# terms

id: PR:O14318
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- php4 gene.","definition_xrefs":["UniProtKB:O14318","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex subunit php4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.01c","synonyms":[{"name":"Spom972h-php4","type":"exact"}],"termid":"PR:O14318"}


id: PBO:0090374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M phase inhibitor protein kinase Mik1","termid":"PBO:0090374"}


id: MONDO:0001939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the skin. It is characterized by the presence of epithelioid endothelial cells.","definition_xrefs":["NCIT:C7393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin hemangioma","termid":"MONDO:0003110"},{"relation_name":"is_a","term_name":"epithelioid hemangioma","termid":"MONDO:0021169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin epithelioid hemangioma","secondary_identifiers":["SCTID:400131007","UMLS:C0002989","DOID:14308","MEDGEN:297","MESH:D000796"],"synonyms":[{"name":"angiolymphoid cutaneous hyperplasia","type":"exact"},{"name":"angiolymphoid hyperplasia of skin","type":"exact"},{"name":"angiolymphoid hyperplasia of the skin","type":"exact"},{"name":"epithelioid hemangioma of skin","type":"exact"},{"name":"epithelioid hemangioma of the skin","type":"exact"},{"name":"histiocytoid hemangioma of skin","type":"exact"},{"name":"histiocytoid hemangioma of the skin","type":"exact"},{"name":"histiocytoid hemangioma of zone of skin","type":"exact"},{"name":"skin epithelioid hemangioma","type":"exact"},{"name":"zone of skin histiocytoid hemangioma","type":"exact"}],"termid":"MONDO:0001939","xrefs":{"Monarch":{"xref_id":"0001939"}}}


id: CHEBI:17326
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside triphosphate","termid":"CHEBI:17326"}


id: PBO:0085002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of actin nucleation-promoting factor activity; interacts with Las17p, a homolog of human Wiskott-Aldrich Syndrome protein (WASP), via an N-terminal SH3 domain, and along with PIN3 cooperatively inhibits the nucleation of actin filaments; overexpression blocks receptor-mediated endocytosis; protein increases in abundance and forms nuclear foci in response to DNA replication stress; LSB1 has a paralog, PIN3, that arose from the whole genome duplication","termid":"PBO:0085002"}


id: PBO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Valine","termid":"PBO:0000374"}


id: PBO:0058203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4496","termid":"PBO:0058203"}


id: GO:0006522
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alanine, 2-aminopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"alanine metabolic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"alanine metabolism","type":"exact"}],"termid":"GO:0006522","terms_by_termid":{"GO:0042853":null}}


id: GO:0031786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1B melatonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin receptor binding","termid":"GO:0031784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 1B melatonin receptor binding","synonyms":[{"name":"type 1B melatonin receptor ligand","type":"narrow"}],"termid":"GO:0031786"}


id: GO:0099605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the frequency of action potentials in a spike train.","definition_xrefs":["ISBN:978-0071390118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of action potential firing rate","termid":"GO:0099605"}


id: PBO:0029600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sodium:hydrogen_antiporter_activity","termid":"PBO:0029600"}


id: PBO:0064621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU6F2 antisense RNA 1","termid":"PBO:0064621"}


id: MONDO:0006902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete periventricular leukomalacia (obsolete MONDO:0006902)","termid":"MONDO:0006902","xrefs":{"Monarch":{"xref_id":"0006902"}}}


id: FYPO:0004437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of occurrence of mitotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:17515930","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic recombination","termid":"FYPO:0000503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic recombination frequency","synonyms":[{"name":"normal mitotic recombination frequency during vegetative growth","type":"exact"},{"name":"normal occurrence of mitotic recombination","type":"exact"},{"name":"normal recombination frequency during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004437"}


id: GO:0086094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An adrenergic receptor signaling pathway that contributes to an increase in frequency or rate of cardiac muscle contraction through phosphorylation and enhancement of the ryanodine receptor, a calcium-activated calcium-release channel found in the membrane of the sarcoplasmic reticulum. An adrenergic receptor-activated adenylate cyclase generates cAMP. cAMP then activates the cAMP-dependent protein kinase A (PKA), which phosphorylates the ryanodine receptor (RyR). PKA-phosphorylation of RyR enhances channel activity by sensitizing the channel to cytosolic calcium. Cytosolic calcium stimulates contractile proteins to promote muscle contraction.","definition_xrefs":["GOC:BHF","PMID:21099118","GOC:bf","GOC:mtg_cardiac_conduct_nov11"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ryanodine-sensitive calcium-release channel activity by adrenergic receptor signaling pathway involved in positive regulation of cardiac muscle contraction (obsolete GO:0086094)","synonyms":[{"name":"adrenergic receptor signaling pathway involved in positive regulation of cardiac muscle contraction via ryanodine receptor phosphorylation","type":"narrow"}],"termid":"GO:0086094"}


id: PBO:0113321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; implicated in activation of the plasma membrane H(+)-ATPase Pma1p in response to glucose metabolism and under acetic acid stress; plays a role in ion homeostasis; maintains pH homeostasis and modulates plasma membrane potential under acetic acid stress; protein abundance increases in response to DNA replication stress","termid":"PBO:0113321"}


id: GO:0009152
data:
  {"annotated_genes":["SJAG_05204","SJAG_04634","SJAG_02598","SJAG_04122","SJAG_00964","SJAG_04849","SJAG_00133","SJAG_04422","SJAG_00915","SJAG_00836","SJAG_01661","SJAG_07003","SJAG_06634","SJAG_02105","SJAG_00044","SJAG_01859","SJAG_00542","SJAG_04123","SJAG_MIT15","SJAG_00985","SJAG_01298","SJAG_02038","SJAG_01081","SJAG_04681","SJAG_MIT37","SJAG_03114","SJAG_01070","SJAG_02364","SJAG_02564","SJAG_03925","SJAG_01814","SJAG_02887","SJAG_00438","SJAG_03140","SJAG_MIT09","SJAG_02850","SJAG_03355"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77151,79181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[64558,77123,70286,58002,57099,65565,60147,72092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[72269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[57088,74295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[59501,75080,63136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[75995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[75212,64615,102554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[65070,75996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[118306],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[93627,109099,103966,103349,93196,119367,89471,95181,102133,105330,94210,103995,108118,119373,116147,108210,119361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[75997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a purine ribonucleotide, a compound consisting of ribonucleoside (a purine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic process","termid":"GO:0009260"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00964":null,"SJAG_00985":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02364":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02850":null,"SJAG_02887":null,"SJAG_03114":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04123":null,"SJAG_04422":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04849":null,"SJAG_05204":null,"SJAG_06634":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine ribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine ribonucleotide anabolism","type":"exact"},{"name":"purine ribonucleotide biosynthesis","type":"exact"},{"name":"purine ribonucleotide formation","type":"exact"},{"name":"purine ribonucleotide synthesis","type":"exact"}],"termid":"GO:0009152","terms_by_termid":{"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006189":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0042776":null,"GO:0044208":null,"GO:0044209":null,"GO:1905707":null}}


id: PBO:0060973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFYC antisense RNA 1","termid":"PBO:0060973"}


id: GO:0009013
data:
  {"annotated_genes":["SJAG_03293","SJAG_00674"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77910,76398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004777"},{"annotations":[87784,88764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036243"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate semialdehyde + NAD(P)+ + H2O = succinate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_03293":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["UM-BBD_reactionID:r0371"],"synonyms":[{"name":"succinate semialdehyde dehydrogenase (nicotinamide adenine dinucleotide (phosphate))","type":"related"},{"name":"succinate-semialdehyde:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0009013","terms_by_termid":{"GO:0004777":null,"GO:0036243":null}}


id: GO:2001110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lens epithelial cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lens epithelial cell proliferation","termid":"GO:2001109"},{"relation_name":"negatively_regulates","term_name":"lens epithelial cell proliferation","termid":"GO:0097166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lens epithelial cell proliferation","termid":"GO:2001110"}


id: GO:0060061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the specialized region on the dorsalmost side of the embryo that acts as the main signaling center establishing the vertebrate body plan.","definition_xrefs":["GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"developmental induction","termid":"GO:0031128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Spemann organizer formation","synonyms":[{"name":"Spemann's organizer formation","type":"exact"},{"name":"Spemann-Mangold organizer formation","type":"exact"}],"termid":"GO:0060061"}


id: PBO:0001775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Cic1/Utp30 family (predicted)","termid":"PBO:0001775"}


id: PBO:0066279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member C, pseudogene","termid":"PBO:0066279"}


id: PBO:0030493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-coenzyme_Q10_absent_from_cell","termid":"PBO:0030493"}


id: PBO:0041042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1/BRCA2-containing complex subunit 3","termid":"PBO:0041042"}


id: PBO:0059659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 25","termid":"PBO:0059659"}


id: MONDO:0020440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent left superior vena cava connecting to the left-sided atrium is a rare, congenital vascular malformation of the major vessels characterized by a persistent left superior vena cava which drains directly to the left atrium, without passing through the coronary sinus (that may be absent in some cases). Patients are usually asymptomatic and discovered incidentally, however hypoxia, cyanosis, murmurs, palpitations, cardiac structural anomalies (e.g. atrial septal defect, bicuspid aortic valve, cor triatrium) and risk of paradoxical embolization may be associated.","definition_xrefs":["Orphanet:99109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of superior vena cava","termid":"MONDO:0019829"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent left superior vena cava connecting to the left-sided atrium","secondary_identifiers":["UMLS:C5680293","GARD:19652","MEDGEN:1830102"],"synonyms":[{"name":"left superior caval vein persisting to the left-sided atrium","type":"exact"},{"name":"persistent left SVC connecting to the left-sided atrium","type":"exact"},{"name":"persistent left superior caval vein connecting to the left-sided atrium","type":"exact"}],"termid":"MONDO:0020440","xrefs":{"Monarch":{"xref_id":"0020440"}}}


id: GO:0140940
data:
  {"annotated_genes":["SJAG_00943","SJAG_02350"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73679,110509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990259"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a histone H2 = S-adenosyl-L-homocysteine + a methylated histone H2A. Histone methylation generally occurs on either an arginine or a lysine residue.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase activity","termid":"GO:0042054"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00943":null,"SJAG_02350":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0008276","GO:0016741","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"histone H2A methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"histone H2A methylase activity","type":"exact"},{"name":"histone H2A methylation","type":"related"}],"termid":"GO:0140940","terms_by_termid":{"GO:1990259":null}}


id: GO:0006016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-deoxyribose 1-phosphate, the phosphorylated sugar 1-phospho-2-deoxyribose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-deoxyribose 1-phosphate metabolic process","termid":"GO:0046384"},{"relation_name":"is_a","term_name":"deoxyribose phosphate biosynthetic process","termid":"GO:0046385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-deoxyribose 1-phosphate biosynthetic process","synonyms":[{"name":"2-deoxyribose 1-phosphate anabolism","type":"exact"},{"name":"2-deoxyribose 1-phosphate biosynthesis","type":"exact"},{"name":"2-deoxyribose 1-phosphate formation","type":"exact"},{"name":"2-deoxyribose 1-phosphate synthesis","type":"exact"}],"termid":"GO:0006016"}


id: MONDO:0013078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 10q23.31.","definition_xrefs":["PMID:19430480","DOID:0110761","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 24","secondary_identifiers":["MEDGEN:442792","MESH:C567818","OMIM:613006","UMLS:C2751697"],"synonyms":[{"name":"IDDM24","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 24","type":"related"},{"name":"insulin-dependent diabetes mellitus 24","type":"exact"}],"termid":"MONDO:0013078","xrefs":{"Monarch":{"xref_id":"0013078"}}}


id: GO:0070218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of sulfide ions within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfide ion homeostasis (obsolete GO:0070218)","synonyms":[{"name":"sulfide generation","type":"related"},{"name":"sulfide homeostasis","type":"exact"},{"name":"sulfide production","type":"related"},{"name":"sulphide generation","type":"related"},{"name":"sulphide homeostasis","type":"exact"},{"name":"sulphide ion homeostasis","type":"exact"},{"name":"sulphide production","type":"related"}],"termid":"GO:0070218"}


id: GO:0035842
data:
  {"annotated_genes":["SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[111069],"is_not":false,"summary":null,"term":"GO:0035842"}]},"cv_name":"cellular_component","definition":"A cell tip which has existed for at least one complete cell cycle, and at which polarized growth occurs, which is part of a cell that has activated bipolar cell growth (i.e. in which new end take-off, NETO, has taken place). For example, in fission yeast the cell end that existed prior to cell division grows immediately after division, and contains a distinctive complement of proteins including actin cytoskeletal structures.","definition_xrefs":["GOC:expert_jd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"old growing cell tip","termid":"GO:0035840"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02838":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"old cell tip after activation of bipolar cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"post-NETO old cell end","type":"exact"},{"name":"post-NETO old cell tip","type":"exact"},{"name":"post-new end take-off old cell tip","type":"exact"}],"termid":"GO:0035842","terms_by_termid":{"GO:0035842":null}}


id: MONDO:0019469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"T-cell large granular lymphocyte leukemia (T-cell LGL leukemia) is a lymphoproliferative malignancy that arises from the mature T-cell (CD3+) lineage.","definition_xrefs":["Orphanet:86872"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"B-cell chronic lymphocytic leukemia","termid":"MONDO:0004948"},{"relation_name":"is_a","term_name":"mature T-cell and NK-cell non-Hodgkin lymphoma","termid":"MONDO:0000430"},{"relation_name":"is_a","term_name":"chronic leukemia","termid":"MONDO:0001014"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"lymphoid leukemia","termid":"MONDO:0005402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"T-cell large granular lymphocyte leukemia","secondary_identifiers":["SCTID:277569004","GARD:9812","ICDO:9831/1","MEDGEN:363038","NCIT:C4664","ONCOTREE:TLGL","DOID:0050751","ICDO:9768/1","icd11.foundation:83430037","ICDO:9831/3","MedDRA:10065862","UMLS:C1955861","ICD9:204.80"],"synonyms":[{"name":"LGL leukaemia","type":"related"},{"name":"LGL leukemia","type":"related"},{"name":"LGLL","type":"exact"},{"name":"T gamma lymphoproliferative disorder","type":"exact"},{"name":"T-LGL","type":"exact"},{"name":"T-LGL leukaemia","type":"exact"},{"name":"T-LGL leukemia","type":"exact"},{"name":"T-cell LGL leukaemia","type":"exact"},{"name":"T-cell LGL leukemia","type":"exact"},{"name":"T-cell large gran. lymph. leuk.","type":"exact"},{"name":"T-cell large granular lymphocyte leukemia","type":"exact"},{"name":"T-cell large granular lymphocytic leukaemia","type":"exact"},{"name":"T-cell large granular lymphocytic leukemia","type":"exact"},{"name":"T-gamma lymphoproliferative disorder","type":"exact"},{"name":"TLGL","type":"related"},{"name":"Tgamma large granular lymphocyte leukaemia","type":"exact"},{"name":"Tgamma large granular lymphocyte leukemia","type":"exact"},{"name":"large cell granular lymphogenous leukaemia","type":"exact"},{"name":"large cell granular lymphogenous leukemia","type":"exact"},{"name":"large cell granular lymphoid leukaemia","type":"exact"},{"name":"large cell granular lymphoid leukemia","type":"exact"},{"name":"large granular lymphocyte leukaemia","type":"related"},{"name":"large granular lymphocyte leukemia","type":"related"},{"name":"large granular lymphocytic leukaemia","type":"exact"},{"name":"large granular lymphocytic leukemia","type":"exact"},{"name":"large granular lymphocytosis","type":"exact"},{"name":"leukemia, large granular LYMPHOCYTIC, malignant","type":"exact"},{"name":"proliferation of large granular lymphocytes","type":"exact"}],"termid":"MONDO:0019469","xrefs":{"Monarch":{"xref_id":"0019469"}}}


id: GO:0072629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-28B due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","GOC:BHF","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type III interferon production","termid":"GO:0034343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-28B production","secondary_identifiers":["GO:0072630"],"synonyms":[{"name":"IL-28B production","type":"exact"},{"name":"IL28B production","type":"exact"},{"name":"interferon lambda 3 production","type":"exact"},{"name":"interleukin-28B secretion","type":"narrow"}],"termid":"GO:0072629"}


id: PBO:0062869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 6A","termid":"PBO:0062869"}


id: PBO:0027932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_glucose_starvation","termid":"PBO:0027932"}


id: GO:0036523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of cytokine production by the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf","PMID:25063865","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host cytokine production (obsolete GO:0036523)","synonyms":[{"name":"'induction by symbiont of host cytokine secretion'","type":"narrow"},{"name":"induction by symbiont of host cytokine secretion","type":"related"},{"name":"positive regulation by symbiont of host cytokine secretion","type":"narrow"}],"termid":"GO:0036523"}


id: PBO:0071477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 18","termid":"PBO:0071477"}


id: GO:1901904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tyrocidine.","definition_xrefs":["PMID:9352938","GOC:TermGenie","GOC:yaf","UniPathway:UPA00180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"tyrocidine metabolic process","termid":"GO:1901902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tyrocidine biosynthetic process","synonyms":[{"name":"tyrocidine anabolism","type":"exact"},{"name":"tyrocidine biosynthesis","type":"exact"},{"name":"tyrocidine formation","type":"exact"},{"name":"tyrocidine synthesis","type":"exact"}],"termid":"GO:1901904"}


id: MONDO:0020854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Liddle syndrome in which the cause of the disease is a mutation in the SCNN1G gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Liddle syndrome","termid":"MONDO:0008323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Liddle syndrome 2","secondary_identifiers":["UMLS:C4748251","MEDGEN:1648476","OMIM:618114"],"synonyms":[{"name":"LIDLS2","type":"exact"},{"name":"Liddle syndrome 2","type":"exact"},{"name":"Liddle syndrome caused by mutation in SCNN1G","type":"exact"},{"name":"SCNN1G Liddle syndrome","type":"exact"}],"termid":"MONDO:0020854","xrefs":{"Monarch":{"xref_id":"0020854"}}}


id: GO:0071213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-aminocyclopropane-1-carboxylic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to 1-aminocyclopropane-1-carboxylic acid","termid":"GO:0009961"},{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 1-aminocyclopropane-1-carboxylic acid","termid":"GO:0071213"}


id: PBO:0056328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K9 divergent transcript","termid":"PBO:0056328"}


id: PBO:0050611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSD17B3 antisense RNA 1","termid":"PBO:0050611"}


id: PBO:0078420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 2-1","termid":"PBO:0078420"}


id: MONDO:0017115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bifid nose (obsolete MONDO:0017115)","termid":"MONDO:0017115","xrefs":{"Monarch":{"xref_id":"0017115"}}}


id: GO:0015148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-xylose from one side of a membrane to the other. D-xylose (the naturally occurring enantiomer is always D-) is a constituent of plant polysaccharides.","definition_xrefs":["ISBN:0198506732","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transporter activity","termid":"GO:0015146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"D-xylose transmembrane transporter activity","termid":"GO:0015148"}


id: MONDO:0011426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adult-onset disorder of neurodegeneration with brain iron accumulation (NBIA) characterized by anemia, retinal degeneration, diabetes and various neurological symptoms.","definition_xrefs":["Orphanet:48818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"hereditary anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"disorder of iron metabolism and transport","termid":"MONDO:0017763"},{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005328","MONDO:0005559","MONDO:0002039","MONDO:0005066","MONDO:0002280"],"is_obsolete":false,"name":"aceruloplasminemia","secondary_identifiers":["NANDO:2200582","UMLS:C0878682","NORD:707","OMIM:604290","ICD9:277.6","NANDO:1200540","SCTID:124224004","GARD:9499","MEDGEN:168057","DOID:0050711"],"synonyms":[{"name":"aceruloplasminemia","type":"exact"},{"name":"cerebellar ataxia","type":"broad"},{"name":"ceruloplasmin deficiency","type":"related"},{"name":"familial apoceruloplasmin deficiency","type":"related"},{"name":"hemosiderosis, systemic, due to aceruloplasminemia","type":"related"},{"name":"hereditary ceruloplasmin deficiency","type":"exact"},{"name":"hypoceruloplasminemia","type":"related"},{"name":"hypoceruloplasminemia, hereditary","type":"exact"},{"name":"systemic hemosiderosis due to aceruloplasminemia","type":"related"}],"termid":"MONDO:0011426","xrefs":{"Monarch":{"xref_id":"0011426"}}}


id: GO:1900442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:1900440"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900743"},{"relation_name":"positively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","synonyms":[{"name":"activation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"narrow"},{"name":"up regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"up-regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"upregulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"}],"termid":"GO:1900442"}


id: GO:0050802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The part of the circadian sleep/wake cycle where the organism is asleep.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian sleep/wake cycle process","termid":"GO:0022410"},{"relation_name":"is_a","term_name":"sleep","termid":"GO:0030431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}


id: PBO:0073783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC5A4 antisense RNA 1","termid":"PBO:0073783"}


id: FYPO:0004597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which DNA replication is initiated at one or more origins during G2 phase of the mitotic cell cycle.","definition_xrefs":["PMID:11532929","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"replication origin firing during mitotic G2 phase","synonyms":[{"name":"replication origin firing during G2 phase of mitotic cell cycle","type":"exact"},{"name":"replication origin firing during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004597"}


id: GO:0061725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipid droplets and hydrolysis of stored triglycerides occurring through the orchestrated activation of cytosolic lipases.","definition_xrefs":["GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"cytosolic lipolysis","termid":"GO:0061725"}


id: PBO:0072002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 4","termid":"PBO:0072002"}


id: MONDO:0021146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Various conditions with the symptom of headache. Headache disorders are classified into major groups, such as primary headache disorders (based on characteristics of their headache symptoms) and secondary headache disorders (based on their etiologies). (International Classification of Headache Disorders, 2nd ed. Cephalalgia 2004: suppl 1)","definition_xrefs":["MESH:D020773"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"neurological pain disorder","termid":"MONDO:0700057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"headache disorder","secondary_identifiers":["EFO:0009550","MEDGEN:140743","SCTID:230461009","UMLS:C0393735"],"synonyms":[{"name":"cephalgia syndrome","type":"related"},{"name":"cephalgia syndromes","type":"related"},{"name":"chronic daily headache","type":"related"},{"name":"chronic daily headaches","type":"related"},{"name":"chronic headache","type":"related"},{"name":"chronic headaches","type":"related"},{"name":"daily headache, chronic","type":"related"},{"name":"daily headaches, chronic","type":"related"},{"name":"headache disorder","type":"exact"},{"name":"headache syndrome","type":"related"},{"name":"headache syndromes","type":"related"},{"name":"headache, chronic","type":"related"},{"name":"headache, chronic daily","type":"related"},{"name":"headache, intractable","type":"related"},{"name":"headaches, chronic","type":"related"},{"name":"headaches, chronic daily","type":"related"},{"name":"headaches, intractable","type":"related"},{"name":"intractable headache","type":"related"},{"name":"intractable headaches","type":"related"},{"name":"syndrome, headache","type":"related"}],"termid":"MONDO:0021146","xrefs":{"Monarch":{"xref_id":"0021146"}}}


id: PBO:0055503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2937","termid":"PBO:0055503"}


id: GO:0034865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethylpentanoate + CoASH = 2,4,4-trimethylpentanoyl-CoA + OH-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethylpentanoate-CoA ligase activity (obsolete GO:0034865)","termid":"GO:0034865"}


id: GO:0051934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uptake of catecholamine neurotransmitters by neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters.","definition_xrefs":["ISBN:0123668387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine uptake","termid":"GO:0090493"},{"relation_name":"is_a","term_name":"neurotransmitter reuptake","termid":"GO:0098810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"catecholamine uptake involved in synaptic transmission","synonyms":[{"name":"catecholamine neurotransmitter import into glial cell","type":"narrow"},{"name":"catecholamine neurotransmitter import into neuron","type":"narrow"},{"name":"catecholamine neurotransmitter recycling","type":"broad"},{"name":"catecholamine neurotransmitter reuptake","type":"exact"},{"name":"catecholamine reuptake during transmission of nerve impulse","type":"related"},{"name":"catecholamine uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051934"}


id: PBO:0046865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarylacetoacetate hydrolase domain containing 2C, pseudogene","termid":"PBO:0046865"}


id: PBO:0038734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 7A","termid":"PBO:0038734"}


id: MONDO:0011744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary intraosseous venous malformation is a rare, genetic vascular anomaly characterized by severe blood vessel expansion (most frequently within the craniofacial bones) with painless bone enlargement (usually of mandibule, maxilla and/or orbital, nasal, and frontal bones), typically resulting in facial asymmetry and contour deformation. Midline abnormalities, such as diastasis recti, supraumbilical raphe, and hiatus hernia, are commonly associated. Additional features reported include gingival bleeding, ectopic tooth eruption, exophthalmos, loss of vision, nausea, and vomiting.","definition_xrefs":["Orphanet:140436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"infantile hemangioma of rare localization","termid":"MONDO:0016223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary intraosseous venous malformation","secondary_identifiers":["UMLS:C1847197","MESH:C564648","OMIM:606893","GARD:16961","SCTID:764100007","MEDGEN:376071"],"synonyms":[{"name":"hemangioma, intraosseous","type":"related"},{"name":"intraosseous hemangioma","type":"exact"},{"name":"osseous venous malformation","type":"exact"},{"name":"vascular malformation osseous","type":"related"},{"name":"vascular malformation, primary intraosseous","type":"related"}],"termid":"MONDO:0011744","xrefs":{"Monarch":{"xref_id":"0011744"}}}


