation by symbiont of host ATP pyrophosphate-lyase activity","type":"exact"},{"name":"Negative regulation by symbiont of host adenyl cyclase activity","type":"exact"},{"name":"Negative regulation by symbiont of host adenylyl cyclase activity","type":"exact"},{"name":"Negative regulation by symbiont of host adenylylcyclase activity","type":"exact"},{"name":"Negative regulation by symbiont of host cAMP generating peptide activity","type":"related"}],"termid":"GO:0075108"}


id: GO:0045259
data:
  {"annotated_genes":["SJAG_MIT09","SJAG_03114","SJAG_00836","SJAG_07003","SJAG_00985","SJAG_02105","SJAG_04122","SJAG_00542","SJAG_00133","SJAG_00915","SJAG_02564","SJAG_02598","SJAG_00438","SJAG_05204","SJAG_03925","SJAG_MIT15","SJAG_MIT37"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57295,57853,60043,60506,64005,64509,65241,66809,67131,67462,95180,103994,108209,116146,119360,119366,119371],"is_not":false,"summary":null,"term":"GO:0045259"}]},"cv_name":"cellular_component","definition":"A proton-transporting two-sector ATPase complex that catalyzes the phosphorylation of ADP to ATP during oxidative phosphorylation. The complex comprises a membrane sector (F0) that carries out proton transport and a cytoplasmic compartment sector (F1) that catalyzes ATP synthesis by a rotational mechanism; the extramembrane sector (containing 3 a and 3 b subunits) is connected via the d-subunit to the membrane sector by several smaller subunits. Within this complex, the g and e subunits and the 9-12 c subunits rotate by consecutive 120 degree angles and perform parts of ATP synthesis. This movement is driven by the hydrogen ion electrochemical potential gradient.","definition_xrefs":["ISBN:0716743663","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"},{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting ATP synthase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0045255"],"synonyms":[{"name":"F1-F0 complex","type":"exact"},{"name":"hydrogen-translocating F-type ATPase complex","type":"exact"},{"name":"hydrogen-transporting ATP synthase complex","type":"exact"},{"name":"proton-transporting F-type ATPase complex","type":"related"}],"termid":"GO:0045259","terms_by_termid":{"GO:0045259":null}}


id: PR:Q9Y7J5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1778.09 gene.","definition_xrefs":["UniProtKB:Q9Y7J5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC domain-containing protein C1778.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.09","synonyms":[{"name":"Spom972h-SPBC1778.09","type":"exact"}],"termid":"PR:Q9Y7J5"}


id: GO:0071128
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha5-beta1 integrin complex bound to osteopontin.","definition_xrefs":["PMID:16005200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha5-beta1 integrin-osteopontin complex","synonyms":[{"name":"ITGA5-ITGB1-SPP1 complex","type":"narrow"}],"termid":"GO:0071128"}


id: MONDO:0008039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tropical spastic paraparesis is a chronic systemic immune-mediated inflammatory myeloneuropathy, more frequently reported in women than in men, that usually presents in adulthood with slowly progressive spastic paraparesis of the lower limbs, bladder and bowel dysfunction, and sensory disturbances in the lower extremities (e.g. paresthesia and dysesthesia) and that is associated with a human T-cell lymphotropic virus type 1 (HTLV-1) infection.","definition_xrefs":["Orphanet:289326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human T-lymphotropic virus 1 infectious disease","termid":"MONDO:0005801"},{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropical spastic paraparesis","secondary_identifiers":["MEDGEN:18298","DOID:321","OMIM:159580","UMLS:C0030481","SCTID:714279000","NANDO:1200206","icd11.foundation:1043229589","ICD9:323.01","EFO:0007527","GARD:8208","MedDRA:10044696","MESH:D015493"],"synonyms":[{"name":"HAM/TSP","type":"exact"},{"name":"HTLV-1 associated myelopathy/tropical spastic paraparesis","type":"related"},{"name":"HTLV-1-associated myelopathy/tropical spastic paraparesis","type":"exact"},{"name":"HTLV-associated myelopathy","type":"exact"},{"name":"Human T-cell leukaemia virus type 1 associated myelopathy/tropical spastic paraparesis","type":"related"},{"name":"Human T-cell leukemia virus type 1 associated myelopathy/tropical spastic paraparesis","type":"related"},{"name":"Human T-lymphotropic virus type I-associated myelopathy/tropical spastic paraparesis","type":"exact"},{"name":"Human T-lymphotropic virus type-1-associated myelopathy/tropical spastic paraparesis","type":"exact"},{"name":"TSP","type":"exact"},{"name":"familial spastic paraparesis, HTLV-1-associated","type":"related"},{"name":"ham","type":"related"},{"name":"ham/TSP","type":"exact"},{"name":"myelopathy, HTLV-1-associated","type":"related"},{"name":"tropical spastic paralysis","type":"exact"},{"name":"tropical spastic paraparesis (formerly)","type":"related"},{"name":"tropical spastic paraplegia","type":"exact"}],"termid":"MONDO:0008039","xrefs":{"Monarch":{"xref_id":"0008039"}}}


id: GO:0000834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate = ADP + 5,6-bisdiphosphoinositol-1D-myo-inositol (1,2,3,4)tetrakisphosphate.","definition_xrefs":["PMID:16429326","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol pentakisphosphate kinase activity","termid":"GO:0000829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"5-diphosphoinositol pentakisphosphate 6-kinase activity","synonyms":[{"name":"inositol heptakisphosphate 6-kinase activity","type":"broad"}],"termid":"GO:0000834"}


id: PBO:0069959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1252, pseudogene","termid":"PBO:0069959"}


id: GO:0046365
data:
  {"annotated_genes":["SJAG_03958","SJAG_04276","SJAG_00461","SJAG_02009","SJAG_02010","SJAG_06622","SJAG_04192","SJAG_01310","SJAG_04660","SJAG_02954","SJAG_00839","SJAG_06621","SJAG_02945","SJAG_00605","SJAG_04495","SJAG_00027","SJAG_03828","SJAG_03660","SJAG_02107","SJAG_02796","SJAG_03903","SJAG_03818","SJAG_02950","SJAG_02135","SJAG_03174","SJAG_03373","SJAG_02951","SJAG_02369","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96084,101500,95356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[95352,98318,109698,103954,109702,105778,94863,109703,109699,116652,106147,103698,105777,109697,105776,98590,109701,78210,106146,109700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[58628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[95358,96085,101501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[114036,114024,114018,114025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033499"},{"annotations":[119325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02010":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03174":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03818":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03958":null,"SJAG_04192":null,"SJAG_04276":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04660":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"monosaccharide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"monosaccharide breakdown","type":"exact"},{"name":"monosaccharide catabolism","type":"exact"},{"name":"monosaccharide degradation","type":"exact"}],"termid":"GO:0046365","terms_by_termid":{"GO:0005998":null,"GO:0019303":null,"GO:0019568":null,"GO:0033499":null,"GO:0042843":null,"GO:0061621":null}}


id: PBO:0081518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF426 divergent transcript","termid":"PBO:0081518"}


id: GO:0019524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of keto-D-gluconate, the anion of keto-D-gluconic acid, an aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keto-D-gluconate metabolic process","termid":"GO:0019525"},{"relation_name":"is_a","term_name":"ketogluconate catabolic process","termid":"GO:0046181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"keto-D-gluconate catabolic process","secondary_identifiers":["MetaCyc:DHGLUCONATE-PYR-CAT-PWY"],"synonyms":[{"name":"keto-D-gluconate breakdown","type":"exact"},{"name":"keto-D-gluconate catabolism","type":"exact"},{"name":"keto-D-gluconate degradation","type":"exact"}],"termid":"GO:0019524"}


id: MONDO:0005804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormally high level of prolactin in the blood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpituitarism","termid":"MONDO:0006793"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperprolactinemia","secondary_identifiers":["UMLS:C0020514","ICD9:253.1","EFO:0007319","SCTID:237662005","HP:0000870","MEDGEN:5698","MESH:D006966","NANDO:2200322","ICD10CM:E22.1","NANDO:2100115"],"synonyms":[{"name":"hyperprolactinaemia","type":"exact"},{"name":"hyperprolactinemia","type":"exact"},{"name":"hyperprolactinemia (disease)","type":"exact"},{"name":"hyperprolactinemias","type":"related"},{"name":"hypersecretion syndrome, prolactin","type":"related"},{"name":"inappropriate prolactin secretion","type":"related"},{"name":"inappropriate prolactin secretion syndrome","type":"related"},{"name":"inappropriate secretion prolactin","type":"related"},{"name":"prolactin hypersecretion syndrome","type":"related"},{"name":"prolactin secretion, inappropriate","type":"related"},{"name":"prolactin, inappropriate secretion","type":"related"},{"name":"secretion prolactin, inappropriate","type":"related"},{"name":"secretion, inappropriate prolactin","type":"related"},{"name":"syndrome, prolactin hypersecretion","type":"related"}],"termid":"MONDO:0005804","xrefs":{"Monarch":{"xref_id":"0005804"}}}


id: MONDO:0100207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy starting in the first 12 months of life, including self-limiting and refractory seizures, and epilepsies with and without developmental disorders.","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"infantile-onset epilepsy","termid":"MONDO:0100207","xrefs":{"Monarch":{"xref_id":"0100207"}}}


id: GO:0003713
data:
  {"annotated_genes":["SJAG_03107","SJAG_02494","SJAG_00184","SJAG_00613","SJAG_02066","SJAG_03981","SJAG_01193","SJAG_04820","SJAG_03945","SJAG_01475","SJAG_03573","SJAG_03622","SJAG_03752","SJAG_02401","SJAG_02849","SJAG_02773","SJAG_00156","SJAG_02541","SJAG_01778","SJAG_01771","SJAG_02927","SJAG_03776","SJAG_00904","SJAG_04647","SJAG_00909","SJAG_03668","SJAG_01952","SJAG_05203","SJAG_06638","SJAG_00269","SJAG_00822","SJAG_03590","SJAG_02671","SJAG_01113","SJAG_00641","SJAG_00164","SJAG_03441","SJAG_02474","SJAG_01658","SJAG_05341","SJAG_02391","SJAG_02196","SJAG_01711","SJAG_00342","SJAG_04705","SJAG_01728","SJAG_00297","SJAG_04205","SJAG_01157","SJAG_05153","SJAG_03599","SJAG_01403","SJAG_00087","SJAG_04274","SJAG_00584","SJAG_02458","SJAG_04613","SJAG_04099","SJAG_03924"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57834,62152,62266,71964,73665,75294,75660,75964,77484,77996,78623,78951,88837,89455,89628,90708,91021,91759,93841,94427,94682,94789,95421,95718,96197,96495,98147,98902,99000,99349,99619,100812,102273,103175,103484,103681,103730,103930,103991,106095,106557,106691,107047,107220,107375,107643,107729,108545,109035,109061,112603,113284,114614,115039,117871,117918,119234,119396,119397],"is_not":false,"summary":null,"term":"GO:0003713"}]},"cv_name":"molecular_function","definition":"A transcription coregulator activity that activates or increases the transcription of specific gene sets via binding to a DNA-binding transcription factor at a specific genomic locus, either on its own or as part of a complex. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coactivators modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators. A fourth class of coactivator activity is the bridging of a DNA-binding transcription factor to the general (basal) transcription machinery. The Mediator complex, which bridges sequence-specific DNA binding transcription factors and RNA polymerase, is also a transcription coactivator.","definition_xrefs":["PMID:10213677","PMID:16858867","GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription coregulator activity","termid":"GO:0003712"}],"gene_count":59,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00156":null,"SJAG_00164":null,"SJAG_00184":null,"SJAG_00269":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00584":null,"SJAG_00613":null,"SJAG_00641":null,"SJAG_00822":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01113":null,"SJAG_01157":null,"SJAG_01193":null,"SJAG_01403":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01728":null,"SJAG_01771":null,"SJAG_01778":null,"SJAG_01952":null,"SJAG_02066":null,"SJAG_02196":null,"SJAG_02391":null,"SJAG_02401":null,"SJAG_02458":null,"SJAG_02474":null,"SJAG_02494":null,"SJAG_02541":null,"SJAG_02671":null,"SJAG_02773":null,"SJAG_02849":null,"SJAG_02927":null,"SJAG_03107":null,"SJAG_03441":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03599":null,"SJAG_03622":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_03924":null,"SJAG_03945":null,"SJAG_03981":null,"SJAG_04099":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04613":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05153":null,"SJAG_05203":null,"SJAG_05341":null,"SJAG_06638":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003712"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0003712","GO:0140110","GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"transcription coactivator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001105"],"synonyms":[{"name":"RNA polymerase II transcription co-activator activity","type":"related"},{"name":"RNA polymerase II transcription coactivator activity","type":"related"},{"name":"RNA polymerase II transcription mediator activity","type":"related"},{"name":"transcription co-activator activity","type":"exact"}],"termid":"GO:0003713","terms_by_termid":{"GO:0003713":null}}


id: MONDO:0019872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 3p is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the short arm of chromosome 3, with highly variable phenotype principally characterized by craniofacial dysmorphism (incl. brachy-/microcephaly, square facies, frontal bossing, bitemporal indentation, hypertelorism/telecanthus, low-set and/or dysmorphic ears, short nose with broad, flat nasal bridge, prominent cheeks and philtrum, downturned corners of mouth, micrognathia/retrognathia, short neck) associated with psychomotor delay, moderate to severe intellectual disability, cardiac (e.g. patent ductus arteriosus) and urogenital (e.g. renal hypoplasia, hypogenitalism) abnormalities, as well as seizures and presence of whorls on fingers.","definition_xrefs":["Orphanet:96071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 3","termid":"MONDO:0016940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 3p","secondary_identifiers":["SCTID:764519007","GARD:19305","UMLS:C4706938","MEDGEN:1637379"],"synonyms":[{"name":"distal duplication 3p","type":"exact"},{"name":"distal trisomy type 3p","type":"exact"},{"name":"telomeric duplication 3p","type":"exact"},{"name":"trisomy 3pter","type":"exact"}],"termid":"MONDO:0019872","xrefs":{"Monarch":{"xref_id":"0019872"}}}


id: MONDO:0017250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary airway malformation","termid":"MONDO:0016580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary airway malformation type 2","secondary_identifiers":["Orphanet:280840","UMLS:C5437761","GARD:21095","MEDGEN:1738105","icd11.foundation:1921224131"],"synonyms":[{"name":"CCAM type 2","type":"exact"},{"name":"CPAM type 2","type":"exact"},{"name":"congenital cystic adenomatoid malformation of the lung type 2","type":"exact"},{"name":"congenital cystic adenomatous malformation of the lung type 2","type":"exact"},{"name":"congenital cystic disease of the lung type 2","type":"exact"}],"termid":"MONDO:0017250","xrefs":{"Monarch":{"xref_id":"0017250"}}}


id: PBO:0060357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYOCD antisense RNA 1","termid":"PBO:0060357"}


id: GO:0035867
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to insulin-like growth factor-1 (IGF-1) and type I insulin-like growth factor receptor (IGF1R). IGF1R is a heterotetramer that consists of two alpha-subunits and two beta-subunits.","definition_xrefs":["GOC:ebc","PMID:19578119","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphav-beta3 integrin-IGF-1-IGF1R complex","termid":"GO:0035867"}


id: MONDO:0044916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rhabdoid tumor which arises in the soft tissues. It occurs in infants and children and may be associated with loss of chromosome 22. It is characterized by the presence of cells with a large eccentric nucleus, prominent nucleolus, and abundant cytoplasm.","definition_xrefs":["NCIT:C6586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdoid tumor","termid":"MONDO:0002728"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"extrarenal rhabdoid tumor","secondary_identifiers":["SCTID:404089007","UMLS:C1304517","MEDGEN:224918"],"synonyms":[{"name":"extrarenal rhabdoid tumor","type":"exact"},{"name":"malignant extrarenal rhabdoid neoplasm","type":"exact"},{"name":"rhabdoid tumor of soft tissue","type":"exact"},{"name":"rhabdoid tumour of soft tissue","type":"exact"}],"termid":"MONDO:0044916","xrefs":{"Monarch":{"xref_id":"0044916"}}}


id: MOD:01636
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-glutamic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamic acid removal","termid":"MOD:01636"}


id: GO:0061051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle hypertrophy","termid":"GO:0010613"},{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle tissue growth","termid":"GO:0055023"},{"relation_name":"is_a","term_name":"regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061050"},{"relation_name":"positively_regulates","term_name":"cell growth involved in cardiac muscle cell development","termid":"GO:0061049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061051"}


id: MONDO:0006343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the ovary and is characterized by the presence of malignant epithelial cells that resemble malignant urothelial cells. There is no morphologic evidence of a benign or borderline Brenner tumor component present.","definition_xrefs":["NCIT:C5240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian carcinoma","termid":"MONDO:0005140"},{"relation_name":"is_a","term_name":"transitional cell carcinoma","termid":"MONDO:0006474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian transitional cell carcinoma","secondary_identifiers":["DOID:4000","EFO:1000435","MEDGEN:233811","UMLS:C1335184"],"synonyms":[{"name":"malignant ovarian transitional cell neoplasm","type":"exact"},{"name":"ovarian transitional cell cancer","type":"exact"},{"name":"ovarian transitional cell carcinoma","type":"exact"},{"name":"ovarian transitional cell neoplasm","type":"related"},{"name":"ovary transitional cell carcinoma","type":"exact"},{"name":"transitional cell carcinoma of ovary","type":"exact"},{"name":"transitional cell carcinoma of the ovary","type":"exact"}],"termid":"MONDO:0006343","xrefs":{"Monarch":{"xref_id":"0006343"}}}


id: PBO:0066356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 3","termid":"PBO:0066356"}


id: PBO:0091176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siva family protein","termid":"PBO:0091176"}


id: MONDO:0015542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophagocytic lymphohistiocytosis due to infections, autoimmune disorders, or underlying malignancies. Signs and symptoms include fever, lymphadenopathy, hepatomegaly, splenomegaly, and pancytopenia.","definition_xrefs":["NCIT:C121184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophagocytic syndrome","termid":"MONDO:0015540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"secondary hemophagocytic lymphohistiocytosis","secondary_identifiers":["MEDGEN:883550","UMLS:C4054044","GARD:20026","Orphanet:158041"],"synonyms":[{"name":"acquired hemophagocytic lymphohistiocytosis","type":"exact"},{"name":"acquired hemophagocytic syndrome","type":"exact"},{"name":"reactive hemophagocytic syndrome","type":"exact"}],"termid":"MONDO:0015542","xrefs":{"Monarch":{"xref_id":"0015542"}}}


id: PBO:0087460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a heterodimeric NC2 transcription regulator complex; complex binds to TBP and can repress transcription by preventing preinitiation complex assembly or stimulate activated transcription; homologous to human NC2alpha; complex also includes Ncb2p; bur6 ncb2 double mutation is functionally complemented by coexpression of human DRAP1 and DR1, although the single bur6 mutation is not complemented by its ortholog DRAP1","termid":"PBO:0087460"}


id: PBO:0058940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocyte inducing transcription factor","termid":"PBO:0058940"}


id: MOD:01628
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms (2-aminosuccinimidyl)acetic acid by crosslinking either an aspartic acid residue or an asparagine residue with the following glycine residue.","definition_xrefs":["PubMed:18688235","PubMed:10801322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-aminosuccinimide ring crosslinked residues","termid":"MOD:01944"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2-aminosuccinimidyl)acetic acid","termid":"MOD:01628"}


id: SO:0001520
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of a translocation, which is then a region of nucleotide sequence that has translocated to a new position. The observed adjacency of two previously separated regions.","direct_ancestors":[{"relation_name":"is_a","term_name":"alteration_attribute","termid":"SO:0001508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocaton_attribute","synonyms":[{"name":"translocation attribute","type":"exact"}],"termid":"SO:0001520"}


id: PBO:0003919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide mc 1","termid":"PBO:0003919"}


id: PBO:0043400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMKLR2 antisense RNA","termid":"PBO:0043400"}


id: MONDO:0007916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary intestinal lymphangiectasia (PIL) is a rare intestinal disease characterized by dilated intestinal lacteals which cause lymph leakage into the small bowel lumen. Clinical manifestations include edema related to hypoalbuminemia (protein-losing enteropathy), asthenia, diarrhea, lymphedema and failure to thrive in children.","definition_xrefs":["Orphanet:90362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal lymphangiectasia","termid":"MONDO:0018178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"primary intestinal lymphangiectasia","secondary_identifiers":["icd11.foundation:52162548","GARD:7873","MEDGEN:444009","SCTID:6124009","NORD:1609","OMIM:152800","UMLS:C2931241","ICD9:457.1"],"synonyms":[{"name":"Waldmann disease","type":"exact"},{"name":"Waldmann's disease","type":"related"},{"name":"familial Waldmann's disease (type)","type":"related"},{"name":"lymphangiectasia, intestinal","type":"related"},{"name":"primary intestinal lymphangiectasis","type":"related"}],"termid":"MONDO:0007916","xrefs":{"Monarch":{"xref_id":"0007916"}}}


id: MONDO:1010489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, dog","secondary_identifiers":["OMIA:001041-9615"],"termid":"MONDO:1010489","xrefs":{"Monarch":{"xref_id":"1010489"}}}


id: GO:0060148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the inactivation of gene expression by a posttranscriptional mechanism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing","termid":"GO:0060147"},{"relation_name":"positively_regulates","term_name":"post-transcriptional gene silencing","termid":"GO:0016441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of post-transcriptional gene silencing","synonyms":[{"name":"positive regulation of posttranscriptional gene silencing","type":"exact"}],"termid":"GO:0060148"}


id: PBO:0091699
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human Sgt1","termid":"PBO:0091699"}


id: GO:0046334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of octopamine, 1-(p-hydroxyphenyl)-2-aminoethanol. The D enantiomer is about one-tenth as active as norepinephrine and is found in the salivary glands of Octopus and Eledone species.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"biogenic amine catabolic process","termid":"GO:0042402"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"octopamine metabolic process","termid":"GO:0046333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"octopamine catabolic process","synonyms":[{"name":"octopamine breakdown","type":"exact"},{"name":"octopamine catabolism","type":"exact"},{"name":"octopamine degradation","type":"exact"}],"termid":"GO:0046334"}


id: GO:0140666
data:
  {"annotated_genes":["SJAG_03780","SJAG_03682","SJAG_00871","SJAG_01643","SJAG_03832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116218,113699,112835,103497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990814"},{"annotations":[107622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033592"}]},"cv_name":"molecular_function","definition":"An activity that facilitates the formation of a complementary double-stranded polynucleotide molecule.","definition_xrefs":["PMID:22888405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid binding","termid":"GO:0003676"},{"relation_name":"is_a","term_name":"nucleic acid conformation isomerase activity","termid":"GO:0120545"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a nucleic acid","termid":"GO:0140640"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_01643":null,"SJAG_03682":null,"SJAG_03780":null,"SJAG_03832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0005488","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"annealing activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097617","Reactome:R-HSA-5686642"],"synonyms":[{"name":"renaturation","type":"related"}],"termid":"GO:0140666","terms_by_termid":{"GO:0033592":null,"GO:1990814":null}}


id: PBO:0056563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance 10 replication initiation factor","termid":"PBO:0056563"}


id: PBO:0028003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_elongated_cell_with_abnormal_nuclear_morphology","termid":"PBO:0028003"}


id: PBO:0079932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen III synthase","termid":"PBO:0079932"}


id: PBO:0005772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin family glycoprotien receptor (predicted)","termid":"PBO:0005772"}


id: GO:0050481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-mandelate + 5,6,7,8-tetrahydrobiopterin + O2 = (S)-4-hydroxymandelate + 7,8-dihydrobiopterin + H2O. (S)-2-hydroxy-2-phenylacetate is also known as S-mandelate.","definition_xrefs":["EC:1.14.16.6","RHEA:21716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen","termid":"GO:0016714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mandelate 4-monooxygenase activity","secondary_identifiers":["MetaCyc:MANDELATE-4-MONOOXYGENASE-RXN","KEGG_REACTION:R03794"],"synonyms":[{"name":"(S)-2-hydroxy-2-phenylacetate,tetrahydrobiopterin:oxygen oxidoreductase (4-hydroxylating)","type":"related"},{"name":"L-mandelate 4-hydroxylase activity","type":"exact"},{"name":"mandelic acid 4-hydroxylase activity","type":"related"}],"termid":"GO:0050481"}


id: PBO:0065148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 1","termid":"PBO:0065148"}


id: SO:0002203
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide site from which replication initiates.","definition_xrefs":["NCBI:cf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication_start_site","synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_note:replication_start_site","type":"exact"},{"name":"replication start site","type":"exact"}],"termid":"SO:0002203"}


id: MONDO:0012211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The CDG (Congenital Disorders of Glycosylation) syndromes are a group of autosomal recessive disorders affecting glycoprotein synthesis. CDG syndrome type If is characterized by psychomotor delay, seizures, failure to thrive, and cutaneous and ocular anomalies.","definition_xrefs":["Orphanet:79323"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"MPDU1-congenital disorder of glycosylation","secondary_identifiers":["MESH:C535744","OMIM:609180","UMLS:C1836669","GARD:9832","NCIT:C126872","SCTID:724096007","MEDGEN:322968","DOID:0080558"],"synonyms":[{"name":"CDG 1F","type":"related"},{"name":"CDG If","type":"related"},{"name":"CDG syndrome type If","type":"exact"},{"name":"CDG-If","type":"exact"},{"name":"CDG1F","type":"exact"},{"name":"CDGIf","type":"exact"},{"name":"MPDU1-CDG","type":"exact"},{"name":"MPDU1-CDG (CDG-If)","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type If","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1F","type":"related"},{"name":"congenital disorder of glycosylation type 1f","type":"exact"},{"name":"congenital disorder of glycosylation type If","type":"exact"},{"name":"congenital disorder of glycosylation, type If","type":"related"}],"termid":"MONDO:0012211","xrefs":{"Monarch":{"xref_id":"0012211"}}}


id: MOD:01164
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a riboflavin phosphate (flavin mononucleotide, FMN) group through a phosphodiester bond.","definition_xrefs":["Unimod:442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin-phosphoryl","synonyms":[{"name":"FMN","type":"related"},{"name":"O3-(riboflavin phosphoryl)","type":"related"}],"termid":"MOD:01164"}


id: GO:1900219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in metanephric nephron tubule development.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10","GOC:TermGenie","PMID:17314325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in metanephric nephron tubule development","termid":"GO:1900217"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in metanephric nephron tubule development","termid":"GO:1900205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in metanephric nephron tubule development","synonyms":[{"name":"activation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"activation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"activation of apoptotic process involved in metanephric nephron tubule development","type":"narrow"},{"name":"activation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"activation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"activation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"activation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"activation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"activation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"positive regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"positive regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"positive regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"positive regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"positive regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"positive regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"positive regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"positive regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"up regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"up regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"up regulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"up regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"up regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"up regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"up regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"up regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"up regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"up-regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"up-regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"up-regulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"up-regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"up-regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"up-regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"up-regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"up-regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"up-regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"upregulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"upregulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"upregulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"upregulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"upregulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"upregulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"upregulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"upregulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"upregulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"}],"termid":"GO:1900219"}


id: GO:0019605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any butyrate, the anions of butyric acid (butanoic acid), a saturated, unbranched aliphatic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"butyrate metabolic process","secondary_identifiers":["GO:0043437"],"synonyms":[{"name":"butanoic acid metabolic process","type":"exact"},{"name":"butanoic acid metabolism","type":"exact"},{"name":"butyrate metabolism","type":"exact"},{"name":"butyric acid metabolic process","type":"exact"},{"name":"butyric acid metabolism","type":"exact"}],"termid":"GO:0019605"}


id: PBO:0074264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO5A1 antisense RNA 1","termid":"PBO:0074264"}


id: GO:0010756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of plasminogen activation. Plasminogen activation is the process in which plasminogen is processed to plasmin.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasminogen activation","termid":"GO:0010755"},{"relation_name":"is_a","term_name":"positive regulation of protein processing","termid":"GO:0010954"},{"relation_name":"positively_regulates","term_name":"plasminogen activation","termid":"GO:0031639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"positive regulation of plasminogen activation","termid":"GO:0010756"}


id: GO:0016296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexadecanoyl-[ACP] + H2O = H+ + hexadecanoate + holo-[ACP].","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete palmitoyl-[acyl-carrier-protein] hydrolase activity (obsolete GO:0016296)","synonyms":[{"name":"palmitoyl-ACP hydrolase activity","type":"exact"},{"name":"palmitoyl-[acyl-carrier protein] hydrolase activity","type":"exact"}],"termid":"GO:0016296"}


id: GO:0072417
data:
  {"annotated_genes":["SJAG_03048","SJAG_04140","SJAG_01805","SJAG_00082","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102696,94147,111510,116979,90342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of spindle checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to spindle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to signal involved in spindle checkpoint","type":"exact"},{"name":"spindle checkpoint effector process","type":"exact"}],"termid":"GO:0072417","terms_by_termid":{"GO:0140429":null}}


id: GO:0033001
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of an Fc-gamma RIII alpha chain and an Fc-epsilon RI gamma chain dimer with or without an Fc-epsilon RI beta chain and additional signaling components. The complex functions primarily as an activating receptor for IgG.","definition_xrefs":["ISBN:0781735149","PMID:11244038","GOC:add","PMID:12413532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor complex","termid":"GO:0032997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"Fc-gamma receptor III complex","synonyms":[{"name":"FcgRIII complex","type":"exact"},{"name":"IgG receptor complex","type":"broad"},{"name":"immunoglobulin G receptor complex","type":"broad"}],"termid":"GO:0033001"}


id: PBO:0060841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament light chain","termid":"PBO:0060841"}


id: MONDO:0015365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant form of hereditary sensory and autonomic neuropathy.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant hereditary sensory and autonomic neuropathy (obsolete MONDO:0015365)","secondary_identifiers":["Orphanet:140474"],"synonyms":[{"name":"hereditary sensory and autonomic neuropathy, autosomal dominant","type":"exact"}],"termid":"MONDO:0015365","xrefs":{"Monarch":{"xref_id":"0015365"}}}


id: GO:0106293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + H+ + O2 = NAD + hydrogen peroxide (H2O2).","definition_xrefs":["RHEA:11264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD(P)H oxidase H2O2-forming activity","termid":"GO:0016174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NADH oxidase H202-forming activity","termid":"GO:0106293"}


id: MONDO:0012741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial prostate cancer in which the cause of the disease is a mutation in the EHBP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 12","secondary_identifiers":["GARD:15529","MEDGEN:437216","MESH:C567510","UMLS:C2678479","OMIM:611868"],"synonyms":[{"name":"EHBP1 familial prostate cancer","type":"exact"},{"name":"HPC12","type":"related"},{"name":"familial prostate cancer caused by mutation in EHBP1","type":"exact"},{"name":"prostate cancer, hereditary, 12","type":"exact"},{"name":"prostate cancer, hereditary, type 12","type":"exact"}],"termid":"MONDO:0012741","xrefs":{"Monarch":{"xref_id":"0012741"}}}


id: GO:1990603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the rods of the retina gradually become fully responsive to dim light when no longer exposed to bright light.","definition_xrefs":["GOC:hjd","PMID:11420957","PMID:35268448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to absence of light","termid":"GO:0071485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dark adaptation","termid":"GO:1990603"}


id: GO:1904489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in regulation of reactive oxygen species metabolic process.","definition_xrefs":["PMID:25961505","GOC:TermGenie","GOC:kmv","GO_REF:0000063"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of reactive oxygen species metabolic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1904489)","synonyms":[{"name":"regulation of ROS metabolic process by down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of ROS metabolic process by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by negative regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by negative regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"regulation of reactive oxygen species metabolism by down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of transcription from RNA polymerase II promoter, global","type":"related"}],"termid":"GO:1904489"}


id: GO:0006346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of constitutive heterochromatin by a pathway that includes methylation of genomic DNA such as CpG islands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutive heterochromatin formation","termid":"GO:0140719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"DNA methylation-dependent constitutive heterochromatin formation","synonyms":[{"name":"DNA methylation-dependent heterochromatin assembly","type":"exact"},{"name":"DNA methylation-dependent heterochromatin formation","type":"exact"},{"name":"methylation-dependent chromatin silencing","type":"broad"},{"name":"methylation-dependent heterochromatic silencing","type":"broad"}],"termid":"GO:0006346"}


id: PBO:0116713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCGF3 antisense RNA 2","termid":"PBO:0116713"}


id: FYPO:0005130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a lower extent than wild type following exposure to heat.","definition_xrefs":["PMID:24623719","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spores sensitive to heat","termid":"FYPO:0005130"}


id: PR:O13892
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C20G4.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.08","synonyms":[{"name":"Spom972h-pdc1","type":"exact"}],"termid":"PR:O13892"}


id: PBO:0109259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120 member B","termid":"PBO:0109259"}


id: MONDO:0004803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"collagenopathy","termid":"MONDO:0004603"},{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267","MONDO:0005570"],"is_obsolete":false,"name":"disseminated eosinophilic collagen disease","secondary_identifiers":["UMLS:C0263662","MEDGEN:538043","SCTID:423486005","DOID:9499","ICD9:710.8"],"termid":"MONDO:0004803","xrefs":{"Monarch":{"xref_id":"0004803"}}}


id: PBO:0116744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4","termid":"PBO:0116744"}


id: GO:0090030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroid hormones,compounds with a 1, 2, cyclopentanoperhydrophenanthrene nucleus that act as hormones.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"}


id: MONDO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma arising from the brain.","definition_xrefs":["NCIT:C5154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain cancer","termid":"MONDO:0001657"},{"relation_name":"is_a","term_name":"central nervous system sarcoma","termid":"MONDO:0002217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brain sarcoma","secondary_identifiers":["DOID:2132","UMLS:C1332607","MEDGEN:272381"],"synonyms":[{"name":"brain sarcoma","type":"exact"},{"name":"primary brain sarcoma","type":"exact"},{"name":"sarcoma of brain","type":"exact"},{"name":"sarcoma of the brain","type":"exact"}],"termid":"MONDO:0002216","xrefs":{"Monarch":{"xref_id":"0002216"}}}


id: PATO:0001335
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mating type that indicates whether the F plasmid has integrated into the chromosome.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating type","termid":"PATO:0001895"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial mating type","termid":"PATO:0001335"}


id: PBO:0055545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2981","termid":"PBO:0055545"}


id: PBO:0071236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 77","termid":"PBO:0071236"}