id: PBO:0004356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP 5'-nucleotidase (predicted)","termid":"PBO:0004356"}


id: PBO:0086897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter; member of the sugar porter family; YFL040W is not an essential gene; may have a role in intracellular sterol transport","termid":"PBO:0086897"}


id: PBO:0084935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA transport regulator; essential nuclear protein; Mex67p and Mtr2p form a mRNA export complex which binds to RNA","termid":"PBO:0084935"}


id: MONDO:0015805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of botulism, a rare acquired neuromuscular junction disease with descending flaccid paralysis caused by botulinum neurotoxins (BoNTs), and is due to intestinal colonization by Clostridium botulinum leading to toxin-mediated infection with toxemia. The disease affects infants (infant botulism) and very rarely adults (adult intestinal botulism).","definition_xrefs":["Orphanet:178481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin-mediated infectious botulism","termid":"MONDO:0016468"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intestinal botulism","secondary_identifiers":["MEDGEN:731170","GARD:20151","SCTID:409563004","UMLS:C1443901","DOID:0050141"],"synonyms":[{"name":"intestinal colonisation botulism","type":"exact"},{"name":"intestinal colonization botulism","type":"exact"},{"name":"intestinal toxaemia botulism","type":"exact"},{"name":"intestinal toxemia botulism","type":"exact"},{"name":"intestinal toxin-mediated botulism","type":"exact"}],"termid":"MONDO:0015805","xrefs":{"Monarch":{"xref_id":"0015805"}}}


id: PBO:0003111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor EF-Ts Tsf1","termid":"PBO:0003111"}


id: GO:0150016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any dendrite in a dendritic tree that emerges near the basal pole of a neuron (e.g. in bipolar neurons, basal dendrites are either on the same side of the soma as the axon, or project toward the axon), and which is farthest away from the neuronal cell body (the soma).","definition_xrefs":["PMID:22683681","PMID:1720142","PMID:9214543","GOC:aruk","GOC:bc","PMID:20629984","PMID:17046728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal dendrite","termid":"GO:0097441"},{"relation_name":"is_a","term_name":"distal dendrite","termid":"GO:0150002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal distal dendrite","termid":"GO:0150016"}


id: GO:0019504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of stachydrine, N-methylproline methylbetaine, the betaine derivative of L-proline.","definition_xrefs":["PMID:24520058","PMID:1804402","PMID:10689197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"L-proline betaine metabolic process","termid":"GO:0019502"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-proline betaine catabolic process","secondary_identifiers":["MetaCyc:P561-PWY"],"synonyms":[{"name":"stachydrine breakdown","type":"exact"},{"name":"stachydrine catabolic process","type":"exact"},{"name":"stachydrine catabolism","type":"exact"},{"name":"stachydrine degradation","type":"exact"}],"termid":"GO:0019504"}


id: GO:0102581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 4-coumaryl-CoA + H+ = cyanidin 3-O-(6-O-(E)-4-coumaroyl-beta-D-glucoside) + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside-p-coumaroyltransferase activity (obsolete GO:0102581)","termid":"GO:0102581"}


id: GO:0044360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism effects a change in the frequency, rate or extent of the activity of a voltage-gated potassium channel in another organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of voltage-gated potassium channel activity in another organism (obsolete GO:0044360)","synonyms":[{"name":"modulation of voltage-gated potassium channel activity in other organism","type":"exact"}],"termid":"GO:0044360"}


id: PBO:0038786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylphosphatase 2","termid":"PBO:0038786"}


id: PBO:0043767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone COX17","termid":"PBO:0043767"}


id: GO:0042979
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008073"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of the enzyme ornithine decarboxylase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"},{"relation_name":"regulates","term_name":"ornithine decarboxylase activity","termid":"GO:0004586"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0016829"},{"rel_name":"regulates","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"ornithine decarboxylase regulator activity","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0042979","terms_by_termid":{"GO:0008073":null}}


id: MONDO:1012556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve dysplasia, non-human animal","termid":"MONDO:1011652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitral valve dysplasia, ass","secondary_identifiers":["OMIA:002521-9793"],"termid":"MONDO:1012556","xrefs":{"Monarch":{"xref_id":"1012556"}}}


id: PBO:0028004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_chromosome_condensation","termid":"PBO:0028004"}


id: MONDO:0017053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intermittent maple syrup urine disease (intermittent MSUD) is a mild form of MSUD where patients (when well) are asymptomatic with normal levels of branched-chain amino acids (BCAAs) but with catabolic stress are at risk of acute decompensation with ketoacidosis, which can lead to cerebral edema and coma if untreated.","definition_xrefs":["Orphanet:268173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maple syrup urine disease","termid":"MONDO:0009563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"intermittent maple syrup urine disease","secondary_identifiers":["MEDGEN:78690","NANDO:2201080","SCTID:405288003","UMLS:C0268569","GARD:17265"],"synonyms":[{"name":"intermittent BCKD deficiency","type":"exact"},{"name":"intermittent MSUD","type":"exact"},{"name":"intermittent branched-chain 2-ketoacid dehydrogenase deficiency","type":"exact"},{"name":"intermittent branched-chain alpha-ketoacid dehydrogenase deficiency","type":"exact"},{"name":"intermittent maple syrup urine disease","type":"exact"}],"termid":"MONDO:0017053","xrefs":{"Monarch":{"xref_id":"0017053"}}}


id: MONDO:1010868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any mucopolysaccharidosis that occurs in goats due to a mutation in the GNS gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder, non-human animal","termid":"MONDO:1012581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucopolysaccharidosis, GNS-related, goat","secondary_identifiers":["OMIA:000665-9925"],"synonyms":[{"name":"mucopolysaccharidosis IIID, goat","type":"related"}],"termid":"MONDO:1010868","xrefs":{"Monarch":{"xref_id":"1010868"}}}


id: PR:Q9UT11
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zrt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized zinc transporter P8A3.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.03","synonyms":[{"name":"Spom972h-zrt2","type":"exact"}],"termid":"PR:Q9UT11"}


id: PBO:0082127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aconitase; required for the tricarboxylic acid (TCA) cycle and also independently required for mitochondrial genome maintenance; component of the mitochondrial nucleoid; mutation leads to glutamate auxotrophy; mutation in human homolog ACO2 is associated with dominant optic nerve atrophy; human homolog ACO2 can complement yeast null mutant","termid":"PBO:0082127"}


id: PBO:0110399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDGFD downstream neighbor","termid":"PBO:0110399"}


id: GO:1902931
data:
  {"annotated_genes":["SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of alcohol biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","GO_REF:0000058","PMID:23332010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"negatively_regulates","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02104":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of alcohol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of alcohol anabolism","type":"exact"},{"name":"down regulation of alcohol biosynthesis","type":"exact"},{"name":"down regulation of alcohol biosynthetic process","type":"exact"},{"name":"down regulation of alcohol formation","type":"exact"},{"name":"down regulation of alcohol synthesis","type":"exact"},{"name":"down-regulation of alcohol anabolism","type":"exact"},{"name":"down-regulation of alcohol biosynthesis","type":"exact"},{"name":"down-regulation of alcohol biosynthetic process","type":"exact"},{"name":"down-regulation of alcohol formation","type":"exact"},{"name":"down-regulation of alcohol synthesis","type":"exact"},{"name":"downregulation of alcohol anabolism","type":"exact"},{"name":"downregulation of alcohol biosynthesis","type":"exact"},{"name":"downregulation of alcohol biosynthetic process","type":"exact"},{"name":"downregulation of alcohol formation","type":"exact"},{"name":"downregulation of alcohol synthesis","type":"exact"},{"name":"inhibition of alcohol anabolism","type":"narrow"},{"name":"inhibition of alcohol biosynthesis","type":"narrow"},{"name":"inhibition of alcohol biosynthetic process","type":"narrow"},{"name":"inhibition of alcohol formation","type":"narrow"},{"name":"inhibition of alcohol synthesis","type":"narrow"},{"name":"negative regulation of alcohol anabolism","type":"exact"},{"name":"negative regulation of alcohol biosynthesis","type":"exact"},{"name":"negative regulation of alcohol formation","type":"exact"},{"name":"negative regulation of alcohol synthesis","type":"exact"},{"name":"negative regulation of solventogenesis","type":"broad"}],"termid":"GO:1902931","terms_by_termid":{"GO:0010895":null}}


id: PBO:0038561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABI family member 3","termid":"PBO:0038561"}


id: MONDO:1012757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cerebellar ataxia that occurs in dogs due to a mutation in the VLDLR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar hypoplasia, VLDLR-associated, dog","secondary_identifiers":["OMIA:001947-9615"],"synonyms":[{"name":"Dandy-Walker-like malformation","type":"related"},{"name":"inferior cerebellar hypoplasia","type":"related"}],"termid":"MONDO:1012757","xrefs":{"Monarch":{"xref_id":"1012757"}}}


id: PBO:0090786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein Cfh1","termid":"PBO:0090786"}


id: PBO:0083033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta 1-pyrroline-5-carboxylate reductase; catalyzes the last step in proline biosynthesis","termid":"PBO:0083033"}


id: PATO:0000639
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer whose structure deteriorates or is lost over time due to an active pathological process.","definition_xrefs":["PATOC:mb","PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"has_part","term_name":"hypotrophic","termid":"PATO:0000585"},{"relation_name":"is_a","term_name":"degeneration","termid":"PATO:0002037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerate","synonyms":[{"name":"degeneration","type":"narrow"}],"termid":"PATO:0000639"}


id: PBO:0018247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex associated protein (Meakin) Moa1","termid":"PBO:0018247"}


id: PBO:0081978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 5A","termid":"PBO:0081978"}


id: GO:0031056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent alteration of a histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone modification (obsolete GO:0031056)","termid":"GO:0031056"}


id: PATO:0001198
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001198 unmodified direction (obsolete PATO:0001198)","termid":"PATO:0001198"}


id: PBO:0081288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 72A, pseudogene","termid":"PBO:0081288"}


id: GO:1905638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial mRNA catabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:27122350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitochondrial RNA catabolic process","termid":"GO:0000961"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"},{"relation_name":"is_a","term_name":"regulation of mitochondrial mRNA catabolic process","termid":"GO:1905637"},{"relation_name":"negatively_regulates","term_name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"negative regulation of mitochondrial mRNA catabolic process","synonyms":[{"name":"down regulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"down-regulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"downregulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"inhibition of mitochondrial mRNA catabolic process","type":"narrow"}],"termid":"GO:1905638"}


id: PBO:0065658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type H","termid":"PBO:0065658"}


id: MONDO:0007734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder caused by mutations in the TGIF gene mapped to chromosome 18p11.3. It is characterized by semilobar holoprosencephaly, hypotelorism, and ptosis.","definition_xrefs":["NCIT:C75475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 4","secondary_identifiers":["MESH:C564180","DOID:0110880","MEDGEN:374488","OMIM:142946","UMLS:C1840528"],"synonyms":[{"name":"HPE4","type":"exact"},{"name":"TGIF1 holoprosencephaly","type":"exact"},{"name":"holoprosencephaly 4","type":"exact"},{"name":"holoprosencephaly caused by mutation in TGIF1","type":"exact"},{"name":"holoprosencephaly type 4","type":"exact"}],"termid":"MONDO:0007734","xrefs":{"Monarch":{"xref_id":"0007734"}}}


id: SO:0001043
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attachment site located on a conjugative transposon and used for site-specific integration of a conjugative transposon.","definition_xrefs":["Phigo:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"},{"relation_name":"part_of","term_name":"conjugative_transposon","termid":"SO:0000371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attCtn_site","synonyms":[{"name":"attCtn site","type":"exact"}],"termid":"SO:0001043"}


id: PBO:0117074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDK2 antisense RNA 1","termid":"PBO:0117074"}


id: PBO:0002454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MS ion channel protein 2 (predicted)","termid":"PBO:0002454"}


id: PBO:0012862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 3'-5' exonuclease for RNA 3' ss-tail","termid":"PBO:0012862"}


id: MONDO:0001027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gonorrhea that involves the seminal vesicle.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"vesiculitis","termid":"MONDO:0004767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal seminal vesiculitis","secondary_identifiers":["DOID:10400","MEDGEN:662073","icd11.foundation:1226540022","UMLS:C0578661","SCTID:301990003"],"synonyms":[{"name":"gonococcal seminal vesiculitis (acute)","type":"exact"},{"name":"gonorrhea of seminal vesicle","type":"exact"},{"name":"gonorrhoea of seminal vesicle","type":"exact"},{"name":"seminal vesicle gonorrhea","type":"exact"},{"name":"seminal vesicle gonorrhoea","type":"exact"}],"termid":"MONDO:0001027","xrefs":{"Monarch":{"xref_id":"0001027"}}}


id: PBO:0072529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 59","termid":"PBO:0072529"}


id: GO:0160222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-alanine + D-serine = ADP + D-alanyl-D-serine + H+ + phosphate.","definition_xrefs":["EC:6.3.2.35","RHEA:27706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"D-alanine-D-serine ligase activity","secondary_identifiers":["KEGG_REACTION:R09595","MetaCyc:RXN-11299"],"termid":"GO:0160222"}


id: GO:0010373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of gibberellins.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gibberellin biosynthetic process","termid":"GO:0010371"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of gibberellin biosynthetic process","synonyms":[{"name":"negative regulation of gibberellic acid biosynthetic process","type":"narrow"}],"termid":"GO:0010373"}


id: PBO:0063104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinsonism associated deglycase","termid":"PBO:0063104"}


id: MONDO:0022790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft tongue","secondary_identifiers":["MEDGEN:82731","UMLS:C0266111"],"synonyms":[{"name":"bifid tongue","type":"related"},{"name":"cleft tongue syndrome","type":"related"}],"termid":"MONDO:0022790","xrefs":{"Monarch":{"xref_id":"0022790"}}}


id: GO:0034801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4-dinitrocyclohexanone + OH- = 4,6-dinitrohexanoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4-dinitrocyclohexanone hydrolase activity (obsolete GO:0034801)","termid":"GO:0034801"}


id: PBO:0053680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 867","termid":"PBO:0053680"}


id: PBO:0069578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 851, pseudogene","termid":"PBO:0069578"}


id: GO:0061158
data:
  {"annotated_genes":["SJAG_04825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118615],"is_not":false,"summary":null,"term":"GO:0061158"}]},"cv_name":"biological_process","definition":"An mRNA destabilization process in which one or more RNA-binding proteins associate with the 3'-untranslated region (UTR) of an mRNA.","definition_xrefs":["GOC:dph","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04825":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"3'-UTR-mediated mRNA destabilization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061158","terms_by_termid":{"GO:0061158":null}}


id: GO:0047359
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkenyl-2-acylglycerol + CDP-choline = plasmenylcholine + CMP.","definition_xrefs":["EC:2.7.8.22","MetaCyc:2.7.8.22-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016780","GO:0003674"],"is_obsolete":false,"name":"1-alkenyl-2-acylglycerol choline phosphotransferase activity","secondary_identifiers":["RHEA:36227"],"synonyms":[{"name":"CDP-choline-1-alkenyl-2-acyl-glycerol phosphocholinetransferase activity","type":"related"},{"name":"CDP-choline:1-alkenyl-2-acylglycerol cholinephosphotransferase activity","type":"related"}],"termid":"GO:0047359"}


id: PBO:0110074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQT complex CUE domain protein, human ASCC2 ortholog Rqt3","termid":"PBO:0110074"}


id: PR:Q10066
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aru1 gene.","definition_xrefs":["UniProtKB:Q10066","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase Aru1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.07","synonyms":[{"name":"SPAC3H1.07","type":"related"},{"name":"Spom972h-aru1","type":"exact"}],"termid":"PR:Q10066"}


id: GO:0010685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetracyclic triterpenoid compounds, terpenoids with six isoprene units and 4 carbon rings.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid metabolic process","termid":"GO:0006722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"tetracyclic triterpenoid metabolic process","synonyms":[{"name":"tetracyclic triterpenoid metabolism","type":"exact"}],"termid":"GO:0010685"}


id: GO:0018045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-lysine amide by hydrolysis and oxidation of an interior Lys-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0092"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-lysine amidation (obsolete GO:0018045)","termid":"GO:0018045"}


id: PR:Q10422
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25G10.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C25G10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.01","synonyms":[{"name":"Spom972h-SPAC25G10.01","type":"exact"}],"termid":"PR:Q10422"}


id: GO:0098867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of an intramembranous bone that contributes to the shaping of the bone.","definition_xrefs":["PMID:26399686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone growth","termid":"GO:0098868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intramembranous bone growth","termid":"GO:0098867"}


id: FYPO:0007300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein aggregate center formation does not occur. Protein aggregate centers are composed of chaperones and misfolded proteins, and are reversibly formed in the nucleus and cytosol to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein aggregate center formation","termid":"FYPO:0007298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein aggregate center formation","synonyms":[{"name":"abolished PAC formation","type":"exact"},{"name":"abolished protein aggregate center formation during mitotic cell cycle","type":"related"},{"name":"abolished protein aggregate center formation during vegetative growth","type":"exact"},{"name":"abolished protein aggregate centre formation","type":"exact"},{"name":"protein aggregate center formation abolished","type":"exact"}],"termid":"FYPO:0007300"}


id: PBO:0000487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr3 (predicted)","termid":"PBO:0000487"}


id: PBO:0089619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint WD repeat protein Bub3","termid":"PBO:0089619"}


id: PBO:0083575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps with verified gene GPR1/YDL035C; YDL034W is not an essential gene","termid":"PBO:0083575"}


id: SO:0001330
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_N2_2prime_O_trimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_N2_2_prime_O_trimethylguanosine","secondary_identifiers":["RNAMOD:035"],"synonyms":[{"name":"N2,N2,2'-O-trimethylguanosine","type":"exact"},{"name":"m22Gmv","type":"exact"}],"termid":"SO:0001330"}


id: GO:0033706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: L-quinate + NAD(P)+ = 3-dehydroquinate + NAD(P)H + H+, and shikimate + NAD(P)+ = 3-dehydroshikimate + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.282"],"gene_count":0,"genotype_count":0,"name":"obsolete quinate/shikimate dehydrogenase activity (obsolete GO:0033706)","synonyms":[{"name":"L-quinate:NAD(P)+ 3-oxidoreductase activity","type":"related"},{"name":"YdiB","type":"related"},{"name":"quinate/shikimate dehydrogenase activity","type":"exact"}],"termid":"GO:0033706"}


id: PBO:0047842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase","termid":"PBO:0047842"}


id: GO:0102749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + dihydrogeranylgeranyl-chlorophyll a + NADPH = tetrahydrogeranylgeranyl-chlorophyll a + NADP.","definition_xrefs":["GOC:pz","EC:1.3.1.-"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrogeranylgeranyl-chlorophyll a reductase activity (obsolete GO:0102749)","termid":"GO:0102749"}


id: PBO:0085757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in negative regulation of PolIII transcription; effector kinase of the TOR signaling pathway and phosphorylates Rpc53p to regulate ribosome and tRNA biosynthesis; member of the LAMMER family of protein kinases, which are serine/threonine kinases also capable of phosphorylating tyrosine residues; capable of autophosphorylation","termid":"PBO:0085757"}


id: PBO:0003437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex theta subunit Cct8","termid":"PBO:0003437"}


id: PR:O74361
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC28E12.04 gene.","definition_xrefs":["UniProtKB:O74361","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C28E12.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.04","synonyms":[{"name":"Spom972h-SPBC28E12.04","type":"exact"}],"termid":"PR:O74361"}


id: PBO:0044607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 12 like 1","termid":"PBO:0044607"}


id: GO:0042760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["PMID:7744868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"very long-chain fatty acid metabolic process","termid":"GO:0000038"},{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"very long-chain fatty acid catabolic process","synonyms":[{"name":"very-long-chain fatty acid breakdown","type":"exact"},{"name":"very-long-chain fatty acid catabolic process","type":"exact"},{"name":"very-long-chain fatty acid catabolism","type":"exact"},{"name":"very-long-chain fatty acid degradation","type":"exact"}],"termid":"GO:0042760"}


id: GO:0018214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a carboxy group to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein carboxylation","synonyms":[{"name":"protein amino acid carboxylation","type":"exact"}],"termid":"GO:0018214"}


id: PBO:0088027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-snRNP associated splicing factor; similar to the mammalian splicing factor SAP49; proposed to function as a U2-snRNP assembly factor along with Hsh155p and binding partner Cus1p; contains two RNA recognition motifs (RRM)","termid":"PBO:0088027"}


id: MONDO:0014967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any visceral heterotaxy in which the cause of the disease is a mutation in the PKD1L1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 8, autosomal","secondary_identifiers":["UMLS:C4310668","OMIM:617205","MEDGEN:934635"],"synonyms":[{"name":"HTX8","type":"exact"},{"name":"PKD1L1 visceral heterotaxy","type":"exact"},{"name":"heterotaxy, visceral, 8, autosomal","type":"exact"},{"name":"heterotaxy, visceral, 8, autosomal; HTX8","type":"exact"},{"name":"visceral heterotaxy caused by mutation in PKD1L1","type":"exact"}],"termid":"MONDO:0014967","xrefs":{"Monarch":{"xref_id":"0014967"}}}


id: MONDO:0033373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 64","secondary_identifiers":["OMIM:618004","DOID:0070375","MEDGEN:1633501","UMLS:C4693899"],"synonyms":[{"name":"DEE64","type":"exact"},{"name":"EIEE64","type":"exact"},{"name":"developmental and epileptic encephalopathy 64","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 64","type":"exact"}],"termid":"MONDO:0033373","xrefs":{"Monarch":{"xref_id":"0033373"}}}


id: GO:0140268
data:
  {"annotated_genes":["SJAG_04413","SJAG_03170","SJAG_01564","SJAG_01329","SJAG_01168","SJAG_03247","SJAG_02613"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77302,91821,97782,104686,111970,117832,118976],"is_not":false,"summary":null,"term":"GO:0140268"}]},"cv_name":"cellular_component","definition":"A contact site between the endoplasmic reticulum membrane and the plasma membrane, structured by bridging complexes.","definition_xrefs":["PMID:29290560","PMID:27955928","PMID:29782498","PMID:23041194","PMID:30012696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01168":null,"SJAG_01329":null,"SJAG_01564":null,"SJAG_02613":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_04413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"endoplasmic reticulum-plasma membrane contact site","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"EPCS","type":"exact"},{"name":"ER-PM contact site","type":"exact"},{"name":"ER-plasma membrane contact site","type":"exact"},{"name":"endoplasmic reticulum-plasma membrane contact junction","type":"exact"}],"termid":"GO:0140268","terms_by_termid":{"GO:0140268":null}}


id: MONDO:0021272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary orthostatic hypotension","termid":"MONDO:0015914"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inherited orthostatic hypotension","secondary_identifiers":["OMIMPS:223360","UMLS:C5681106","GARD:21878","Orphanet:448426","MEDGEN:1842591"],"termid":"MONDO:0021272","xrefs":{"Monarch":{"xref_id":"0021272"}}}


id: FYPO:0008022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing alanine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002058"],"is_obsolete":false,"name":"abolished cell population growth on alanine nitrogen source","synonyms":[{"name":"abolished alanine utilization","type":"related"},{"name":"abolished growth on alanine nitrogen source","type":"broad"},{"name":"abolished vegetative cell population growth on alanine nitrogen source","type":"exact"},{"name":"cell population growth on alanine nitrogen source abolished","type":"exact"}],"termid":"FYPO:0008022"}


id: GO:0007529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process in which a synapse between a motor neuron and a muscle is initially formed.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"},{"relation_name":"part_of","term_name":"neuromuscular junction development","termid":"GO:0007528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of synaptic specificity at neuromuscular junction","termid":"GO:0007529"}


id: GO:0043063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the intracellular bridge. An intracellular bridge is a direct link between the cytoplasms of sister cells that allows cells to communicate with one another.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular structure organization","termid":"GO:0043062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intercellular bridge organization","synonyms":[{"name":"intercellular bridge organisation","type":"exact"},{"name":"intercellular bridge organization and biogenesis","type":"related"}],"termid":"GO:0043063"}


id: MONDO:0018604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary nonpolyposis colorectal cancer characterized by the absence of germline mutations in DNA mismatch-repair genes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary nonpolyposis colon cancer","termid":"MONDO:0018630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"familial colorectal cancer type X","secondary_identifiers":["GARD:21840","Orphanet:440437","UMLS:C3896578","MEDGEN:856172","NCIT:C120084"],"synonyms":[{"name":"FCCTX","type":"exact"},{"name":"familial colorectal cancer type X","type":"exact"}],"termid":"MONDO:0018604","xrefs":{"Monarch":{"xref_id":"0018604"}}}


id: GO:0021508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a ventral region of glial cells in the neural tube that provides inductive signals for the specification of neuronal cell types. The floor plate is evident at the ventral midline by the neural fold stage.","definition_xrefs":["PMID:11262869","GOC:cls","GOC:dph","GOC:jid","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"ventral midline development","termid":"GO:0007418"},{"relation_name":"part_of","term_name":"floor plate morphogenesis","termid":"GO:0033505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floor plate formation","termid":"GO:0021508"}