id: GO:0009913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an epidermal cell, any of the cells making up the epidermis.","definition_xrefs":["GOC:sdb_2009","GOC:go_curators","GOC:tb","GOC:dph","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"epidermis development","termid":"GO:0008544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermal cell differentiation","secondary_identifiers":["GO:0043355"],"synonyms":[{"name":"hypodermal cell differentiation","type":"related"}],"termid":"GO:0009913"}


id: PBO:0051815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 1","termid":"PBO:0051815"}


id: PR:O14039
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 28S rRNA (cytosine-C(5))-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01769","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"25S rRNA (cytosine-C(5))-methyltransferase rcm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.06c","secondary_identifiers":["UniProtKB:O14039"],"synonyms":[{"name":"Spom972h-NSUN5","type":"exact"},{"name":"rRNA m(5)C methyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14039"}


id: PBO:0041528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 90","termid":"PBO:0041528"}


id: PBO:0004106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex subunit Rec8","termid":"PBO:0004106"}


id: MONDO:0010511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital bilateral absence of vas deferens","termid":"MONDO:0018801"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vas deferens, congenital bilateral aplasia of, X-linked","secondary_identifiers":["MEDGEN:934782","UMLS:C4310815","GARD:15279","DOID:0111863","OMIM:300985"],"synonyms":[{"name":"CBAVDX","type":"exact"},{"name":"congenital bilateral absence of vas deferens, X-linked","type":"exact"},{"name":"vas deferens, congenital bilateral aplasia of, X-linked","type":"exact"},{"name":"vas deferens, congenital bilateral aplasia of, X-linked; CBAVDX","type":"exact"}],"termid":"MONDO:0010511","xrefs":{"Monarch":{"xref_id":"0010511"}}}


id: PBO:0051842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor substrate 4","termid":"PBO:0051842"}


id: PBO:0062176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily M member 1","termid":"PBO:0062176"}


id: MONDO:0018353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Refractory celiac disease (RCD) is a complex autoimmune disorder much like the more common celiac disease but, unlike celiac disease, it is resistant or unresponsive to at least 12 months of treatment with a strict gluten-free diet. Gliadin, a component of the wheat storage protein gluten, together with similar proteins in barley and rye, are the villains that trigger the immune reaction in celiac disease. The diagnosis of RCD is made by exclusion, especially of any other disorder that can affect the huge number of thread-like projections that line the interior of the intestine (intestinal villi), such as intestinal lymphoma, Crohn's disease, small intestinal bacterial overgrowth or hypogammaglobulinemia.","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"refractory celiac disease","secondary_identifiers":["NORD:1653","GARD:21640","Orphanet:398063","UMLS:C4749333","EFO:0009266","ICD10CM:K90.0","MEDGEN:1670595"],"synonyms":[{"name":"intractable celiac sprue","type":"exact"},{"name":"intractable coeliac sprue","type":"exact"},{"name":"refractory CD","type":"exact"},{"name":"refractory sprue","type":"exact"},{"name":"type I refractory sprue","type":"narrow"},{"name":"type II refractory sprue","type":"narrow"}],"termid":"MONDO:0018353","xrefs":{"Monarch":{"xref_id":"0018353"}}}


id: PBO:0089216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination mediator Sfr1","termid":"PBO:0089216"}


id: PBO:0073817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 18","termid":"PBO:0073817"}


id: MONDO:0000357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete West syndrome (obsolete MONDO:0000357)","termid":"MONDO:0000357","xrefs":{"Monarch":{"xref_id":"0000357"}}}


id: PBO:0074774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3G","termid":"PBO:0074774"}


id: GO:1900189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-substrate adhesion","termid":"GO:0010811"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in single-species biofilm formation","termid":"GO:1900187"},{"relation_name":"positively_regulates","term_name":"cell adhesion involved in single-species biofilm formation","termid":"GO:0043709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"activation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"activation of cell adhesion involved in single-species biofilm formation","type":"narrow"},{"name":"positive regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"up regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"up regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"up-regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"up-regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"upregulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"upregulation of cell adhesion involved in single-species biofilm formation","type":"exact"}],"termid":"GO:1900189"}


id: PBO:0031006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_aseptate_cell","termid":"PBO:0031006"}


id: PBO:0005023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora-B kinase Ark1","termid":"PBO:0005023"}


id: PBO:0060970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transcription factor Y subunit beta","termid":"PBO:0060970"}


id: PBO:0062863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase, ubiquitin aldehyde binding 2","termid":"PBO:0062863"}


id: PBO:0001668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 5'-triphosphatase","termid":"PBO:0001668"}


id: PBO:0003341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp1 (predicted)","termid":"PBO:0003341"}


id: PBO:0062996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl arginine deiminase 2","termid":"PBO:0062996"}


id: PBO:0073012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel modifier 1","termid":"PBO:0073012"}


id: GO:0018274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine and peptidyl-serine to form a (2Xi,9S)-L-lysinoalanine cross-link.","definition_xrefs":["RESID:AA0123"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-lysinoalanine (obsolete GO:0018274)","termid":"GO:0018274"}


id: PBO:0080985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB20 antisense RNA 1","termid":"PBO:0080985"}


id: GO:0002902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte apoptotic process","termid":"GO:0070228"},{"relation_name":"regulates","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell apoptotic process","synonyms":[{"name":"regulation of B cell apoptosis","type":"narrow"}],"termid":"GO:0002902"}


id: MONDO:0043310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient complete or partial monocular blindness due to retinal ischemia. This may be caused by emboli from the CAROTID ARTERY (usually in association with CAROTID STENOSIS) and other locations that enter the central RETINAL ARTERY. (From Adams et al., Principles of Neurology, 6th ed, p245)","definition_xrefs":["MESH:D020757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blindness (disorder)","termid":"MONDO:0001941"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amaurosis fugax","secondary_identifiers":["icd11.foundation:691084626","UMLS:C0149793","MEDGEN:57702","SCTID:88032003","NCIT:C84550"],"synonyms":[{"name":"amaurosis fugax","type":"exact"},{"name":"amaurosis fugax (one sided temporary vision loss)","type":"related"},{"name":"blindness, monocular, transient","type":"related"},{"name":"blindness, transient monocular","type":"related"},{"name":"momentary blindness","type":"related"},{"name":"monocular blindness, transient","type":"related"},{"name":"transient monocular blindness","type":"related"}],"termid":"MONDO:0043310","xrefs":{"Monarch":{"xref_id":"0043310"}}}


id: GO:1905056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A calcium-transporting P-type ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration.","definition_xrefs":["PMID:22972962","GOC:TermGenie","GO_REF:0000061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type calcium transporter activity","termid":"GO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"P-type calcium transporter activity involved in regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"ATP phosphohydrolase (Ca2+-transporting) involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"ATPase-coupled calcium ion transmembrane transporter activity involved in regulation of presynaptic cytosolic calcium levels","type":"exact"},{"name":"Ca(2+)-transporting ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"Ca2+-pumping ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"Ca2+-transporting ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium ABC transporter involved in regulation of presynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium efflux ATPase involved in regulation of presynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium transporting ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium-translocating P-type ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium-transporting ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"plasma membrane Ca-ATPase involved in regulation of presynaptic cytosolic calcium ion concentration","type":"narrow"}],"termid":"GO:1905056"}


id: GO:0005688
data:
  {"annotated_genes":["SJAG_03070","SJAG_03460","SJAG_01819","SJAG_05240","SJAG_02469","SJAG_03954","SJAG_01327","SJAG_03214"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62089,71018,72119,77934,79115,79213,80388,105810],"is_not":false,"summary":null,"term":"GO:0005688"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U6, the Lsm2-8 heptameric ring complex, as well as several proteins that are unique to the U6 snRNP, most of which remain associated with the U6 snRNA both while the U6 snRNP is free or assembled into the U4/U6 snRNP or into a series of spliceosomal complexes.","definition_xrefs":["ISBN:0879695897","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01327":null,"SJAG_01819":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03214":null,"SJAG_03460":null,"SJAG_03954":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U6 snRNP","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"snRNP U6","type":"exact"}],"termid":"GO:0005688","terms_by_termid":{"GO:0005688":null}}


id: SO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one D-gene, one DJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_DJ_J_C_cluster","synonyms":[{"name":"D DJ J C cluster","type":"exact"},{"name":"D-(DJ)-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000506"}


id: PBO:0049509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 16","termid":"PBO:0049509"}


id: PBO:0079662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 10","termid":"PBO:0079662"}


id: FYPO:0000570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mating projection assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000301"],"is_obsolete":false,"name":"decreased shmoo formation","synonyms":[{"name":"decreased conjugation tube formation","type":"exact"},{"name":"decreased mating projection assembly","type":"exact"},{"name":"decreased mating projection formation","type":"exact"},{"name":"decreased shmoo assembly","type":"exact"},{"name":"reduced shmoo formation","type":"exact"},{"name":"shmoo formation: decreased","type":"related"}],"termid":"FYPO:0000570"}


id: GO:0031168
data:
  {"annotated_genes":["SJAG_00469","SJAG_04032","SJAG_04031","SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94443,94450,105716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[94398],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a ferrichrome. Ferrichromes are any of a group of growth-promoting Fe(III) chelates formed by various genera of microfungi. They are homodetic cyclic hexapeptides made up of a tripeptide of glycine (or other small neutral amino acids) and a tripeptide of an N'acyl-N4-hydroxy-L-ornithine.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ferrichrome metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ferrichrome metabolism","type":"exact"}],"termid":"GO:0031168","terms_by_termid":{"GO:0031169":null,"GO:1905569":null}}


id: GO:0033901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of poly(A), forming oligoribonucleotides and ultimately 3'-AMP.","definition_xrefs":["EC:3.1.27.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0140098","GO:0016787"],"is_obsolete":false,"name":"ribonuclease V activity","secondary_identifiers":["MetaCyc:3.1.27.8-RXN"],"synonyms":[{"name":"endoribonuclease V activity","type":"related"}],"termid":"GO:0033901"}


id: PBO:0071840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 35","termid":"PBO:0071840"}


id: PBO:0089954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0642 conserved fungal protein","termid":"PBO:0089954"}


id: PBO:0055796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a)","termid":"PBO:0055796"}


id: MONDO:0020006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hematologic disease (obsolete MONDO:0020006)","termid":"MONDO:0020006","xrefs":{"Monarch":{"xref_id":"0020006"}}}


id: PR:O59699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC36.02c gene.","definition_xrefs":["UniProtKB:O59699","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C36.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.02c","synonyms":[{"name":"Spom972h-SPBC36.02c","type":"exact"}],"termid":"PR:O59699"}


id: PBO:0058839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8069","termid":"PBO:0058839"}


id: GO:0016824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid halide bond.","definition_xrefs":["EC:3.8.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on acid halide bonds","termid":"GO:0016824"}


id: FYPO:0002506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation","termid":"FYPO:0002503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein palmitoylation during vegetative growth","synonyms":[{"name":"abnormal protein palmitoylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002506"}


id: GO:0018916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrobenzene (nitrobenzol), a derivative of benzene with an NO2 group attached to the ring. It is a yellow aromatic liquid used in perfumery and manufactured in large quantities in the preparation of aniline.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrobenzene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:nb"],"synonyms":[{"name":"nitrobenzene metabolism","type":"exact"}],"termid":"GO:0018916"}


id: MONDO:0003650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hepatoblastoma characterized by the presence of fetal and embryonal epithelial components and a mesenchymal component.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatoblastoma","termid":"MONDO:0018666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"mixed hepatoblastoma","secondary_identifiers":["DOID:5789","UMLS:C1334784","NCIT:C7097","MEDGEN:233194","ICDO:8970/3"],"synonyms":[{"name":"mixed epithelial and mesenchymal hepatoblastoma","type":"exact"}],"termid":"MONDO:0003650","xrefs":{"Monarch":{"xref_id":"0003650"}}}


id: PBO:0042975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 1 like","termid":"PBO:0042975"}


id: GO:0009091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of homoserine, alpha-amino-gamma-hydroxybutyric acid.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"},{"relation_name":"is_a","term_name":"homoserine metabolic process","termid":"GO:0009092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"homoserine catabolic process","secondary_identifiers":["MetaCyc:HOMOCYSDEGR-PWY"],"synonyms":[{"name":"homoserine breakdown","type":"exact"},{"name":"homoserine catabolism","type":"exact"},{"name":"homoserine degradation","type":"exact"}],"termid":"GO:0009091"}


id: MONDO:0014457
data:
  {"annotated_genes":["SJAG_00068"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87219],"is_not":false,"summary":null,"term":"MONDO:0014457"}]},"cv_name":"mondo","definition":"Any hyperphosphatasia-intellectual disability syndrome in which the cause of the disease is a mutation in the PIGW gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperphosphatasia-intellectual disability syndrome","termid":"MONDO:0016596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00068":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"hyperphosphatasia with intellectual disability syndrome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4014958","OMIM:616025","MEDGEN:863395","DOID:0070432","GARD:18353"],"synonyms":[{"name":"GPIBD11","type":"related"},{"name":"HPMRS5","type":"related"},{"name":"PIGW hyperphosphatasia-intellectual disability syndrome","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 11","type":"related"},{"name":"hyperphosphatasia with intellectual disability syndrome 5","type":"exact"},{"name":"hyperphosphatasia with intellectual disability syndrome type 5","type":"exact"},{"name":"hyperphosphatasia with mental retardation syndrome 5","type":"exact"},{"name":"hyperphosphatasia with mental retardation syndrome type 5","type":"exact"},{"name":"hyperphosphatasia-intellectual disability syndrome caused by mutation in PIGW","type":"exact"}],"termid":"MONDO:0014457","terms_by_termid":{"MONDO:0014457":null},"xrefs":{"Monarch":{"xref_id":"0014457"}}}


id: GO:0060568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of peptide hormone processing. Peptide hormone processing is the generation of a mature peptide hormone by posttranslational processing of a prohormone.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"regulates","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"regulation of peptide hormone processing","termid":"GO:0060568"}


id: GO:0050286
data:
  {"annotated_genes":["SJAG_04964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100588],"is_not":false,"summary":null,"term":"GO:0050286"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucitol 6-phosphate + H2O = D-glucitol + phosphate.","definition_xrefs":["RHEA:24580","EC:3.1.3.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"sorbitol-6-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02866","MetaCyc:SORBITOL-6-PHOSPHATASE-RXN"],"synonyms":[{"name":"sorbitol-6-phosphate phosphatase activity","type":"related"},{"name":"sorbitol-6-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050286","terms_by_termid":{"GO:0050286":null}}


id: FYPO:0006851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of one or more meiotic cell cycle phases is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of cell cycle phase","termid":"FYPO:0000410"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle phase","termid":"FYPO:0002738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased duration of meiotic cell cycle phase","synonyms":[{"name":"reduced duration of meiotic cell cycle phase","type":"exact"}],"termid":"FYPO:0006851"}


id: PBO:0030288
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_sulfide_level","termid":"PBO:0030288"}


id: PBO:0080801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 7","termid":"PBO:0080801"}


id: PBO:0039500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 23","termid":"PBO:0039500"}


id: PR:Q9P7I9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane emp24 domain-containing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04512","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal protein P24B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.17","secondary_identifiers":["UniProtKB:Q9P7I9"],"synonyms":[{"name":"Spom972h-TMED2","type":"exact"}],"termid":"PR:Q9P7I9"}


id: GO:0102820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: norbixin + S-adenosyl-L-methionine = bixin + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete norbixin methyltransferase activity (obsolete GO:0102820)","termid":"GO:0102820"}


id: PBO:0064677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 13","termid":"PBO:0064677"}


id: PBO:0038577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABRAXAS1 pseudogene 2","termid":"PBO:0038577"}


id: MONDO:0009462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine phosphorylase deficiency, immune defect due to","secondary_identifiers":["OMIM:243080","MEDGEN:344562","MESH:C565465","UMLS:C1855737"],"synonyms":[{"name":"inosine phosphorylase deficiency, immune defect due to","type":"exact"}],"termid":"MONDO:0009462","xrefs":{"Monarch":{"xref_id":"0009462"}}}


id: SO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The lambda bacteriophage is the vector for the linear lambda clone. The genes involved in the lysogenic pathway are removed from the from the viral DNA. Up to 25 kb of foreign DNA can then be inserted into the lambda genome.","definition_xrefs":["ISBN:0-1767-2380-8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lambda_vector","synonyms":[{"name":"lambda vector","type":"exact"}],"termid":"SO:0000754"}


id: PBO:0014283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQC complex ubiquitin-protein ligase E3 Rkr1 (predicted)","termid":"PBO:0014283"}


id: PBO:0025421
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Salla disease","termid":"PBO:0025421"}


id: FYPO:0004088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the morphology of cytoplasmic microtubules is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0002399","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cytoplasmic microtubules","synonyms":[{"name":"abnormal cytoplasmic microtubule morphology","type":"exact"},{"name":"abnormal cytoplasmic microtubule structure","type":"narrow"},{"name":"abnormal cytoplasmic microtubules during mitotic cell cycle","type":"related"},{"name":"abnormal cytoplasmic microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004088"}


id: PBO:0038583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and BTB domain containing 3","termid":"PBO:0038583"}


id: GO:0006914
data:
  {"annotated_genes":["SJAG_04991","SJAG_05184","SJAG_01283","SJAG_05289","SJAG_04552","SJAG_01722","SJAG_02441","SJAG_02640","SJAG_00724","SJAG_05000","SJAG_05346","SJAG_03170","SJAG_02539","SJAG_02100","SJAG_00115","SJAG_02432","SJAG_01561","SJAG_03851","SJAG_02723","SJAG_04496","SJAG_00114","SJAG_01251","SJAG_04232","SJAG_04963","SJAG_03467","SJAG_03136","SJAG_04502","SJAG_03718","SJAG_03100","SJAG_05245","SJAG_03371","SJAG_03435","SJAG_01073","SJAG_01876","SJAG_00732","SJAG_00355","SJAG_03345","SJAG_04759","SJAG_01367","SJAG_01382","SJAG_05261","SJAG_00850","SJAG_01274","SJAG_06309","SJAG_00704","SJAG_04219","SJAG_02414","SJAG_01415","SJAG_05017","SJAG_02765","SJAG_04860","SJAG_04249","SJAG_01716","SJAG_00004","SJAG_04294","SJAG_02315","SJAG_02852","SJAG_04655","SJAG_05210","SJAG_00974","SJAG_00820","SJAG_04837","SJAG_02525","SJAG_02699","SJAG_00824","SJAG_04435","SJAG_00763","SJAG_00284","SJAG_00079","SJAG_04021","SJAG_01311","SJAG_00053","SJAG_00169","SJAG_01509","SJAG_02433","SJAG_00029","SJAG_04023","SJAG_01467","SJAG_03799","SJAG_00380","SJAG_01184","SJAG_00645","SJAG_01783","SJAG_00059","SJAG_01135","SJAG_02655","SJAG_00457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60524,74932,79964,89954,95848,97959,107935],"is_not":false,"summary":null,"term":"GO:0006914"},{"annotations":[77317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035973"},{"annotations":[60276,71100,72508,73833,77318,71786,80094,77137,80675,93252,103901,79090,94964,72655,78674,80038,104922,80006,70906,72978,72520],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000045"},{"annotations":[70908,75851,72658],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097352"},{"annotations":[94965],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[72194,72656,73469,79091,80156,74959,73804,95776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000422"},{"annotations":[79092,73472,80158,72196,72660,73806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[93875,91343,110585,115465,88554,105287,105219,99430,77470,110134,76507,104054,89008,111827,97636,102847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016236"},{"annotations":[77418,66115,110970,60752,80007,80039,94968,77319,72920,73477,70907,73834,100303,65907,72509,80457,115527,77138,72979,93254,95308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000423"},{"annotations":[76621,72881],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010507"},{"annotations":[106967],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0016242"},{"annotations":[80152,99723,108874,72190,73800,79087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044804"},{"annotations":[77605,80157,73470,80097,72511,71790,73805,72195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000425"},{"annotations":[72653,77316,70639,72977,80456,72506,73694,77417,73467,73476,72919,74770,73832,71859,80005,80037,80093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034727"},{"annotations":[108875,108965],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000786"},{"annotations":[97948],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1901098"},{"annotations":[80290,73953,109981,99767,73933,112150,114885,99201],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010508"},{"annotations":[69289],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903599"},{"annotations":[75784,106578],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0016239"},{"annotations":[89863],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140501"},{"annotations":[72970,66397,78760,66121,79998,80030],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010506"},{"annotations":[80008,74960,80459,104694,99724,73479,80040,80099,108876,116896,77419,90754,72980,73471,78576,110971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061709"},{"annotations":[80092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034517"},{"annotations":[60753,67067,59443,65906],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061753"}]},"cv_name":"biological_process","definition":"The cellular catabolic process in which cells digest cellular materials, such as organelles and other macromolecular constituents, or non-self materials such as intracellular pathogens. Autophagy serves to provide essential nutrients under conditions of cellular stress; or can remodel intracellular structures during cell differentiation.","definition_xrefs":["PMID:11099404","ISBN:0198547684","GOC:autophagy","PMID:29455577","PMID:9412464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"process utilizing autophagic mechanism","termid":"GO:0061919"}],"gene_count":87,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00029":null,"SJAG_00053":null,"SJAG_00059":null,"SJAG_00079":null,"SJAG_00114":null,"SJAG_00115":null,"SJAG_00169":null,"SJAG_00284":null,"SJAG_00355":null,"SJAG_00380":null,"SJAG_00457":null,"SJAG_00645":null,"SJAG_00704":null,"SJAG_00724":null,"SJAG_00732":null,"SJAG_00763":null,"SJAG_00820":null,"SJAG_00824":null,"SJAG_00850":null,"SJAG_00974":null,"SJAG_01073":null,"SJAG_01135":null,"SJAG_01184":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01311":null,"SJAG_01367":null,"SJAG_01382":null,"SJAG_01415":null,"SJAG_01467":null,"SJAG_01509":null,"SJAG_01561":null,"SJAG_01716":null,"SJAG_01722":null,"SJAG_01783":null,"SJAG_01876":null,"SJAG_02100":null,"SJAG_02315":null,"SJAG_02414":null,"SJAG_02432":null,"SJAG_02433":null,"SJAG_02441":null,"SJAG_02525":null,"SJAG_02539":null,"SJAG_02640":null,"SJAG_02655":null,"SJAG_02699":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_02852":null,"SJAG_03100":null,"SJAG_03136":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03371":null,"SJAG_03435":null,"SJAG_03467":null,"SJAG_03718":null,"SJAG_03799":null,"SJAG_03851":null,"SJAG_04021":null,"SJAG_04023":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04249":null,"SJAG_04294":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04552":null,"SJAG_04655":null,"SJAG_04759":null,"SJAG_04837":null,"SJAG_04860":null,"SJAG_04963":null,"SJAG_04991":null,"SJAG_05000":null,"SJAG_05017":null,"SJAG_05184":null,"SJAG_05210":null,"SJAG_05245":null,"SJAG_05261":null,"SJAG_05289":null,"SJAG_05346":null,"SJAG_06309":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"autophagy","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Autophagy_(cellular)","GO:0016238","Reactome:R-HSA-9612973"],"termid":"GO:0006914","terms_by_termid":{"GO:0000045":null,"GO:0000422":null,"GO:0000423":null,"GO:0000425":null,"GO:0006914":null,"GO:0010506":null,"GO:0010507":null,"GO:0010508":null,"GO:0016236":null,"GO:0016239":null,"GO:0016240":null,"GO:0016242":null,"GO:0034517":null,"GO:0034727":null,"GO:0035973":null,"GO:0044804":null,"GO:0061709":null,"GO:0061723":null,"GO:0061753":null,"GO:0097352":null,"GO:0140501":null,"GO:1901098":null,"GO:1903599":null,"GO:2000786":null}}


id: PBO:0072405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 10","termid":"PBO:0072405"}


id: PBO:0082843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle protein; involved in vesicle formation and incorporation of specific secretory cargo; required for the delivery of bud-site selection protein Axl2p and Nha1p antiporter to cell surface; related to Drosophila cornichon; ERV14 has a paralog, ERV15, that arose from the whole genome duplication","termid":"PBO:0082843"}


id: RO:HOM0000024
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that results from a duplication preceding a given speciation event.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_out-paralogy_relationship_with","synonyms":[{"name":"alloparalogy","type":"exact"},{"name":"out-paralogous to","type":"exact"},{"name":"outparalogy","type":"exact"}],"termid":"RO:HOM0000024"}


id: GO:0061306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The identification and annealing of complementary base pairs in single-strand DNA that contributes to double-strand break repair.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA strand renaturation involved in double-strand break repair (obsolete GO:0061306)","termid":"GO:0061306"}


id: PBO:0079160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPAN18 antisense RNA 1","termid":"PBO:0079160"}


id: PBO:0049862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocellular carcinoma up-regulated EZH2-associated long non-coding RNA","termid":"PBO:0049862"}


id: PBO:0053012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 2","termid":"PBO:0053012"}


id: PBO:0002993
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Carboxyl Methyltransferase","termid":"PBO:0002993"}


id: GO:0032182
data:
  {"annotated_genes":["SJAG_00805","SJAG_02116","SJAG_00033","SJAG_00941","SJAG_00439","SJAG_00521","SJAG_01936","SJAG_01051","SJAG_04379","SJAG_03756","SJAG_00821","SJAG_02451","SJAG_04024","SJAG_01585","SJAG_03189","SJAG_01134","SJAG_00312","SJAG_02833","SJAG_02021","SJAG_01467","SJAG_03250","SJAG_00907","SJAG_02912"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74585],"is_not":false,"summary":null,"term":"GO:0032182"},{"annotations":[61207,66179,76091,74354,78846,58276,73433,80228,71671,61805,77654,78053,72516,79416,78804,60475,62903,67347,72647,73705,77066,68737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043130"}]},"cv_name":"molecular_function","definition":"Binding to a small conjugating protein such as ubiquitin or a ubiquitin-like protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00312":null,"SJAG_00439":null,"SJAG_00521":null,"SJAG_00805":null,"SJAG_00821":null,"SJAG_00907":null,"SJAG_00941":null,"SJAG_01051":null,"SJAG_01134":null,"SJAG_01467":null,"SJAG_01585":null,"SJAG_01936":null,"SJAG_02021":null,"SJAG_02116":null,"SJAG_02451":null,"SJAG_02833":null,"SJAG_02912":null,"SJAG_03189":null,"SJAG_03250":null,"SJAG_03756":null,"SJAG_04024":null,"SJAG_04379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"ubiquitin-like protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"small conjugating protein binding","type":"exact"}],"termid":"GO:0032182","terms_by_termid":{"GO:0032182":null,"GO:0043130":null}}


id: MONDO:0009566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Marfanoid habitus B intellectual deficit, autosomal recessive is a very rare multiple congenital anomalies syndrome described in four sibs and characterized by intellectual deficit, flat face and some skeletelal features of Marfan syndrome such as tall stature, dolichostenomelia, arm span larger than height, arachnodactyly of hands and feet, little subcutaneous fat, muscle hypotonia and intellectual deficit.","definition_xrefs":["Orphanet:2463"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marfanoid habitus-autosomal recessive intellectual disability syndrome","secondary_identifiers":["UMLS:C1855347","MESH:C565410","GARD:3388","MEDGEN:343326","OMIM:248770"],"synonyms":[{"name":"MARFANOID intellectual disability syndrome, autosomal","type":"related"},{"name":"MARFANOID mental retardation syndrome, autosomal","type":"related"},{"name":"Marfanoid intellectual disability syndrome autosomal","type":"related"},{"name":"Marfanoid mental retardation syndrome autosomal","type":"related"}],"termid":"MONDO:0009566","xrefs":{"Monarch":{"xref_id":"0009566"}}}


id: PBO:0061281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 2","termid":"PBO:0061281"}


id: PBO:0002049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Aar2 (predicted)","termid":"PBO:0002049"}


id: PBO:0087471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a two-component GTPase-activating protein, Bfa1p-Bub2p; contributes to GAP activity, inactivating Tem1 by stimulating GTP hydrolysis following damage or misalignment of the mitotic spindle; functions as a guanine-nucleotide exchange inhibitor (GDI) for Tem1p; involved in multiple cell cycle checkpoint pathways that control mitotic exit; required when telomeres are damaged, but not for all types of chromosomal DNA damage; phosphorylated by the Polo-like kinase Cdc5p","termid":"PBO:0087471"}


id: FYPO:0001878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable but is elongated and has an abnormally low thickness or diameter.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"viable thin vegetative cell","termid":"FYPO:0001877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"viable thin, elongated vegetative cell","synonyms":[{"name":"thin, elongated viable cell during vegetative growth","type":"exact"},{"name":"thin, elongated viable vegetative cell","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell diameter","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell thickness","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell width","type":"exact"},{"name":"viable thin, elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001878"}


id: MONDO:0019827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease associated with non-acquired combined pituitary hormone deficiency (obsolete MONDO:0019827)","secondary_identifiers":["Orphanet:95495"],"synonyms":[{"name":"secondary non-acquired combined pituitary hormone deficiency","type":"exact"}],"termid":"MONDO:0019827","xrefs":{"Monarch":{"xref_id":"0019827"}}}


id: PBO:0080177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 12","termid":"PBO:0080177"}


id: MONDO:0000466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an electrocardiographic finding of prolonged PR interval for a specific population. For adults one common threshold is a PR interval greater than 0.20 seconds.","definition_xrefs":["NCIT:C62015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular block","termid":"MONDO:0000465"},{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"first-degree atrioventricular block","secondary_identifiers":["MEDGEN:43215","SCTID:270492004","DOID:0050821","UMLS:C0085614","ICD9:426.11"],"synonyms":[{"name":"AV block first degree","type":"exact"},{"name":"atrioventricular block first degree","type":"exact"},{"name":"atrioventricular block, first degree","type":"exact"},{"name":"first degree AV block","type":"exact"},{"name":"first degree atrioventricular block","type":"exact"}],"termid":"MONDO:0000466","xrefs":{"Monarch":{"xref_id":"0000466"}}}


id: PBO:0059631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTCH2 pseudogene 3","termid":"PBO:0059631"}


id: PBO:0074391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 2","termid":"PBO:0074391"}


id: GO:0020027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hemoglobin, including its uptake and utilization.","definition_xrefs":["GOC:jl","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemoglobin metabolic process","synonyms":[{"name":"haemoglobin metabolic process","type":"exact"},{"name":"haemoglobin metabolism","type":"exact"},{"name":"hemoglobin metabolism","type":"exact"}],"termid":"GO:0020027"}


id: PBO:0108537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 binding protein ortholog","termid":"PBO:0108537"}


id: GO:0099012
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a neuronal dense core vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule membrane","termid":"GO:0032127"},{"relation_name":"part_of","term_name":"neuronal dense core vesicle","termid":"GO:0098992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"neuronal dense core vesicle membrane","termid":"GO:0099012"}


id: RO:HOM0000047
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves the chromosomes able to pair (synapse) during meiosis.","definition_xrefs":["ISBN:0195307615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_chromosomal_homology_relationship_with","synonyms":[{"name":"chromosomal homologous to","type":"exact"}],"termid":"RO:HOM0000047"}


id: MONDO:0023910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"RAB18 deficiency","termid":"MONDO:0700247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Martsolf syndrome","secondary_identifiers":["UMLS:C0796037","MEDGEN:208658","OMIMPS:212720"],"termid":"MONDO:0023910","xrefs":{"Monarch":{"xref_id":"0023910"}}}


id: GO:0018998
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete metaxin (obsolete GO:0018998)","synonyms":[{"name":"metaxin","type":"exact"}],"termid":"GO:0018998"}


id: PBO:0050450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein U pseudogene 1","termid":"PBO:0050450"}


id: PBO:0080091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 53","termid":"PBO:0080091"}


id: PBO:0082610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that stimulates the ATPase activity of Ssa1p; required for a late step of ribosome biogenesis; associated with the cytosolic large ribosomal subunit; contains a J-domain; mutation causes defects in fluid-phase endocytosis","termid":"PBO:0082610"}


id: GO:0021911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the synthesis and degradation of retionic acid that results in the spatial identity of regions along the anterior-posterior axis of the spinal cord.","definition_xrefs":["GOC:jid","PMID:11262869","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid metabolic process","termid":"GO:0042573"},{"relation_name":"part_of","term_name":"spinal cord anterior/posterior patterning","termid":"GO:0021512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"retinoic acid metabolic process in spinal cord anterior-posterior patterning","synonyms":[{"name":"retinoic acid metabolism in spinal cord anterior-posterior patterning","type":"exact"}],"termid":"GO:0021911"}


id: GO:0031557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process which directly activates any of the steps required for programmed cell death as a result of a chemical stimulus.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of programmed cell death in response to chemical stimulus (obsolete GO:0031557)","synonyms":[{"name":"induction of programmed cell death in response to chemical stimulus","type":"exact"},{"name":"induction of programmed cell death in response to chemical substance","type":"exact"}],"termid":"GO:0031557"}


id: PBO:0069089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 336, pseudogene","termid":"PBO:0069089"}


id: PR:Q10283
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-hydroxy-3-methylglutaryl-coenzyme A reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10572:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-coenzyme A reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.09c","secondary_identifiers":["UniProtKB:Q10283"],"synonyms":[{"name":"HMG-CoA reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC162.09c","type":"related"},{"name":"Spom972h-HMGCR","type":"exact"},{"name":"its12","type":"related"}],"termid":"PR:Q10283"}


id: MONDO:0012606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mycobacterium tuberculosis, susceptibility","termid":"MONDO:0000070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mycobacterium tuberculosis, susceptibility to, 2","secondary_identifiers":["MEDGEN:369686","UMLS:C1970235","OMIM:611046"],"synonyms":[{"name":"MTBS2","type":"related"},{"name":"Mycobacterium tuberculosis, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0012606","xrefs":{"Monarch":{"xref_id":"0012606"}}}


id: PBO:0061767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase antizyme 2","termid":"PBO:0061767"}


id: MONDO:0014713
data:
  {"annotated_genes":["SJAG_03352","SJAG_00580"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86361,86362],"is_not":false,"summary":null,"term":"MONDO:0014713"}]},"cv_name":"mondo","definition":"Any porokeratosis (disease) in which the cause of the disease is a mutation in the FDPS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disseminated superficial actinic porokeratosis","termid":"MONDO:0019212"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis 9, multiple types","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:894586","GARD:16146","UMLS:C4225262","OMIM:616631"],"synonyms":[{"name":"FDPS porokeratosis (disease)","type":"exact"},{"name":"POROK9","type":"exact"},{"name":"porokeratosis (disease) caused by mutation in FDPS","type":"exact"},{"name":"porokeratosis 9, multiple types","type":"exact"},{"name":"porokeratosis 9, multiple types; POROK9","type":"exact"}],"termid":"MONDO:0014713","terms_by_termid":{"MONDO:0014713":null},"xrefs":{"Monarch":{"xref_id":"0014713"}}}