id: GO:0070396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipoteichoic acid, which is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor.","definition_xrefs":["GOC:add","PMID:14665680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid catabolic process","termid":"GO:0070393"},{"relation_name":"is_a","term_name":"lipoteichoic acid metabolic process","termid":"GO:0070394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoteichoic acid catabolic process","synonyms":[{"name":"lipoteichoic acid breakdown","type":"exact"},{"name":"lipoteichoic acid catabolism","type":"exact"},{"name":"lipoteichoic acid degradation","type":"exact"}],"termid":"GO:0070396"}


id: MONDO:0019894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-distal monosomy 7p (obsolete MONDO:0019894)","secondary_identifiers":["Orphanet:96136"],"synonyms":[{"name":"non-distal deletion 7p","type":"exact"},{"name":"non-distal monosomy type 7p","type":"exact"},{"name":"non-telomeric monosomy 7p","type":"exact"}],"termid":"MONDO:0019894","xrefs":{"Monarch":{"xref_id":"0019894"}}}


id: MONDO:0017440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Humeral agenesis/hypoplasia is a rare, non-syndromic limb reduction defect characterized by the unilateral or bilateral presence of a short arm with completely absent or underdeveloped humerus, frequently associated with ulnar and/or radial malformations. Patients may present with the appearance of the forearm directly attached to the shoulder, no articulation at the shoulder joint, impossible passive extension of the arm beyond the mid-axillary line, no elbow joints, bowing of the radius, a short ulna and/or ulnar/radial deviation of the hand at the wrist.","definition_xrefs":["Orphanet:294973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"humeral agenesis/hypoplasia","secondary_identifiers":["GARD:21192","MEDGEN:672328","icd11.foundation:1431381856","UMLS:C0685375"],"synonyms":[{"name":"congenital absence of humerus","type":"exact"},{"name":"congenital hypoplasia of humerus","type":"exact"},{"name":"humeral intercalary meromelia","type":"exact"}],"termid":"MONDO:0017440","xrefs":{"Monarch":{"xref_id":"0017440"}}}


id: PBO:0045096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLX6 antisense RNA 1","termid":"PBO:0045096"}


id: MONDO:1011499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa simplex that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa, cattle","termid":"MONDO:1010751"},{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, non-human animal","termid":"MONDO:1011428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, cattle","secondary_identifiers":["OMIA:002082-9913"],"termid":"MONDO:1011499","xrefs":{"Monarch":{"xref_id":"1011499"}}}


id: PBO:0030289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_glycerol_carbon_source","termid":"PBO:0030289"}


id: MONDO:0005735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dracunculiasis (obsolete MONDO:0005735)","termid":"MONDO:0005735","xrefs":{"Monarch":{"xref_id":"0005735"}}}


id: PBO:0003769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3g","termid":"PBO:0003769"}


id: MONDO:0100023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neonatal/infantile epilepsy syndrome that is characterized by the onset of seizures that start in the in the neonate between day 1 and 7 of life and are often unilateral clonic events that recur and may alternate sides from seizure to seizure. Seizures can be repetitive over hours to days. Seizures remit by 4-6 months of age. A proportion of those affected may have seizures in later life. The child is expected to have typical developmental progress.","definition_xrefs":["PMID:28276062"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neonatal/infantile epilepsy syndrome","termid":"MONDO:0100022"},{"relation_name":"is_a","term_name":"infantile-onset epilepsy","termid":"MONDO:0100207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"self-limited familial neonatal epilepsy","synonyms":[{"name":"self-limited familial and non-familial neonatal seizures","type":"exact"},{"name":"self-limited familial neonatal-infantile epilepsy","type":"narrow"}],"termid":"MONDO:0100023","xrefs":{"Monarch":{"xref_id":"0100023"}}}


id: GO:0048911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an efferent axon in the anterior lateral line nerve over time from its formation to the mature structure. This process includes axonogenesis and pathfinding of the efferent axons in the anterior lateral line nerve.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"efferent axon development in a lateral line nerve","termid":"GO:0048894"},{"relation_name":"part_of","term_name":"anterior lateral line nerve development","termid":"GO:0048909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"efferent axon development in anterior lateral line nerve","termid":"GO:0048911"}


id: GO:0018292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of molybdenum into a protein via L-cysteinyl molybdopterin.","definition_xrefs":["RESID:AA0142"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdenum incorporation via L-cysteinyl molybdopterin (obsolete GO:0018292)","termid":"GO:0018292"}


id: PBO:0027104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_termination_of_RNA_polymerase_II_transcription_at_tDNA","termid":"PBO:0027104"}


id: PBO:0089492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proline-tRNA ligase","termid":"PBO:0089492"}


id: GO:0010706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gangliosides that begins with the formation of lactosylceramides, Gal-beta-(1->4)-Glc-beta-(1->1') ceramides, any compound formed by the replacement of the glycosidic C1 hydroxyl group of lactose by a ceramide group.","definition_xrefs":["GOC:dph","GOC:tb","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglioside biosynthetic process","termid":"GO:0001574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ganglioside biosynthetic process via lactosylceramide","synonyms":[{"name":"biosynthesis of lactosylceramide precursor to ganglioside","type":"related"},{"name":"ganglioside biosynthesis via lactosylceramide biosynthesis","type":"exact"},{"name":"lactosylceramide biosynthesis leading to ganglioside","type":"related"},{"name":"lactosylceramide biosynthetic process leading to ganglioside","type":"related"}],"termid":"GO:0010706"}


id: PBO:0060381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VIIA and Rab interacting protein","termid":"PBO:0060381"}


id: MONDO:0017355
data:
  {"annotated_genes":["SJAG_01903","SJAG_00516","SJAG_03457","SJAG_00212","SJAG_00120","SJAG_02235","SJAG_01471","SJAG_00660"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87582,87583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[85371,85372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014702"},{"annotations":[87430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018163"},{"annotations":[85518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013051"},{"annotations":[87165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027462"},{"annotations":[87164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027451"},{"annotations":[86349,86350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[86842,86843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011006"},{"annotations":[87089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009400"},{"annotations":[87047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009401"},{"annotations":[85957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of proline metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of ornithine or proline metabolism","termid":"MONDO:0019230"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_00660":null,"SJAG_01471":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of proline metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842611","icd11.foundation:1707028291","GARD:21157","UMLS:C5681004","Orphanet:289866"],"synonyms":[{"name":"disorder of proline metabolism","type":"exact"},{"name":"inborn error of proline metabolic process","type":"exact"},{"name":"inborn proline metabolic process disorder","type":"exact"},{"name":"rare inborn error of proline metabolic process","type":"exact"}],"termid":"MONDO:0017355","terms_by_termid":{"MONDO:0009053":null,"MONDO:0009400":null,"MONDO:0009401":null,"MONDO:0010208":null,"MONDO:0011006":null,"MONDO:0013051":null,"MONDO:0014702":null,"MONDO:0014706":null,"MONDO:0018163":null,"MONDO:0027451":null,"MONDO:0027462":null},"xrefs":{"Monarch":{"xref_id":"0017355"}}}


id: PBO:0054798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2211","termid":"PBO:0054798"}


id: FYPO:0002064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a 3'-5'-exoribonuclease activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 3'-5'-exoribonuclease activity","termid":"FYPO:0002063"},{"relation_name":"is_a","term_name":"abolished ribonuclease activity","termid":"FYPO:0006301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abolished 3'-5'-exoribonuclease activity","synonyms":[{"name":"3'-5'-exoribonuclease activity abolished","type":"exact"}],"termid":"FYPO:0002064"}


id: MOD:01480
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue into an 5'-fluoro-L-tryptophan.","definition_xrefs":["PubMed:18688235","PubMed:8172898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-tryptophan","termid":"MOD:01226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-fluoro-L-tryptophan","synonyms":[{"name":"5-fluorotryptophan","type":"exact"}],"termid":"MOD:01480"}


id: GO:0019473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including glutarate, by acetylation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process","termid":"GO:0019477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-lysine catabolic process to glutarate, by acetylation","secondary_identifiers":["MetaCyc:LYSDEGII-PWY"],"synonyms":[{"name":"L-lysine breakdown to glutarate, by acetylation","type":"exact"},{"name":"L-lysine degradation to glutarate, by acetylation","type":"exact"}],"termid":"GO:0019473"}


id: PBO:0041762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPN1 antisense RNA 1","termid":"PBO:0041762"}


id: MONDO:0043267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Necrotizing VASCULITIS of small and medium size vessels, developing as a complication in RHEUMATOID ARTHRITIS patients. It is characterized by peripheral vascular lesions, cutaneous ulcers, peripheral gangrene, and mononeuritis multiplex.","definition_xrefs":["MESH:D056653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatoid arthritis","termid":"MONDO:0008383"},{"relation_name":"is_a","term_name":"autoimmune vasculitis","termid":"MONDO:0030703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"rheumatoid vasculitis","secondary_identifiers":["GARD:7577","NANDO:1200265","UMLS:C0240903","icd11.foundation:1398254566","MEDGEN:69122","SCTID:400054000"],"synonyms":[{"name":"Vasculitides, rheumatoid","type":"related"},{"name":"rheumatoid Vasculitides","type":"related"},{"name":"rheumatoid vasculitis","type":"exact"},{"name":"vasculitis, rheumatoid","type":"related"}],"termid":"MONDO:0043267","xrefs":{"Monarch":{"xref_id":"0043267"}}}


id: PBO:0117177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSGALNACT1 antisense RNA 1","termid":"PBO:0117177"}


id: FYPO:0007682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly, exploratory movement, or disassembly of the Cdc42-containing cortical polarity patch is abnormal during mating.","definition_xrefs":["PMID:30279276","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000301","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cortical polarity patch dynamics during mating","synonyms":[{"name":"abnormal cortical polarity patch dynamics during conjugation with cellular fusion","type":"exact"},{"name":"altered cortical polarity patch dynamics during mating","type":"exact"}],"termid":"FYPO:0007682"}


id: PBO:0069585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 859, pseudogene","termid":"PBO:0069585"}


id: MONDO:0000555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive hypophosphatemic rickets (obsolete MONDO:0000555)","termid":"MONDO:0000555","xrefs":{"Monarch":{"xref_id":"0000555"}}}


id: GO:0060939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epicardial-derived cardiac fibroblast over time, from its formation to the mature state. A epicardial-derived cardiac fibroblast is a connective tissue cell of the heart that arises from the epicardium and secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell development","termid":"GO:0060936"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac fibroblast cell differentiation","termid":"GO:0060938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac fibroblast cell development","termid":"GO:0060939"}


id: PBO:0052421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kirre like nephrin family adhesion molecule 3","termid":"PBO:0052421"}


id: PBO:0045189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 2","termid":"PBO:0045189"}


id: PBO:0045836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 26","termid":"PBO:0045836"}


id: PBO:0071365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 24","termid":"PBO:0071365"}


id: PBO:0116716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD10 and GCKIII kinases associated 1","termid":"PBO:0116716"}


id: PBO:0091568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex assembly protein","termid":"PBO:0091568"}


id: PBO:0003127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase (predicted)","termid":"PBO:0003127"}


id: PBO:0034499
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomere_assembly","termid":"PBO:0034499"}


id: GO:0048867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a stem cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["CL:0000034","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"stem cell fate commitment","termid":"GO:0048865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell fate determination","termid":"GO:0048867"}


id: MONDO:0975952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"famililal cerebral cavernous malformations","termid":"MONDO:0031037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cerebral cavernous malformations 5","secondary_identifiers":["OMIM:621032"],"termid":"MONDO:0975952","xrefs":{"Monarch":{"xref_id":"0975952"}}}


id: FYPO:0002912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, is elongated, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, elongated cell","termid":"FYPO:0004603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000032","FYPO:0000004","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, elongated multinucleate cell","synonyms":[{"name":"inviable after spore germination, multinucleate elongated cell","type":"exact"},{"name":"inviable after spore germination, undivided elongated multinucleate cell","type":"exact"},{"name":"inviable following spore germination, without cell division, elongated multinucleate cell","type":"exact"},{"name":"inviable germinated spore, without cell division, elongated multinucleate cell","type":"exact"},{"name":"lethal after spore germination, without cell division, elongated multinucleate cell","type":"exact"}],"termid":"FYPO:0002912"}


id: MOD:01404
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-asparagine residue to form L-asparagine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:7592021","PubMed:8557573","RESID:AA0481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-asparagine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1,3-diamino-3-oxopropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1,3-bisazanyl-3-oxopropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Asn-Cys)","type":"exact"},{"name":"L-asparagine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01404"}


id: MONDO:0003629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uterine corpus serous adenocarcinoma (obsolete MONDO:0003629)","termid":"MONDO:0003629","xrefs":{"Monarch":{"xref_id":"0003629"}}}


id: GO:0098797
data:
  {"annotated_genes":["SJAG_00800","SJAG_02805","SJAG_02444","SJAG_04677","SJAG_01978","SJAG_05229","SJAG_02233","SJAG_00104","SJAG_03081","SJAG_04675","SJAG_04026","SJAG_01167"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74704,78455,58326,108641],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[71203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038038"},{"annotations":[74636,106810,75658,80723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005834"},{"annotations":[78023,78264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033573"},{"annotations":[74815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"Any protein complex that is part of the plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01978":null,"SJAG_02233":null,"SJAG_02444":null,"SJAG_02805":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasma membrane protein complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098797","terms_by_termid":{"GO:0005834":null,"GO:0005891":null,"GO:0030122":null,"GO:0033573":null,"GO:0038038":null}}


id: GO:0070194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of a synaptonemal complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"synaptonemal complex organization","termid":"GO:0070193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synaptonemal complex disassembly","termid":"GO:0070194"}


id: GO:0097545
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular anatomical entity that is part of an axoneme consisting of a doublet microtubule.","definition_xrefs":["PMID:5044758","PMID:5664206","GOC:krc","Wikipedia:Axoneme","GOC:pr","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal doublet microtubule","synonyms":[{"name":"DMT","type":"related"},{"name":"axonemal outer doublet","type":"exact"},{"name":"axoneme outer doublet","type":"exact"},{"name":"outer doublet","type":"broad"},{"name":"outer-doublet microtubules","type":"related"}],"termid":"GO:0097545"}


id: GO:0031139
data:
  {"annotated_genes":["SJAG_03501","SJAG_00993","SJAG_03081","SJAG_00472","SJAG_03309","SJAG_02472","SJAG_03453","SJAG_04009","SJAG_00664","SJAG_01718","SJAG_00526","SJAG_02233","SJAG_02444","SJAG_01345","SJAG_01794","SJAG_00256","SJAG_04206","SJAG_02380","SJAG_01509","SJAG_00117","SJAG_00975","SJAG_03735","SJAG_05000","SJAG_00781","SJAG_02266","SJAG_04682","SJAG_03802","SJAG_01254","SJAG_01311","SJAG_03340","SJAG_04813","SJAG_06638","SJAG_02923","SJAG_02785","SJAG_01113","SJAG_01978","SJAG_04026","SJAG_02773","SJAG_03346","SJAG_02379","SJAG_00210","SJAG_02066","SJAG_02592","SJAG_00600","SJAG_03486","SJAG_01699","SJAG_02730","SJAG_02723","SJAG_01084","SJAG_03067","SJAG_00990","SJAG_05153","SJAG_00514","SJAG_04509","SJAG_04312","SJAG_03623"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98878,99768,100446,102072,105234,107451,111681],"is_not":false,"summary":null,"term":"GO:0031139"},{"annotations":[98742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031141"},{"annotations":[115888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[88370,106593,116444,116782,89553,118530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010514"},{"annotations":[104814,116372,93269,94567,106966,106133,114774,109322,115835,88547,100861,106228,94707,106812,107162,102164,91749],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010515"},{"annotations":[93669],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[97374,106596,92528,89575,96712,93670],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[71204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000750"},{"annotations":[116578,119391,108886,104758,88193,99825,101705,109117,119390,103678,107368,100819],"is_not":false,"rel_names":["positively_regulates","regulates","is_a"],"summary":null,"term":"GO:1900237"},{"annotations":[88237,91188,90209,93823,111673],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902917"},{"annotations":[91193,111674,115891,106696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032005"}]},"cv_name":"biological_process","definition":"Any process that increases the rate or frequency of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conjugation with cellular fusion","termid":"GO:0031137"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00210":null,"SJAG_00256":null,"SJAG_00472":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00664":null,"SJAG_00781":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00993":null,"SJAG_01084":null,"SJAG_01113":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01345":null,"SJAG_01509":null,"SJAG_01699":null,"SJAG_01718":null,"SJAG_01794":null,"SJAG_01978":null,"SJAG_02066":null,"SJAG_02233":null,"SJAG_02266":null,"SJAG_02379":null,"SJAG_02380":null,"SJAG_02444":null,"SJAG_02472":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02785":null,"SJAG_02923":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03309":null,"SJAG_03340":null,"SJAG_03346":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03623":null,"SJAG_03735":null,"SJAG_03802":null,"SJAG_04009":null,"SJAG_04026":null,"SJAG_04206":null,"SJAG_04312":null,"SJAG_04509":null,"SJAG_04682":null,"SJAG_04813":null,"SJAG_05000":null,"SJAG_05153":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"positive regulation of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of conjugation with cellular fusion","type":"narrow"},{"name":"stimulation of conjugation with cellular fusion","type":"narrow"},{"name":"up regulation of conjugation with cellular fusion","type":"exact"},{"name":"up-regulation of conjugation with cellular fusion","type":"exact"},{"name":"upregulation of conjugation with cellular fusion","type":"exact"}],"termid":"GO:0031139","terms_by_termid":{"GO:0000750":null,"GO:0010514":null,"GO:0010515":null,"GO:0031139":null,"GO:0031141":null,"GO:0031142":null,"GO:0032005":null,"GO:0071507":null,"GO:0090029":null,"GO:1900237":null,"GO:1902917":null}}


id: PATO:0000235
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000235 odor_acuity (obsolete PATO:0000235)","termid":"PATO:0000235"}


id: MONDO:0000077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nystagmus (obsolete MONDO:0000077)","synonyms":[{"name":"obsolete nystagmus (disease)","type":"exact"}],"termid":"MONDO:0000077","xrefs":{"Monarch":{"xref_id":"0000077"}}}


id: GO:0045749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of S phase of mitotic cell cycle activity.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of S phase of mitotic cell cycle (obsolete GO:0045749)","synonyms":[{"name":"down regulation of S phase of mitotic cell cycle","type":"exact"},{"name":"down-regulation of S phase of mitotic cell cycle","type":"exact"},{"name":"downregulation of S phase of mitotic cell cycle","type":"exact"},{"name":"inhibition of S phase of mitotic cell cycle","type":"narrow"},{"name":"negative regulation of S phase of mitotic cell cycle","type":"exact"},{"name":"negative regulation of S-phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0045749"}


id: PBO:0001391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf7","termid":"PBO:0001391"}


id: GO:1904201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of iodide transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:20392814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic anion transport","termid":"GO:0044070"},{"relation_name":"regulates","term_name":"iodide transport","termid":"GO:0015705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of iodide transport","termid":"GO:1904201"}


id: GO:1900049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone exchange.","definition_xrefs":["PMID:20332092","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone exchange (obsolete GO:1900049)","synonyms":[{"name":"regulation of histone chaperone","type":"related"},{"name":"regulation of histone displacement","type":"exact"},{"name":"regulation of histone replacement","type":"exact"}],"termid":"GO:1900049"}


id: PBO:0066119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like family 12","termid":"PBO:0066119"}


id: GO:0060499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a fibroblast growth factor-type receptor binding to one of its physiological ligands resulting in the formation of the lung bud along the lateral-esophageal sulcus.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete fibroblast growth factor receptor signaling pathway involved in lung induction (obsolete GO:0060499)","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in lung induction","type":"exact"}],"termid":"GO:0060499"}


id: PBO:0067571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 726, pseudogene","termid":"PBO:0067571"}


id: PBO:0075753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP receptor subunit beta","termid":"PBO:0075753"}


id: PBO:0064357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-melanin concentrating hormone","termid":"PBO:0064357"}


id: GO:0042474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the middle ear are generated and organized. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window).","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"ear morphogenesis","termid":"GO:0042471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"middle ear morphogenesis","termid":"GO:0042474"}


id: GO:0052444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of symbiont salicylic acid-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway (obsolete GO:0052444)","synonyms":[{"name":"modulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"modulation of defense-related symbiont SA-mediated signal transduction pathway by organism","type":"exact"}],"termid":"GO:0052444"}


id: GO:0046561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity similar to that of pepsin A, preferring hydrophobic residues at P1 and P1', but also cleaving Gly20-Glu in the B chain of insulin. Clots milk, and activates trypsinogen.","definition_xrefs":["EC:3.4.23.20"],"gene_count":0,"genotype_count":0,"name":"obsolete penicillopepsin activity (obsolete GO:0046561)","synonyms":[{"name":"Penicillium aspartic proteinase activity","type":"related"},{"name":"Penicillium caseicolum aspartic proteinase activity","type":"related"},{"name":"Penicillium citrinum acid proteinase activity","type":"related"},{"name":"Penicillium citrinum aspartic proteinase activity","type":"related"},{"name":"Penicillium cyclopium acid proteinase activity","type":"related"},{"name":"Penicillium duponti aspartic proteinase activity","type":"related"},{"name":"Penicillium expansum acid proteinase activity","type":"related"},{"name":"Penicillium expansum aspartic proteinase activity","type":"related"},{"name":"Penicillium janthinellum acid proteinase activity","type":"related"},{"name":"Penicillium janthinellum aspartic protease activity","type":"related"},{"name":"Penicillium janthinellum aspartic proteinase activity","type":"related"},{"name":"Penicillium roqueforti acid proteinase activity","type":"related"},{"name":"acid protease A","type":"exact"},{"name":"penicillopepsin activity","type":"exact"},{"name":"peptidase A activity","type":"broad"}],"termid":"GO:0046561"}


id: FYPO:0005956
data:
  {"alleles_by_uniquename":{"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dephosphorylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal protein dephosphorylation","termid":"FYPO:0004426"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03940":null},"genotype_count":1,"genotypes_by_uniquename":{"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abnormal protein dephosphorylation during vegetative growth","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940"],"single_locus_genotype_uniquenames":["nem2delta"],"synonyms":[{"name":"abnormal protein dephosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005956","terms_by_termid":{"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: GO:0035310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell in the larval wing imaginal disc becomes capable of differentiating autonomously into a notum cell, if left in its normal environment.","definition_xrefs":["PMID:10860999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification involved in pattern specification","termid":"GO:0060573"},{"relation_name":"part_of","term_name":"wing and notum subfield formation","termid":"GO:0035309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notum cell fate specification","termid":"GO:0035310"}


id: FYPO:0007885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of Lms2-8 complex binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:33378677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"decreased Lsm2-8 complex binding","synonyms":[{"name":"reduced Lsm2-8 complex binding","type":"exact"}],"termid":"FYPO:0007885"}


id: PBO:0088937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA snoRNP complex subunit Gar1","termid":"PBO:0088937"}


id: PBO:0112693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex polyphosphate synthase subunit Vtc4","termid":"PBO:0112693"}


id: GO:0051504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A branched pathway that produces the precursors to four structurally distinct types of polycyclic diterpenes. The pathway starts with the cyclization of geranylgeranyl diphosphate into ent-copalyl diphosphate and syn-copalyl diphosphate. The catalytic conversion by diterpene cyclases of these two compounds produces the four diterpene hydrocarbons which are precursors to the four structurally distinct classes of diterpene phytoalexins.","definition_xrefs":["MetaCyc:PWY-2981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"part_of","term_name":"diterpene phytoalexin biosynthetic process","termid":"GO:0051502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"diterpene phytoalexin precursor biosynthetic process","synonyms":[{"name":"diterpene phytoalexin precursor anabolism pathway","type":"exact"},{"name":"diterpene phytoalexin precursor formation pathway","type":"exact"},{"name":"diterpene phytoalexin precursor synthesis pathway","type":"exact"}],"termid":"GO:0051504"}


id: MONDO:0018573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intrauterine growth restriction-short stature-early adult-onset diabetes syndrome","secondary_identifiers":["Orphanet:436144","UMLS:C5681180","GARD:21818","MEDGEN:1801791"],"termid":"MONDO:0018573","xrefs":{"Monarch":{"xref_id":"0018573"}}}


id: PBO:0079920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex III subunit VII","termid":"PBO:0079920"}


id: FYPO:0002687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which telomere length is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere morphology during vegetative growth","termid":"FYPO:0006513"},{"relation_name":"is_a","term_name":"normal telomere length","termid":"FYPO:0006515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere length during vegetative growth","synonyms":[{"name":"normal telomere length during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002687"}


id: PBO:0041642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 H","termid":"PBO:0041642"}


id: PBO:0066164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding fox-1 homolog 1","termid":"PBO:0066164"}


id: GO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process associated with progression of the cell from its inception to the end of its lifespan that occurs as the cell continues cycles of growth and division.","definition_xrefs":["PMID:12044934","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete replicative cell aging (obsolete GO:0001302)","synonyms":[{"name":"replicative cell ageing","type":"exact"}],"termid":"GO:0001302"}


id: PBO:0051619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin enhancer binding factor 2 pseudogene 1","termid":"PBO:0051619"}