id: PBO:0045194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 7","termid":"PBO:0045194"}


id: MONDO:0021313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"skin cancer","termid":"MONDO:0002898"},{"relation_name":"is_a","term_name":"palpebral epidermal tumor","termid":"MONDO:0020172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"eyelid cancer","secondary_identifiers":["Orphanet:98584","MEDGEN:501131","ICD9:173.1","NCIT:C6786","SCTID:231829006","SCTID:423425006","UMLS:C1828015"],"synonyms":[{"name":"cancer of eyelid","type":"exact"},{"name":"cancer of skin of eyelid","type":"exact"},{"name":"eyelid cancer","type":"exact"},{"name":"malignant eyelid neoplasm","type":"exact"},{"name":"malignant eyelid tumor","type":"exact"},{"name":"malignant eyelid tumour","type":"exact"},{"name":"malignant neoplasm of eyelid","type":"exact"},{"name":"malignant neoplasm of skin of eyelid","type":"exact"},{"name":"malignant neoplasm of the eyelid","type":"exact"},{"name":"malignant skin of eyelid neoplasm","type":"exact"},{"name":"malignant tumor of eyelid","type":"exact"},{"name":"malignant tumor of palpebral epidermis","type":"exact"},{"name":"malignant tumour of the eyelid","type":"exact"},{"name":"skin of eyelid cancer","type":"exact"}],"termid":"MONDO:0021313","xrefs":{"Monarch":{"xref_id":"0021313"}}}


id: PBO:0072491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 20","termid":"PBO:0072491"}


id: PBO:0068329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF32 divergent transcript","termid":"PBO:0068329"}


id: PBO:0001973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L24 (predicted)","termid":"PBO:0001973"}


id: PBO:0089837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L25","termid":"PBO:0089837"}


id: GO:0016729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces an acceptor other than disulfide, NAD, NADP or oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on CH2 groups, other acceptors (obsolete GO:0016729)","synonyms":[{"name":"oxidoreductase activity, acting on CH2 groups, other acceptors","type":"exact"}],"termid":"GO:0016729"}


id: GO:0060278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ovulation, the release of a mature ovum/oocyte from an ovary.","definition_xrefs":["GOC:tb","GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ovulation","termid":"GO:0030728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ovulation","termid":"GO:0060278"}


id: PBO:0061034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar pre-rRNA processing protein NIP7","termid":"PBO:0061034"}


id: MONDO:0008462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"split lower lip","secondary_identifiers":["MEDGEN:356607","UMLS:C1866743","OMIM:183400"],"synonyms":[{"name":"split Lower type lip","type":"exact"},{"name":"split lower lip","type":"exact"}],"termid":"MONDO:0008462","xrefs":{"Monarch":{"xref_id":"0008462"}}}


id: PBO:0074390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 1 (Vel blood group)","termid":"PBO:0074390"}


id: PBO:0027863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K56_acetylation","termid":"PBO:0027863"}


id: PBO:0000344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sft1 (predicted)","termid":"PBO:0000344"}


id: PBO:0116408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 4","termid":"PBO:0116408"}


id: PBO:0040078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin domain containing 5","termid":"PBO:0040078"}


id: MONDO:1011072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in Red shanked douc langur.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, Red shanked douc langur","secondary_identifiers":["OMIA:001033-54133"],"termid":"MONDO:1011072","xrefs":{"Monarch":{"xref_id":"1011072"}}}


id: MONDO:0001016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the epididymis. Representative examples include primary epididymal adenocarcinoma and metastatic carcinoma to the epididymis arising from another anatomic site.","definition_xrefs":["NCIT:C3558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epididymal neoplasm","termid":"MONDO:0003283"},{"relation_name":"is_a","term_name":"male reproductive organ cancer","termid":"MONDO:0005836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"epididymis cancer","secondary_identifiers":["SCTID:363452003","UMLS:C0153602","DOID:10366","MEDGEN:57792","ICD9:187.5"],"synonyms":[{"name":"cancer of epididymis","type":"exact"},{"name":"epididymis cancer","type":"exact"},{"name":"malignant epididymal neoplasm","type":"exact"},{"name":"malignant epididymal tumor","type":"exact"},{"name":"malignant epididymal tumour","type":"exact"},{"name":"malignant epididymis neoplasm","type":"exact"},{"name":"malignant neoplasm of epididymis","type":"exact"},{"name":"malignant neoplasm of the epididymis","type":"exact"},{"name":"malignant tumor of epididymis","type":"exact"},{"name":"malignant tumor of the epididymis","type":"exact"},{"name":"malignant tumour of epididymis","type":"exact"},{"name":"malignant tumour of the epididymis","type":"exact"}],"termid":"MONDO:0001016","xrefs":{"Monarch":{"xref_id":"0001016"}}}


id: PBO:0036534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoprotein (RNP) complex Utp502 (predicted)","termid":"PBO:0036534"}


id: PBO:0029762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vacuolated_vegetative_cell","termid":"PBO:0029762"}


id: GO:1903305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["GOC:PARL","GOC:pad","GO_REF:0000058","PMID:12526776","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocytosis","termid":"GO:0017157"},{"relation_name":"regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of regulated secretory pathway","termid":"GO:1903305"}


id: PBO:0016049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit Rpp40 (predicted)","termid":"PBO:0016049"}


id: PR:O59759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1020.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1020.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.05","synonyms":[{"name":"Spom972h-SPCC1020.05","type":"exact"}],"termid":"PR:O59759"}


id: SO:1000162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intrachromosomal transposition whereby the segment between the first two breaks listed is removed and inserted at the third break; the orientation of the insertion with respect to its flanking segments is not recorded.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrachromosomal_transposition","termid":"SO:1000041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unoriented_intrachromosomal_transposition","synonyms":[{"name":"(Drosophila)uTp","type":"related"},{"name":"unorientated intrachromosomal transposition","type":"exact"}],"termid":"SO:1000162"}


id: PBO:0078820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 2-3","termid":"PBO:0078820"}


id: PBO:0000677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Puf3 (predicted)","termid":"PBO:0000677"}


id: PBO:0083199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene MMS4","termid":"PBO:0083199"}


id: PBO:0062414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 43 pseudogene","termid":"PBO:0062414"}


id: MONDO:0016300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete transposition of the great arteries (obsolete MONDO:0016300)","termid":"MONDO:0016300","xrefs":{"Monarch":{"xref_id":"0016300"}}}


id: PBO:0030198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cytochalasin_B","termid":"PBO:0030198"}


id: MONDO:0019354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stickler syndrome is an inherited vitreoretinopathy characterized by the association of ocular signs with more or less complete forms of Pierre-Robin sequence, bone disorders, and sensorineural deafness (10% of cases).","definition_xrefs":["Orphanet:828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"vitreoretinal degeneration","termid":"MONDO:0020248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005497","MONDO:0005559"],"is_obsolete":false,"name":"Stickler syndrome","secondary_identifiers":["MedDRA:10063402","GARD:10782","ICD9:759.89","OMIMPS:108300","UMLS:C0265253","DOID:0080046","NCIT:C74984","MEDGEN:120521","NORD:1739","icd11.foundation:246271691","SCTID:78675000"],"synonyms":[{"name":"Stickler syndrome","type":"exact"},{"name":"hereditary progressive arthroophthalmopathy","type":"exact"}],"termid":"MONDO:0019354","xrefs":{"Monarch":{"xref_id":"0019354"}}}


id: MONDO:0019990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-amyloid fibrillary glomerulopathy (non-amyloid FGP) is a rare cause of glomerulonephritis (GN) characterized by glomerular accumulation of non-amyloid fibrils in the mesangium and the glomerular (and rarely tubular) basement membrane, that mainly presents with renal insufficiency, micro-hematuria and nephrotic range proteinuria. Non-amyloid FGP and immunotactoid glomerulopathy (ITG) are often grouped together as pathogenetically related diseases.","definition_xrefs":["Orphanet:97566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunotactoid or fibrillary glomerulopathy","termid":"MONDO:0019605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"non-amyloid fibrillary glomerulopathy","secondary_identifiers":["NORD:2024","SCTID:718192000","UMLS:C4273674","MEDGEN:907201","GARD:12740"],"synonyms":[{"name":"Congo red-negative amyloidosis-like glomerulopathy","type":"exact"},{"name":"Fibrillary Glomerulonephritis ","type":"exact"},{"name":"fibrillary glomerulonephritis","type":"related"},{"name":"non-amyloid fibrillary glomerulonephritis","type":"exact"}],"termid":"MONDO:0019990","xrefs":{"Monarch":{"xref_id":"0019990"}}}


id: GO:0140343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes phosphatidylserine from the outer leaflet of a donor membrane, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to the outer leaflet of an acceptor membrane.","definition_xrefs":["PMID:26206935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0120013","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phosphatidylserine transfer activity","synonyms":[{"name":"intermembrane phosphatidylserine carrier activity","type":"narrow"}],"termid":"GO:0140343"}


id: PBO:0075612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT domain containing methyltransferase 1","termid":"PBO:0075612"}


id: GO:0051198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving a coenzyme.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of coenzyme metabolic process (obsolete GO:0051198)","synonyms":[{"name":"down regulation of coenzyme metabolic process","type":"exact"},{"name":"down-regulation of coenzyme metabolic process","type":"exact"},{"name":"downregulation of coenzyme metabolic process","type":"exact"},{"name":"inhibition of coenzyme metabolic process","type":"narrow"},{"name":"negative regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"negative regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"negative regulation of coenzyme metabolism","type":"exact"}],"termid":"GO:0051198"}


id: FYECO:0000179
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cysteine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cysteine","synonyms":[{"name":"C added","type":"exact"},{"name":"Cys added","type":"exact"}],"termid":"FYECO:0000179"}


id: SO:0001407
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing the nature of a proteinaceous polymer, where by the amino acid units are joined by peptide bonds.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymer_attribute","termid":"SO:0000443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl","termid":"SO:0001407"}


id: GO:0044525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a peptidyl-cystine residue in a protein by the addition of sulfur, to form peptidyl-cysteine persulfide.","definition_xrefs":["GOC:jl","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein sulfhydration","termid":"GO:0044524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cystine sulfhydration","termid":"GO:0044525"}


id: GO:0032481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of type I interferon production","termid":"GO:0032479"},{"relation_name":"positively_regulates","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of type I interferon production","secondary_identifiers":["Reactome:R-HSA-1834949"],"synonyms":[{"name":"activation of type I interferon production","type":"narrow"},{"name":"positive regulation of type I IFN production","type":"exact"},{"name":"stimulation of type I interferon production","type":"narrow"},{"name":"up regulation of type I interferon production","type":"exact"},{"name":"up-regulation of type I interferon production","type":"exact"},{"name":"upregulation of type I interferon production","type":"exact"}],"termid":"GO:0032481"}


id: PR:O94417
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf26 gene.","definition_xrefs":["UniProtKB:O94417","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf26 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.10","synonyms":[{"name":"Spom972h-cwf26","type":"exact"},{"name":"complexed with cdc5 protein 26 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94417"}


id: PBO:0056183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAFF interacting protein (pseudogene)","termid":"PBO:0056183"}


id: PBO:0090483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Vps66","termid":"PBO:0090483"}


id: MONDO:0850130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"gastroesophageal adenocarcinoma","secondary_identifiers":["DOID:0080375"],"termid":"MONDO:0850130","xrefs":{"Monarch":{"xref_id":"0850130"}}}


id: PBO:0041281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 7","termid":"PBO:0041281"}


id: MONDO:0019415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal and neonatal alloimmune thrombocytopenia (NAIT) is a blood disorder that affects pregnant women and their babies. NAIT was first reported in the literature in 1953 and is estimated to occur in as many as 1 in 1200 live births. NAIT results in the destruction of platelets in the fetus or infant due to a mismatch between the mother's platelets and those of the baby. Certain molecules (antigens) on the surface of the baby's platelets are recognized as foreign by the mother's immune system. The mother's immune system then creates antibodies that attack and destroy the baby's platelets. Though NAIT can occur whenever the mother's blood mixes with that of the baby, it is usually triggered when the mother is exposed to the baby's blood during delivery. Many cases of NAIT are mild. Signs and symptoms may include a low platelet count (thrombocytopenia) and signs of bleeding into the skin such as petechiae and purpura. In the most severe cases, NAIT can cause bleeding episodes that may result in death or long-term disability. Bleeding episodes can occur either during pregnancy or after birth. Management of the infant with neonatal alloimmune thrombocytopenia may include platelet transfusions, ultrasounds, and intravenous immunoglobulin (IVIG). Treatment for pregnant mothers at risk for NAIT may include IVIG and steroids.","direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"fetal and neonatal alloimmune thrombocytopenia","secondary_identifiers":["GARD:2295","MEDGEN:1720701","UMLS:C3854603","SCTID:240305000","NORD:91170","Orphanet:853","ICD10CM:P61.0","NANDO:2200647"],"synonyms":[{"name":"NAIT","type":"exact"}],"termid":"MONDO:0019415","xrefs":{"Monarch":{"xref_id":"0019415"}}}


id: PBO:0036520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Ipi1","termid":"PBO:0036520"}


id: MONDO:0008598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trichodysplasia-xeroderma syndrome is an extremely rare, syndromic hair shaft anomaly characterized by sparse, coarse, brittle, excessively dry and slow-growing scalp hair, sparse axillary and pubic hair, sparse or absent eyelashes and eyebrows and dry skin. Hair shaft analysis shows pili torti, longitudinal splitting, grooves, peeling and scaling. There have been no further descriptions in the literature since 1987.","definition_xrefs":["Orphanet:3361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair anomaly","termid":"MONDO:0019278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichodysplasia-xeroderma syndrome","secondary_identifiers":["OMIM:190360","MEDGEN:349898","GARD:5261","UMLS:C1860822","MESH:C566032"],"synonyms":[{"name":"trichodysplasia xeroderma","type":"related"},{"name":"trichodysplasia-xeroderma","type":"related"}],"termid":"MONDO:0008598","xrefs":{"Monarch":{"xref_id":"0008598"}}}


id: PBO:0068172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 479","termid":"PBO:0068172"}


id: PBO:0040984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 pseudogene 2","termid":"PBO:0040984"}


id: MONDO:0010391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"angioma serpiginosum","termid":"MONDO:0019803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioma serpiginosum, X-linked","secondary_identifiers":["GARD:10188","MESH:C536366","MEDGEN:1648301","UMLS:C4721404","OMIM:300652"],"synonyms":[{"name":"angio serpiginosum, X-linked dominant","type":"exact"},{"name":"angioma serpiginosum, X-linked","type":"exact"}],"termid":"MONDO:0010391","xrefs":{"Monarch":{"xref_id":"0010391"}}}


id: PBO:0065119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C substrate 80K-H","termid":"PBO:0065119"}


id: PBO:0059046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylmalonyl-CoA mutase","termid":"PBO:0059046"}


id: MONDO:1010266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal hypoplasia, bilateral that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal hypoplasia, non-human animal","termid":"MONDO:1010264"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal hypoplasia, bilateral, non-human animal","secondary_identifiers":["OMIA:000858"],"termid":"MONDO:1010266","xrefs":{"Monarch":{"xref_id":"1010266"}}}


id: PBO:0002579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn10","termid":"PBO:0002579"}


id: MONDO:0007189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete B-cell growth factor (obsolete MONDO:0007189)","secondary_identifiers":["OMIM:109540"],"synonyms":[{"name":"B-cell growth Factor 1","type":"related"},{"name":"B-cell growth factor","type":"exact"},{"name":"BCGF","type":"related"}],"termid":"MONDO:0007189","xrefs":{"Monarch":{"xref_id":"0007189"}}}


id: GO:0018627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-aminobenzenesulfonate + 2 H+ + NADH + O2 = 2,3-dihydroxybenzenesulfonate + NAD+ + NH4. 2,3-dihydroxybenzenesulfonate is also known as 3-sulfocatechol.","definition_xrefs":["RHEA:23468","EC:1.14.12.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-aminobenzenesulfonate 2,3-dioxygenase activity","secondary_identifiers":["GO:0018605","KEGG_REACTION:R05156","MetaCyc:2ASDOSALCAL-RXN","UM-BBD_reactionID:r0218"],"synonyms":[{"name":"2-aminobenzenesulfonate dioxygenase activity","type":"exact"},{"name":"2-aminobenzenesulfonate,NADH:oxygen oxidoreductase (2,3-hydroxylating, ammonia-forming)","type":"related"},{"name":"2-aminobenzenesulphonate 2,3-dioxygenase activity","type":"exact"},{"name":"2-aminobenzenesulphonate dioxygenase activity","type":"exact"},{"name":"2-aminosulfobenzene 2,3-dioxygenase activity","type":"related"}],"termid":"GO:0018627"}


id: PATO:0000613
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's lacking orientation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disoriented","termid":"PATO:0000613"}


id: PBO:0031289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_sister_chromatid_segregation","termid":"PBO:0031289"}


id: PBO:0042889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 418","termid":"PBO:0042889"}


id: FYPO:0009054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a higher than normal proportion of cells in the population remains viable after entering stationary phase, when subjected to glucose starvation.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased viability in stationary phase","termid":"FYPO:0001309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"increased viabilitiy in stationary phase upon glucose starvation","termid":"FYPO:0009054"}


id: PR:Q12701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A STE20/SPS1-related proline-alanine-rich protein kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04944","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ksg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.15c","secondary_identifiers":["UniProtKB:Q12701"],"synonyms":[{"name":"Spom972h-STK39","type":"exact"}],"termid":"PR:Q12701"}


id: PBO:0029161
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_resistance_to_chemical","termid":"PBO:0029161"}


id: PR:Q10232
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl901 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L9-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.16c","synonyms":[{"name":"Spom972h-rpl901","type":"exact"}],"termid":"PR:Q10232"}


id: MONDO:0014326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nemaline myopathy in which the cause of the disease is a mutation in the KLHL41 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe congenital nemaline myopathy","termid":"MONDO:0015735"},{"relation_name":"is_a","term_name":"intermediate nemaline myopathy","termid":"MONDO:0015736"},{"relation_name":"is_a","term_name":"typical nemaline myopathy","termid":"MONDO:0015737"},{"relation_name":"is_a","term_name":"childhood-onset nemaline myopathy","termid":"MONDO:0015738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"nemaline myopathy 9","secondary_identifiers":["DOID:0110929","GARD:16007","OMIM:615731","UMLS:C3810384","MEDGEN:816714"],"synonyms":[{"name":"KLHL41 nemaline myopathy","type":"exact"},{"name":"NEM9","type":"exact"},{"name":"nemaline myopathy 9","type":"exact"},{"name":"nemaline myopathy caused by mutation in KLHL41","type":"exact"},{"name":"nemaline myopathy type 9","type":"exact"}],"termid":"MONDO:0014326","xrefs":{"Monarch":{"xref_id":"0014326"}}}


id: PBO:0043838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 1C","termid":"PBO:0043838"}


id: PBO:0072242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 17","termid":"PBO:0072242"}


id: PBO:0050004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIVEP zinc finger 2","termid":"PBO:0050004"}


id: GO:0060780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the intercalary leaflet attains its shape. An intercalary leaflet is a leaflet that develops between primary leaflets.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaflet morphogenesis","termid":"GO:0060794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intercalary leaflet morphogenesis","termid":"GO:0060780"}


id: PBO:0061184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 14-1","termid":"PBO:0061184"}


id: MONDO:0015683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary malignant peritoneal tumor (obsolete MONDO:0015683)","secondary_identifiers":["Orphanet:168807"],"termid":"MONDO:0015683","xrefs":{"Monarch":{"xref_id":"0015683"}}}


id: GO:0042967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of acyl-carrier protein.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acyl-carrier-protein biosynthetic process (obsolete GO:0042967)","synonyms":[{"name":"ACP biosynthesis","type":"exact"},{"name":"ACP biosynthetic process","type":"exact"},{"name":"acyl carrier protein biosynthesis","type":"exact"},{"name":"acyl carrier protein biosynthetic process","type":"exact"},{"name":"acyl-carrier protein biosynthesis","type":"exact"},{"name":"acyl-carrier-protein anabolism","type":"exact"},{"name":"acyl-carrier-protein biosynthesis","type":"exact"},{"name":"acyl-carrier-protein formation","type":"exact"},{"name":"acyl-carrier-protein synthesis","type":"exact"}],"termid":"GO:0042967"}


id: MONDO:0009928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary alveolar microlithiasis is a disorder in which tiny fragments (microliths) of calcium phosphate gradually accumulate in the small air sacs (alveoli) of the lungs. These deposits eventually cause widespread damage to the alveoli and surrounding lung tissue (interstitial lung disease). People with this disorder may also develop a persistent cough and difficulty breathing (dyspnea), especially during physical exertion. Chest pain that worsens when coughing, sneezing, or taking deep breaths is another common feature. People with pulmonary alveolar microlithiasismay also develop calcium phosphate deposits in other organs and tissue of the body. Though the course of the disease can be variable,many casesslowly progress to lung fibrosis, respiratory failure, or cor pulmonale. The only effective therapy is lung transplantation. In some cases, pulmonary alveolar microlithiasis is caused by mutations in the SLC34A2 gene and inherited in an autosomal recessive manner.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary alveolar microlithiasis","secondary_identifiers":["SCTID:87153008","UMLS:C0155912","GARD:11894","ICD9:516.2","MESH:C562405","OMIM:265100","NANDO:2200202","icd11.foundation:1220010076","DOID:12117","Orphanet:60025","MedDRA:10037315","ICD10CM:J84.02","MEDGEN:56374"],"synonyms":[{"name":"pulmonary alveolar microlithiasis","type":"exact"}],"termid":"MONDO:0009928","xrefs":{"Monarch":{"xref_id":"0009928"}}}


id: MONDO:0013501
data:
  {"annotated_genes":["SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87095],"is_not":false,"summary":null,"term":"MONDO:0013501"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the VCP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"frontotemporal dementia with motor neuron disease","termid":"MONDO:0017161"},{"relation_name":"is_a","term_name":"frontotemporal dementia and/or amyotrophic lateral sclerosis","termid":"MONDO:0030923"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436279","GARD:15733","DOID:0060205","MEDGEN:1759760","OMIM:613954"],"synonyms":[{"name":"VCP amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in VCP","type":"exact"},{"name":"amyotrophic lateral sclerosis, with or without frontotemporal dementia","type":"exact"}],"termid":"MONDO:0013501","terms_by_termid":{"MONDO:0013501":null},"xrefs":{"Monarch":{"xref_id":"0013501"}}}


id: PBO:0049126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor class C group 5 member C","termid":"PBO:0049126"}


id: PBO:0043825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthase 1","termid":"PBO:0043825"}


id: MONDO:0000295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Acanthocephala.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acanthocephaliasis","secondary_identifiers":["DOID:0050254","SCTID:105713003","icd11.foundation:1026340475","MEDGEN:548052","UMLS:C0277331"],"synonyms":[{"name":"Acanthocephala caused disease or disorder","type":"exact"},{"name":"Acanthocephala disease or disorder","type":"exact"},{"name":"Acanthocephala infectious disease","type":"exact"},{"name":"disease caused by Acanthocephala","type":"exact"},{"name":"disease due to Acanthocephala","type":"exact"},{"name":"infection by Acanthocephala","type":"exact"},{"name":"infection by thorny-headed worm","type":"exact"}],"termid":"MONDO:0000295","xrefs":{"Monarch":{"xref_id":"0000295"}}}


id: MONDO:1010565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"diabetes insipidus, non-human animal","termid":"MONDO:1010051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes insipidus, chicken","secondary_identifiers":["OMIA:000278-9031"],"termid":"MONDO:1010565","xrefs":{"Monarch":{"xref_id":"1010565"}}}


id: PBO:0071008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 10","termid":"PBO:0071008"}


id: GO:0050296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + stipitatonate = CO2 + H+ + stipitatate.","definition_xrefs":["EC:4.1.1.60","RHEA:13885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"stipitatonate decarboxylase activity","secondary_identifiers":["MetaCyc:STIPITATONATE-DECARBOXYLASE-RXN","KEGG_REACTION:R03739"],"synonyms":[{"name":"stipitatonate carboxy-lyase (decyclizing)","type":"related"},{"name":"stipitatonate carboxy-lyase (decyclizing, stipitatate-forming)","type":"related"}],"termid":"GO:0050296"}


id: MONDO:1012245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod-cone degeneration, non-human animal","termid":"MONDO:1011981"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone degeneration, domestic cat","secondary_identifiers":["OMIA:000880-9685"],"termid":"MONDO:1012245","xrefs":{"Monarch":{"xref_id":"1012245"}}}


id: PBO:0026933
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleus_during_mitotic_interphase","termid":"PBO:0026933"}


id: MOD:00208
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and 5'-phosphoadenosine through a phosphodiester bond to form O4'-(phospho-5'-adenosine)-L-tyrosine.","definition_xrefs":["DeltaMass:0","RESID:AA0203","PubMed:5543675","Unimod:405#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"adenylated residue","termid":"MOD:01165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-adenosine)-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-[4-(5'-adenosine phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"5'-adenylic-O-tyrosine","type":"exact"},{"name":"AMP binding site","type":"related"},{"name":"MOD_RES O-AMP-tyrosine","type":"exact"},{"name":"O-5'-Adenosylation ( of Tyrosine)","type":"exact"},{"name":"O4'-(phospho-5'-adenosine)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-adenosine phosphodiester","type":"exact"},{"name":"OAMPTyr","type":"exact"},{"name":"Phosphoadenosine","type":"related"},{"name":"hydrogen 5'-adenylate tyrosine ester","type":"exact"}],"termid":"MOD:00208"}


id: GO:0097064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a non-coding RNA transcript (ncRNA) from the nucleus to the cytoplasm.","definition_xrefs":["GOC:dgf","PMID:11352936"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA export from nucleus (obsolete GO:0097064)","termid":"GO:0097064"}


id: GO:0004206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-10 activity (obsolete GO:0004206)","synonyms":[{"name":"caspase-10 activity","type":"exact"}],"termid":"GO:0004206"}


id: GO:1901258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage colony-stimulating factor production.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor production","termid":"GO:1901256"},{"relation_name":"positively_regulates","term_name":"macrophage colony-stimulating factor production","termid":"GO:0036301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of macrophage colony-stimulating factor production","synonyms":[{"name":"activation of M-CSF production","type":"exact"},{"name":"activation of macrophage colony-stimulating factor production","type":"narrow"},{"name":"positive regulation of M-CSF production","type":"exact"},{"name":"up regulation of M-CSF production","type":"exact"},{"name":"up regulation of macrophage colony-stimulating factor production","type":"exact"},{"name":"up-regulation of M-CSF production","type":"exact"},{"name":"up-regulation of macrophage colony-stimulating factor production","type":"exact"},{"name":"upregulation of M-CSF production","type":"exact"},{"name":"upregulation of macrophage colony-stimulating factor production","type":"exact"}],"termid":"GO:1901258"}


id: GO:0006941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within striated muscle tissue, resulting in the shortening of the muscle. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope.","definition_xrefs":["ISBN:0198506732","GOC:jl","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle contraction","termid":"GO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle contraction","synonyms":[{"name":"sarcomeric muscle contraction","type":"exact"}],"termid":"GO:0006941"}


id: GO:1904633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glomerular visceral epithelial cell apoptotic process.","definition_xrefs":["PMID:23692924","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"podocyte apoptotic process","termid":"GO:1903210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of podocyte apoptotic process","synonyms":[{"name":"regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"regulation of podocyte apoptosis","type":"narrow"}],"termid":"GO:1904633"}


id: PBO:0073525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing 19","termid":"PBO:0073525"}


id: PBO:0058157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4452","termid":"PBO:0058157"}


id: PBO:0045580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 2","termid":"PBO:0045580"}


id: MOD:02019
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-timnodonoyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-timnodonoylated residue","termid":"MOD:02020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155","MOD:01875"],"is_obsolete":false,"name":"N6-timnodonoyl-L-lysine","termid":"MOD:02019"}


id: SO:0000196
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the five_prime_coding_exon that codes for protein.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_region_of_exon","termid":"SO:0001215"},{"relation_name":"part_of","term_name":"five_prime_coding_exon","termid":"SO:0000200"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_coding_exon_coding_region","synonyms":[{"name":"five prime exon coding region","type":"exact"}],"termid":"SO:0000196"}


id: MONDO:0035173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, intellectual disability malformation syndrome characterized by global developmental delay, intellectual disability, delayed speech and language development, epilepsy, autistic behavior, and moderate facial dysmorphism (including elongated face, narrow forehead, arched eyebrows, horizontal palpebral fissures, hypertelorism, epicanthus, midface flattening, short nose, long and featureless philtrum, thin upper lip, macrostomia, and prominent chin). Additional variable manifestations include microcephaly, hypotonia, hypertrichosis, and strabismus.","definition_xrefs":["Orphanet:531151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 9","termid":"MONDO:0016874"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9q21.13 microdeletion syndrome","secondary_identifiers":["ICD10CM:F78.1","GARD:22212","MEDGEN:1803709","UMLS:C5681312"],"termid":"MONDO:0035173","xrefs":{"Monarch":{"xref_id":"0035173"}}}


id: PBO:0016967
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin Related Protein","termid":"PBO:0016967"}


id: PBO:0083470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PRR1","termid":"PBO:0083470"}


id: PBO:0047253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 240 member A","termid":"PBO:0047253"}


id: GO:0072493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the host cell endosome.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host cell endosome","termid":"GO:0044174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endosome lumen","synonyms":[{"name":"host endosome lumen","type":"exact"}],"termid":"GO:0072493"}


id: PBO:0042206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin I","termid":"PBO:0042206"}


id: PBO:0071573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 2","termid":"PBO:0071573"}


id: GO:0047732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-3,6-dideoxy-D-glucose = CDP-3,6-dideoxy-D-mannose.","definition_xrefs":["EC:5.1.3.10","RHEA:21656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"CDP-abequose epimerase activity","secondary_identifiers":["KEGG_REACTION:R04266","MetaCyc:RXN-9160"],"synonyms":[{"name":"CDP-3,6-dideoxy-D-glucose 2-epimerase activity","type":"related"},{"name":"CDP-D-abequose 2-epimerase activity","type":"related"},{"name":"CDP-paratose 2-epimerase activity","type":"related"},{"name":"CDP-paratose epimerase activity","type":"related"},{"name":"CDP-tyvelose 2-epimerase activity","type":"related"},{"name":"cytidine diphosphate paratose-2-epimerase activity","type":"related"},{"name":"cytidine diphosphoabequose epimerase activity","type":"related"},{"name":"cytidine diphosphodideoxyglucose epimerase activity","type":"related"},{"name":"cytidine diphosphoparatose epimerase activity","type":"related"}],"termid":"GO:0047732"}


id: PR:Q8TFH4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB17E12.10c gene.","definition_xrefs":["UniProtKB:Q8TFH4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA methyltransferase PB17E12.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.10c","synonyms":[{"name":"Spom972h-SPAPB17E12.10c","type":"exact"},{"name":"rRNA (uridine-2'-O-)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8TFH4"}


id: PBO:0051051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2-8","termid":"PBO:0051051"}


id: MONDO:0957783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis with erythrokeratoderma","secondary_identifiers":["UMLS:C5882691","OMIM:620507","MEDGEN:1852819"],"termid":"MONDO:0957783","xrefs":{"Monarch":{"xref_id":"0957783"}}}


id: GO:0010573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of vascular endothelial growth factor production due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"vascular endothelial growth factor production","synonyms":[{"name":"VEGF production","type":"exact"}],"termid":"GO:0010573"}


id: PBO:0034402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_downstream_target_(obsolete_has_downstream_target)","termid":"PBO:0034402"}


id: PBO:0080397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26C pseudogene 1","termid":"PBO:0080397"}


id: GO:0070306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lens fiber cell, any of the elongated, tightly packed cells that make up the bulk of the mature lens in the camera-type eye. The cytoplasm of a lens fiber cell is devoid of most intracellular organelles including the cell nucleus, and contains primarily crystallins, a group of water-soluble proteins expressed in vary large quantities.","definition_xrefs":["PMID:7693735","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"lens development in camera-type eye","termid":"GO:0002088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell differentiation","synonyms":[{"name":"lens fibre cell differentiation","type":"exact"}],"termid":"GO:0070306"}


id: PBO:0041307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 27A","termid":"PBO:0041307"}


id: PBO:0005040
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked myopathy with excessive autophagy","termid":"PBO:0005040"}


id: GO:0042412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats.","definition_xrefs":["ISBN:0198600461","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taurine metabolic process","termid":"GO:0019530"},{"relation_name":"is_a","term_name":"alkanesulfonate biosynthetic process","termid":"GO:0046305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"taurine biosynthetic process","synonyms":[{"name":"taurine anabolism","type":"exact"},{"name":"taurine biosynthesis","type":"exact"},{"name":"taurine formation","type":"exact"},{"name":"taurine synthesis","type":"exact"}],"termid":"GO:0042412"}


id: PBO:0031165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamine_import","termid":"PBO:0031165"}


id: GO:1903258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which sorbose is transported from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","PMID:2878925","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose import across plasma membrane","termid":"GO:0140271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"sorbose import across plasma membrane","synonyms":[{"name":"sorbose import into cell","type":"exact"}],"termid":"GO:1903258"}


id: PBO:0005634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component I (predicted)","termid":"PBO:0005634"}


id: PR:O74835
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RRP5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23270:SF0","OMA:SCHPO04382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA biogenesis protein rrp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.07","secondary_identifiers":["UniProtKB:O74835"],"synonyms":[{"name":"Spom972h-PDCD11","type":"exact"},{"name":"U3 small nucleolar RNA-associated protein rrp5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein rrp5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ribosomal RNA-processing protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74835"}


id: PBO:0003913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosidase Mag2","termid":"PBO:0003913"}


id: MONDO:1011644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent right aortic arch, non-human animal","secondary_identifiers":["OMIA:000794"],"termid":"MONDO:1011644","xrefs":{"Monarch":{"xref_id":"1011644"}}}