id: PBO:0068775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 12, pseudogene","termid":"PBO:0068775"}


id: PBO:0074810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 14B","termid":"PBO:0074810"}


id: GO:0016620
data:
  {"annotated_genes":["SJAG_00027","SJAG_00674","SJAG_06622","SJAG_01869","SJAG_00482","SJAG_03903","SJAG_06621","SJAG_00660","SJAG_03828","SJAG_02961","SJAG_00234","SJAG_03786","SJAG_00636","SJAG_03293","SJAG_02945","SJAG_02135","SJAG_00869","SJAG_02235"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003842"},{"annotations":[101186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140087"},{"annotations":[78956,76434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004029"},{"annotations":[92155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051269"},{"annotations":[64638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004073"},{"annotations":[76423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004350"},{"annotations":[109708,109706,80774,75068,72851,109704,109705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004365"},{"annotations":[65077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004043"},{"annotations":[71817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003942"},{"annotations":[77910,76398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004777"},{"annotations":[87784,88764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036243"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00234":null,"SJAG_00482":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00674":null,"SJAG_00869":null,"SJAG_01869":null,"SJAG_02135":null,"SJAG_02235":null,"SJAG_02945":null,"SJAG_02961":null,"SJAG_03293":null,"SJAG_03786":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.2.1.-","Reactome:R-HSA-1222583"],"termid":"GO:0016620","terms_by_termid":{"GO:0003842":null,"GO:0003942":null,"GO:0004029":null,"GO:0004043":null,"GO:0004073":null,"GO:0004350":null,"GO:0004365":null,"GO:0004777":null,"GO:0036243":null,"GO:0051269":null,"GO:0140087":null}}


id: GO:0006142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving pyrimidine nucleobases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"regulation of pyrimidine nucleobase metabolic process","synonyms":[{"name":"regulation of pyrimidine base metabolic process","type":"exact"},{"name":"regulation of pyrimidine base metabolism","type":"exact"}],"termid":"GO:0006142"}


id: GO:0052223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of a specific chemical on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative chemotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052223)","synonyms":[{"name":"negative chemotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative chemotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052223"}


id: GO:0120546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a reducing C-O-C group acts as acceptor.","definition_xrefs":["EC:1.23.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, reducing C-O-C group as acceptor","termid":"GO:0120546"}


id: GO:0051814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism or its progeny spreads from one location to another within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete movement in other organism involved in symbiotic interaction (obsolete GO:0051814)","synonyms":[{"name":"movement in other organism during symbiotic interaction","type":"related"},{"name":"movement within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0051814"}


id: GO:0034836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-hydroxy-2-mercaptobenzothiazole + 1/2 O2 = 6,7-dihydroxy-2-mercaptobenzothiazole.","definition_xrefs":["UM-BBD_reactionID:r1181"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-hydroxy-2-mercaptobenzothiazole monooxygenase activity (obsolete GO:0034836)","termid":"GO:0034836"}


id: MONDO:0011667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monogenic diabetes caused by inactivating mutation(s) in the PDX1 gene, encoding pancreas/duodenum homeobox protein 1. Homozygous PDX1 mutations result in permanent neonatal diabetes.","definition_xrefs":["NCIT:C129746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0005015","MONDO:0004335","MONDO:0019254","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 4","secondary_identifiers":["NANDO:2201072","MESH:C563451","SCTID:609571007","MEDGEN:318863","OMIM:606392","UMLS:C1833382","GARD:10659","DOID:0111103"],"synonyms":[{"name":"MODY insulin promoter factor-1 related","type":"related"},{"name":"MODY type 4","type":"exact"},{"name":"MODY, type 4","type":"related"},{"name":"MODY, type IV","type":"exact"},{"name":"MODY4","type":"exact"},{"name":"PDX1 maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"PDX1-associated monogenic diabetes","type":"exact"},{"name":"diabetes mellitus MODY type 4","type":"related"},{"name":"maturity onset diabetes of the Young, type 4","type":"exact"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in PDX1","type":"exact"},{"name":"maturity-onset diabetes of the young, type 4","type":"related"},{"name":"type 4 maturity-onset diabetes of the young","type":"related"}],"termid":"MONDO:0011667","xrefs":{"Monarch":{"xref_id":"0011667"}}}


id: GO:0003405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth that results in the lengthening of the optic vesicle in the posterior direction.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"optic vesicle morphogenesis","termid":"GO:0003404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic vesicle elongation","termid":"GO:0003405"}


id: PBO:0063358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Purkinje cell protein 4","termid":"PBO:0063358"}


id: MONDO:0500000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by episodes of swelling under the skin (angioedema) and an elevated number of the white blood cells known as eosinophils (eosinophilia). During these episodes, symptoms of hives (urticaria), fever, swelling, weight gain and eosinophilia may occur. Symptoms usually appear every 3-4 weeks and resolve on their own within several days. Other cells may be elevated during the episodes, such as neutrophils and lymphocytes. Although the syndrome is often considered a subtype of the idiopathic hypereosinophilic syndromes, it does not typically have organ involvement or lead to other health concerns.","definition_xrefs":["PMID:25527564","GARD:0013029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"episodic angioedema with eosinophilia","secondary_identifiers":["icd11.foundation:1511563398","MEDGEN:725561","GARD:13029","UMLS:C1304198"],"synonyms":[{"name":"EAE","type":"exact"},{"name":"Gleich syndrome","type":"exact"},{"name":"Gleich's syndrome","type":"exact"}],"termid":"MONDO:0500000","xrefs":{"Monarch":{"xref_id":"0500000"}}}


id: PBO:0063568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase C","termid":"PBO:0063568"}


id: GO:0060935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac fibroblast cell differentiation","termid":"GO:0060935"}


id: GO:0003993
data:
  {"annotated_genes":["SJAG_04067","SJAG_02405","SJAG_01667","SJAG_01970","SJAG_00711"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63155,74820,74968,78815,110547],"is_not":false,"summary":null,"term":"GO:0003993"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum.","definition_xrefs":["EC:3.1.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00711":null,"SJAG_01667":null,"SJAG_01970":null,"SJAG_02405":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"acid phosphatase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ACID-PHOSPHATASE-RXN","Reactome:R-HSA-196950"],"synonyms":[{"name":"acid monophosphatase activity","type":"related"},{"name":"acid nucleoside diphosphate phosphatase activity","type":"related"},{"name":"acid phosphohydrolase activity","type":"related"},{"name":"acid phosphomonoester hydrolase activity","type":"related"},{"name":"acid phosphomonoesterase activity","type":"related"},{"name":"glycerophosphatase activity","type":"broad"},{"name":"orthophosphoric-monoester phosphohydrolase (acid optimum)","type":"related"},{"name":"phosphate-monoester phosphohydrolase (acid optimum)","type":"related"},{"name":"phosphomonoesterase activity","type":"broad"},{"name":"uteroferrin","type":"related"}],"termid":"GO:0003993","terms_by_termid":{"GO:0003993":null}}


id: GO:0002747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Antigen processing and presentation which is initiated by uptake of antigen via phagocytosis.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation following phagocytosis","termid":"GO:0002747"}


id: PBO:0049634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 37","termid":"PBO:0049634"}


id: MONDO:0007956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pai syndrome is an idiopathic developmental disorder characterized by median cleft of the upper lip (MCL), midline polyps of the facial skin and nasal mucosa, and pericallosal lipomas. Hypertelorism with ocular anomalies are also observed, generally with normal neuropsychological development.","definition_xrefs":["Orphanet:1993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontonasal dysplasia","termid":"MONDO:0016643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Pai syndrome","secondary_identifiers":["MESH:C536135","GARD:3439","UMLS:C1835087","OMIM:155145","SCTID:722201004","icd11.foundation:1236130516","MEDGEN:371972"],"synonyms":[{"name":"Pai syndrome","type":"exact"},{"name":"cleft, MEDIAN, of upper LIP with polyps of facial skin and nasal mucosa","type":"related"},{"name":"cleft, Median, of upper lip with polyps of Facial skin and nasal mucosa","type":"related"},{"name":"median cleft of the upper lip-corpus callosum lipoma-cutaneous polyps syndrome","type":"exact"},{"name":"median cleft of upper lip with polyps of facial skin and nasal mucosa","type":"related"}],"termid":"MONDO:0007956","xrefs":{"Monarch":{"xref_id":"0007956"}}}


id: MONDO:0005877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nocardiosis (obsolete MONDO:0005877)","termid":"MONDO:0005877","xrefs":{"Monarch":{"xref_id":"0005877"}}}


id: PBO:0081927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 969, pseudogene","termid":"PBO:0081927"}


id: GO:0086085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex that results in the connection of an SA cardiomyocyte with an atrial cardiomyocyte and contributes to the communication between the two cells.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding involved in heterotypic cell-cell adhesion","termid":"GO:0086080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488","GO:0098631"],"is_obsolete":false,"name":"cell adhesive protein binding involved in SA cardiac muscle cell-atrial cardiac muscle cell communication","synonyms":[{"name":"cell adhesive protein binding involved in SA cardiomyocyte-atrial cardiomyocyte communication","type":"exact"}],"termid":"GO:0086085"}


id: GO:2000804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of termination of RNA polymerase II transcription, poly(A)-coupled.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase II transcription","termid":"GO:1904594"},{"relation_name":"regulates","term_name":"termination of RNA polymerase II transcription, poly(A)-coupled","termid":"GO:0030846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of termination of RNA polymerase II transcription, poly(A)-coupled","synonyms":[{"name":"regulation of termination of RNA polymerase II transcription, polyadenylation-coupled","type":"related"},{"name":"regulation of transcription termination from Pol II promoter, RNA polymerase(A) coupled","type":"related"},{"name":"regulation of transcription termination from Pol II promoter, poly(A) coupled","type":"related"}],"termid":"GO:2000804"}


id: PBO:0016568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs85a (predicted)","termid":"PBO:0016568"}


id: PBO:0002047
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N syndrome","termid":"PBO:0002047"}


id: PBO:0044316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-245 beta chain","termid":"PBO:0044316"}


id: CHEBI:45979
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiabendazole","termid":"CHEBI:45979"}


id: PBO:0005846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, unknown biological role","termid":"PBO:0005846"}


id: GO:0044764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that is carried out at the cellular level which involves another organism of the same or different species.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism cellular process (obsolete GO:0044764)","termid":"GO:0044764"}


id: GO:0140573
data:
  {"annotated_genes":["SJAG_00302"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[119689],"is_not":false,"summary":null,"term":"GO:0140573"}]},"cv_name":"cellular_component","definition":"A complex comprised of DNA wound around a multisubunit core and associated proteins containing the histone H3, which forms the primary packing unit of DNA into higher order structures.","definition_xrefs":["PMID:33155135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleosome","termid":"GO:0000786"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"histone H3-containing nucleosome","references_by_uniquename":{"PMID:24184107":null},"synonyms":[{"name":"histone H3 containing nucleosome","type":"exact"}],"termid":"GO:0140573","terms_by_termid":{"GO:0140573":null}}


id: MONDO:0010213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive genetic disorder caused by mutations in the DDB2 gene. This disease exhibits the mildest degree of sun sensitivity of all xeroderma pigmentosum complementation groups, although individuals are at high risk for skin cancer.","definition_xrefs":["NCIT:C114771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum","termid":"MONDO:0019600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"xeroderma pigmentosum group E","secondary_identifiers":["Orphanet:276261","SCTID:56048001","GARD:5627","DOID:0110846","UMLS:C1848411","MEDGEN:341219","MESH:C564732","OMIM:278740"],"synonyms":[{"name":"XP group E","type":"exact"},{"name":"XP, Group E","type":"related"},{"name":"XP-E","type":"exact"},{"name":"XP5","type":"exact"},{"name":"XPE","type":"exact"},{"name":"XPe","type":"related"},{"name":"xeroderma pigmentosum 5","type":"related"},{"name":"xeroderma pigmentosum V","type":"exact"},{"name":"xeroderma pigmentosum group E","type":"exact"},{"name":"xeroderma pigmentosum group type E","type":"exact"},{"name":"xeroderma pigmentosum, complementation group E","type":"related"},{"name":"xeroderma pigmentosum, complementation group type E","type":"exact"},{"name":"xeroderma pigmentosum, group E, DDB-negative subtype","type":"exact"},{"name":"xeroderma pigmentosum, type 5","type":"related"}],"termid":"MONDO:0010213","xrefs":{"Monarch":{"xref_id":"0010213"}}}


id: MONDO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Penaeus monodon.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete tiger prawn allergy (obsolete MONDO:0000803)","secondary_identifiers":["DOID:0060528"],"synonyms":[{"name":"Penaeus monodon allergic disease","type":"exact"},{"name":"Penaeus monodon allergy","type":"exact"},{"name":"Penaeus monodon caused allergic disease","type":"exact"},{"name":"allergy of Penaeus monodon","type":"exact"}],"termid":"MONDO:0000803","xrefs":{"Monarch":{"xref_id":"0000803"}}}


id: GO:2001173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2B conserved C-terminal lysine ubiquitination.","definition_xrefs":["PMID:17576814"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2B conserved C-terminal lysine ubiquitination (obsolete GO:2001173)","synonyms":[{"name":"regulation of budding yeast H2B K123 ubiquitination","type":"related"},{"name":"regulation of fission yeast H2B K119 ubiquitination","type":"related"},{"name":"regulation of mammalian H2B K120 ubiquitination","type":"related"}],"termid":"GO:2001173"}


id: PBO:0113554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT domain containing methyltransferase, poorly characterised, conflicting annotations between species, implicated in ribosome or centrosome associated processes and gene expression","termid":"PBO:0113554"}


id: PBO:0034740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"greatwall kinase Ppk18","termid":"PBO:0034740"}


id: PBO:0011181
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator","termid":"PBO:0011181"}


id: FYPO:0001373
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[119874,119875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[119845,119853,119846,119857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex","termid":"FYPO:0006867"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal protein localization to medial cortex","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta","pom1delta"],"synonyms":[{"name":"abnormal protein localisation to medial cortex","type":"exact"},{"name":"abnormal protein localization to medial ring","type":"exact"}],"termid":"FYPO:0001373","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: GO:0071608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of macrophage inflammatory protein 1 alpha due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"macrophage inflammatory protein-1 alpha production","synonyms":[{"name":"CCL3 production","type":"exact"},{"name":"MIP-1a production","type":"exact"},{"name":"chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071608"}


id: PR:Q9P6P1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A syntaxin-16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-SNARE affecting a late Golgi compartment protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.05c","secondary_identifiers":["UniProtKB:Q9P6P1"],"synonyms":[{"name":"Spom972h-STX16","type":"exact"},{"name":"syntaxin tlg2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P1"}


id: PBO:0056544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF2L2 pseudogene 1","termid":"PBO:0056544"}


id: PBO:0053890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1170","termid":"PBO:0053890"}


id: MONDO:0006844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nutritional condition produced by a deficiency of magnesium in the diet, characterized by anorexia, nausea, vomiting, lethargy, and weakness. Symptoms are paresthesias, muscle cramps, irritability, decreased attention span, and mental confusion, possibly requiring months to appear. Deficiency of body magnesium can exist even when serum values are normal. In addition, magnesium deficiency may be organ-selective, since certain tissues become deficient before others. (Harrison's Principles of Internal Medicine, 12th ed, p1936)","definition_xrefs":["MESH:D008275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nutritional deficiency disease","termid":"MONDO:0006873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium deficiency","secondary_identifiers":["UMLS:C0024473","ICD10CM:E61.2","SCTID:238118002","EFO:1001029","MEDGEN:44244","MedDRA:10025433"],"termid":"MONDO:0006844","xrefs":{"Monarch":{"xref_id":"0006844"}}}


id: GO:0098791
data:
  {"annotated_genes":["SJAG_01488","SJAG_04770","SJAG_04340","SJAG_03663","SJAG_01025","SJAG_04548","SJAG_01001","SJAG_00669","SJAG_02525","SJAG_02240","SJAG_04398","SJAG_05330","SJAG_03953","SJAG_03347","SJAG_03670","SJAG_04095","SJAG_04819","SJAG_01571","SJAG_03634","SJAG_01276","SJAG_05209","SJAG_04358","SJAG_02177","SJAG_03756","SJAG_01516","SJAG_04739","SJAG_00816","SJAG_03555","SJAG_04338","SJAG_03278","SJAG_00567","SJAG_01945","SJAG_02168","SJAG_01448","SJAG_02912","SJAG_01409","SJAG_00296","SJAG_02902","SJAG_00330","SJAG_01633","SJAG_04112"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76151,96383],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000137"},{"annotations":[77964],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031985"},{"annotations":[79002,98415,71644,76895],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0005797"},{"annotations":[70788,70541,111157,62176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005795"},{"annotations":[71643,76894,96384,79001,99830],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000138"},{"annotations":[70300],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[105269,118351,87844,98209],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"},{"annotations":[78223,99834,75883,104377,80026,99795,77966,78118,74008,76803,72286,103686,102976,74089,71210,75139,79807,79638,80565,118797,78055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005802"},{"annotations":[93567,91076,107679,91556,96062],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032588"}]},"cv_name":"cellular_component","definition":"A compartment that consists of a lumen and an enclosing membrane, and is part of the Golgi apparatus.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle subcompartment","termid":"GO:0031984"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00330":null,"SJAG_00567":null,"SJAG_00669":null,"SJAG_00816":null,"SJAG_01001":null,"SJAG_01025":null,"SJAG_01276":null,"SJAG_01409":null,"SJAG_01448":null,"SJAG_01488":null,"SJAG_01516":null,"SJAG_01571":null,"SJAG_01633":null,"SJAG_01945":null,"SJAG_02168":null,"SJAG_02177":null,"SJAG_02240":null,"SJAG_02525":null,"SJAG_02902":null,"SJAG_02912":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03555":null,"SJAG_03634":null,"SJAG_03663":null,"SJAG_03670":null,"SJAG_03756":null,"SJAG_03953":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04338":null,"SJAG_04340":null,"SJAG_04358":null,"SJAG_04398":null,"SJAG_04548":null,"SJAG_04739":null,"SJAG_04770":null,"SJAG_04819":null,"SJAG_05209":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"Golgi apparatus subcompartment","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi subcompartment","type":"exact"}],"termid":"GO:0098791","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0000138":null,"GO:0005795":null,"GO:0005797":null,"GO:0005802":null,"GO:0031985":null,"GO:0032588":null,"GO:0140497":null}}


id: PBO:0084405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysophosphatidic acid acyltransferase; involved in triacelglyceride homeostasis and lipid droplet formation; localized to lipid droplets and the ER; specificity for oleoyl-CoA","termid":"PBO:0084405"}


id: SO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron that is not the most 3-prime or the most 5-prime in a given transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interior_intron","synonyms":[{"name":"interior intron","type":"exact"}],"termid":"SO:0000191"}


id: GO:0018387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidative deamination of N-terminal peptidyl-cysteine, or peptidyl-serine, to form pyruvic acid with an amide bond between its 1-carboxyl group and the N-terminal residue.","definition_xrefs":["RESID:AA0127"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-amino acid deamination to pyruvic acid (obsolete GO:0018387)","termid":"GO:0018387"}


id: PBO:0030201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_mitotic_cell_cycle_arrest_in_interphase","termid":"PBO:0030201"}


id: GO:0009509
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid containing pigments other than chlorophyll, usually yellow and orange carotenoid pigments.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromoplast","secondary_identifiers":["Wikipedia:Chromoplast"],"termid":"GO:0009509"}


id: MONDO:0015955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A form of epilepsy that is both rare and inborn.","definition_xrefs":["MONDO:patterns/rare_genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete rare genetic epilepsy (obsolete MONDO:0015955)","secondary_identifiers":["Orphanet:183512"],"synonyms":[{"name":"rare genetic epilepsy","type":"exact"}],"termid":"MONDO:0015955","xrefs":{"Monarch":{"xref_id":"0015955"}}}


id: MONDO:0044627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute macular neuroretinopathy","secondary_identifiers":["GARD:22000","MEDGEN:1678428","icd11.foundation:1081365759","Orphanet:488239","UMLS:C5200735"],"synonyms":[{"name":"AMNR","type":"exact"}],"termid":"MONDO:0044627","xrefs":{"Monarch":{"xref_id":"0044627"}}}


id: PATO:0002356
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a physical object that has been constantly realizing some of its functions.","definition_xrefs":["PATOC:RH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active","termid":"PATO:0002354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constitutively active","termid":"PATO:0002356"}


id: MONDO:0054738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Fraser syndrome","termid":"MONDO:0009046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"Fraser syndrome 2","secondary_identifiers":["OMIM:617666","MEDGEN:1624349","UMLS:C4540036","DOID:0111407"],"synonyms":[{"name":"FRASRS2","type":"related"},{"name":"Fraser syndrome 2","type":"exact"}],"termid":"MONDO:0054738","xrefs":{"Monarch":{"xref_id":"0054738"}}}


id: GO:0033476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an indole-3-acetic acid amide conjugate, a form of indoleacetic acid covalently bound to an a sugar or polyol through an ester bond.","definition_xrefs":["GOC:mah","MetaCyc:PWY-1741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indoleacetic acid conjugate biosynthetic process","termid":"GO:0033474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"indoleacetic acid ester conjugate biosynthetic process","synonyms":[{"name":"IAA ester conjugate biosynthetic process","type":"exact"},{"name":"indole acetic acid ester conjugate biosynthesis","type":"exact"},{"name":"indole acetic acid ester conjugate biosynthetic process","type":"exact"},{"name":"indoleacetic acid ester conjugate anabolism","type":"exact"},{"name":"indoleacetic acid ester conjugate biosynthesis","type":"exact"},{"name":"indoleacetic acid ester conjugate formation","type":"exact"},{"name":"indoleacetic acid ester conjugate synthesis","type":"exact"}],"termid":"GO:0033476"}


id: GO:0080104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylthiopropyl-glucosinolate = 5-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-methylthiopropyl glucosinolate S-oxygenase activity","termid":"GO:0080104"}


id: PBO:0071487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 28","termid":"PBO:0071487"}


id: GO:1900738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipase C-activating G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:1900736"},{"relation_name":"positively_regulates","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","synonyms":[{"name":"activation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"activation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"activation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"activation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"activation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"activation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"activation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"activation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"narrow"},{"name":"activation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"positive regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"positive regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"positive regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"positive regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"positive regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"positive regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"positive regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"positive regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"positive regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"up regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"up regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"up regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"up regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"up regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"up regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"up regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"up regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"up regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"up-regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"up-regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"up-regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"up-regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"up-regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"up-regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"up-regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"up-regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"up-regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"upregulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"upregulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"upregulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"upregulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"upregulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"upregulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"upregulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"upregulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"upregulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"}],"termid":"GO:1900738"}


id: GO:0032663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-2 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-2 production","termid":"GO:0032623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-2 production","secondary_identifiers":["GO:1900040","GO:0045076"],"synonyms":[{"name":"regulation of IL-2 production","type":"exact"},{"name":"regulation of interleukin-2 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-2 secretion","type":"narrow"}],"termid":"GO:0032663"}


id: PR:Q9UT53
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC806.06c gene.","definition_xrefs":["UniProtKB:Q9UT53","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide/nicotinic acid mononucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.06c","synonyms":[{"name":"NMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NMN/NaMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NMNAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NaMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NaMNAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC806.06c","type":"exact"},{"name":"nicotinamide-nucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nicotinate-nucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT53"}


id: PBO:0003764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Sme1","termid":"PBO:0003764"}


id: PBO:0089719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxymuconolactone decarboxylase-like protein, Pxp2","termid":"PBO:0089719"}


id: GO:0052358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of glucan molecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont glucan (obsolete GO:0052358)","termid":"GO:0052358"}


id: GO:0060672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a trophoblast cell elongates to contribute to the branching of the placenta.","definition_xrefs":["GOC:tb","GOC:dph","PMID:16916377","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell morphogenesis","termid":"GO:0003382"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"branching involved in labyrinthine layer morphogenesis","termid":"GO:0060670"},{"relation_name":"part_of","term_name":"epithelial cell differentiation involved in embryonic placenta development","termid":"GO:0060671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell morphogenesis involved in placental branching","termid":"GO:0060672"}


id: FYPO:0009049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of methionine than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to methionine","synonyms":[{"name":"resistance to methionine during mitotic cell cycle","type":"related"},{"name":"resistance to methionine during vegetative growth","type":"exact"},{"name":"resistant to methionine","type":"exact"}],"termid":"FYPO:0009049"}


id: GO:1901469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of syringal lignin catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of phenylpropanoid metabolic process","termid":"GO:2000762"},{"relation_name":"regulates","term_name":"syringal lignin catabolic process","termid":"GO:1901065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of syringal lignin catabolic process","synonyms":[{"name":"regulation of S-lignin catabolic process","type":"exact"},{"name":"regulation of syringal lignin breakdown","type":"exact"},{"name":"regulation of syringal lignin catabolism","type":"exact"},{"name":"regulation of syringal lignin degradation","type":"exact"}],"termid":"GO:1901469"}


id: PBO:0084876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; MRP51 exhibits genetic interactions with mutations in the COX2 and COX3 mRNA 5'-untranslated leader sequences","termid":"PBO:0084876"}


id: PBO:0000062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA (predicted)","termid":"PBO:0000062"}