id: MONDO:0000153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital cardiac defect in which two heart vessels are reversed (transposed).","definition_xrefs":["NCIT:C84742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposition of the great arteries","secondary_identifiers":["Orphanet:216675","UMLS:C0040761","GARD:7795","NANDO:2200258","MESH:D014188","icd11.foundation:429190257","MEDGEN:21245"],"synonyms":[{"name":"TGA","type":"exact"},{"name":"TGV","type":"exact"},{"name":"complete transposition","type":"exact"},{"name":"great vessels transposition","type":"exact"},{"name":"transposition of great vessels","type":"exact"},{"name":"transposition of the great vessels","type":"exact"}],"termid":"MONDO:0000153","xrefs":{"Monarch":{"xref_id":"0000153"}}}


id: MONDO:0032627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 23","secondary_identifiers":["OMIM:618244","DOID:0112087","UMLS:C4748799","GARD:18374","MEDGEN:1648408"],"synonyms":[{"name":"MC1DN23","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 23","type":"related"}],"termid":"MONDO:0032627","xrefs":{"Monarch":{"xref_id":"0032627"}}}


id: PBO:0066991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 294","termid":"PBO:0066991"}


id: PBO:0039896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho/Rac guanine nucleotide exchange factor 2","termid":"PBO:0039896"}


id: FYPO:0006747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal intracellular mitochondrion distribution phenotype observed in the vegetative growth phase of the life cycle in which mitochondria cluster together more than normal, distal to the side of the nucleus near the old cell end.","definition_xrefs":["PomBase:mah","PMID:8876193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric mitochondrial aggregation","termid":"FYPO:0003811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"asymmetric mitochondrial aggregation at old end","synonyms":[{"name":"asymmetric mitochondrial aggregation at old cell end","type":"exact"},{"name":"asymmetric mitochondrial aggregation at old cell tip","type":"exact"},{"name":"asymmetric mitochondrial aggregation at old end during mitotic cell cycle","type":"related"},{"name":"asymmetric mitochondrial aggregation at old end during vegetative growth","type":"exact"},{"name":"mitochondria localized to one cell end","type":"related"},{"name":"monopolar intracellular mitochondrion distribution","type":"related"},{"name":"monopolar intracellular mitochondrion localisation","type":"related"},{"name":"monopolar intracellular mitochondrion localization","type":"related"},{"name":"monopolar mitochondrial aggregation","type":"related"},{"name":"monopolar mitochondrion distribution","type":"related"}],"termid":"FYPO:0006747"}


id: PBO:0003897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3210 family protein","termid":"PBO:0003897"}


id: GO:0007021
data:
  {"annotated_genes":["SJAG_01545","SJAG_04074","SJAG_02270","SJAG_01526","SJAG_02040","SJAG_00983","SJAG_02672","SJAG_00505","SJAG_03463"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65498,67410,71120,88930,93609,93836,96886,97088,106564],"is_not":false,"summary":null,"term":"GO:0007021"}]},"cv_name":"biological_process","definition":"The aggregation and bonding together of alpha- and beta-tubulin to form a tubulin heterodimer.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00505":null,"SJAG_00983":null,"SJAG_01526":null,"SJAG_01545":null,"SJAG_02040":null,"SJAG_02270":null,"SJAG_02672":null,"SJAG_03463":null,"SJAG_04074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"tubulin complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"tubulin assembly","type":"exact"},{"name":"tubulin folding","type":"related"},{"name":"tubulin-specific chaperone activity","type":"related"}],"termid":"GO:0007021","terms_by_termid":{"GO:0007021":null}}


id: FYPO:0006949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of S-methyl-L-ergothioneine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular S-methyl-L-ergothioneine level during vegetative growth","synonyms":[{"name":"increased S-methyl-L-ergothioneine accumulation during vegetative growth","type":"related"},{"name":"increased cellular S-methyl-L-ergothioneine level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006949"}


id: PBO:0047217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 224 member A","termid":"PBO:0047217"}


id: GO:0005808
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi-plasma membrane transport vesicle (obsolete GO:0005808)","synonyms":[{"name":"Golgi-plasma membrane transport vesicle","type":"exact"}],"termid":"GO:0005808"}


id: GO:0072482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic cell cycle spindle orientation checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic spindle checkpoint signaling","termid":"GO:0072476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic cell cycle spindle orientation checkpoint signaling","synonyms":[{"name":"mitotic cell cycle spindle orientation checkpoint effector process","type":"exact"},{"name":"response to signal involved in mitotic cell cycle spindle orientation checkpoint","type":"exact"}],"termid":"GO:0072482"}


id: GO:0102664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: indole-3-acetate + L-leucine + ATP = H+ + indole-3-acetyl-leucine + diphosphoric acid + AMP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-leucine synthetase activity (obsolete GO:0102664)","termid":"GO:0102664"}


id: PBO:0047727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FN1 divergent transcript","termid":"PBO:0047727"}


id: MONDO:0017790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare hereditary gastric cancer characterized by proximal gastric polyposis and increased risk of early-onset, intestinal-type adenocarcinoma of the gastric body, with no duodenal or colorectal polyposis. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["Orphanet:314022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyposis","termid":"MONDO:0000147"},{"relation_name":"is_a","term_name":"hereditary gastric cancer","termid":"MONDO:0018502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastric adenocarcinoma and proximal polyposis of the stomach","secondary_identifiers":["MEDGEN:1657285","GARD:17416","UMLS:C4749917","NCIT:C172989","OMIM:619182"],"synonyms":[{"name":"GAPPS","type":"exact"},{"name":"familial fundic gland polyposis with gastric cancer","type":"exact"},{"name":"fundic gland polyposis","type":"exact"},{"name":"polyposis, gastric","type":"exact"},{"name":"polyposis, gastric, Dos Santos and de Magalhaes 1980","type":"exact"}],"termid":"MONDO:0017790","xrefs":{"Monarch":{"xref_id":"0017790"}}}


id: GO:0051324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which is the first stage of M phase of meiosis and mitosis and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"M phase","termid":"GO:0000279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prophase","secondary_identifiers":["Wikipedia:Prophase"],"termid":"GO:0051324"}


id: PBO:0003845
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BeLT","termid":"PBO:0003845"}


id: PBO:0077458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 184A","termid":"PBO:0077458"}


id: PBO:0081947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 2 pseudogene 1","termid":"PBO:0081947"}


id: PBO:0085601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cell separation during budding; one of two S. cerevisiae homologs (Sds23p and Sds24p) of the S. pombe Sds23 protein, which is implicated in APC/cyclosome regulation; SDS23 has a paralog, SDS24, that arose from the whole genome duplication","termid":"PBO:0085601"}


id: MONDO:0009675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2A (LGMD2A) is a subtype of autosomal recessive limb girdle muscular dystrophy characterized by a variable age of onset of progressive, typically symmetrical and selective weakness and atrophy of proximal shoulder- and pelvic-girdle muscles (gluteus maximus, thigh adductors, and muscles of the posterior compartment of the limbs are most commonly affected) without cardiac or facial involvement. Clinical manifestations include exercise intolerance, a waddling gait, scapular winging and calf pseudo-hypertrophy.","definition_xrefs":["Orphanet:267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2A","secondary_identifiers":["DOID:0110275","UMLS:C1869123","MEDGEN:358391","SCTID:715341003","MESH:C535895","OMIM:253600","GARD:1057","NCIT:C142079"],"synonyms":[{"name":"CAPN3 autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"LGMD2","type":"related"},{"name":"LGMD2A","type":"exact"},{"name":"Leyden-Moebius muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in CAPN3","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy type 2A","type":"exact"},{"name":"calpainopathy","type":"exact"},{"name":"limb-girdle muscular dystrophy due to calpain deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2","type":"related"},{"name":"limb-girdle muscular dystrophy type 2A","type":"exact"},{"name":"muscular dystrophy limb girdle type 2A, erb type","type":"related"},{"name":"muscular dystrophy, Pelvofemoral","type":"related"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 1","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2","type":"related"},{"name":"muscular dystrophy, limb-girdle, type 2A","type":"exact"},{"name":"myositis, eosinophilic","type":"related"},{"name":"pelvofemoral muscular dystrophy","type":"exact"},{"name":"primary calpainopathy","type":"exact"}],"termid":"MONDO:0009675","xrefs":{"Monarch":{"xref_id":"0009675"}}}


id: GO:0090490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalyzes the reaction: L-Tryptophan + Oxygen + NADPH + H+ = N-Hydroxy-L-tryptophan + NADP+ + H2O.","definition_xrefs":["KEGG_REACTION:R09583"],"gene_count":0,"genotype_count":0,"name":"obsolete L-tryptophan,NADPH:oxygen oxidoreductase (N-hydroxylating) (obsolete GO:0090490)","termid":"GO:0090490"}


id: PBO:0067444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 566, pseudogene","termid":"PBO:0067444"}


id: FYPO:0001806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which guanine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal guanine import","synonyms":[{"name":"normal guanine import across plasma membrane","type":"exact"},{"name":"normal guanine import during mitotic cell cycle","type":"related"},{"name":"normal guanine import during vegetative growth","type":"exact"},{"name":"normal guanine import into cell","type":"exact"},{"name":"normal guanine uptake","type":"exact"}],"termid":"FYPO:0001806"}


id: PR:P87118
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inorganic pyrophosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00572","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase C3A12.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.02","secondary_identifiers":["UniProtKB:P87118"],"synonyms":[{"name":"PPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPA1","type":"exact"},{"name":"pyrophosphate phosphohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87118"}


id: GO:0099143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The actin cytoskeleton that is part of a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton","termid":"GO:0015629"},{"relation_name":"is_a","term_name":"presynaptic cytoskeleton","termid":"GO:0099569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"presynaptic actin cytoskeleton","termid":"GO:0099143"}


id: PR:Q9Y820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pci2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCI domain-containing protein C1105.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.07c","synonyms":[{"name":"Spom972h-pci2","type":"exact"}],"termid":"PR:Q9Y820"}


id: PATO:0001883
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's gradually becoming thicker towards the end.","definition_xrefs":["MP:0000576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clavate","secondary_identifiers":["PATO:0001797"],"synonyms":[{"name":"club-like","type":"exact"},{"name":"club-shaped","type":"exact"},{"name":"clubbed","type":"exact"}],"termid":"PATO:0001883"}


id: MONDO:0001352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the round ligament of uterus.","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system cancer","termid":"MONDO:0000637"},{"relation_name":"is_a","term_name":"uterine adnexa cancer","termid":"MONDO:0001351"},{"relation_name":"is_a","term_name":"peritoneum cancer","termid":"MONDO:0002087"},{"relation_name":"is_a","term_name":"ligament disorder","termid":"MONDO:0045044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"round ligament malignant neoplasm","secondary_identifiers":["SCTID:188204000","DOID:11748","UMLS:C0346867","MEDGEN:577692","ICD9:183.5"],"synonyms":[{"name":"cancer of round ligament of uterus","type":"exact"},{"name":"malignant neoplasm of round ligament","type":"exact"},{"name":"malignant neoplasm of round ligament of uterus","type":"exact"},{"name":"malignant round ligament of uterus neoplasm","type":"exact"},{"name":"round ligament of uterus cancer","type":"exact"}],"termid":"MONDO:0001352","xrefs":{"Monarch":{"xref_id":"0001352"}}}


id: MONDO:0000569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypersensitivity reaction type II disease that involves the endocrine system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disorder of endocrine system","secondary_identifiers":["DOID:0060005","ICD9:279.49","MEDGEN:575099","SCTID:237822008","UMLS:C0342552"],"synonyms":[{"name":"endocrine system autoimmune disease","type":"exact"},{"name":"endocrine system hypersensitivity reaction type II disease","type":"exact"}],"termid":"MONDO:0000569","xrefs":{"Monarch":{"xref_id":"0000569"}}}


id: GO:0080114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glycine hydroxymethyltransferase activity, the catalysis of the reaction 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine.","definition_xrefs":["PMID:19223513"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glycine hydroxymethyltransferase activity (obsolete GO:0080114)","termid":"GO:0080114"}


id: GO:0008683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + H+ = CO2 + succinate semialdehyde.","definition_xrefs":["RHEA:10524","EC:4.1.1.71"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-oxoglutarate decarboxylase activity","secondary_identifiers":["MetaCyc:RXN-7774","KEGG_REACTION:R00272"],"synonyms":[{"name":"2-oxoglutarate carboxy-lyase (succinate-semialdehyde-forming)","type":"related"},{"name":"2-oxoglutarate carboxy-lyase activity","type":"related"},{"name":"alpha-ketoglutarate decarboxylase activity","type":"related"},{"name":"alpha-ketoglutaric decarboxylase activity","type":"related"},{"name":"pre-2-oxoglutarate decarboxylase activity","type":"related"}],"termid":"GO:0008683"}


id: PBO:0066297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member Y, pseudogene","termid":"PBO:0066297"}


id: PBO:0076753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 3","termid":"PBO:0076753"}


id: PBO:0046642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 23","termid":"PBO:0046642"}


id: PBO:0071733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 31","termid":"PBO:0071733"}


id: MONDO:0018809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis","termid":"MONDO:0002251"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"idiopathic peliosis hepatis","secondary_identifiers":["MEDGEN:1814452","UMLS:C5680101","GARD:21977","Orphanet:480524"],"synonyms":[{"name":"idiopathic peliosis hepatitis","type":"exact"}],"termid":"MONDO:0018809","xrefs":{"Monarch":{"xref_id":"0018809"}}}


id: FYPO:0006396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which interphase microtubule organizing center (iMTOC) assembly is abnormal. iMTOC assembly is the aggregation, arrangement and bonding together of a set of components to form an interphase microtubule organizing center.","definition_xrefs":["PomBase:mah","GO:0031024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abnormal iMTOC assembly","synonyms":[{"name":"abnormal iMTOC assembly during mitotic cell cycle","type":"related"},{"name":"abnormal iMTOC assembly during vegetative growth","type":"exact"},{"name":"abnormal iMTOC formation","type":"exact"},{"name":"abnormal interphase microtubule organizing center assembly","type":"exact"},{"name":"abnormal interphase microtubule organizing center formation","type":"exact"}],"termid":"FYPO:0006396"}


id: GO:0018112
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-proline = D-proline.","definition_xrefs":["EC:5.1.1.4","RHEA:10680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"proline racemase activity","secondary_identifiers":["MetaCyc:PROLINE-RACEMASE-RXN","KEGG_REACTION:R01255"],"termid":"GO:0018112"}


id: GO:1903618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transdifferentiation.","definition_xrefs":["PMID:22118091","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"transdifferentiation","termid":"GO:0060290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transdifferentiation","termid":"GO:1903618"}


id: GO:0106124
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of a reservosome.","definition_xrefs":["PMID:15521631","PMID:22425988","GOC:ach","PMID:18452191","PMID:21818313","PMID:12204365","PMID:19288526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"reservosome","termid":"GO:0106123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"reservosome lumen","termid":"GO:0106124"}


id: PBO:0010259
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by D. melanogaster HMT1(CG4225)","termid":"PBO:0010259"}


id: PBO:0080396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26 endosomal protein sorting factor C","termid":"PBO:0080396"}


id: PATO:0001920
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the abdomen of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised ventrally","termid":"PATO:0001920"}


id: PBO:0034688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034688"}


id: MONDO:0003389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm which occurs mostly in the major salivary glands (most frequently in the parotid gland), but also in the minor salivary glands of the oral mucosa and the tracheobronchial tree. It is characterized by the presence of ductal structures which are lined by an inner layer of cuboidal epithelial-type cells and an outer layer of myoepithelial cells with clear or eosinophilic cytoplasm.","definition_xrefs":["NCIT:C4199"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"salivary gland cancer","termid":"MONDO:0004669"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"epithelial-myoepithelial carcinoma","secondary_identifiers":["DOID:5309","UMLS:C0334392","ONCOTREE:EMYOCA","MEDGEN:90776","ICDO:8562/3"],"synonyms":[{"name":"EMYOCA","type":"related"},{"name":"epithelial-myoepithelial carcinoma","type":"exact"}],"termid":"MONDO:0003389","xrefs":{"Monarch":{"xref_id":"0003389"}}}


id: MONDO:0958263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated micronodular adrenocortical disease","secondary_identifiers":["MEDGEN:1853162","Orphanet:647782","UMLS:C5816756"],"termid":"MONDO:0958263","xrefs":{"Monarch":{"xref_id":"0958263"}}}


id: GO:0052570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species produced as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete response to defense-related symbiont reactive oxygen species production (obsolete GO:0052570)","synonyms":[{"name":"response to defense-related symbiont reactive oxygen species production","type":"exact"}],"termid":"GO:0052570"}


id: PBO:0039554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD49 pseudogene 1","termid":"PBO:0039554"}


id: GO:0030592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of an ADP-ribosyl group to a residue in double-stranded DNA.","definition_xrefs":["PMID:29520010","PMID:27471034","PMID:11592983","PMID:29361132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA ADP-ribosylation","termid":"GO:0030592"}


id: PBO:0063912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha","termid":"PBO:0063912"}


id: MONDO:0017863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Digitalis (digoxin) poisoning is a potentially life-threatening poisoning that provokes conduction disturbances, characterized by increased automaticity and decreased conduction. Acute poisoning presents with the common initial manifestations of nausea and vomiting, cardiovascular manifestations (bradycardia, heart block and a variety of dysrhythmias), central nervous system manifestations (lethargy, confusion and weakness) and hyperkalemia. Chronic poisoning is more insidious, manifesting with gastrointestinal symptoms, altered mental status, and visual disturbances.","definition_xrefs":["Orphanet:31828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac glycoside intoxication","termid":"MONDO:0800388"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digitalis poisoning","secondary_identifiers":["SCTID:12876009"],"termid":"MONDO:0017863","xrefs":{"Monarch":{"xref_id":"0017863"}}}