id: PBO:0073983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC24A3 antisense RNA 1","termid":"PBO:0073983"}


id: PBO:0078967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (AGA) 6-1","termid":"PBO:0078967"}


id: PBO:0090093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-bisphosphate 2-phosphatase","termid":"PBO:0090093"}


id: GO:0006053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylmannosamine, the acetylated derivative of mannosamine, 2-amino-2-deoxymannose.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylmannosamine metabolic process","termid":"GO:0006051"},{"relation_name":"is_a","term_name":"mannosamine catabolic process","termid":"GO:0046346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylmannosamine catabolic process","synonyms":[{"name":"N-acetylmannosamine breakdown","type":"exact"},{"name":"N-acetylmannosamine catabolism","type":"exact"},{"name":"N-acetylmannosamine degradation","type":"exact"}],"termid":"GO:0006053"}


id: SO:0001264
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A noncoding RNA that guides the insertion or deletion of uridine residues in mitochondrial mRNAs. This may also refer to synthetic RNAs used to guide DNA editing using the CRIPSR/Cas9 system.","direct_ancestors":[{"relation_name":"has_quality","term_name":"gRNA_encoding","termid":"SO:0000979"},{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gRNA_gene","synonyms":[{"name":"gRNA gene","type":"exact"}],"termid":"SO:0001264"}


id: PBO:0053049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 7, transcriptional regulator","termid":"PBO:0053049"}


id: PBO:0065192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 4","termid":"PBO:0065192"}


id: GO:0018378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The linkage of cytochromes and other heme proteins to heme via heme-L-cysteine.","definition_xrefs":["RESID:AA0135"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c-heme linkage via heme-L-cysteine (obsolete GO:0018378)","synonyms":[{"name":"cytochrome c-haem linkage via haem-L-cysteine","type":"exact"}],"termid":"GO:0018378"}


id: PBO:0051096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 6","termid":"PBO:0051096"}


id: PBO:0038280
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"first_approved_timestamp","termid":"PBO:0038280"}


id: PBO:0045688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 2","termid":"PBO:0045688"}


id: PBO:0055847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat, Ig-like and transmembrane domains 3","termid":"PBO:0055847"}


id: FYPO:0008339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the 3' ends of non-polyadenylated RNA molecules is abolished.","definition_xrefs":["PMID:39333464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"abolished 3' end uridylation of non-polyadenylated RNA","termid":"FYPO:0008339"}


id: GO:0048833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the number of floral organs formed in a floral whorl.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"specification of plant organ number","termid":"GO:0048832"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of floral organ number","termid":"GO:0048833"}


id: GO:1904865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of beta-catenin-TCF complex assembly.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of beta-catenin-TCF complex assembly","termid":"GO:1904863"},{"relation_name":"positively_regulates","term_name":"beta-catenin-TCF complex assembly","termid":"GO:1904837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"positive regulation of beta-catenin-TCF complex assembly","synonyms":[{"name":"activation of beta-catenin-TCF complex assembly","type":"narrow"},{"name":"activation of beta-catenin-TCF complex formation","type":"narrow"},{"name":"activation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"activation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"activation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"activation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"activation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"activation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"positive regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"positive regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"positive regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"positive regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"positive regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"positive regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"positive regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"up regulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"up regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"up regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"up regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"up regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"up regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"up regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"up regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"up-regulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"up-regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"up-regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"up-regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"up-regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"up-regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"up-regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"up-regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"upregulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"upregulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"upregulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"upregulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"upregulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"upregulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"upregulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"upregulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"}],"termid":"GO:1904865"}


id: PBO:0084891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translational activator of the COB mRNA; membrane protein that interacts with translating ribosomes, acts on the COB mRNA 5'-untranslated leader","termid":"PBO:0084891"}


id: PBO:0055098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2516","termid":"PBO:0055098"}


id: GO:0102027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-demethylmenaquinol-8 + S-adenosyl-L-methionine = menaquinol-8 + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity (obsolete GO:0102027)","termid":"GO:0102027"}


id: MONDO:0011039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrophia maculosa varioliformis cutis, familial","secondary_identifiers":["MESH:C563349","OMIM:601341","UMLS:C1832465","MEDGEN:371334"],"synonyms":[{"name":"AMVC","type":"related"},{"name":"atrophia MACULOSA VARIOLIFORMIS cutis, familial","type":"related"},{"name":"atrophia maculosa varioliformis cutis, familial","type":"exact"},{"name":"varioliform macular atrophy of the skin","type":"related"}],"termid":"MONDO:0011039","xrefs":{"Monarch":{"xref_id":"0011039"}}}


id: PBO:0033814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate-specific mitotic metaphase/anaphase APC coactivator Slp1","termid":"PBO:0033814"}


id: GO:0061025
data:
  {"annotated_genes":["SJAG_00810","SJAG_02351","SJAG_01697","SJAG_01379","SJAG_02924","SJAG_00870","SJAG_03403","SJAG_00430","SJAG_01324","SJAG_03670","SJAG_00557","SJAG_02204","SJAG_00380","SJAG_02587","SJAG_03347","SJAG_03552","SJAG_02878","SJAG_03536","SJAG_01467","SJAG_04513","SJAG_02241","SJAG_02595","SJAG_04739","SJAG_02414","SJAG_02315","SJAG_03848","SJAG_04978","SJAG_05184","SJAG_04887","SJAG_00171","SJAG_03889","SJAG_01633","SJAG_00899","SJAG_00826","SJAG_04023","SJAG_00204"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60478,69275,72523,113955],"is_not":false,"summary":null,"term":"GO:0061025"},{"annotations":[78770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016320"},{"annotations":[99835,71594,100037,77472,74930,79963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[96279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[78993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048288"},{"annotations":[78233,92695,95627,110502,96702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032220"},{"annotations":[76014],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[78072,112994,101173,78366,90920,109963,117812,72371,76558,101400,117857,98421,76923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006906"},{"annotations":[76518,78120,74246,57752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"The membrane organization process that joins two lipid bilayers to form a single membrane.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00810":null,"SJAG_00826":null,"SJAG_00870":null,"SJAG_00899":null,"SJAG_01324":null,"SJAG_01379":null,"SJAG_01467":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_02204":null,"SJAG_02241":null,"SJAG_02315":null,"SJAG_02351":null,"SJAG_02414":null,"SJAG_02587":null,"SJAG_02595":null,"SJAG_02878":null,"SJAG_02924":null,"SJAG_03347":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04739":null,"SJAG_04887":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"membrane fusion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Wikipedia:Lipid_bilayer_fusion","GO:0006944","GO:0044801"],"synonyms":[{"name":"cellular membrane fusion","type":"exact"},{"name":"single-organism membrane fusion","type":"related"}],"termid":"GO:0061025","terms_by_termid":{"GO:0006906":null,"GO:0016320":null,"GO:0032220":null,"GO:0034058":null,"GO:0035493":null,"GO:0048210":null,"GO:0048280":null,"GO:0048288":null,"GO:0061025":null}}


id: PBO:0081057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 14","termid":"PBO:0081057"}


id: PBO:0058496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5690","termid":"PBO:0058496"}


id: GO:0019152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoin + NAD+ = diacetyl + NADH + H+. This reaction is catalyzed in the reverse direction.","definition_xrefs":["MetaCyc:ACETOINDEHYDROG-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetoin dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R02343"],"synonyms":[{"name":"diacetyl reductase activity","type":"exact"}],"termid":"GO:0019152"}


id: MONDO:0001296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of night blindness that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"night blindness","termid":"MONDO:0004588"},{"relation_name":"is_a","term_name":"nutritional deficiency disease","termid":"MONDO:0006873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acquired night blindness","secondary_identifiers":["UMLS:C0152202","ICD9:368.62","ICD10CM:H53.62","DOID:11491","MEDGEN:508926","icd11.foundation:1609326234","SCTID:53808001"],"synonyms":[{"name":"acquired night blindness","type":"exact"}],"termid":"MONDO:0001296","xrefs":{"Monarch":{"xref_id":"0001296"}}}


id: PBO:0043866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crumbs cell polarity complex component 3 pseudogene 1","termid":"PBO:0043866"}


id: MONDO:0018830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kimura disease is a benign and chronic inflammatory disorder of unknown etiology, occurring mainly in Asian countries (very rarely in Western countries) and predominantly affecting young men, that usually presents with a solitary or multiple non-tender subcutaneous masses in the head and neck region (in particular the preauricular and submandibular area) and/or generalized painless lymphadenopathy, often with salivary gland involvement. Characteristic laboratory findings include blood eosinophilia and markedly elevated serum immunoglobulin E (IgE) levels. It is often associated with autoinflammatory disorders (i.e. ulcerative colitis, bronchial asthma) and a co-existing renal disease.","definition_xrefs":["Orphanet:482"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"lymphadenitis","termid":"MONDO:0002052"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Kimura disease","secondary_identifiers":["MedDRA:10048640","GARD:6835","DOID:7365","MESH:D000796","NCIT:C26867","UMLS:C0033838","MESH:D000082242","MEDGEN:46183","EFO:1000722","icd11.foundation:1229046951","Wikipedia:Kimura's_disease"],"synonyms":[{"name":"Kimura's disease","type":"exact"},{"name":"angiolymphoid hyperplasia with eosinophilia","type":"related"},{"name":"eosinophilic granuloma of soft tissue","type":"related"},{"name":"eosinophilic hyperplastic lymphogranuloma","type":"related"},{"name":"eosinophilic lymphofollicular granuloma","type":"related"},{"name":"eosinophilic lymphofolliculosis","type":"related"},{"name":"eosinophilic lymphogranuloma","type":"exact"}],"termid":"MONDO:0018830","xrefs":{"Monarch":{"xref_id":"0018830"}}}


id: PBO:0028402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_respiratory_electron_transport","termid":"PBO:0028402"}


id: GO:0072452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of G2/M transition size control checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell size control checkpoint signaling","termid":"GO:0072470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to G2 transition size control checkpoint signaling","synonyms":[{"name":"G2/M transition size control checkpoint effector process","type":"exact"},{"name":"response to G2/M transition size control checkpoint signaling","type":"exact"},{"name":"response to mitotic cell cycle G2/M transition size control checkpoint signaling","type":"exact"},{"name":"response to signal involved in G2/M transition size control checkpoint","type":"exact"}],"termid":"GO:0072452"}


id: MONDO:0015624
data:
  {"annotated_genes":["SJAG_03266","SJAG_04334","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86845,86844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[87173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital isolated hyperinsulinism","termid":"MONDO:0019010"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03266":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0004335"],"is_obsolete":false,"name":"diazoxide-sensitive diffuse hyperinsulinism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20067","Orphanet:165985","UMLS:C5679570","MEDGEN:1842739"],"synonyms":[{"name":"hyperinsulinemic hypoglycemia, diazoxide-sensitive diffuse form","type":"exact"}],"termid":"MONDO:0015624","terms_by_termid":{"MONDO:0011236":null,"MONDO:0011717":null},"xrefs":{"Monarch":{"xref_id":"0015624"}}}


id: PR:Q09888
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug160 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 160 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.14","synonyms":[{"name":"Spom972h-mug160","type":"exact"}],"termid":"PR:Q09888"}


id: GO:0047653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-(+)-allantoin = (R)-(-)-allantoin.","definition_xrefs":["EC:5.1.99.3","RHEA:10804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"allantoin racemase activity","secondary_identifiers":["KEGG_REACTION:R03925","MetaCyc:ALLANTOIN-RACEMASE-RXN"],"termid":"GO:0047653"}


id: PBO:0044796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 9, pseudogene","termid":"PBO:0044796"}


id: MONDO:0971173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammation with arthritis and vasculitis","secondary_identifiers":["OMIM:620880","MEDGEN:1855512","UMLS:C5935634"],"termid":"MONDO:0971173","xrefs":{"Monarch":{"xref_id":"0971173"}}}


id: MONDO:0001316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious meningitis caused by infection with Streptococcus.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial meningitis","termid":"MONDO:0006670"},{"relation_name":"is_a","term_name":"streptococcal infection","termid":"MONDO:0021680"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"streptococcal meningitis","secondary_identifiers":["UMLS:C0154639","ICD9:320.2","MEDGEN:509616","DOID:11574","ICD10CM:G00.2","SCTID:4510004"],"synonyms":[{"name":"Streptococcus caused infectious meningitis","type":"exact"},{"name":"Streptococcus infectious meningitis","type":"exact"}],"termid":"MONDO:0001316","xrefs":{"Monarch":{"xref_id":"0001316"}}}


id: PBO:0031182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_acid_phosphatase_activity","termid":"PBO:0031182"}


id: PBO:0027260
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-S10_phosphorylation","termid":"PBO:0027260"}


id: GO:0032393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"MHC class I receptor activity","synonyms":[{"name":"T cell receptor activity","type":"related"},{"name":"alpha-beta T cell receptor activity","type":"related"},{"name":"gamma-delta T cell receptor activity","type":"related"}],"termid":"GO:0032393"}


id: GO:0072508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of trivalent cations within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete trivalent inorganic cation homeostasis (obsolete GO:0072508)","termid":"GO:0072508"}


id: PBO:0003631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 protease Nep2","termid":"PBO:0003631"}


id: PBO:0053743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 970","termid":"PBO:0053743"}


id: PBO:0076886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 37","termid":"PBO:0076886"}


id: MONDO:0042370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Yersinia infectious disease","termid":"MONDO:0007023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yersinia enterocolitica infectious disease","secondary_identifiers":["EFO:0009424","SCTID:80960004"],"synonyms":[{"name":"infection by Yersinia enterocolitica","type":"exact"},{"name":"infection caused by Yersinia enterocolitica","type":"related"}],"termid":"MONDO:0042370","xrefs":{"Monarch":{"xref_id":"0042370"}}}


id: GO:0001937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell proliferation","termid":"GO:0001936"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"negatively_regulates","term_name":"endothelial cell proliferation","termid":"GO:0001935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell proliferation","synonyms":[{"name":"down regulation of endothelial cell proliferation","type":"exact"},{"name":"down-regulation of endothelial cell proliferation","type":"exact"},{"name":"downregulation of endothelial cell proliferation","type":"exact"},{"name":"inhibition of endothelial cell proliferation","type":"narrow"}],"termid":"GO:0001937"}


id: GO:0005469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: succinate(out) + fumarate(in) = succinate(in) + fumarate(out).","definition_xrefs":["TC:2.A.29.13.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fumarate transmembrane transporter activity","termid":"GO:0015138"},{"relation_name":"is_a","term_name":"succinate transmembrane transporter activity","termid":"GO:0015141"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"succinate:fumarate antiporter activity","secondary_identifiers":["RHEA:29323"],"termid":"GO:0005469"}


id: PBO:0046969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member F","termid":"PBO:0046969"}


id: PBO:0054631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2036","termid":"PBO:0054631"}


id: PR:Q09904
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup124 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup124 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.04c","synonyms":[{"name":"Spom972h-nup124","type":"exact"},{"name":"nuclear pore protein nup124 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09904"}


id: MONDO:0021578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the sternum.","definition_xrefs":["NCIT:C6730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sternal neoplasm","secondary_identifiers":["SCTID:126559003","UMLS:C1290244","MEDGEN:226935","ICD9:239.2"],"synonyms":[{"name":"neoplasm of sternum","type":"exact"},{"name":"neoplasm of sternum (disease)","type":"exact"},{"name":"neoplasm of sternum (disorder)","type":"exact"},{"name":"neoplasm of the sternum","type":"exact"},{"name":"sternal neoplasm","type":"exact"},{"name":"sternal tumor","type":"exact"},{"name":"sternal tumour","type":"exact"},{"name":"sternum neoplasm","type":"exact"},{"name":"sternum neoplasm (disease)","type":"exact"},{"name":"sternum tumor","type":"exact"},{"name":"sternum tumour","type":"exact"},{"name":"tumor of sternum","type":"exact"},{"name":"tumor of the sternum","type":"exact"},{"name":"tumour of sternum","type":"exact"},{"name":"tumour of the sternum","type":"exact"}],"termid":"MONDO:0021578","xrefs":{"Monarch":{"xref_id":"0021578"}}}


id: PBO:0040611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAIAP2 divergent transcript","termid":"PBO:0040611"}


id: PBO:0043902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich secretory protein 2","termid":"PBO:0043902"}


id: GO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:12956429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte homeostasis","termid":"GO:0002260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell homeostasis","synonyms":[{"name":"B lymphocyte homeostasis","type":"exact"},{"name":"B-cell homeostasis","type":"exact"},{"name":"B-lymphocyte homeostasis","type":"exact"}],"termid":"GO:0001782"}


id: MOD:01227
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to an L-fluorophenylalanine.","definition_xrefs":["OMSSA:46","DeltaMass:181","PubMed:8069568","Unimod:127#F"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"},{"relation_name":"is_a","term_name":"halogenated phenylalanine","termid":"MOD:01066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monofluorinated L-phenylalanine","synonyms":[{"name":"Fluoro","type":"related"},{"name":"fluorophenylalanine replacement of phenylalanine","type":"related"},{"name":"phef","type":"exact"}],"termid":"MOD:01227"}


id: GO:1905637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial mRNA catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:27122350","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial RNA catabolic process","termid":"GO:0000960"},{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"},{"relation_name":"regulates","term_name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"regulation of mitochondrial mRNA catabolic process","termid":"GO:1905637"}


id: SO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type VIa beta turn with the following phi and psi sngles on amino acid residues 2 and 3: phi-2 = -120 degrees, psi-2 = 120 degrees, phi-3 = -60 degrees, psi-3 = 0 degrees.","definition_xrefs":["PMID:27428516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn_type_six_a","termid":"SO:0001151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_type_six_a_two","synonyms":[{"name":"beta turn type six a two","type":"exact"},{"name":"type VIa2 beta turn","type":"exact"},{"name":"type VIa2 turn","type":"exact"}],"termid":"SO:0001153"}


id: FYPO:0002785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which riboflavin binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal riboflavin binding","termid":"FYPO:0002388"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished riboflavin binding","synonyms":[{"name":"riboflavin binding abolished","type":"exact"}],"termid":"FYPO:0002785"}


id: PBO:0002670
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.2","termid":"PBO:0002670"}


id: PBO:0055769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA PDCD5 and p53 scaffold","termid":"PBO:0055769"}


id: PBO:0003644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-glucan synthase Mok12","termid":"PBO:0003644"}


id: PBO:0017987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Haemolysin-III family plasma membrane receptor implicated in zinc ion homeostasis Izh2 (predicted)","termid":"PBO:0017987"}


id: GO:0022020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of medial ganglionic eminence cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medial ganglionic eminence cell proliferation","termid":"GO:0022020"}


id: FYECO:0000228
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A temperature at which a conditional (heat- or cold-sensitive) allele can grow, but does not grow at a normal rate.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-permissive temperature","synonyms":[{"name":"semipermissive temperature","type":"exact"}],"termid":"FYECO:0000228"}


id: PBO:0075043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-6","termid":"PBO:0075043"}


id: PBO:0116992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR55 antisense RNA 1","termid":"PBO:0116992"}


id: MONDO:0002679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ischemic condition of the brain, producing a persistent focal neurological deficit in the area of distribution of the cerebral arteries.","definition_xrefs":["NCIT:C50486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain infarction","termid":"MONDO:0005394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral infarction","secondary_identifiers":["ICD9:433.81","MESH:D002544","MEDGEN:3321","SCTID:432504007","ICD9:433.31","SCTID:20059004","ICD9:433.01","ICD9:433.21","UMLS:C0007785","ICD9:434.91","DOID:3526"],"synonyms":[{"name":"CVA - cerebral infarction","type":"exact"},{"name":"brain infarction of telencephalon","type":"exact"},{"name":"cerebral infarct","type":"exact"},{"name":"cerebral infarction","type":"exact"},{"name":"cerebral ischemia","type":"exact"},{"name":"cerebral, infarction","type":"exact"},{"name":"infarction, cerebral","type":"exact"},{"name":"telencephalon brain infarction","type":"exact"}],"termid":"MONDO:0002679","xrefs":{"Monarch":{"xref_id":"0002679"}}}


id: PBO:0063785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 10 pseudogene 1","termid":"PBO:0063785"}


id: MONDO:1012251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital lethal spasms, non-human animal","termid":"MONDO:1011630"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital lethal spasms, cattle","secondary_identifiers":["OMIA:000927-9913"],"termid":"MONDO:1012251","xrefs":{"Monarch":{"xref_id":"1012251"}}}


id: GO:0100048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates phosphatidylcholine biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylcholine biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100048)","termid":"GO:0100048"}


id: FYPO:0003917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the degradation of messenger RNA (mRNA) molecules that contain nonsense mutations is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA catabolic process during vegetative growth","termid":"FYPO:0002137"},{"relation_name":"is_a","term_name":"abnormal nonsense-mediated decay","termid":"FYPO:0003916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0000294","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased nonsense-mediated decay","synonyms":[{"name":"decreased NMD","type":"exact"},{"name":"decreased nonsense-mediated decay during mitotic cell cycle","type":"related"},{"name":"decreased nonsense-mediated decay during vegetative growth","type":"exact"},{"name":"decreased nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","type":"exact"},{"name":"reduced nonsense-mediated decay","type":"exact"}],"termid":"FYPO:0003917"}


id: PBO:0065822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5C antisense RNA 1","termid":"PBO:0065822"}


id: PBO:0063026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 6","termid":"PBO:0063026"}


id: GO:0034670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of arachidonic acid.","definition_xrefs":["GOC:go_curators","PMID:18202452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to arachidonate","synonyms":[{"name":"chemotaxis to arachidonic acid","type":"exact"}],"termid":"GO:0034670"}


id: MOD:01301
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to 2-amino-3-(methylamino)butanoic acid.","definition_xrefs":["Unimod:337#T","PubMed:11743741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylamine Michael addition derivatized residue","termid":"MOD:00643"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylamine Michael addition derivatized threonine","synonyms":[{"name":"Methylamine","type":"related"},{"name":"Michael addition with methylamine","type":"related"}],"termid":"MOD:01301"}


id: PBO:0005132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rix1 (predicted)","termid":"PBO:0005132"}


id: GO:0075255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes leading to the formation of a thick-walled resting or over-wintering spore produced by the rust fungi (Uredinales) and smut fungi (Ustilaginales) in which karyogamy occurs.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"teliospore formation","termid":"GO:0075255"}


id: PBO:0064991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photoreceptor disc component","termid":"PBO:0064991"}


id: GO:0140199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an adenylate cyclase-activating adrenergic receptor signaling pathway involved in some heart process.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway","termid":"GO:0071878"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process","termid":"GO:0086023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process","termid":"GO:0140199"}


id: MONDO:0007411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant cutis laxa in which the cause of the disease is a mutation in the ELN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cutis laxa","termid":"MONDO:0019571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"cutis laxa, autosomal dominant 1","secondary_identifiers":["OMIM:123700","UMLS:C3276539","GARD:15055","MEDGEN:478169","DOID:0070130"],"synonyms":[{"name":"ADCL1","type":"exact"},{"name":"ELN autosomal dominant cutis laxa","type":"exact"},{"name":"autosomal dominant cutis laxa 1","type":"related"},{"name":"autosomal dominant cutis laxa caused by mutation in ELN","type":"exact"},{"name":"cutis laxa, autosomal dominant","type":"broad"},{"name":"cutis laxa, autosomal dominant 1","type":"exact"},{"name":"cutis laxa, autosomal dominant type 1","type":"exact"}],"termid":"MONDO:0007411","xrefs":{"Monarch":{"xref_id":"0007411"}}}


id: MONDO:0005128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease involving the sensory system.","gene_count":0,"genotype_count":0,"name":"obsolete sensory system disease (obsolete MONDO:0005128)","secondary_identifiers":["DOID:0050155"],"synonyms":[{"name":"disease of sensory system","type":"exact"},{"name":"disease or disorder of sensory system","type":"exact"},{"name":"disorder of sensory system","type":"exact"},{"name":"sensory disease","type":"exact"},{"name":"sensory system disease","type":"exact"},{"name":"sensory system disease or disorder","type":"exact"}],"termid":"MONDO:0005128","xrefs":{"Monarch":{"xref_id":"0005128"}}}


id: SO:1000046
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal inversion that includes the centromere.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"pericentric","termid":"SO:0001518"},{"relation_name":"is_a","term_name":"chromosomal_inversion","termid":"SO:1000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericentric_inversion","synonyms":[{"name":"pericentric inversion","type":"exact"}],"termid":"SO:1000046"}


id: GO:1904792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of shelterin complex assembly.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:24270157","GOC:BHF_telomere","GO_REF:0000058","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of shelterin complex assembly","termid":"GO:1904790"},{"relation_name":"positively_regulates","term_name":"shelterin complex assembly","termid":"GO:0071573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"positive regulation of shelterin complex assembly","synonyms":[{"name":"activation of Pot1 complex assembly","type":"narrow"},{"name":"activation of Pot1-Tpz1 complex assembly","type":"narrow"},{"name":"activation of shelterin complex formation","type":"narrow"},{"name":"activation of telosome assembly","type":"narrow"},{"name":"positive regulation of Pot1 complex assembly","type":"exact"},{"name":"positive regulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"positive regulation of shelterin complex formation","type":"exact"},{"name":"positive regulation of telosome assembly","type":"exact"},{"name":"up regulation of Pot1 complex assembly","type":"exact"},{"name":"up regulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"up regulation of shelterin complex formation","type":"exact"},{"name":"up regulation of telosome assembly","type":"exact"},{"name":"up-regulation of Pot1 complex assembly","type":"exact"},{"name":"up-regulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"up-regulation of shelterin complex formation","type":"exact"},{"name":"up-regulation of telosome assembly","type":"exact"},{"name":"upregulation of Pot1 complex assembly","type":"exact"},{"name":"upregulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"upregulation of shelterin complex formation","type":"exact"},{"name":"upregulation of telosome assembly","type":"exact"}],"termid":"GO:1904792"}


id: SO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by DNA methylation.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_DNA_methylation","termid":"SO:0000895"},{"relation_name":"is_a","term_name":"gene_silenced_by_DNA_modification","termid":"SO:0000128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_DNA_methylation","synonyms":[{"name":"gene silenced by DNA methylation","type":"exact"},{"name":"methylation-silenced gene","type":"exact"}],"termid":"SO:0000129"}


id: PBO:0079906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase core protein 1","termid":"PBO:0079906"}


id: MONDO:0034673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ectrodactyly with and without other manifestations (obsolete MONDO:0034673)","termid":"MONDO:0034673","xrefs":{"Monarch":{"xref_id":"0034673"}}}


id: GO:0003333
data:
  {"annotated_genes":["SJAG_01998","SJAG_04903","SJAG_02947","SJAG_02062","SJAG_02941","SJAG_01770","SJAG_02716","SJAG_03591","SJAG_02946","SJAG_02605","SJAG_05346","SJAG_00877","SJAG_01336","SJAG_00626","SJAG_02955","SJAG_02133","SJAG_01923","SJAG_00019","SJAG_02029","SJAG_04984","SJAG_03400","SJAG_04588","SJAG_05342","SJAG_04983","SJAG_03899","SJAG_01096","SJAG_02150","SJAG_01994","SJAG_02113","SJAG_04296","SJAG_04637","SJAG_03256","SJAG_00991","SJAG_04135","SJAG_00543","SJAG_06598","SJAG_00051","SJAG_01636","SJAG_00149","SJAG_04957","SJAG_04715","SJAG_00522","SJAG_03970","SJAG_00015","SJAG_04725","SJAG_03829","SJAG_04295","SJAG_03827","SJAG_04718","SJAG_04787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73563,75701,75871,76541,77171,77185,78018,78195,79041,80280,80563,80727,90046,96032,98547,100347,103840,118554,118555,118556,118557,118558,118559,118560,118561],"is_not":false,"summary":null,"term":"GO:0003333"},{"annotations":[77391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032974"},{"annotations":[103113,110332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"},{"annotations":[90736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[94931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[104338,104339,97666,104337,104340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990822"},{"annotations":[63673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[70289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904983"},{"annotations":[103114,110333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903714"},{"annotations":[96357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902475"},{"annotations":[100679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[97681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[104145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[63576,99147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[96889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070778"},{"annotations":[104147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[96890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"},{"annotations":[97682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[104148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[100680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[104149,103115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[97683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[110334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[104151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[104152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[108215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"},{"annotations":[88432],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[92082,110848,99202,93676],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[92083,93677,99203],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[93678],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[100673,101533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905647"},{"annotations":[90958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140300"}]},"cv_name":"biological_process","definition":"The process in which an amino acid is transported across a membrane.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"transmembrane 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acid transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"amino acid membrane transport","type":"exact"}],"termid":"GO:0003333","terms_by_termid":{"GO:0003333":null,"GO:0015813":null,"GO:0032974":null,"GO:0034488":null,"GO:0034490":null,"GO:0070778":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0097638":null,"GO:0097639":null,"GO:0140300":null,"GO:1901482":null,"GO:1902475":null,"GO:1903712":null,"GO:1903714":null,"GO:1903826":null,"GO:1904983":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905647":null,"GO:1990575":null,"GO:1990591":null,"GO:1990818":null,"GO:1990822":null}}


id: GO:2000125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of octopamine or tyramine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"octopamine or tyramine signaling pathway","termid":"GO:0007211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of octopamine or tyramine signaling pathway","synonyms":[{"name":"regulation of octopamine or tyramine signalling pathway","type":"exact"},{"name":"regulation of octopamine/tyramine signaling pathway","type":"exact"}],"termid":"GO:2000125"}


id: MONDO:0016835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"14q11.2 microduplication syndrome is a rare chromosomal anomaly characterized by developmental delay, mild to severe intellectual disability with speech impairment and epilepsy. Additionally, it may include dysmorphic features (such as hypo- or hypertelorism, dysplastic ears, short palpebral fissures), microcephaly or macrocephaly, behavioral abnormalities, stereotyped hand movements, ataxia, hypotonia, cleft palate.","definition_xrefs":["Orphanet:261229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 14","termid":"MONDO:0016964"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14q11.2 microduplication syndrome","secondary_identifiers":["UMLS:C4749855","GARD:20773","MEDGEN:1657429"],"synonyms":[{"name":"dup(14)(q11.2)","type":"exact"},{"name":"trisomy 14q11.2","type":"exact"}],"termid":"MONDO:0016835","xrefs":{"Monarch":{"xref_id":"0016835"}}}


id: PR:Q9P7H0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H/ACA ribonucleoprotein complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01976","PRO:DNx","PANTHER:PTHR23105:SF12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H/ACA ribonucleoprotein complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.10c","secondary_identifiers":["UniProtKB:Q9P7H0"],"synonyms":[{"name":"H/ACA snoRNP protein NHP2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"P17-nhp2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NHP2","type":"exact"},{"name":"high mobility group-like nuclear protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7H0"}


id: PBO:0050865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of DNA binding 2B (pseudogene)","termid":"PBO:0050865"}


id: GO:0106225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The 2-hydroxyisobutyrylation of a lysine residue in a protein.","definition_xrefs":["GOC:sp","PMID:29775581"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine 2-hydroxyisobutyrylation (obsolete GO:0106225)","termid":"GO:0106225"}


id: PBO:0045404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 6","termid":"PBO:0045404"}


id: MONDO:0007403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inherited or familial Creutzfeldt-Jakob disease (fCJD) is a very rare form of genetic prion disease characterized by typical CJD features (rapidly progressive dementia, personality/behavioral changes, psychiatric disorders, myoclonus, and ataxia) with a genetic cause and sometimes a family history of dementia.","definition_xrefs":["Orphanet:282166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Creutzfeldt Jacob disease","termid":"MONDO:0005357"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"inherited Creutzfeldt-Jakob disease","secondary_identifiers":["icd11.foundation:607607042","NANDO:1200189","MEDGEN:155837","UMLS:C0751254","SCTID:715807002","OMIM:123400","GARD:17307"],"synonyms":[{"name":"CJD","type":"related"},{"name":"Creutzfeldt-Jakob disease","type":"related"},{"name":"Creutzfeldt-Jakob disease, Heidenhain variant","type":"related"},{"name":"Creutzfeldt-Jakob disease, familial","type":"related"},{"name":"Creutzfeldt-Jakob disease, sporadic","type":"related"},{"name":"Creutzfeldt-Jakob disease, variant","type":"related"},{"name":"Creutzfeldt-Jakob disease, variant, resistance to","type":"exact"},{"name":"hereditary Creutzfeldt Jacob disease","type":"exact"},{"name":"inherited CJD","type":"exact"}],"termid":"MONDO:0007403","xrefs":{"Monarch":{"xref_id":"0007403"}}}


id: PBO:0088938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic threonine-tRNA ligase Trs1","termid":"PBO:0088938"}


id: MONDO:0018290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with cardiac malformation as a major feature (obsolete MONDO:0018290)","secondary_identifiers":["Orphanet:371183"],"synonyms":[{"name":"CDG with cardiac malformation as a major feature","type":"exact"}],"termid":"MONDO:0018290","xrefs":{"Monarch":{"xref_id":"0018290"}}}


id: PBO:0073293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 15","termid":"PBO:0073293"}


id: PBO:0030362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_oxygen","termid":"PBO:0030362"}


id: PBO:0071495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 36","termid":"PBO:0071495"}


id: PBO:0049702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"highly accelerated region 1B","termid":"PBO:0049702"}


id: GO:0043601
data:
  {"annotated_genes":["SJAG_01698","SJAG_00814","SJAG_02182","SJAG_05197","SJAG_00729","SJAG_03780","SJAG_02818","SJAG_00272","SJAG_03855","SJAG_03722","SJAG_04877","SJAG_04150","SJAG_02172","SJAG_02627","SJAG_04994","SJAG_05239","SJAG_00863","SJAG_01010"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112816],"is_not":false,"summary":null,"term":"GO:0043601"},{"annotations":[73205,75648,70764,75355],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005658"},{"annotations":[103137,71378,77247,75380],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043625"},{"annotations":[80639,77499,116549],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005662"},{"annotations":[72943,113131,78035,76770,77508,69177],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043599"}]},"cv_name":"cellular_component","definition":"A multi-component enzymatic machine at the nuclear replication fork, which mediates DNA replication. Includes DNA primase, one or more DNA polymerases, DNA helicases, and other proteins.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replisome","termid":"GO:0030894"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear replication fork","termid":"GO:0043596"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01698":null,"SJAG_02172":null,"SJAG_02182":null,"SJAG_02627":null,"SJAG_02818":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_04150":null,"SJAG_04877":null,"SJAG_04994":null,"SJAG_05197":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear replisome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043601","terms_by_termid":{"GO:0005658":null,"GO:0005662":null,"GO:0043599":null,"GO:0043601":null,"GO:0043625":null}}


id: PBO:0063886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIGO antisense RNA 1","termid":"PBO:0063886"}


id: PBO:0082013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger containing ubiquitin peptidase 1","termid":"PBO:0082013"}


id: FYPO:0007516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which DNA occupies a smaller portion of the total nuclear volume than normal. The nuclear volume itself may be normal.","definition_xrefs":["PMID:33153481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal nucleus","termid":"FYPO:0002403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased DNA volume","synonyms":[{"name":"decreased DNA volume during mitotic cell cycle","type":"related"},{"name":"decreased DNA volume during vegetative growth","type":"exact"},{"name":"reduced DNA volume","type":"exact"}],"termid":"FYPO:0007516"}


id: MONDO:0032936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, congenital, with respiratory insufficiency and bone fractures","secondary_identifiers":["MEDGEN:1718097","UMLS:C5394189","DOID:0081343","OMIM:618822"],"synonyms":[{"name":"MYOPATHY, CONGENITAL, WITH RESPIRATORY INSUFFICIENCY AND BONE FRACTURES","type":"related"},{"name":"MYORIBF","type":"related"}],"termid":"MONDO:0032936","xrefs":{"Monarch":{"xref_id":"0032936"}}}


id: GO:0021810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Signaling by neurotransmitters and their receptors that results in the initiation of movement of cells as a component of the process of glial-mediated radial migration.","definition_xrefs":["PMID:12626695","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter signaling initiating cell movement, involved in cerebral cortex radial glia guided migration (obsolete GO:0021810)","synonyms":[{"name":"neurotransmitter signalling initiating cell movement, involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021810"}


id: FYPO:0004860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in the cell wall is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased beta-glucan level","termid":"FYPO:0001194"},{"relation_name":"is_a","term_name":"increased cell wall polysaccharide level","termid":"FYPO:0004859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002946","FYPO:0001985"],"is_obsolete":false,"name":"increased cell wall beta-glucan level","synonyms":[{"name":"increased cell wall beta-D-glucan level","type":"exact"},{"name":"increased cell wall beta-glucan accumulation","type":"related"},{"name":"increased cell wall beta-glucan level during mitotic cell cycle","type":"related"},{"name":"increased cell wall beta-glucan level during vegetative growth","type":"exact"}],"termid":"FYPO:0004860"}


id: PBO:0078969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon CGA) 1-1","termid":"PBO:0078969"}


id: FYPO:0006618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during a cellular response to bleomycin.","definition_xrefs":["PMID:22064477","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased number of Rad52 foci during cellular response to bleomycin","synonyms":[{"name":"increased number of Rad22 foci during cellular response to bleomycin","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to DNA damage","type":"related"},{"name":"increased number of Rad52 foci during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci during cellular response to bleomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0006618"}


id: MONDO:0009662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucopolysaccharidosis type VII (MPS VII) is a very rare lysosomal storage disease belonging to the group of mucopolysaccharidoses.","definition_xrefs":["Orphanet:584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis","termid":"MONDO:0019249"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0037792"],"is_obsolete":false,"name":"mucopolysaccharidosis type 7","secondary_identifiers":["icd11.foundation:1563668250","NCIT:C84903","MEDGEN:43108","NANDO:1200111","SCTID:43916004","DOID:12803","UMLS:C0085132","GARD:7096","OMIM:253220","MESH:D016538","NANDO:2200552","NORD:1722","MedDRA:10056893"],"synonyms":[{"name":"Beta-glucuronidase deficiency","type":"exact"},{"name":"Gus deficiency","type":"related"},{"name":"Gusb deficiency","type":"related"},{"name":"MPS 7","type":"related"},{"name":"MPS VII","type":"related"},{"name":"MPS VII - Sly syndrome","type":"exact"},{"name":"MPS VII - mucopolysaccharidosis VII","type":"related"},{"name":"MPS7","type":"exact"},{"name":"MPSVII","type":"exact"},{"name":"Mucopolysaccharidosis Type VII","type":"exact"},{"name":"Sly disease","type":"exact"},{"name":"Sly syndrome","type":"exact"},{"name":"beta-glucuronidase deficiency","type":"exact"},{"name":"deficiency of beta-glucuronidase","type":"exact"},{"name":"gusb deficiency","type":"related"},{"name":"mucopolysaccharidosis VII","type":"exact"},{"name":"mucopolysaccharidosis type 7","type":"exact"},{"name":"mucopolysaccharidosis type VII","type":"exact"},{"name":"mucopolysaccharidosis, mps-VII","type":"exact"},{"name":"mucopolysaccharidosis, type 7","type":"related"},{"name":"mucopolysaccharidosis, type VII","type":"related"}],"termid":"MONDO:0009662","xrefs":{"Monarch":{"xref_id":"0009662"}}}


id: FYPO:0005131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a lower extent than wild type following exposure to ethanol.","definition_xrefs":["PMID:24623719","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"spores sensitive to ethanol","termid":"FYPO:0005131"}


id: GO:2001275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glucose import in response to insulin stimulus.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glucose import in response to insulin stimulus (obsolete GO:2001275)","synonyms":[{"name":"positive regulation of cellular glucose import in response to insulin stimulus","type":"exact"}],"termid":"GO:2001275"}


id: GO:0008503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with benzodiazepines, a class of drugs with hypnotic, anxiolytic, anticonvulsive, amnestic and myorelaxant properties, to initiate a change in cell activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"benzodiazepine receptor activity","termid":"GO:0008503"}


id: GO:0052929
data:
  {"annotated_genes":["SJAG_02288","SJAG_01704"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70626,75286],"is_not":false,"summary":null,"term":"GO:0052929"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a tRNA with a 3' CC end + ATP = a tRNA with a 3' CCA end + diphosphate.","definition_xrefs":["PMID:31936900","PMID:33095240","RHEA:60012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01704":null,"SJAG_02288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0016740","GO:0140098","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R09386"],"synonyms":[{"name":"ATP:3'-CC-tRNA adenylyltransferase activity","type":"exact"},{"name":"ATP:tRNA adenylyltransferase activity","type":"broad"}],"termid":"GO:0052929","terms_by_termid":{"GO:0052929":null}}


id: PBO:0074819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 18B","termid":"PBO:0074819"}


id: PBO:0029742
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spherical_cell","termid":"PBO:0029742"}


id: PBO:0000068
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein","termid":"PBO:0000068"}


id: PBO:0074378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 4","termid":"PBO:0074378"}


id: PBO:0062478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily H member 2 pseudogene","termid":"PBO:0062478"}


id: MONDO:0004588
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014872"}]},"cv_name":"mondo","definition":"Inability to see clearly in dim light.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blindness (disorder)","termid":"MONDO:0001941"},{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"night blindness","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:H53.6","UMLS:C0028077","DOID:8499","ICD9:368.60","SCTID:65194006","ICD9:368.6","MEDGEN:10349","MESH:D009755","icd11.foundation:205882698","ICD9:368.69","NCIT:C34850"],"synonyms":[{"name":"nyctalopia","type":"exact"}],"termid":"MONDO:0004588","terms_by_termid":{"MONDO:0014872":null},"xrefs":{"Monarch":{"xref_id":"0004588"}}}


id: PBO:0090866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane fission complex, WD repeat subunit Mdv1","termid":"PBO:0090866"}


id: PBO:0054457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1854","termid":"PBO:0054457"}


id: FYPO:0008211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of antisense RNA measured in a cell is lower than normal duing heat stress. Antisense RNA is transcribed from the coding, rather than the template, strand of DNA.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased antisense RNA level","termid":"FYPO:0004816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased antisense RNA level during heat stress","termid":"FYPO:0008211"}


id: GO:1901217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of holin activity.","definition_xrefs":["GOC:TermGenie","GOC:bm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of holin activity (obsolete GO:1901217)","termid":"GO:1901217"}


id: MONDO:0010435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"},{"relation_name":"is_a","term_name":"GPR143-related foveal hypoplasia","termid":"MONDO:0700230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus 6, congenital, X-linked","secondary_identifiers":["DOID:0111795","MEDGEN:463102","UMLS:C3151752","OMIM:300814"],"synonyms":[{"name":"NYS6","type":"related"},{"name":"NYSTAGMUS 6, congenital, X-linked","type":"related"},{"name":"nystagmus 6, congenital, X-linked","type":"exact"},{"name":"nystagmus 6, congenital, X-linked, X-linked recessive","type":"exact"}],"termid":"MONDO:0010435","xrefs":{"Monarch":{"xref_id":"0010435"}}}


id: PBO:0064787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1G","termid":"PBO:0064787"}


id: PBO:0083128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-ribulose-5-phosphate 3-epimerase; catalyzes a reaction in the non-oxidative part of the pentose-phosphate pathway; mutants are sensitive to oxidative stress","termid":"PBO:0083128"}


id: GO:0048490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of synaptic vesicle along axonal microtubules from the cell body to the presynapse.","definition_xrefs":["GOC:jid","GOC:lmg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde axonal transport","termid":"GO:0008089"},{"relation_name":"is_a","term_name":"synaptic vesicle transport along microtubule","termid":"GO:0099517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"anterograde synaptic vesicle transport","synonyms":[{"name":"anterograde axonal transport of synaptic vesicle","type":"exact"}],"termid":"GO:0048490"}


id: PBO:0072197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 14","termid":"PBO:0072197"}


id: GO:0106112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cohesin ssDNA (lagging strand) loading.","definition_xrefs":["PMID:29358048"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mitotic cohesin ssDNA (lagging strand) loading (obsolete GO:0106112)","termid":"GO:0106112"}


id: FYPO:0001504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of trehalose measured in a cell is lower than normal during sporulation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular trehalose level","termid":"FYPO:0001447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular trehalose level during sporulation","synonyms":[{"name":"decreased cellular trehalose accumulation during sporulation","type":"related"},{"name":"reduced cellular trehalose level during sporulation","type":"exact"}],"termid":"FYPO:0001504"}


id: GO:1904868
data:
  {"annotated_genes":["SJAG_05979","SJAG_04586"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65159,108242],"is_not":false,"summary":null,"term":"GO:1904868"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a telomerase catalytic core complex.","definition_xrefs":["GOC:rph","PMID:26586433","GOC:BHF","GOC:BHF_telomere","GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomerase holoenzyme complex assembly","termid":"GO:1905323"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04586":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"telomerase catalytic core complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"TERT-TERC complex assembly","type":"related"},{"name":"TERT-TERC complex formation","type":"related"},{"name":"telomerase catalytic core complex formation","type":"exact"}],"termid":"GO:1904868","terms_by_termid":{"GO:1904868":null}}


id: PBO:0029273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_MCB_promoters_during_cellular_response_to_hydroxyurea","termid":"PBO:0029273"}


id: PBO:0060045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 33","termid":"PBO:0060045"}


id: PBO:0089650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery iron hydrogenase Nar1","termid":"PBO:0089650"}


id: PBO:0041153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 8","termid":"PBO:0041153"}


id: GO:1990537
data:
  {"annotated_genes":["SJAG_00918","SJAG_02624","SJAG_01613","SJAG_01224"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98939,99539,107811,118441],"is_not":false,"summary":null,"term":"GO:1990537"}]},"cv_name":"cellular_component","definition":"Any of the mitotic spindle microtubules that come from each pole and overlap at the spindle midzone.","definition_xrefs":["PMID:16079915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polar microtubule","termid":"GO:0005827"},{"relation_name":"is_a","term_name":"mitotic spindle microtubule","termid":"GO:1990498"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01224":null,"SJAG_01613":null,"SJAG_02624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0072686"}],"interesting_parent_ids":["GO:0015630","GO:0072686","GO:0005575"],"is_obsolete":false,"name":"mitotic spindle polar microtubule","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990537","terms_by_termid":{"GO:1990537":null}}


id: MONDO:1012605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glycogen storage disease that occurs in dogs due to a glycogen branching enzyme (GBE) deficiency.","definition_xrefs":["OMIA:000420-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disease IV, dog","termid":"MONDO:1012605","xrefs":{"Monarch":{"xref_id":"1012605"}}}


id: PBO:0036416
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Beta Glucan synthase 1","termid":"PBO:0036416"}


id: FYPO:0000894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which intracellular mitochondrion distribution, the process that results in the spatial arrangement of mitochondria in a cell, is abnormal.","definition_xrefs":["GO:0048312","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial distribution","termid":"FYPO:0000489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal intracellular mitochondrion distribution","synonyms":[{"name":"abnormal intracellular mitochondrion distribution during mitotic cell cycle","type":"related"},{"name":"abnormal intracellular mitochondrion distribution during vegetative growth","type":"exact"}],"termid":"FYPO:0000894"}


id: GO:0004327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: formaldehyde + glutathione + NAD+ = S-formylglutathione + NADH + H+.","definition_xrefs":["EC:1.2.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete formaldehyde dehydrogenase (glutathione) activity (obsolete GO:0004327)","synonyms":[{"name":"formaldehyde dehydrogenase (glutathione) activity","type":"exact"}],"termid":"GO:0004327"}


id: GO:1902162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator.","definition_xrefs":["GOC:TermGenie","PMID:17719541"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (obsolete GO:1902162)","termid":"GO:1902162"}


id: MOD:00980
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass - OBSOLETE because redundant, the difference component of MOD:01060. Remap to MOD:01060.","definition_xrefs":["DeltaMass:337"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00980 Carboxamidomethyl (on Cysteine) (obsolete MOD:00980)","termid":"MOD:00980"}


id: MONDO:1010760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pityriasis rosea that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pityriasis rosea, non-human animal","termid":"MONDO:1010134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pityriasis rosea, pig","secondary_identifiers":["OMIA:000801-9823"],"termid":"MONDO:1010760","xrefs":{"Monarch":{"xref_id":"1010760"}}}


id: PBO:0051568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 13 receptor subunit alpha 2","termid":"PBO:0051568"}


id: PBO:0025449
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine transcarbamylase deficiency","termid":"PBO:0025449"}


id: GO:0060098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and arrangement of the plasma membrane that is involved in the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"phagocytosis, engulfment","termid":"GO:0006911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"membrane reorganization involved in phagocytosis, engulfment","synonyms":[{"name":"membrane reorganisation involved in phagocytosis, engulfment","type":"exact"}],"termid":"GO:0060098"}


id: GO:0018535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotine + acceptor + H2O = (S)-6-hydroxynicotine + reduced acceptor.","definition_xrefs":["EC:1.5.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nicotine dehydrogenase activity","secondary_identifiers":["RHEA:14769","UM-BBD_enzymeID:r0979","MetaCyc:NICOTINE-DEHYDROGENASE-RXN","UM-BBD_enzymeID:r0978"],"synonyms":[{"name":"D-nicotine oxidase activity","type":"related"},{"name":"nicotine oxidase activity","type":"related"},{"name":"nicotine:(acceptor) 6-oxidoreductase (hydroxylating)","type":"related"},{"name":"nicotine:acceptor 6-oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0018535"}


id: PBO:0052667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 35","termid":"PBO:0052667"}


id: MONDO:0956975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic asthma that is characterized by the pathophysiology phenotype combination (endotype) of early-onset allergic asthma, late-onset eosinophilic asthma, and aspirin-exacerbated respiratory disease.","definition_xrefs":["DOID:0080817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic asthma","termid":"MONDO:0850282"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T2-high asthma","termid":"MONDO:0956975","xrefs":{"Monarch":{"xref_id":"0956975"}}}


id: GO:1900017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytokine production involved in inflammatory response.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in inflammatory response","termid":"GO:1900015"},{"relation_name":"positively_regulates","term_name":"cytokine production involved in inflammatory response","termid":"GO:0002534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of cytokine production involved in inflammatory response","synonyms":[{"name":"positive regulation of cytokine production involved in acute inflammatory response","type":"narrow"},{"name":"up regulation of cytokine production involved in acute inflammatory response","type":"broad"},{"name":"up regulation of cytokine production involved in inflammatory response","type":"related"}],"termid":"GO:1900017"}