id: MONDO:0958191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephrolithiasis, calcium oxalate","termid":"MONDO:0957318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrolithiasis, calcium oxalate, 2, with or without nephrocalcinosis","secondary_identifiers":["MEDGEN:1841152","OMIM:620374","UMLS:C5830516"],"termid":"MONDO:0958191","xrefs":{"Monarch":{"xref_id":"0958191"}}}


id: PBO:0086014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP fusion protein localizes to endoplasmic reticulum (ER) while mCherry fusion localizes to both ER and vacuole","termid":"PBO:0086014"}


id: GO:0010266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B1 stimulus.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin B1","synonyms":[{"name":"response to thiamin","type":"exact"},{"name":"response to thiamine","type":"exact"}],"termid":"GO:0010266"}


id: GO:1990934
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear compartment containing significant amounts of non-nucleolar, spliceosomal components. It is commonly found in germinal vesicle (GV) stage oocytes, and is similar to both nucleoli and sphere organelles.","definition_xrefs":["PMID:9021878","PMID:26226217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"nuclear lumen","termid":"GO:0031981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nucleolus-like body","synonyms":[{"name":"NLB","type":"exact"},{"name":"compact nucleolus","type":"exact"}],"termid":"GO:1990934"}


id: PBO:0069092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 339, pseudogene","termid":"PBO:0069092"}


id: PBO:0050451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOATZ cilia and flagella associated protein","termid":"PBO:0050451"}


id: GO:0018428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of copper into a copper-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper incorporation into metallo-sulfur cluster","termid":"GO:0018427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"copper incorporation into copper-sulfur cluster","synonyms":[{"name":"copper incorporation into copper-sulphur cluster","type":"exact"}],"termid":"GO:0018428"}


id: PBO:0087605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CoA-Synthesizing Protein Complex (CoA-SPC); subunits of this complex are: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p; involved in histone acylation; probable pantetheine-phosphate adenylyltransferase (PPAT); PPAT catalyzes the fourth step in the biosynthesis of coenzyme A from pantothenate; null mutant lethality is complemented by E. coli coaD (encoding PPAT) and by human COASY","termid":"PBO:0087605"}


id: MONDO:1011183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any vitamin D dependent rickets that occurs in dogs due to a mutation in the CYP27B1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"rickets, non-human animal","termid":"MONDO:1011456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin D dependent rickets, CYP27B1-related, dog","secondary_identifiers":["OMIA:000837-9615"],"synonyms":[{"name":"vitamin D-deficiency rickets type IA, dog","type":"related"}],"termid":"MONDO:1011183","xrefs":{"Monarch":{"xref_id":"1011183"}}}


id: PBO:0045339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 11 pseudogene 1","termid":"PBO:0045339"}


id: MONDO:0020642
data:
  {"annotated_genes":["SJAG_00394","SJAG_03280"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010916"},{"annotations":[86113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031062"}]},"cv_name":"mondo","definition":"A usually autosomal dominant and less frequently autosomal recessive genetic disorder characterized by the presence of numerous cysts in the kidneys leading to end-stage renal failure. The autosomal dominant trait is associated with abnormalities on the short arm of chromosome 16. Symptoms in patients with the autosomal dominant trait usually appear at middle age and include abdominal pain, hematuria, and high blood pressure. Patients may develop brain aneurysms and liver cysts. Patients with the autosomal recessive trait present with progressive renal failure early in life and symptoms resulting from hepatic fibrosis. The autosomal recessive trait is associated with abnormalities of chromosome 6. Polycystic kidney disease may also result as a side effect in patients on renal dialysis.","definition_xrefs":["NCIT:C75464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cystic renal disease","termid":"MONDO:0019741"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00394":null,"SJAG_03280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"polycystic kidney disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:82525005","NANDO:2200152","MESH:D007690","NANDO:1200367","OMIMPS:173900","MEDGEN:9639","EFO:0008620","GARD:7419","DOID:0080322","UMLS:C0022680"],"synonyms":[{"name":"PKD - polycystic kidney disease","type":"exact"},{"name":"fibrocystic renal disease","type":"exact"},{"name":"polycystic kidney disease","type":"exact"}],"termid":"MONDO:0020642","terms_by_termid":{"MONDO:0010916":null,"MONDO:0031062":null},"xrefs":{"Monarch":{"xref_id":"0020642"}}}


id: MONDO:0005405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Asthma that starts in childhood.","definition_xrefs":["EFO:0004591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood onset asthma","secondary_identifiers":["SCTID:233678006","UMLS:C0264408","DOID:0080815","MEDGEN:538550"],"synonyms":[{"name":"asthma of childhood","type":"exact"},{"name":"childhood asthma","type":"exact"},{"name":"paediatric asthma","type":"exact"},{"name":"pediatric asthma","type":"exact"}],"termid":"MONDO:0005405","xrefs":{"Monarch":{"xref_id":"0005405"}}}


id: MONDO:0008399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any sarcoidosis in which the cause of the disease is a mutation in the HLA-DRB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoidosis, susceptibility to, 1","secondary_identifiers":["MEDGEN:394568","UMLS:C2697310","ICD9:135","OMIM:181000"],"synonyms":[{"name":"Boeck sarcoid","type":"related"},{"name":"HLA-DRB1 sarcoidosis","type":"exact"},{"name":"SS1","type":"related"},{"name":"sarcoidosis","type":"broad"},{"name":"sarcoidosis caused by mutation in HLA-DRB1","type":"exact"},{"name":"sarcoidosis, susceptibility to, 1","type":"exact"},{"name":"sarcoidosis, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to sarcoidosis 1","type":"related"}],"termid":"MONDO:0008399","xrefs":{"Monarch":{"xref_id":"0008399"}}}


id: MOD:00231
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts six L-cysteine residues and a six-iron six-sulfur cluster to hexakis-L-cysteinyl hexairon hexasulfide.","definition_xrefs":["PubMed:1318833","RESID:AA0226","PubMed:1311311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"hexakis-L-cysteinyl hexairon hexasulfide","synonyms":[{"name":"hexa-mu3-sulfido-hexakis(S-cysteinyliron)","type":"exact"},{"name":"hexa-mu3-sulfido-hexakis(cysteinato-kappaS)-hexairon","type":"exact"},{"name":"hexakis-L-cysteinyl hexairon hexasulfide","type":"exact"},{"name":"prismane iron-sulfur cofactor","type":"exact"}],"termid":"MOD:00231"}


id: MONDO:0032823
data:
  {"annotated_genes":["SJAG_00800"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87357],"is_not":false,"summary":null,"term":"MONDO:0032823"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00800":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder 60 with seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5231497","OMIM:618587","GARD:16367","MEDGEN:1684702"],"synonyms":[{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER 60 WITH SEIZURES","type":"related"},{"name":"MRD60","type":"related"},{"name":"Mental Retardation, Autosomal Dominant 60, With Seizures","type":"related"}],"termid":"MONDO:0032823","terms_by_termid":{"MONDO:0032823":null},"xrefs":{"Monarch":{"xref_id":"0032823"}}}


id: MONDO:0007900
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86817],"is_not":false,"summary":null,"term":"MONDO:0007900"}]},"cv_name":"mondo","definition":"Any inherited isolated nail anomaly in which the cause of the disease is a mutation in the PLCD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pachyonychia congenita","termid":"MONDO:0016471"},{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080081","ICD9:703.8","MEDGEN:107463","MESH:C537289","OMIM:151600","GARD:2555","SCTID:74102009","UMLS:C0544855"],"synonyms":[{"name":"Gorlin Bushkell Jensen syndrome","type":"related"},{"name":"NDNC3","type":"related"},{"name":"PLCD1 inherited isolated nail anomaly","type":"exact"},{"name":"inherited isolated nail anomaly caused by mutation in PLCD1","type":"exact"},{"name":"leukonychia Striatus","type":"related"},{"name":"leukonychia punctata","type":"related"},{"name":"leukonychia totalis and/or partialis","type":"related"},{"name":"leukonychia totalis multiple sebaceous cysts renal calculi","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 3","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 3, (leukonychia)","type":"exact"},{"name":"nail disorder, nonsyndromic congenital, type 3","type":"exact"},{"name":"nonsyndromic congenital nail disorder type 3","type":"exact"},{"name":"porcelain nails","type":"related"}],"termid":"MONDO:0007900","terms_by_termid":{"MONDO:0007900":null},"xrefs":{"Monarch":{"xref_id":"0007900"}}}


id: MONDO:0010874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enteropathy, familial, with villous edema and immunoglobulin G2 deficiency","secondary_identifiers":["UMLS:C1838238","OMIM:600351","MESH:C563949","MEDGEN:324980"],"synonyms":[{"name":"enteropathy, familial, with villous edema and immunoglobulin G2 deficiency","type":"exact"}],"termid":"MONDO:0010874","xrefs":{"Monarch":{"xref_id":"0010874"}}}


id: GO:0033316
data:
  {"annotated_genes":["SJAG_01330","SJAG_01082","SJAG_03327","SJAG_04126","SJAG_01837","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75747,116969],"is_not":false,"summary":null,"term":"GO:0033316"},{"annotations":[114801,106634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[114091],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[101655],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a meiotic spindle assembly checkpoint, that delays the metaphase/anaphase transition of a meiotic cell cycle until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle checkpoint signaling","termid":"GO:0044779"},{"relation_name":"is_a","term_name":"spindle assembly checkpoint signaling","termid":"GO:0071173"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"meiotic spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072465"],"synonyms":[{"name":"meiotic spindle assembly checkpoint","type":"exact"},{"name":"signal transduction involved in meiotic spindle assembly checkpoint","type":"exact"}],"termid":"GO:0033316","terms_by_termid":{"GO:0033316":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:2000380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesoderm development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesoderm development","termid":"GO:2000380"}


id: PBO:0078712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-7","termid":"PBO:0078712"}


id: MONDO:0006210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A distinctive type of liver cell carcinoma that arises in non-cirrhotic livers and is seen predominantly in young patients. The tumor cells are polygonal and deeply eosinophilic, and are embedded in a fibrous stroma. The prognosis is similar to classical hepatocellular carcinoma that arises in non-cirrhotic livers, and better than hepatocellular carcinoma that arises in cirrhotic livers.","definition_xrefs":["NCIT:C4131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatocellular carcinoma","termid":"MONDO:0007256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"fibrolamellar hepatocellular carcinoma","secondary_identifiers":["ONCOTREE:FLC","DOID:5015","EFO:1000256","SCTID:253018005","ICDO:8171/3","MEDGEN:83122","GARD:21704","Orphanet:401920","MESH:C537258","UMLS:C0334287"],"synonyms":[{"name":"FHCC","type":"exact"},{"name":"FL-HCC","type":"related"},{"name":"FLC","type":"exact"},{"name":"eosinophilic glassy cell hepatoma","type":"related"},{"name":"eosinophilic hepatocellular carcinoma with lamellar fibrosis","type":"related"},{"name":"fibrolamellar cancer","type":"exact"},{"name":"fibrolamellar carcinoma","type":"exact"},{"name":"fibrolamellar carcinoma of liver cells","type":"exact"},{"name":"fibrolamellar carcinoma of the liver cells","type":"exact"},{"name":"fibrolamellar hepatocarcinoma","type":"exact"},{"name":"fibrolamellar hepatocellular carcinoma","type":"exact"},{"name":"fibrolamellar oncocytic hepatoma","type":"related"},{"name":"fibrolamellar variant of hepatocellular carcinoma","type":"related"},{"name":"hepatocellular carcinoma (fibrolamellar variant)","type":"related"},{"name":"hepatocellular carcinoma with increased stromal fibrosis","type":"related"},{"name":"hepatocellular carcinoma, fibrolamellar","type":"exact"},{"name":"hepatocellular fibrolamellar carcinoma","type":"exact"},{"name":"liver cell fibrolamellar carcinoma","type":"exact"},{"name":"oncocytic hepatocellular tumor","type":"exact"},{"name":"oncocytic hepatocellular tumour","type":"exact"},{"name":"polygonal cell hepatocellular carcinoma with fibrous stroma","type":"related"},{"name":"polygonal cell type hepatocellular carcinoma with fibrous Stroma","type":"exact"}],"termid":"MONDO:0006210","xrefs":{"Monarch":{"xref_id":"0006210"}}}


id: MONDO:0012251
data:
  {"annotated_genes":["SJAG_00379"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85544],"is_not":false,"summary":null,"term":"MONDO:0012251"}]},"cv_name":"mondo","definition":"MEDNIK syndrome, previously known as Erythrokeratodermia Variabilis type 3 (EKV3), is characterized by intellectual deficit, enteropathy, sensorineural hearing loss, peripheral neuropathy, lamellar and erythrodermic ichthyosis, and keratodermia (MEDNIK stands for Mental retardation, Enteropathy, Deafness, peripheral Neuropathy, Ichtyosis, Keratodermia).","definition_xrefs":["Orphanet:171851"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of copper metabolism","termid":"MONDO:0017762"},{"relation_name":"is_a","term_name":"erythrokeratoderma","termid":"MONDO:0019270"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"MEDNIK syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:722035007","UMLS:C1836330","MEDGEN:322893","OMIM:609313","DOID:0060483","GARD:17072","MESH:C563739"],"synonyms":[{"name":"MEDNIK","type":"related"},{"name":"erythrokeratodermia variabilis 3","type":"exact"},{"name":"erythrokeratodermia variabilis, Kamouraska type","type":"exact"},{"name":"intellectual disability, enteropathy, deafness, neuropathy, ichthyosis, keratodermia","type":"exact"},{"name":"intellectual disability, enteropathy, deafness, peripheral neuropathy, ichthyosis, and keratoderma","type":"related"},{"name":"intellectual disability-enteropathy-deafness-peripheral neuropathy-ichthyosis-keratodermia syndrome","type":"exact"},{"name":"mental retardation, enteropathy, deafness, neuropathy, ichthyosis, keratodermia","type":"exact"},{"name":"mental retardation, enteropathy, deafness, peripheral neuropathy, ichthyosis, and keratoderma","type":"related"}],"termid":"MONDO:0012251","terms_by_termid":{"MONDO:0012251":null},"xrefs":{"Monarch":{"xref_id":"0012251"}}}


id: PR:000044575
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the rad9 gene Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC664.07c","synonyms":[{"name":"SPAC664.07c","type":"related"},{"name":"Spom-rad9","type":"exact"}],"termid":"PR:000044575"}


id: PR:Q9HGL0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC800.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGL0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ubiquitin-like protein C800.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.12c","synonyms":[{"name":"Spom972h-SPBC800.12c","type":"exact"}],"termid":"PR:Q9HGL0"}


id: PBO:0052441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 1","termid":"PBO:0052441"}


id: GO:0048214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Golgi vesicle fusion to target membrane.","definition_xrefs":["GOC:jid","ISBN:0716731363","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle fusion","termid":"GO:0031338"},{"relation_name":"regulates","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of Golgi vesicle fusion to target membrane","termid":"GO:0048214"}


id: GO:0050435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving amyloid-beta, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid-beta metabolic process","synonyms":[{"name":"amyloid-beta metabolism","type":"exact"},{"name":"beta-amyloid metabolic process","type":"exact"},{"name":"beta-amyloid metabolism","type":"exact"}],"termid":"GO:0050435"}


id: PBO:0049737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit alpha pseudogene 1","termid":"PBO:0049737"}


id: PBO:0058755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6879","termid":"PBO:0058755"}


id: MONDO:0010902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondyloepiphyseal dysplasia, Reardon type is an extremely rare type of spondyloepiphyseal dysplasia described in several members of a single family to date and characterized by short stature, vertebral and femoral abnormalities, cervical instability and neurologic manifestations secondary to anomalies of the odontoid process.","definition_xrefs":["Orphanet:163662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia, Reardon type","secondary_identifiers":["MEDGEN:322238","MESH:C563472","OMIM:600561","GARD:16994","SCTID:718764004","UMLS:C1833603","icd11.foundation:1019322569"],"synonyms":[{"name":"spondyloepiphyseal dysplasia with atlantoaxial instability","type":"related"}],"termid":"MONDO:0010902","xrefs":{"Monarch":{"xref_id":"0010902"}}}


id: PBO:0080178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 13","termid":"PBO:0080178"}


id: MONDO:1011745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"comedo syndrome, non-human animal","secondary_identifiers":["OMIA:001272"],"termid":"MONDO:1011745","xrefs":{"Monarch":{"xref_id":"1011745"}}}


id: PBO:0049372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 2","termid":"PBO:0049372"}


id: FYPO:0007794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to oxidative stress is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:10428959","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to oxidative stress","synonyms":[{"name":"RNA absent from cell during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"RNA absent from cell during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"transcripts absent from cell during cellular response to oxidative stress","type":"exact"},{"name":"undetectable RNA level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007794"}


id: GO:0060843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized endothelial cell acquires specialized features of a venous endothelial cell, a thin flattened cell that lines the inside surfaces of veins.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous endothelial cell differentiation","termid":"GO:0060843"}


id: PBO:0038690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 1","termid":"PBO:0038690"}