id: PBO:0085381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP-binding cassette (ABC) transporter; multidrug transporter involved in multidrug resistance and resistance to singlet oxygen species","termid":"PBO:0085381"}


id: PBO:0058520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5708","termid":"PBO:0058520"}


id: PBO:0073960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 9","termid":"PBO:0073960"}


id: PR:O14159
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sphingosine kinase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01068","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingoid long chain base kinase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.07c","secondary_identifiers":["UniProtKB:O14159"],"synonyms":[{"name":"LCB kinase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPHK1","type":"exact"},{"name":"sphinganine kinase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14159"}


id: MONDO:1011454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteogenesis imperfecta, non-human animal","secondary_identifiers":["OMIA:000754"],"termid":"MONDO:1011454","xrefs":{"Monarch":{"xref_id":"1011454"}}}


id: MOD:00242
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(ADP-ribosyl)-L-serine.","definition_xrefs":["Unimod:213#S","PubMed:15842200","PubMed:3141412","RESID:AA0237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(ADP-ribosyl)-L-serine","synonyms":[{"name":"(S)-2-amino-3-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]oxy)-propanoic acid","type":"exact"},{"name":"ADP Ribose addition","type":"related"},{"name":"ADP-Ribosyl","type":"related"},{"name":"MOD_RES ADP-ribosylserine","type":"exact"},{"name":"O-(ADP-ribosyl)-L-serine","type":"exact"},{"name":"O3-(ADP-ribosyl)-L-serine","type":"exact"},{"name":"O3-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-serine","type":"exact"},{"name":"O3-alpha-D-ribofuranosyl-L-serine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"},{"name":"OADPRibSer","type":"exact"}],"termid":"MOD:00242"}


id: PBO:0109466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDAH family member 2, ADMA-independent","termid":"PBO:0109466"}


id: MOD:00927
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms of a residue containing common isotopes with two (13)C,3x(2)H labeled methyl groups to form a 2x(13)C,6x(2)H labeled dimethylated residue.","definition_xrefs":["PubMed:16335955","PubMed:3802193","Unimod:510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(13)C,4x(2)H labeled dimethylated residue","synonyms":[{"name":"DiMethyl-C13HD2","type":"related"},{"name":"Dimethyl:2H(4)13C(2)","type":"related"}],"termid":"MOD:00927"}


id: GO:0070692
data:
  {"annotated_genes":["SJAG_03967","SJAG_02057","SJAG_01149"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79894,96134,111221],"is_not":false,"summary":null,"term":"GO:0070692"}]},"cv_name":"cellular_component","definition":"A positive transcription elongation factor complex that comprises the CDK kinase CTK1 (in budding yeast), Lsk1 (in fission yeast) (corresponding to the Panther PTHR24056:SF39 family), a cyclin and an additional gamma subunit (corresponding to the InterPRO entry IPR024638).","definition_xrefs":["GOC:vw","PMID:16721054","GOC:mah","PMID:19328067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin/CDK positive transcription elongation factor complex","termid":"GO:0008024"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01149":null,"SJAG_02057":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"CTDK-1 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"C-terminal domain kinase I complex","type":"exact"},{"name":"CTDK-I complex","type":"exact"},{"name":"Ctk complex","type":"exact"},{"name":"trimeric positive transcription elongation factor complex b","type":"related"}],"termid":"GO:0070692","terms_by_termid":{"GO:0070692":null}}


id: GO:0002834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"regulates","term_name":"response to tumor cell","termid":"GO:0002347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to tumor cell","synonyms":[{"name":"regulation of response to tumour cell","type":"exact"}],"termid":"GO:0002834"}


id: PBO:0039034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 11","termid":"PBO:0039034"}


id: GO:0102165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + (Z)-hex-3-en-1-ol = (3Z)-hex-3-en-1-yl acetate + coenzyme A.","definition_xrefs":["RHEA:28254","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"(Z)-3-hexen-1-ol acetyltransferase activity","secondary_identifiers":["EC:2.3.1.195","MetaCyc:RXN-11852"],"termid":"GO:0102165"}


id: GO:0004791
data:
  {"annotated_genes":["SJAG_03653","SJAG_04399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73554,80041],"is_not":false,"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: thioredoxin-dithiol + NADP+ = thioredoxin-disulfide + H+ + NADPH.","definition_xrefs":["RHEA:20345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"protein-disulfide reductase [NAD(P)H] activity","termid":"GO:0047134"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03653":null,"SJAG_04399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0140096","GO:0015036","GO:0003824"],"is_obsolete":false,"name":"thioredoxin-disulfide reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R02016","Reactome:R-HSA-73646","EC:1.8.1.9","MetaCyc:THIOREDOXIN-REDUCT-NADPH-RXN","Reactome:R-HSA-3323050","Reactome:R-HSA-9617735","Reactome:R-HSA-1222485"],"synonyms":[{"name":"NADPH:oxidized thioredoxin oxidoreductase activity","type":"exact"},{"name":"thioredoxin disulfide reductase activity","type":"broad"},{"name":"thioredoxin reductase (NADPH) activity","type":"exact"},{"name":"thioredoxin-disulfide reductase (NADP) activity","type":"exact"},{"name":"thioredoxin-disulfide reductase activity","type":"broad"},{"name":"thioredoxin-disulphide reductase activity","type":"broad"}],"termid":"GO:0004791","terms_by_termid":{"GO:0004791":null}}


id: PBO:0007914
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli purA","termid":"PBO:0007914"}


id: PBO:0066670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ripply transcriptional repressor 3","termid":"PBO:0066670"}


id: GO:0140479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A biosynthetic process that results in the formation of ergothioneine from histidine via a set of steps including the hercynylcysteine sulfoxide synthase reaction, which converts N-alpha,N-alpha,N-alpha-trimethyl-L-histidine directly to hercynylcysteine sulfoxide.","definition_xrefs":["PMID:24828577","PMID:22209968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ergothioneine biosynthetic process","termid":"GO:0052699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ergothioneine biosynthesis from histidine via hercynylcysteine sulfoxide synthase","termid":"GO:0140479"}


id: PR:O43038
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps36 gene.","definition_xrefs":["UniProtKB:O43038","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein-sorting-associated protein 36 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.09","synonyms":[{"name":"Spom972h-vps36","type":"exact"}],"termid":"PR:O43038"}


id: PBO:0002136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Ssr1","termid":"PBO:0002136"}


id: PBO:0058798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7704","termid":"PBO:0058798"}


id: GO:0021742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the abducens nucleus over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:curators","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nucleus development","termid":"GO:0021742"}


id: GO:0003227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the right ventricular myocardium are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"right ventricular cardiac muscle tissue morphogenesis","termid":"GO:0003221"},{"relation_name":"is_a","term_name":"ventricular trabecula myocardium morphogenesis","termid":"GO:0003222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"right ventricular trabecular myocardium morphogenesis","termid":"GO:0003227"}


id: MONDO:0030602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An pneumonia caused by infection with Klebsiella.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial pneumonia","termid":"MONDO:0004652"},{"relation_name":"is_a","term_name":"Klebsiella infectious disease","termid":"MONDO:0030603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Klebsiella pneumonia","secondary_identifiers":["MEDGEN:636012","MESH:D007710","DOID:13272","SCTID:64479007","UMLS:C0519030","ICD10CM:J15.0","ICD9:482.0"],"synonyms":[{"name":"Klebsiella caused pneumonia","type":"exact"},{"name":"pneumonia caused by Klebsiella pneumoniae","type":"related"},{"name":"pneumonia due to Klebsiella pneumoniae","type":"exact"},{"name":"pneumonia due to Klebsiella pneumoniae (disorder)","type":"exact"}],"termid":"MONDO:0030602","xrefs":{"Monarch":{"xref_id":"0030602"}}}


id: PBO:0088510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein AdoMet-dependent proline dimethyltransferase Tae1","termid":"PBO:0088510"}


id: MONDO:0017728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Tay-Sachs disease","termid":"MONDO:0010100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0002039","MONDO:0005244","MONDO:0002525","MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"Tay-Sachs disease, B1 variant","secondary_identifiers":["Orphanet:309239","SCTID:238024005","UMLS:C1848916","GARD:21327","MEDGEN:336452"],"synonyms":[{"name":"GM2 gangliosidosis, B1 variant","type":"exact"},{"name":"hexosaminidase A deficiency, B1 variant","type":"exact"}],"termid":"MONDO:0017728","xrefs":{"Monarch":{"xref_id":"0017728"}}}


id: PBO:0047614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen C domain containing 1","termid":"PBO:0047614"}


id: PBO:0072975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2A member 1","termid":"PBO:0072975"}


id: RO:0002130
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A general relation between a neuron and some structure in which it either chemically synapses to some target or in which it receives (chemical) synaptic input.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_synaptic_terminal_in","termid":"RO:0002130"}


id: PBO:0050781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1E","termid":"PBO:0050781"}


id: PBO:0043747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7B pseudogene 1","termid":"PBO:0043747"}


id: GO:0048391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the intermediate mesoderm. This process pertains to the initial formation of the structure from unspecified parts.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm formation","termid":"GO:0001707"},{"relation_name":"part_of","term_name":"intermediate mesoderm morphogenesis","termid":"GO:0048390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesoderm formation","secondary_identifiers":["Reactome:R-HSA-9761174"],"termid":"GO:0048391"}


id: PBO:0043895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 1 pseudogene 2","termid":"PBO:0043895"}


id: MONDO:0014606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-microcephaly-strabismus-behavioral abnormalities syndrome is a rare, genetic, syndromic intellectual disability disorder characterized by craniofacial dysmorphism (microcephaly, hypotonic facies, strabismus, long and flat malar region, posteriorly rotated ears, flat nasal bridge with broad nasal tip, short philtrum, thin vermillion border, open mouth with down-turned corners, high arched palate, pointed chin), global developmental delay, intellectual disability and variable neurobehavioral abnormalities (autism spectrum disorder, aggressiveness, self injury). Additional features include vision abnormalities and variable sensorineural hearing loss, as well as short stature, hypotonia and gastrointestinal manifestations (e.g. poor feeding, gastroesophageal reflux, constipation).","definition_xrefs":["Orphanet:468678"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability-microcephaly-strabismus-behavioral abnormalities syndrome","secondary_identifiers":["GARD:13774","OMIM:616364","DOID:0070067","UMLS:C4225351","MEDGEN:897984"],"synonyms":[{"name":"MRD37","type":"exact"},{"name":"WHITE-Sutton syndrome","type":"related"},{"name":"WHSUS","type":"exact"},{"name":"White-Sutton syndrome","type":"related"},{"name":"autosomal dominant intellectual disability 37","type":"exact"},{"name":"autosomal dominant mental retardation 37","type":"exact"},{"name":"intellectual disability, autosomal dominant 37","type":"related"},{"name":"intellectual disability, autosomal dominant type 37","type":"exact"},{"name":"intellectual disability-microcephaly-strabismus-behavioral abnormalities syndrome","type":"exact"},{"name":"mental retardation, autosomal dominant 37","type":"related"},{"name":"mental retardation, autosomal dominant type 37","type":"exact"}],"termid":"MONDO:0014606","xrefs":{"Monarch":{"xref_id":"0014606"}}}


id: GO:0039522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal movement of mRNA from the nucleus to the cytoplasm of the host cell, leading to shutoff of host protein expression. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:sp","PMID:22334672","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host gene expression","termid":"GO:0039657"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host intracellular transport","termid":"GO:0052038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host mRNA export from nucleus","secondary_identifiers":["VZ:902"],"synonyms":[{"name":"inhibition by virus of host mRNA nuclear export","type":"narrow"},{"name":"inhibition of host mRNA nuclear export by virus","type":"narrow"},{"name":"negative regulation by virus of host mRNA nuclear export","type":"broad"},{"name":"suppression by virus of host mRNA export from nucleus","type":"narrow"},{"name":"suppression of host mRNA nuclear export by virus","type":"narrow"}],"termid":"GO:0039522"}


id: GO:0010689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes by RNA polymerase II, originating at an RNA polymerase II promoter, as a result of a chemical stimulus.","definition_xrefs":["GOC:dph","GOC:tb","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0010688"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to chemical stimulus","termid":"GO:0010689"}


id: MONDO:0007387
data:
  {"annotated_genes":["SJAG_00796"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85899],"is_not":false,"summary":null,"term":"MONDO:0007387"}]},"cv_name":"mondo","definition":"Any Cornelia de Lange syndrome in which the cause of the disease is a mutation in the NIPBL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cornelia de Lange syndrome","termid":"MONDO:0016033"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00796":null},"genotype_count":0,"is_obsolete":false,"name":"Cornelia de Lange syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1645760","OMIM:122470","ICD9:759.89","UMLS:C4551851","SCTID:40354009","DOID:0080505"],"synonyms":[{"name":"Brachmann-De Lange syndrome","type":"related"},{"name":"CDLS1","type":"related"},{"name":"Cdl","type":"related"},{"name":"Cornelia DE Lange syndrome 1","type":"related"},{"name":"Cornelia De Lange syndrome type 1","type":"exact"},{"name":"Cornelia de Lange syndrome 1","type":"exact"},{"name":"Cornelia de Lange syndrome caused by mutation in NIPBL","type":"exact"},{"name":"De Lange syndrome","type":"related"},{"name":"NIPBL Cornelia de Lange syndrome","type":"exact"},{"name":"typus Degenerativus Amstelodamensis","type":"related"}],"termid":"MONDO:0007387","terms_by_termid":{"MONDO:0007387":null},"xrefs":{"Monarch":{"xref_id":"0007387"}}}


id: PBO:0086669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0086669"}


id: PBO:0085720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in telomeric and mating-type locus silencing; interacts with Sir2p and also interacts with Gal11p, which is a component of the RNA pol II mediator complex; ESC8 has a paralog, IOC3, that arose from the whole genome duplication","termid":"PBO:0085720"}


id: PBO:0048147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 6 pseudogene 3","termid":"PBO:0048147"}


id: PBO:0050089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 2","termid":"PBO:0050089"}


id: PBO:0116605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-coding adipose anti-inflammatory","termid":"PBO:0116605"}


id: GO:0035825
data:
  {"annotated_genes":["SJAG_03438","SJAG_02465","SJAG_02460","SJAG_01601","SJAG_00908","SJAG_00172","SJAG_00980","SJAG_02724","SJAG_01138","SJAG_07002","SJAG_01044","SJAG_05239","SJAG_04950","SJAG_00727","SJAG_00377","SJAG_03720","SJAG_04748","SJAG_02556","SJAG_00100","SJAG_03567","SJAG_02295","SJAG_02226","SJAG_02592","SJAG_03097","SJAG_00623","SJAG_03221","SJAG_03048","SJAG_02616","SJAG_05295","SJAG_03525","SJAG_02181","SJAG_00247","SJAG_01410","SJAG_02311","SJAG_02079","SJAG_05333","SJAG_02828","SJAG_01156","SJAG_01677","SJAG_01419","SJAG_00935","SJAG_03219","SJAG_02339","SJAG_01076","SJAG_02708","SJAG_02294","SJAG_02822","SJAG_01708","SJAG_00757","SJAG_03751","SJAG_04816","SJAG_04303","SJAG_02652","SJAG_05373","SJAG_02490","SJAG_00266","SJAG_01495","SJAG_02267","SJAG_04205"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104738],"is_not":false,"summary":null,"term":"GO:0035825"},{"annotations":[108277],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010846"},{"annotations":[107970,99379,117098,89503,88882],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990918"},{"annotations":[110610,111132,88273,115326,117101,99443,106948,89634,96508,106389,97750,119063,89506,108825,100902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007534"},{"annotations":[90677,109954,105196,109057,111435],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010780"},{"annotations":[110612,107972],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[89635,100868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006311"},{"annotations":[110613,88823,100869,101838,107973,117403,79263,97248],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000709"},{"annotations":[79257,100870,88824],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010774"},{"annotations":[108280],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045128"},{"annotations":[108668,102692],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905263"},{"annotations":[89403],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010845"},{"annotations":[79593,89937,93022,93095,100905,71443,105160,115841,101462,104643,107040,104183,91146,78198,100968,91812,69631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007131"},{"annotations":[94716,116587,89510],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010520"},{"annotations":[75313,72050,108457,117749,117599,79538,109392,74776,77043,110636],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000712"},{"annotations":[116536],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"A DNA recombination process that results in the exchange of an equal amount of genetic material between highly homologous DNA molecules.","definition_xrefs":["GOC:mah","PMID:11139492","PMID:17304215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":59,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00172":null,"SJAG_00247":null,"SJAG_00266":null,"SJAG_00377":null,"SJAG_00623":null,"SJAG_00727":null,"SJAG_00757":null,"SJAG_00908":null,"SJAG_00935":null,"SJAG_00980":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01138":null,"SJAG_01156":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_01708":null,"SJAG_02079":null,"SJAG_02181":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02294":null,"SJAG_02295":null,"SJAG_02311":null,"SJAG_02339":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02490":null,"SJAG_02556":null,"SJAG_02592":null,"SJAG_02616":null,"SJAG_02652":null,"SJAG_02708":null,"SJAG_02724":null,"SJAG_02822":null,"SJAG_02828":null,"SJAG_03048":null,"SJAG_03097":null,"SJAG_03219":null,"SJAG_03221":null,"SJAG_03438":null,"SJAG_03525":null,"SJAG_03567":null,"SJAG_03720":null,"SJAG_03751":null,"SJAG_04205":null,"SJAG_04303":null,"SJAG_04748":null,"SJAG_04816":null,"SJAG_04950":null,"SJAG_05239":null,"SJAG_05295":null,"SJAG_05333":null,"SJAG_05373":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"homologous recombination","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Chromosomal_crossover"],"synonyms":[{"name":"chromosomal crossover","type":"related"},{"name":"interchromosomal DNA recombination","type":"exact"},{"name":"interstrand DNA recombination","type":"exact"},{"name":"reciprocal DNA recombination","type":"narrow"}],"termid":"GO:0035825","terms_by_termid":{"GO:0000709":null,"GO:0000712":null,"GO:0006311":null,"GO:0007131":null,"GO:0007534":null,"GO:0010520":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0010845":null,"GO:0010846":null,"GO:0035825":null,"GO:0045128":null,"GO:0062209":null,"GO:1905263":null,"GO:1990918":null}}


id: PBO:0109611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioma stem cell association long noncoding RNA","termid":"PBO:0109611"}


id: GO:0051851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an host alters or subverts a process in a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated perturbation of symbiont process","synonyms":[{"name":"modification by host of symbiont morphology or physiology","type":"related"},{"name":"modulation by host of symbiont process","type":"exact"}],"termid":"GO:0051851"}


id: PBO:0064468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta interacting protein 2","termid":"PBO:0064468"}


id: FYPO:0001811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-phosphoribosyl diphosphate measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered 5-phosphoribosyl diphosphate level","synonyms":[{"name":"abnormal 5-phosphoribosyl diphosphate level","type":"exact"},{"name":"altered 5-O-phosphono-alpha-D-ribofuranosyl diphosphate level","type":"exact"},{"name":"altered 5-phosphoribosyl diphosphate level during mitotic cell cycle","type":"related"},{"name":"altered 5-phosphoribosyl diphosphate level during vegetative growth","type":"exact"},{"name":"altered cellular 5-phosphoribosyl diphosphate level","type":"exact"}],"termid":"FYPO:0001811"}


id: GO:1903980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microglial cell activation.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:19100238","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macrophage activation","termid":"GO:0043032"},{"relation_name":"is_a","term_name":"positive regulation of neuroinflammatory response","termid":"GO:0150078"},{"relation_name":"is_a","term_name":"regulation of microglial cell activation","termid":"GO:1903978"},{"relation_name":"positively_regulates","term_name":"microglial cell activation","termid":"GO:0001774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microglial cell activation","synonyms":[{"name":"activation of microglial cell activation","type":"narrow"},{"name":"up regulation of microglial cell activation","type":"exact"},{"name":"up-regulation of microglial cell activation","type":"exact"},{"name":"upregulation of microglial cell activation","type":"exact"}],"termid":"GO:1903980"}


id: PBO:0082026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger ZZ-type containing 3","termid":"PBO:0082026"}


id: PBO:0029612
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_tapered_cell","termid":"PBO:0029612"}


id: MONDO:0015309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Auriculocondylar syndrome (obsolete MONDO:0015309)","termid":"MONDO:0015309","xrefs":{"Monarch":{"xref_id":"0015309"}}}


id: GO:0021863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of basal progenitor cells, neuroblasts that lose their contacts with the ventricular surface. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:jid","PMID:16226447","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblast differentiation","termid":"GO:0014016"},{"relation_name":"part_of","term_name":"forebrain generation of neurons","termid":"GO:0021872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain neuroblast differentiation","synonyms":[{"name":"abventricular progenitor cell differentiation","type":"exact"},{"name":"intermediate progenitor cell differentiation","type":"exact"},{"name":"non-surface dividing progenitor cell differentiation","type":"exact"}],"termid":"GO:0021863"}


id: PBO:0054760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2172","termid":"PBO:0054760"}


id: FYPO:0007711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Ssb1 accumulates normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:33723569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal number of Ssb1 foci","synonyms":[{"name":"normal number of RPA foci","type":"exact"},{"name":"normal number of Rad11 foci","type":"exact"},{"name":"normal number of Rpa1 foci","type":"exact"},{"name":"normal number of Ssb1 foci during mitotic cell cycle","type":"related"},{"name":"normal number of Ssb1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0007711"}


id: MONDO:0100526
data:
  {"annotated_genes":["SJAG_02181","SJAG_02708"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013253"},{"annotations":[87645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013669"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02181":null,"SJAG_02708":null},"genotype_count":0,"is_obsolete":false,"name":"breast-ovarian cancer, familial, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:604370"],"termid":"MONDO:0100526","terms_by_termid":{"MONDO:0013253":null,"MONDO:0013669":null},"xrefs":{"Monarch":{"xref_id":"0100526"}}}


id: PBO:0030053
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ansamitocin_P-3","termid":"PBO:0030053"}


id: PBO:0057169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320e","termid":"PBO:0057169"}


id: PBO:0066613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 2","termid":"PBO:0066613"}


id: MONDO:0014152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the PRDM16 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction 8","secondary_identifiers":["UMLS:C3809288","DOID:0081157","GARD:15952","MEDGEN:815618","OMIM:615373"],"synonyms":[{"name":"LVNC8","type":"related"},{"name":"PRDM16 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1Ll","type":"related"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in PRDM16","type":"exact"},{"name":"left ventricular noncompaction 8","type":"exact"},{"name":"left ventricular noncompaction type 8","type":"exact"}],"termid":"MONDO:0014152","xrefs":{"Monarch":{"xref_id":"0014152"}}}


id: GO:0010888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid storage","termid":"GO:0010883"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of lipid localization","termid":"GO:1905953"},{"relation_name":"negatively_regulates","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipid storage","termid":"GO:0010888"}


id: GO:0001048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to RNA polymerase IV core enzyme, a multisubunit eukaryotic nuclear RNA polymerase found in plants and involved in siRNA production.","definition_xrefs":["GOC:txnOH","PMID:19110459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"RNA polymerase IV core binding","termid":"GO:0001048"}


id: PBO:0088196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger transcription factor involved in arginine-responsive genes; Zn(2)-Cys(6) binuclear cluster domain type; involved in the regulation of arginine-responsive genes; acts with Arg80p and Arg82p","termid":"PBO:0088196"}


id: PBO:0054651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2056","termid":"PBO:0054651"}


id: PBO:0069320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 578, pseudogene","termid":"PBO:0069320"}


id: GO:0120330
data:
  {"annotated_genes":["SJAG_01581","SJAG_04062","SJAG_04252","SJAG_01056","SJAG_03496","SJAG_03789"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72036,78984,104428,117483,118496,118858],"is_not":false,"summary":null,"term":"GO:0120330"}]},"cv_name":"cellular_component","definition":"A conserved RNA endonuclease complex required for spreading and epigenetic inheritance of heterochromatin. The rixosome contains six unique subunits: three structural subunits (Crb3, Rix1, and Ipi1) which form the core of the complex, and three catalytic subunits (the endonuclease Las1, the polynucleotide kinase Grc3, and the AAA-type ATPase Mdn1), which are involved in the processing of ribosomal RNA precursors. All subunits are essential for viability and are conserved from yeast to mammals, including humans.","definition_xrefs":["PMID:35355014","GOC:vw","PMID:32491985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01056":null,"SJAG_01581":null,"SJAG_03496":null,"SJAG_03789":null,"SJAG_04062":null,"SJAG_04252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"rixosome complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"rix1 complex","type":"narrow"}],"termid":"GO:0120330","terms_by_termid":{"GO:0120330":null}}


id: PBO:0052089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 6","termid":"PBO:0052089"}


id: PBO:0054089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1442","termid":"PBO:0054089"}


id: PBO:0038842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 10","termid":"PBO:0038842"}


id: MONDO:0012764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disease characterized by increased radiosensitivity, immunodeficiency, mild motor control and learning difficulties, facial dysmorphism, and short stature that has material basis in homozygous or compound heterozygous mutation in the RNF168 gene on chromosome 3q29.","definition_xrefs":["DOID:0090113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"RIDDLE syndrome","secondary_identifiers":["NANDO:2200710","NANDO:1200336","UMLS:C2677792","MESH:C567453","OMIM:611943","GARD:17701","MEDGEN:394368","Orphanet:420741"],"synonyms":[{"name":"RIDDLE syndrome","type":"exact"},{"name":"RNF168 deficiency","type":"exact"},{"name":"radiosensitivity, immunodeficiency, dysmorphic features, and learning difficulties","type":"related"},{"name":"radiosensitivity-immunodeficiency-dysmorphic features-learning difficulties syndrome","type":"exact"}],"termid":"MONDO:0012764","xrefs":{"Monarch":{"xref_id":"0012764"}}}


id: PBO:0066548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 11","termid":"PBO:0066548"}


id: PBO:0089745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Mpp10","termid":"PBO:0089745"}


id: MONDO:0017594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell non-Hodgkin lymphoma","termid":"MONDO:0015759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"indolent B-cell non-Hodgkin lymphoma","secondary_identifiers":["NCIT:C171299","MEDGEN:1741600","UMLS:C5419078","GARD:21244","Orphanet:300842"],"synonyms":[{"name":"B cell lymphoma, indolent","type":"related"},{"name":"indolent B cell lymphoma","type":"related"},{"name":"indolent B-cell NHL","type":"exact"}],"termid":"MONDO:0017594","xrefs":{"Monarch":{"xref_id":"0017594"}}}


id: GO:1904976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bleomycin stimulus.","definition_xrefs":["PMID:11553781","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to bleomycin","termid":"GO:1904975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bleomycin","termid":"GO:1904976"}


id: PBO:0052418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kirre like nephrin family adhesion molecule 1","termid":"PBO:0052418"}


id: PATO:0000586
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased size","secondary_identifiers":["PATO:0001202"],"synonyms":[{"name":"big","type":"related"},{"name":"enlarged","type":"related"},{"name":"expanded","type":"related"},{"name":"great","type":"related"},{"name":"large","type":"related"}],"termid":"PATO:0000586"}


id: GO:0000957
data:
  {"annotated_genes":["SJAG_02526","SJAG_01948","SJAG_02383"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90720,91122,114190],"is_not":false,"summary":null,"term":"GO:0000957"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of RNA transcribed from the mitochondrial genome and occurring in the mitochondrion.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01948":null,"SJAG_02383":null,"SJAG_02526":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial RNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9836573"],"termid":"GO:0000957","terms_by_termid":{"GO:0000957":null}}


id: GO:1905636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of RNA polymerase II regulatory region sequence-specific DNA binding.","definition_xrefs":["GO_REF:0000059","GOC:PARL","GOC:TermGenie","PMID:23675531","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA polymerase II regulatory region sequence-specific DNA binding","termid":"GO:1903025"},{"relation_name":"is_a","term_name":"positive regulation of transcription regulatory region DNA binding","termid":"GO:2000679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of RNA polymerase II regulatory region sequence-specific DNA binding","synonyms":[{"name":"activation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"narrow"},{"name":"up regulation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"exact"},{"name":"up-regulation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"exact"},{"name":"upregulation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"exact"}],"termid":"GO:1905636"}


id: PATO:0001149
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001149 susceptibility value (obsolete PATO:0001149)","termid":"PATO:0001149"}


id: GO:0035691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by macrophage migration inhibitory factor binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:BHF","PMID:12782713","PMID:19413900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"macrophage migration inhibitory factor signaling pathway","synonyms":[{"name":"MIF signaling pathway","type":"exact"},{"name":"macrophage migration inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:0035691"}


id: GO:0071803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of podosome assembly.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of podosome assembly","termid":"GO:0071801"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"positively_regulates","term_name":"podosome assembly","termid":"GO:0071800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of podosome assembly","synonyms":[{"name":"activation of podosome assembly","type":"narrow"},{"name":"stimulation of podosome assembly","type":"narrow"},{"name":"up regulation of podosome assembly","type":"exact"},{"name":"up-regulation of podosome assembly","type":"exact"},{"name":"upregulation of podosome assembly","type":"exact"}],"termid":"GO:0071803"}


id: PBO:0012863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Csl4","termid":"PBO:0012863"}


id: MONDO:0006476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma without evidence of differentiation arising from the gallbladder. The most common variant is the spindle and giant cell type which resembles a sarcoma.","definition_xrefs":["NCIT:C9167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder carcinoma","termid":"MONDO:0003220"},{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"undifferentiated gallbladder carcinoma","secondary_identifiers":["UMLS:C0279653","EFO:1000604","MEDGEN:76010"],"synonyms":[{"name":"anaplastic carcinoma of gallbladder","type":"exact"},{"name":"anaplastic carcinoma of the gallbladder","type":"exact"},{"name":"anaplastic gallbladder carcinoma","type":"exact"},{"name":"gall bladder undifferentiated carcinoma","type":"exact"},{"name":"gallbladder undifferentiated carcinoma","type":"exact"},{"name":"undifferentiated carcinoma of gallbladder","type":"exact"},{"name":"undifferentiated carcinoma of the gallbladder","type":"exact"},{"name":"undifferentiated gallbladder cancer","type":"exact"},{"name":"undifferentiated gallbladder carcinoma","type":"exact"}],"termid":"MONDO:0006476","xrefs":{"Monarch":{"xref_id":"0006476"}}}


id: MONDO:0100046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing exfoliation syndrome.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exfoliation syndrome, susceptibility to","secondary_identifiers":["OMIM:177650","UMLS:C4016255","MEDGEN:864692"],"synonyms":[{"name":"pseudoexfoliation glaucoma","type":"related"},{"name":"pseudoexfoliation of the lens","type":"related"},{"name":"pseudoexfoliation syndrome","type":"related"}],"termid":"MONDO:0100046","xrefs":{"Monarch":{"xref_id":"0100046"}}}


id: GO:0102761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-eriodictyol + S-adenosyl-L-methionine = (S)-homoeriodictyol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:60948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"eriodictyol 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7753"],"termid":"GO:0102761"}


id: MONDO:0001424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Meningitis that arises from sarcoidosis.","definition_xrefs":["Wikipedia:Neurosarcoidosis"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infectious meningitis","termid":"MONDO:0004796"}],"gene_count":0,"genotype_count":0,"name":"obsolete sarcoid meningitis (obsolete MONDO:0001424)","secondary_identifiers":["ICD9:321.4","ICD10CM:D86.81","DOID:12055","SCTID:192673008"],"synonyms":[{"name":"meningitis in sarcoidosis","type":"exact"}],"termid":"MONDO:0001424","xrefs":{"Monarch":{"xref_id":"0001424"}}}


id: GO:0061335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of an epithelial cell dependent on cycles of endoreplication, where growth contributes to the shaping of the Malpighian tubule.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph","PMID:19783135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"Malpighian tubule morphogenesis","termid":"GO:0007443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell growth involved in Malpighian tubule morphogenesis","termid":"GO:0061335"}


id: MONDO:0021529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the chest wall.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"neoplasm of chest wall","termid":"MONDO:0021388"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of chest wall","secondary_identifiers":["MEDGEN:195776","NCIT:C8529","SCTID:92058007","UMLS:C0684831","ICD9:229.8"],"synonyms":[{"name":"benign chest wall neoplasm","type":"exact"},{"name":"benign chest wall tumor","type":"exact"},{"name":"benign chest wall tumour","type":"exact"},{"name":"benign neoplasm of the chest wall","type":"exact"},{"name":"benign tumor of chest wall","type":"exact"},{"name":"benign tumor of the chest wall","type":"exact"},{"name":"benign tumour of chest wall","type":"exact"},{"name":"benign tumour of the chest wall","type":"exact"},{"name":"chest wall benign neoplasm","type":"exact"}],"termid":"MONDO:0021529","xrefs":{"Monarch":{"xref_id":"0021529"}}}


id: PBO:0065577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parathyroid hormone 2","termid":"PBO:0065577"}


id: GO:0008804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + NH3 + CO2 = ADP + carbamoyl phosphate.","definition_xrefs":["EC:2.7.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"carbamate kinase activity","secondary_identifiers":["RHEA:10152","MetaCyc:CARBAMATE-KINASE-RXN"],"synonyms":[{"name":"ATP:carbamate phosphotransferase activity","type":"related"},{"name":"CKase activity","type":"related"},{"name":"carbamoyl phosphokinase activity","type":"related"},{"name":"carbamyl phosphokinase activity","type":"related"}],"termid":"GO:0008804"}


id: PBO:0041903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBFA2/RUNX1 partner transcriptional co-repressor 3","termid":"PBO:0041903"}


id: GO:0070040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine2503 in 23S rRNA + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = 2-methyladenosine2503 in 23S rRNA + 5'-deoxyadenosine + L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin] + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:imk","PMID:21415317","PMID:21368151","RHEA:42916","PMID:20007606","PMID:21527678","PMID:20184321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"rRNA (adenine(2503)-C2-)-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11586"],"synonyms":[{"name":"rRNA (adenine-C2-)-methyltransferase activity","type":"broad"}],"termid":"GO:0070040"}


id: GO:0001015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nucleolar RNA (snoRNA) from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"},{"relation_name":"is_a","term_name":"sno(s)RNA transcription","termid":"GO:0009302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016074","GO:0006351"],"is_obsolete":false,"name":"snoRNA transcription by RNA polymerase II","synonyms":[{"name":"snoRNA transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0001015"}


id: PBO:0084890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translational activator of the COB mRNA; interacts with translating ribosomes, acts on the COB mRNA 5'-untranslated leader","termid":"PBO:0084890"}


id: RO:HOM0000052
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Peramorphosis that is produced by a delay in the offset of development.","definition_xrefs":["ISBN:978-0674639416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_peramorphosis_relationship_with","termid":"RO:HOM0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_hypermorphosis_relationship_with","termid":"RO:HOM0000052"}


id: GO:0141077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or disrupts an interferon-mediated signaling in the host organism.","definition_xrefs":["PMID:31266861","PMID:34305858"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression of host interferon-mediated signaling pathway (obsolete GO:0141077)","synonyms":[{"name":"inhibition of host interferon signaling pathway","type":"related"},{"name":"negative regulation of host interferon-mediated signaling pathway","type":"exact"},{"name":"suppression of host IFN-mediated signaling pathway","type":"exact"},{"name":"suppression of host interferon-mediated signaling pathway","type":"narrow"},{"name":"symbiont-mediated of host interferon-mediated signaling pathway","type":"related"}],"termid":"GO:0141077"}


id: PBO:0073610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siah E3 ubiquitin protein ligase 1 pseudogene 1","termid":"PBO:0073610"}


id: PBO:0025541
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae VAM7","termid":"PBO:0025541"}


id: PR:Q9HDT8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP20C8.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDT8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0612 protein P20C8.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP20C8.01c","synonyms":[{"name":"Spom972h-SPCP20C8.01c","type":"exact"}],"termid":"PR:Q9HDT8"}


id: GO:0051545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of elastin.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of elastin biosynthetic process (obsolete GO:0051545)","synonyms":[{"name":"down regulation of elastin biosynthetic process","type":"exact"},{"name":"down-regulation of elastin biosynthetic process","type":"exact"},{"name":"downregulation of elastin biosynthetic process","type":"exact"},{"name":"inhibition of elastin biosynthetic process","type":"narrow"}],"termid":"GO:0051545"}


id: MONDO:0015240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Digitotalar dysmorphism, also known as distal arthrogryposis type 1 (DA1), is an autosomal dominant congenital anomaly characterized by contractures of the distal regions of the hands and feet with no facial involvement or any additional anomalies. It is the most common type of distal arthrogryposis.","definition_xrefs":["Orphanet:1146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digitotalar dysmorphism","secondary_identifiers":["GARD:787","DOID:0111596","icd11.foundation:1679749810","MESH:C565097"],"synonyms":[{"name":"AMCD1","type":"related"},{"name":"DA1","type":"exact"},{"name":"arthrogryposis multiplex congenita distal type 1","type":"exact"},{"name":"digitotalar dysmorphism","type":"exact"},{"name":"distal arthrogryposis type 1","type":"exact"},{"name":"distal arthrogryposis type 1A (sub-type)","type":"narrow"},{"name":"distal arthrogryposis type 1B (sub-type)","type":"narrow"}],"termid":"MONDO:0015240","xrefs":{"Monarch":{"xref_id":"0015240"}}}


id: MOD:00364
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 5-hydroxy-N6,N6,N6-trimethyl-L-lysine.","definition_xrefs":["PubMed:14661085","Unimod:445#K","PubMed:11349130","RESID:AA0359"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"5-hydroxy-L-lysine","termid":"MOD:00037"},{"relation_name":"has_functional_parent","term_name":"N6,N6,N6-trimethyl-L-lysine","termid":"MOD:00083"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"5-hydroxy-N6,N6,N6-trimethyl-L-lysine","synonyms":[{"name":"(2R,5Xi)-5-amino-5-carboxy-2-hydroxy-N,N,N-trimethylpentan-1-aminium","type":"exact"},{"name":"(2Xi,5S)-5-amino-5-carboxy-2-hydroxy-N,N,N-trimethylpentanaminium","type":"exact"},{"name":"(2Xi,5S)-5-azanyl-5-carboxy-2-hydroxy-N,N,N-trimethylpentanazanium","type":"exact"},{"name":"5-hydroxy-N(zeta)-trimethyllysine","type":"exact"},{"name":"5-hydroxy-N6,N6,N6-trimethyl","type":"related"},{"name":"5-hydroxy-N6,N6,N6-trimethyl-L-lysine","type":"exact"},{"name":"5-hydroxy-N6,N6,N6-trimethyllysin-N6-ium","type":"exact"},{"name":"5-hydroxy-N6,N6,N6-trimethyllysine cation","type":"exact"},{"name":"5-hydroxylated N6,N6,N6-trimethylated L-lysine","type":"exact"},{"name":"5HyN6Me3Lys","type":"exact"},{"name":"Hydroxytrimethyl","type":"related"},{"name":"MOD_RES N6,N6,N6-trimethyl-5-hydroxylysine","type":"exact"},{"name":"alpha-amino-epsilon-dimethylamino-delta-hydroxycaproic acid","type":"exact"},{"name":"delta-hydroxy-epsilon-N,N,N-trimethyllysine","type":"exact"},{"name":"lysine derivative Lys(z)","type":"exact"}],"termid":"MOD:00364"}


id: FYPO:0002120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sodium:hydrogen antiporter activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transmembrane transporter activity","termid":"FYPO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0002114","FYPO:0000002","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal sodium:hydrogen antiporter activity","termid":"FYPO:0002120"}


id: GO:0140064
data:
  {"annotated_genes":["SJAG_02773","SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91757,99294],"is_not":false,"summary":null,"term":"GO:0140064"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: crotonyl-CoA + lysine in peptide = CoA + N-crotonyl-lysine-peptide.","definition_xrefs":["PMID:25818647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02773":null,"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"peptide crotonyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:53908"],"synonyms":[{"name":"protein crotonyltransferase activity","type":"related"}],"termid":"GO:0140064","terms_by_termid":{"GO:0140064":null}}


id: PBO:0090521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-pass membrane and CBS domain protein, implicated in magnesium homeostasis and endomembrane organization","termid":"PBO:0090521"}


id: PBO:0035861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton","termid":"PBO:0035861"}


id: PBO:0073795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 2","termid":"PBO:0073795"}


id: PBO:0027485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondria_present_in_decreased_numbers_during_G0","termid":"PBO:0027485"}


id: GO:0000737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of DNA, involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of deoxyribonucleotides.","definition_xrefs":["GOC:elh","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA catabolic process, endonucleolytic (obsolete GO:0000737)","synonyms":[{"name":"DNA breakdown, endonucleolytic","type":"exact"},{"name":"DNA degradation, endonucleolytic","type":"exact"},{"name":"endonucleolytic DNA catabolism","type":"exact"},{"name":"endonucleolytic degradation of DNA","type":"exact"}],"termid":"GO:0000737"}


id: MONDO:1012561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial fission encephalopathy, non-human animal","termid":"MONDO:1011723"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission encephalopathy, dog","secondary_identifiers":["OMIA:002551-9615"],"termid":"MONDO:1012561","xrefs":{"Monarch":{"xref_id":"1012561"}}}


id: MONDO:0010520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of Alport syndrome.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"Alport syndrome","termid":"MONDO:0018965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"X-linked Alport syndrome","secondary_identifiers":["DOID:0110034","SCTID:717768004","MedDRA:10001843","OMIM:301050","GARD:16774","Orphanet:88917","MEDGEN:1648433","UMLS:C4746986"],"synonyms":[{"name":"ATS","type":"related"},{"name":"Alport syndrome 1, X-linked, X-linked dominant","type":"exact"},{"name":"Alport syndrome, X-linked","type":"exact"},{"name":"X-linked Alport syndrome","type":"exact"},{"name":"congenital hereditary hematuria","type":"related"},{"name":"hemorrhagic familial nephritis","type":"related"},{"name":"hemorrhagic hereditary nephritis","type":"related"},{"name":"nephropathy and deafness, X-linked","type":"exact"}],"termid":"MONDO:0010520","xrefs":{"Monarch":{"xref_id":"0010520"}}}


id: PBO:0002703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF2 alpha kinase Hri1","termid":"PBO:0002703"}


id: PBO:0001188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase Jmj2","termid":"PBO:0001188"}


id: PBO:0111746
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3HC4 type (RING finger)","termid":"PBO:0111746"}


id: PBO:0057785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3065","termid":"PBO:0057785"}


id: PBO:0056132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme like 1","termid":"PBO:0056132"}


id: PBO:0062640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily K member 1 pseudogene","termid":"PBO:0062640"}


id: GO:0075081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of transmembrane receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont transmembrane receptor-mediated signal transduction (obsolete GO:0075081)","termid":"GO:0075081"}


id: GO:0042058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"regulates","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of epidermal growth factor receptor signaling pathway","synonyms":[{"name":"regulation of EGF receptor signaling pathway","type":"exact"},{"name":"regulation of EGF receptor signalling pathway","type":"exact"},{"name":"regulation of EGFR signaling pathway","type":"exact"}],"termid":"GO:0042058"}


id: PBO:0074876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 58A","termid":"PBO:0074876"}


id: PBO:0046291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial membrane protein 1","termid":"PBO:0046291"}


id: GO:0061282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules arranged along the proximal/distal axis of the mesonephric nephron acquire their identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in mesonephros development","termid":"GO:0061227"},{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"part_of","term_name":"proximal/distal pattern formation involved in mesonephric nephron development","termid":"GO:0061226"},{"relation_name":"part_of","term_name":"mesonephric nephron tubule formation","termid":"GO:0061277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of mesonephric nephron tubule identity","termid":"GO:0061282"}


id: PBO:0055188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2612","termid":"PBO:0055188"}


id: GO:0141008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transposable element silencing mechanism in which mRNAs transcribed from transposons are targeted for degradation.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposable element silencing","termid":"GO:0010526"},{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"transposable element silencing by mRNA destabilization","synonyms":[{"name":"post-transcriptional retrotransposon silencing","type":"exact"},{"name":"retrotransposon silencing by mRNA destabilization","type":"narrow"}],"termid":"GO:0141008"}


id: MONDO:1012713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epilepsy that occurs in dogs due to a mutation in the LGI2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, dog","termid":"MONDO:1010411"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign familial juvenile epilepsy, LGI2-related, dog","secondary_identifiers":["OMIA:001596-9615"],"synonyms":[{"name":"BFJE","type":"exact"},{"name":"epilepsy, benign familial juvenile, LGI2-related, dog","type":"exact"}],"termid":"MONDO:1012713","xrefs":{"Monarch":{"xref_id":"1012713"}}}


id: MONDO:0006356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive carcinoma that arises from the parotid gland. It is characterized by the presence of malignant epithelial and myoepithelial cells forming cribriform, tubular, and solid patterns. It usually presents as a slow growing mass. Patients develop pain because of the tendency of these carcinomas to invade perineural tissues.","definition_xrefs":["NCIT:C5937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma of parotid gland","termid":"MONDO:0021331"},{"relation_name":"is_a","term_name":"major salivary gland adenoid cystic carcinoma","termid":"MONDO:0045063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"parotid gland adenoid cystic carcinoma","secondary_identifiers":["EFO:1000459","SCTID:423615009","DOID:0050931","UMLS:C1335355","MEDGEN:277502"],"synonyms":[{"name":"adenoid cystic carcinoma of parotid","type":"exact"},{"name":"adenoid cystic carcinoma of parotid gland","type":"exact"},{"name":"adenoid cystic carcinoma of the parotid","type":"exact"},{"name":"adenoid cystic carcinoma of the parotid gland","type":"exact"},{"name":"parotid adenoid cystic carcinoma","type":"exact"},{"name":"parotid gland adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0006356","xrefs":{"Monarch":{"xref_id":"0006356"}}}


id: PBO:0059860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational initiation factor 3","termid":"PBO:0059860"}


id: PBO:0036157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_during_meiosis","termid":"PBO:0036157"}


id: RO:0002638
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of endoparasite-of in which the parasite inhabits the spaces between host cells.","direct_ancestors":[{"relation_name":"is_a","term_name":"endoparasite_of","termid":"RO:0002634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intercellular_endoparasite_of","termid":"RO:0002638"}


id: PBO:0053386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 313","termid":"PBO:0053386"}


id: PBO:0083619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1-like protein that activates Urm1p before urmylation; also acts in thiolation of the wobble base of cytoplasmic tRNAs by adenylating and then thiolating Urm1p; receives sulfur from Tum1p","termid":"PBO:0083619"}


id: PATO:0000738
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000738 enzyme function value (obsolete PATO:0000738)","termid":"PATO:0000738"}


id: PBO:0057351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 545","termid":"PBO:0057351"}


id: PBO:0091036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pal1 family early clathrin mediated endocytosis factor, meiosis specific Pal2","termid":"PBO:0091036"}


id: GO:0102348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: behenoyl-CoA + NADP = trans-2-docosenoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-docosan-2-enoyl-CoA reductase activity (obsolete GO:0102348)","termid":"GO:0102348"}


id: PBO:0038447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine and arginine rich domain containing protein","termid":"PBO:0038447"}


id: PBO:0034806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin (predicted)","termid":"PBO:0034806"}


id: PR:Q9P6I2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytosolic non-specific dipeptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11014:SF15","PRO:DNx","OMA:SCHPO02354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cys-Gly metallodipeptidase dug1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.08","secondary_identifiers":["UniProtKB:Q9P6I2"],"synonyms":[{"name":"GSH degradosomal complex subunit DUG1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CNDP2","type":"exact"}],"termid":"PR:Q9P6I2"}


id: GO:0007626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotory behavior","synonyms":[{"name":"behavior via locomotion","type":"exact"},{"name":"locomotion in response to stimulus","type":"exact"},{"name":"locomotory behavioral response to stimulus","type":"exact"},{"name":"locomotory behaviour","type":"exact"},{"name":"locomotory behavioural response to stimulus","type":"exact"}],"termid":"GO:0007626"}


id: MONDO:1010060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pheochromocytoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheochromocytoma, non-human animal","secondary_identifiers":["OMIA:001268"],"termid":"MONDO:1010060","xrefs":{"Monarch":{"xref_id":"1010060"}}}


id: GO:0106212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which centromeres dissociate from the spindle pole body, contributing to the rearrangement of chromosomes into the orientation characteristic of meiotic prophase I.","definition_xrefs":["PMID:27611693","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"centromere detachment from spindle pole body involved in meiotic chromosome organization","synonyms":[{"name":"centromere detachment from SPB involved in meiotic chromosome organization","type":"exact"},{"name":"centromere detachment from spindle pole body involved in chromosome organization involved in meiotic cell cycle","type":"exact"}],"termid":"GO:0106212"}


id: PR:O13698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A malonyl-CoA-acyl carrier protein transacylase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01650","PANTHER:PTHR10982:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl CoA-acyl carrier protein transacylase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.05c","secondary_identifiers":["UniProtKB:O13698"],"synonyms":[{"name":"MCT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MCAT","type":"exact"},{"name":"malonyl-CoA:ACP transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13698"}


id: MONDO:0019483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methotrexate-associated lymphoproliferative disorders are rare immunodeficiency-associated lymphoproliferative diseases characterized by lymphoid proliferation or lymphomas (large B-cell lymphoma, T-cell lymphoma, Hodgkin lymphoma, reactive lymphadenitis and a polymorphic post-transplant lymphoproliferative disorder) that develop in patients with different autoimmune diseases treated with methotrexate. Swelling is the predominant manifestation of the disease and regression after methotrexate withdrawal is observed in a significant proportion of patients.","definition_xrefs":["Orphanet:86904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"immunodeficiency-associated lymphoproliferative disease","termid":"MONDO:0020083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"methotrexate-associated lymphoproliferative disorders","secondary_identifiers":["NCIT:C7184","MEDGEN:233702","UMLS:C1334749","DOID:5821","icd11.foundation:1520483526","GARD:19083"],"synonyms":[{"name":"MTX-LPD","type":"exact"},{"name":"MTX-associated lymphoproliferative disorders","type":"exact"},{"name":"methotrexate-associated lymphoproliferation","type":"exact"},{"name":"methotrexate-associated lymphoproliferative disorder","type":"exact"}],"termid":"MONDO:0019483","xrefs":{"Monarch":{"xref_id":"0019483"}}}


